I: pbuilder: network access will be disabled during build I: Current time: Tue Feb 24 03:40:29 -12 2026 I: pbuilder-time-stamp: 1771947629 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [openms_2.6.0+cleaned1-4.dsc] I: copying [./openms_2.6.0+cleaned1.orig.tar.gz] I: copying [./openms_2.6.0+cleaned1-4.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./openms_2.6.0+cleaned1-4.dsc: unsupported subcommand dpkg-source: info: extracting openms in openms-2.6.0+cleaned1 dpkg-source: info: unpacking openms_2.6.0+cleaned1.orig.tar.gz dpkg-source: info: unpacking openms_2.6.0+cleaned1-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying sonameAndNameLinkSkipCmakeBuildSystem.patch dpkg-source: info: applying installDirsSettingsCmakeBuildSystem.patch dpkg-source: info: applying fix-glpk-version-check.patch dpkg-source: info: applying add_missing_boost_header.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/75362/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='3319494a68424d638a2f8bf3cca10748' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='75362' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.2bSMkmVl/pbuilderrc_JasY --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.2bSMkmVl/b1 --logfile b1/build.log openms_2.6.0+cleaned1-4.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos16-i386 6.1.0-30-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.124-1 (2025-01-12) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/75362/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), dh-exec (>= 0.3), dpkg-dev (>= 1.19.7), cmake (>= 3.1.2), libxerces-c-dev (>= 3.2.2), libeigen3-dev, libwildmagic-dev (>= 5.17), libboost-dev, libboost-iostreams-dev, libboost-date-time-dev, libboost-math-dev, libsqlite3-dev, libsvm-dev (>= 3.21), libglpk-dev (>= 4.65), zlib1g-dev (>= 1.2.7), libbz2-dev (>= 1.0.6), cppcheck (>= 1.54), qtbase5-dev (>= 5.11.3), libqt5opengl5-dev (>= 5.11.3), libqt5svg5-dev (>= 5.11.3), coinor-libcbc-dev (>= 2.9.9), coinor-libcgl-dev (>= 0.59.10), libhdf5-dev, imagemagick, doxygen (>= 1.8.13), graphviz, texlive-extra-utils, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-extra, texlive-font-utils, texlive-plain-generic, tex-gyre, ghostscript, texlive-fonts-recommended dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19842 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-exec (>= 0.3); however: Package dh-exec is not installed. pbuilder-satisfydepends-dummy depends on cmake (>= 3.1.2); however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libxerces-c-dev (>= 3.2.2); however: Package libxerces-c-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev; however: Package libeigen3-dev is not installed. pbuilder-satisfydepends-dummy depends on libwildmagic-dev (>= 5.17); however: Package libwildmagic-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev; however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev; however: Package libboost-iostreams-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-date-time-dev; however: Package libboost-date-time-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-math-dev; however: Package libboost-math-dev is not installed. pbuilder-satisfydepends-dummy depends on libsqlite3-dev; however: Package libsqlite3-dev is not installed. pbuilder-satisfydepends-dummy depends on libsvm-dev (>= 3.21); however: Package libsvm-dev is not installed. pbuilder-satisfydepends-dummy depends on libglpk-dev (>= 4.65); however: Package libglpk-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev (>= 1.2.7); however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libbz2-dev (>= 1.0.6); however: Package libbz2-dev is not installed. pbuilder-satisfydepends-dummy depends on cppcheck (>= 1.54); however: Package cppcheck is not installed. pbuilder-satisfydepends-dummy depends on qtbase5-dev (>= 5.11.3); however: Package qtbase5-dev is not installed. pbuilder-satisfydepends-dummy depends on libqt5opengl5-dev (>= 5.11.3); however: Package libqt5opengl5-dev is not installed. pbuilder-satisfydepends-dummy depends on libqt5svg5-dev (>= 5.11.3); however: Package libqt5svg5-dev is not installed. pbuilder-satisfydepends-dummy depends on coinor-libcbc-dev (>= 2.9.9); however: Package coinor-libcbc-dev is not installed. pbuilder-satisfydepends-dummy depends on coinor-libcgl-dev (>= 0.59.10); however: Package coinor-libcgl-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. pbuilder-satisfydepends-dummy depends on imagemagick; however: Package imagemagick is not installed. pbuilder-satisfydepends-dummy depends on doxygen (>= 1.8.13); however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on graphviz; however: Package graphviz is not installed. pbuilder-satisfydepends-dummy depends on texlive-extra-utils; however: Package texlive-extra-utils is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-extra; however: Package texlive-latex-extra is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-recommended; however: Package texlive-latex-recommended is not installed. pbuilder-satisfydepends-dummy depends on texlive-fonts-extra; however: Package texlive-fonts-extra is not installed. pbuilder-satisfydepends-dummy depends on texlive-font-utils; however: Package texlive-font-utils is not installed. pbuilder-satisfydepends-dummy depends on texlive-plain-generic; however: Package texlive-plain-generic is not installed. pbuilder-satisfydepends-dummy depends on tex-gyre; however: Package tex-gyre is not installed. pbuilder-satisfydepends-dummy depends on ghostscript; however: Package ghostscript is not installed. pbuilder-satisfydepends-dummy depends on texlive-fonts-recommended; however: Package texlive-fonts-recommended is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} coinor-libcbc-dev{a} coinor-libcbc3.1{a} coinor-libcgl-dev{a} coinor-libcgl1{a} coinor-libclp-dev{a} coinor-libclp1{a} coinor-libcoinutils-dev{a} coinor-libcoinutils3v5{a} coinor-libosi-dev{a} coinor-libosi1v5{a} comerr-dev{a} cppcheck{a} debhelper{a} dh-autoreconf{a} dh-exec{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lmodern{a} fonts-urw-base35{a} gettext{a} gettext-base{a} ghostscript{a} graphviz{a} groff-base{a} hdf5-helpers{a} hicolor-icon-theme{a} icu-devtools{a} imagemagick{a} imagemagick-7-common{a} imagemagick-7.q16{a} intltool-debian{a} krb5-multidev{a} libabsl20230802{a} libaec-dev{a} libaec0{a} libamd3{a} libaom3{a} libapache-pom-java{a} libarchive-zip-perl{a} libarchive13t64{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libavif16{a} libblas-dev{a} libblas3{a} libboost-date-time-dev{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-math-dev{a} libboost-math1.83-dev{a} libboost-math1.83.0{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost1.83-dev{a} libbrotli-dev{a} libbrotli1{a} libbtf2{a} libbz2-dev{a} libcairo2{a} libcamd3{a} libccolamd3{a} libcdt5{a} libcgraph6{a} libcholmod5{a} libclang-cpp19{a} libclang1-19{a} libcolamd3{a} libcom-err2{a} libcommons-logging-java{a} libcommons-parent-java{a} libcups2t64{a} libcurl3t64-gnutls{a} libcurl4-openssl-dev{a} libcurl4t64{a} libcxsparse4{a} libdatrie1{a} libdav1d7{a} libdbus-1-3{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libdouble-conversion3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libegl-dev{a} libegl-mesa0{a} libegl1{a} libeigen3-dev{a} libelf1t64{a} libevdev2{a} libevent-2.1-7t64{a} libexpat1{a} libffi8{a} libfftw3-double3{a} libfile-homedir-perl{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfmt10{a} libfontbox-java{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgbm1{a} libgd3{a} libgfortran5{a} libgl-dev{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglib2.0-0t64{a} libglpk-dev{a} libglpk40{a} libglu1-mesa{a} libglu1-mesa-dev{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgnutls30t64{a} libgraphite2-3{a} libgs-common{a} libgs10{a} libgs10-common{a} libgssapi-krb5-2{a} libgssrpc4t64{a} libgts-0.7-5t64{a} libgudev-1.0-0{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libhdf5-310{a} libhdf5-cpp-310{a} libhdf5-dev{a} libhdf5-fortran-310{a} libhdf5-hl-310{a} libhdf5-hl-cpp-310{a} libhdf5-hl-fortran-310{a} libheif-plugin-dav1d{a} libheif-plugin-libde265{a} libheif1{a} libice6{a} libicu-dev{a} libicu72{a} libidn12{a} libidn2-0{a} libidn2-dev{a} libijs-0.35{a} libimagequant0{a} libinput-bin{a} libinput10{a} libjbig0{a} libjbig2dec0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjsoncpp26{a} libk5crypto3{a} libkadm5clnt-mit12{a} libkadm5srv-mit12{a} libkdb5-10t64{a} libkeyutils1{a} libklu2{a} libkpathsea6{a} libkrb5-3{a} libkrb5-dev{a} libkrb5support0{a} liblab-gamut1{a} liblapack-dev{a} liblapack3{a} liblcms2-2{a} libldap-dev{a} libldap2{a} libldl3{a} liblerc4{a} libllvm19{a} liblqr-1-0{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmagickcore-7.q16-10{a} libmagickwand-7.q16-10{a} libmd4c0{a} libmime-charset-perl{a} libmpfi0{a} libmtdev1t64{a} libnghttp2-14{a} libnghttp2-dev{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libnsl2{a} libopengl-dev{a} libopengl0{a} libopenjp2-7{a} libp11-kit-dev{a} libp11-kit0{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper2{a} libparu1{a} libpathplan4{a} libpciaccess0{a} libpcre2-16-0{a} libpdfbox-java{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng16-16t64{a} libpotrace0{a} libproc2-0{a} libpsl-dev{a} libpsl5t64{a} libptexenc1{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libqt5concurrent5t64{a} libqt5core5t64{a} libqt5dbus5t64{a} libqt5gui5t64{a} libqt5network5t64{a} libqt5opengl5-dev{a} libqt5opengl5t64{a} libqt5printsupport5t64{a} libqt5sql5t64{a} libqt5svg5{a} libqt5svg5-dev{a} libqt5test5t64{a} libqt5widgets5t64{a} libqt5xml5t64{a} libraqm0{a} librav1e0.7{a} libraw23t64{a} librbio4{a} libreadline8t64{a} librhash1{a} librtmp-dev{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsharpyuv0{a} libsm6{a} libsombok3{a} libspex3{a} libspqr4{a} libsqlite3-dev{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libsuitesparse-dev{a} libsuitesparse-mongoose3{a} libsuitesparseconfig7{a} libsvm-dev{a} libsvm3{a} libsvtav1enc2{a} libsynctex2{a} libsz2{a} libtasn1-6{a} libtasn1-6-dev{a} libteckit0{a} libtexlua53-5{a} libtext-charwidth-perl{a} libtext-wrapi18n-perl{a} libthai-data{a} libthai0{a} libtiff6{a} libtinyxml2-10{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libumfpack6{a} libunbound8{a} libunicode-linebreak-perl{a} libunistring5{a} libuv1t64{a} libvulkan-dev{a} libvulkan1{a} libwacom-common{a} libwacom9{a} libwayland-client0{a} libwayland-server0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libwildmagic-common{a} libwildmagic-dev{a} libwildmagic5{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxaw7{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-shape0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-util1{a} libxcb-xfixes0{a} libxcb-xinerama0{a} libxcb-xinput0{a} libxcb-xkb1{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxerces-c-dev{a} libxerces-c3.2t64{a} libxext-dev{a} libxext6{a} libxfixes3{a} libxi6{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxshmfence1{a} libxt6t64{a} libxxf86vm1{a} libyaml-tiny-perl{a} libyuv0{a} libz3-4{a} libzstd-dev{a} libzzip-0-13t64{a} lmodern{a} m4{a} man-db{a} media-types{a} mesa-libgallium{a} netbase{a} nettle-dev{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} poppler-data{a} preview-latex-style{a} procps{a} python3{a} python3-minimal{a} python3-pygments{a} python3.12{a} python3.12-minimal{a} qt5-qmake{a} qt5-qmake-bin{a} qtbase5-dev{a} qtbase5-dev-tools{a} qtchooser{a} readline-common{a} sensible-utils{a} shared-mime-info{a} t1utils{a} tex-common{a} tex-gyre{a} texlive-base{a} texlive-binaries{a} texlive-extra-utils{a} texlive-font-utils{a} texlive-fonts-extra{a} texlive-fonts-recommended{a} texlive-latex-base{a} texlive-latex-extra{a} texlive-latex-recommended{a} texlive-luatex{a} texlive-pictures{a} texlive-plain-generic{a} tzdata{a} ucf{a} x11-common{a} x11proto-dev{a} xdg-utils{a} xfonts-encodings{a} xfonts-utils{a} xkb-data{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc ca-certificates cm-super curl dbus default-jre dvisvgm fonts-adf-accanthis fonts-adf-berenis fonts-adf-gillius fonts-adf-universalis fonts-cabin fonts-cantarell fonts-clear-sans fonts-comfortaa fonts-comic-neue fonts-croscore fonts-crosextra-caladea fonts-crosextra-carlito fonts-dejavu-extra fonts-droid-fallback fonts-ebgaramond-extra fonts-font-awesome fonts-freefont-otf fonts-freefont-ttf fonts-gfs-artemisia fonts-gfs-complutum fonts-gfs-didot fonts-gfs-neohellenic fonts-gfs-olga fonts-gfs-solomos fonts-go fonts-inter fonts-lato fonts-liberation fonts-linuxlibertine fonts-lobstertwo fonts-noto-color-emoji fonts-noto-core fonts-noto-mono fonts-oflb-asana-math fonts-open-sans fonts-paratype fonts-roboto-slab fonts-roboto-unhinted fonts-sil-andika fonts-sil-charis fonts-sil-gentium fonts-sil-gentium-basic fonts-sil-gentiumplus fonts-sil-gentiumplus-compact fonts-stix fonts-texgyre fonts-texgyre-math javascript-common krb5-locales libarchive-cpio-perl libfile-mimeinfo-perl libglib2.0-data libgraphblas-dev libgts-bin libheif-plugin-aomenc libheif-plugin-x265 libldap-common liblog-log4perl-perl libltdl-dev libmagickcore-7.q16-10-extra libmail-sendmail-perl libnet-dbus-perl libqt5sql5-ibase libqt5sql5-mysql libqt5sql5-odbc libqt5sql5-psql libqt5sql5-sqlite libqt5sql5-tds libsasl2-modules libspreadsheet-parseexcel-perl libtasn1-doc libx11-protocol-perl linux-sysctl-defaults lynx mesa-vulkan-drivers netpbm ps2eps psmisc publicsuffix qt5-gtk-platformtheme qttranslations5-l10n qtwayland5 ruby texlive-fonts-extra-links tipa tk wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 425 newly installed, 0 to remove and 0 not upgraded. Need to get 1144 MB of archives. After unpacking 3622 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 libfftw3-double3 i386 3.3.10-2+b1 [629 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libexpat1 i386 2.6.4-1 [107 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 libbrotli1 i386 1.1.0-2+b6 [308 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 libpng16-16t64 i386 1.6.44-3 [288 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 libfreetype6 i386 2.13.3+dfsg-1 [464 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 libfontenc1 i386 1:1.1.8-1+b2 [23.4 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 x11-common all 1:7.7+23.2 [216 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 xfonts-utils i386 1:7.7+7 [95.1 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 fonts-urw-base35 all 20200910-8 [10.8 MB] Get: 13 http://deb.debian.org/debian trixie/main i386 fontconfig-config i386 2.15.0-2 [317 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 libfontconfig1 i386 2.15.0-2 [402 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 libsharpyuv0 i386 1.5.0-0.1 [115 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 libdav1d7 i386 1.5.0-1+b1 [327 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 libheif-plugin-dav1d i386 1.19.5-1 [11.5 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 libde265-0 i386 1.0.15-1+b2 [199 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libheif-plugin-libde265 i386 1.19.5-1 [16.0 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 libheif1 i386 1.19.5-1 [540 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 libjbig0 i386 2.1-6.1+b2 [32.2 kB] Get: 22 http://deb.debian.org/debian trixie/main i386 libjpeg62-turbo i386 1:2.1.5-3+b1 [171 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 liblcms2-2 i386 2.16-2 [171 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 libffi8 i386 3.4.6-1 [21.2 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 libglib2.0-0t64 i386 2.82.4-2 [1573 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 liblqr-1-0 i386 0.4.2-2.1+b2 [32.0 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 libltdl7 i386 2.5.4-2 [417 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 libopenjp2-7 i386 2.5.0-2+b4 [210 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 libraw23t64 i386 0.21.3-1+b1 [409 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 libdeflate0 i386 1.23-1+b1 [48.4 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 liblerc4 i386 4.0.0+ds-5 [191 kB] Get: 32 http://deb.debian.org/debian trixie/main i386 libwebp7 i386 1.5.0-0.1 [329 kB] Get: 33 http://deb.debian.org/debian trixie/main i386 libtiff6 i386 4.5.1+git230720-5 [339 kB] Get: 34 http://deb.debian.org/debian trixie/main i386 libwebpdemux2 i386 1.5.0-0.1 [114 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 libwebpmux3 i386 1.5.0-0.1 [127 kB] Get: 36 http://deb.debian.org/debian trixie/main i386 libxau6 i386 1:1.0.11-1 [20.7 kB] Get: 37 http://deb.debian.org/debian trixie/main i386 libxdmcp6 i386 1:1.1.5-1 [28.2 kB] Get: 38 http://deb.debian.org/debian trixie/main i386 libxcb1 i386 1.17.0-2+b1 [148 kB] Get: 39 http://deb.debian.org/debian trixie/main i386 libx11-data all 2:1.8.10-2 [337 kB] Get: 40 http://deb.debian.org/debian trixie/main i386 libx11-6 i386 2:1.8.10-2 [834 kB] Get: 41 http://deb.debian.org/debian trixie/main i386 libxext6 i386 2:1.3.4-1+b3 [52.5 kB] Get: 42 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-6 [9582 kB] Get: 43 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b1 [734 kB] Get: 44 http://deb.debian.org/debian trixie/main i386 imagemagick-7-common all 8:7.1.1.43+dfsg1-1 [67.4 kB] Get: 45 http://deb.debian.org/debian trixie/main i386 libmagickcore-7.q16-10 i386 8:7.1.1.43+dfsg1-1 [1891 kB] Get: 46 http://deb.debian.org/debian trixie/main i386 libmagickwand-7.q16-10 i386 8:7.1.1.43+dfsg1-1 [324 kB] Get: 47 http://deb.debian.org/debian trixie/main i386 poppler-data all 0.4.12-1 [1601 kB] Get: 48 http://deb.debian.org/debian trixie/main i386 libpython3.12-minimal i386 3.12.8-5 [816 kB] Get: 49 http://deb.debian.org/debian trixie/main i386 python3.12-minimal i386 3.12.8-5 [2241 kB] Get: 50 http://deb.debian.org/debian trixie/main i386 python3-minimal i386 3.12.8-1 [26.9 kB] Get: 51 http://deb.debian.org/debian trixie/main i386 media-types all 10.1.0 [26.9 kB] Get: 52 http://deb.debian.org/debian trixie/main i386 netbase all 6.4 [12.8 kB] Get: 53 http://deb.debian.org/debian trixie/main i386 tzdata all 2024b-6 [257 kB] Get: 54 http://deb.debian.org/debian trixie/main i386 libkrb5support0 i386 1.21.3-3 [34.9 kB] Get: 55 http://deb.debian.org/debian trixie/main i386 libcom-err2 i386 1.47.2-1 [24.3 kB] Get: 56 http://deb.debian.org/debian trixie/main i386 libk5crypto3 i386 1.21.3-3 [83.6 kB] Get: 57 http://deb.debian.org/debian trixie/main i386 libkeyutils1 i386 1.6.3-4 [9600 B] Get: 58 http://deb.debian.org/debian trixie/main i386 libkrb5-3 i386 1.21.3-3 [350 kB] Get: 59 http://deb.debian.org/debian trixie/main i386 libgssapi-krb5-2 i386 1.21.3-3 [146 kB] Get: 60 http://deb.debian.org/debian trixie/main i386 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 61 http://deb.debian.org/debian trixie/main i386 libtirpc3t64 i386 1.3.4+ds-1.3+b1 [90.5 kB] Get: 62 http://deb.debian.org/debian trixie/main i386 libnsl2 i386 1.3.0-3+b3 [42.7 kB] Get: 63 http://deb.debian.org/debian trixie/main i386 readline-common all 8.2-6 [69.4 kB] Get: 64 http://deb.debian.org/debian trixie/main i386 libreadline8t64 i386 8.2-6 [173 kB] Get: 65 http://deb.debian.org/debian trixie/main i386 libpython3.12-stdlib i386 3.12.8-5 [1969 kB] Get: 66 http://deb.debian.org/debian trixie/main i386 python3.12 i386 3.12.8-5 [677 kB] Get: 67 http://deb.debian.org/debian trixie/main i386 libpython3-stdlib i386 3.12.8-1 [9792 B] Get: 68 http://deb.debian.org/debian trixie/main i386 python3 i386 3.12.8-1 [27.9 kB] Get: 69 http://deb.debian.org/debian trixie/main i386 libproc2-0 i386 2:4.0.4-6 [65.7 kB] Get: 70 http://deb.debian.org/debian trixie/main i386 procps i386 2:4.0.4-6 [876 kB] Get: 71 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 72 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 73 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 74 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 75 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.22.5-4 [201 kB] Get: 76 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 77 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-7 [1199 kB] Get: 78 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40.4-1 [96.1 kB] Get: 79 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 80 http://deb.debian.org/debian trixie/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 81 http://deb.debian.org/debian trixie/main i386 libtext-charwidth-perl i386 0.04-11+b4 [9656 B] Get: 82 http://deb.debian.org/debian trixie/main i386 libtext-wrapi18n-perl all 0.06-10 [8808 B] Get: 83 http://deb.debian.org/debian trixie/main i386 ucf all 3.0048 [42.0 kB] Get: 84 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-5 [301 kB] Get: 85 http://deb.debian.org/debian trixie/main i386 autoconf all 2.72-3 [493 kB] Get: 86 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 87 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 88 http://deb.debian.org/debian trixie/main i386 autopoint all 0.22.5-4 [723 kB] Get: 89 http://deb.debian.org/debian trixie/main i386 cmake-data all 3.31.4-2 [2267 kB] Get: 90 http://deb.debian.org/debian trixie/main i386 libarchive13t64 i386 3.7.4-1.1 [390 kB] Get: 91 http://deb.debian.org/debian trixie/main i386 libunistring5 i386 1.3-1 [458 kB] Get: 92 http://deb.debian.org/debian trixie/main i386 libidn2-0 i386 2.3.7-2+b1 [130 kB] Get: 93 http://deb.debian.org/debian trixie/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-8+b1 [20.9 kB] Get: 94 http://deb.debian.org/debian trixie/main i386 libsasl2-2 i386 2.1.28+dfsg1-8+b1 [61.3 kB] Get: 95 http://deb.debian.org/debian trixie/main i386 libldap2 i386 2.6.9+dfsg-1 [205 kB] Get: 96 http://deb.debian.org/debian trixie/main i386 libnghttp2-14 i386 1.64.0-1 [82.4 kB] Get: 97 http://deb.debian.org/debian trixie/main i386 libpsl5t64 i386 0.21.2-1.1+b1 [57.7 kB] Get: 98 http://deb.debian.org/debian trixie/main i386 libp11-kit0 i386 0.25.5-3 [423 kB] Get: 99 http://deb.debian.org/debian trixie/main i386 libtasn1-6 i386 4.19.0-3+b3 [51.1 kB] Get: 100 http://deb.debian.org/debian trixie/main i386 libgnutls30t64 i386 3.8.8-2 [1451 kB] Get: 101 http://deb.debian.org/debian trixie/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b5 [62.4 kB] Get: 102 http://deb.debian.org/debian trixie/main i386 libssh2-1t64 i386 1.11.1-1 [256 kB] Get: 103 http://deb.debian.org/debian trixie/main i386 libcurl4t64 i386 8.11.1-1+b1 [393 kB] Get: 104 http://deb.debian.org/debian trixie/main i386 libjsoncpp26 i386 1.9.6-3 [90.0 kB] Get: 105 http://deb.debian.org/debian trixie/main i386 librhash1 i386 1.4.5-1 [144 kB] Get: 106 http://deb.debian.org/debian trixie/main i386 libuv1t64 i386 1.48.0-7 [157 kB] Get: 107 http://deb.debian.org/debian trixie/main i386 cmake i386 3.31.4-2 [13.1 MB] Get: 108 http://deb.debian.org/debian trixie/main i386 libblas3 i386 3.12.0-4 [143 kB] Get: 109 http://deb.debian.org/debian trixie/main i386 libgfortran5 i386 14.2.0-12 [735 kB] Get: 110 http://deb.debian.org/debian trixie/main i386 liblapack3 i386 3.12.0-4 [2194 kB] Get: 111 http://deb.debian.org/debian trixie/main i386 coinor-libcoinutils3v5 i386 2.11.11+ds-2 [484 kB] Get: 112 http://deb.debian.org/debian trixie/main i386 coinor-libosi1v5 i386 0.108.10+ds-1+b1 [299 kB] Get: 113 http://deb.debian.org/debian trixie/main i386 coinor-libclp1 i386 1.17.10+ds-1 [885 kB] Get: 114 http://deb.debian.org/debian trixie/main i386 coinor-libcgl1 i386 0.60.9+ds-1 [429 kB] Get: 115 http://deb.debian.org/debian trixie/main i386 coinor-libcbc3.1 i386 2.10.12+ds-1 [744 kB] Get: 116 http://deb.debian.org/debian trixie/main i386 libbz2-dev i386 1.0.8-6 [32.1 kB] Get: 117 http://deb.debian.org/debian trixie/main i386 libblas-dev i386 3.12.0-4 [155 kB] Get: 118 http://deb.debian.org/debian trixie/main i386 liblapack-dev i386 3.12.0-4 [4452 kB] Get: 119 http://deb.debian.org/debian trixie/main i386 coinor-libcoinutils-dev i386 2.11.11+ds-2 [685 kB] Get: 120 http://deb.debian.org/debian trixie/main i386 coinor-libosi-dev i386 0.108.10+ds-1+b1 [371 kB] Get: 121 http://deb.debian.org/debian trixie/main i386 coinor-libclp-dev i386 1.17.10+ds-1 [1080 kB] Get: 122 http://deb.debian.org/debian trixie/main i386 coinor-libcgl-dev i386 0.60.9+ds-1 [543 kB] Get: 123 http://deb.debian.org/debian trixie/main i386 coinor-libcbc-dev i386 2.10.12+ds-1 [906 kB] Get: 124 http://deb.debian.org/debian trixie/main i386 comerr-dev i386 2.1-1.47.2-1 [56.2 kB] Get: 125 http://deb.debian.org/debian trixie/main i386 libtinyxml2-10 i386 10.0.0+dfsg-2+b2 [33.3 kB] Get: 126 http://deb.debian.org/debian trixie/main i386 python3-pygments all 2.18.0+dfsg-2 [836 kB] Get: 127 http://deb.debian.org/debian trixie/main i386 cppcheck i386 2.16.0-1 [2529 kB] Get: 128 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.23 [90.6 kB] Get: 129 http://deb.debian.org/debian trixie/main i386 libtool all 2.5.4-2 [539 kB] Get: 130 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 131 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 132 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 133 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 134 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 135 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 136 http://deb.debian.org/debian trixie/main i386 gettext i386 0.22.5-4 [1632 kB] Get: 137 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 138 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 139 http://deb.debian.org/debian trixie/main i386 debhelper all 13.23 [919 kB] Get: 140 http://deb.debian.org/debian trixie/main i386 dh-exec i386 0.30 [26.2 kB] Get: 141 http://deb.debian.org/debian trixie/main i386 libedit2 i386 3.1-20250104-1 [98.1 kB] Get: 142 http://deb.debian.org/debian trixie/main i386 libz3-4 i386 4.13.3-1 [9211 kB] Get: 143 http://deb.debian.org/debian trixie/main i386 libllvm19 i386 1:19.1.6-1+b1 [30.3 MB] Get: 144 http://deb.debian.org/debian trixie/main i386 libclang-cpp19 i386 1:19.1.6-1+b1 [15.5 MB] Get: 145 http://deb.debian.org/debian trixie/main i386 libclang1-19 i386 1:19.1.6-1+b1 [9000 kB] Get: 146 http://deb.debian.org/debian trixie/main i386 libfmt10 i386 10.1.1+ds1-4 [134 kB] Get: 147 http://deb.debian.org/debian trixie/main i386 doxygen i386 1.9.8+ds-2+b3 [5225 kB] Get: 148 http://deb.debian.org/debian trixie/main i386 fontconfig i386 2.15.0-2 [463 kB] Get: 149 http://deb.debian.org/debian trixie/main i386 fonts-lmodern all 2.005-1 [4540 kB] Get: 150 http://deb.debian.org/debian trixie/main i386 libgs-common all 10.04.0~dfsg-2 [148 kB] Get: 151 http://deb.debian.org/debian trixie/main i386 libgs10-common all 10.04.0~dfsg-2 [475 kB] Get: 152 http://deb.debian.org/debian trixie/main i386 libavahi-common-data i386 0.8-16 [112 kB] Get: 153 http://deb.debian.org/debian trixie/main i386 libavahi-common3 i386 0.8-16 [46.4 kB] Get: 154 http://deb.debian.org/debian trixie/main i386 libdbus-1-3 i386 1.16.0-1 [190 kB] Get: 155 http://deb.debian.org/debian trixie/main i386 libavahi-client3 i386 0.8-16 [50.4 kB] Get: 156 http://deb.debian.org/debian trixie/main i386 libcups2t64 i386 2.4.10-2+b1 [267 kB] Get: 157 http://deb.debian.org/debian trixie/main i386 libidn12 i386 1.42-2+b1 [82.2 kB] Get: 158 http://deb.debian.org/debian trixie/main i386 libijs-0.35 i386 0.35-15.1+b2 [15.7 kB] Get: 159 http://deb.debian.org/debian trixie/main i386 libjbig2dec0 i386 0.20-1+b3 [67.0 kB] Get: 160 http://deb.debian.org/debian trixie/main i386 libpaper2 i386 2.2.5-0.3 [16.8 kB] Get: 161 http://deb.debian.org/debian trixie/main i386 libice6 i386 2:1.1.1-1 [67.8 kB] Get: 162 http://deb.debian.org/debian trixie/main i386 libsm6 i386 2:1.2.4-1 [35.9 kB] Get: 163 http://deb.debian.org/debian trixie/main i386 libxt6t64 i386 1:1.2.1-1.2+b2 [194 kB] Get: 164 http://deb.debian.org/debian trixie/main i386 libgs10 i386 10.04.0~dfsg-2+b1 [2707 kB] Get: 165 http://deb.debian.org/debian trixie/main i386 ghostscript i386 10.04.0~dfsg-2+b1 [51.0 kB] Get: 166 http://deb.debian.org/debian trixie/main i386 libcdt5 i386 2.42.4-2+b1 [40.9 kB] Get: 167 http://deb.debian.org/debian trixie/main i386 libcgraph6 i386 2.42.4-2+b1 [68.2 kB] Get: 168 http://deb.debian.org/debian trixie/main i386 libaom3 i386 3.11.0-1 [1915 kB] Get: 169 http://deb.debian.org/debian trixie/main i386 libabsl20230802 i386 20230802.1-4 [521 kB] Get: 170 http://deb.debian.org/debian trixie/main i386 libgav1-1 i386 0.19.0-3 [326 kB] Get: 171 http://deb.debian.org/debian trixie/main i386 librav1e0.7 i386 0.7.1-9 [664 kB] Get: 172 http://deb.debian.org/debian trixie/main i386 libsvtav1enc2 i386 2.3.0+dfsg-1 [1053 kB] Get: 173 http://deb.debian.org/debian trixie/main i386 libyuv0 i386 0.0.1899.20250103-1 [111 kB] Get: 174 http://deb.debian.org/debian trixie/main i386 libavif16 i386 1.1.1-1 [124 kB] Get: 175 http://deb.debian.org/debian trixie/main i386 libimagequant0 i386 2.18.0-1+b2 [36.0 kB] Get: 176 http://deb.debian.org/debian trixie/main i386 libfribidi0 i386 1.0.16-1 [27.0 kB] Get: 177 http://deb.debian.org/debian trixie/main i386 libgraphite2-3 i386 1.3.14-2+b1 [77.8 kB] Get: 178 http://deb.debian.org/debian trixie/main i386 libharfbuzz0b i386 10.2.0-1 [504 kB] Get: 179 http://deb.debian.org/debian trixie/main i386 libraqm0 i386 0.10.2-1 [14.6 kB] Get: 180 http://deb.debian.org/debian trixie/main i386 libxpm4 i386 1:3.5.17-1+b3 [58.3 kB] Get: 181 http://deb.debian.org/debian trixie/main i386 libgd3 i386 2.3.3-12+b1 [131 kB] Get: 182 http://deb.debian.org/debian trixie/main i386 libgts-0.7-5t64 i386 0.7.6+darcs121130-5.2+b1 [160 kB] Get: 183 http://deb.debian.org/debian trixie/main i386 libpixman-1-0 i386 0.44.0-3 [246 kB] Get: 184 http://deb.debian.org/debian trixie/main i386 libxcb-render0 i386 1.17.0-2+b1 [116 kB] Get: 185 http://deb.debian.org/debian trixie/main i386 libxcb-shm0 i386 1.17.0-2+b1 [105 kB] Get: 186 http://deb.debian.org/debian trixie/main i386 libxrender1 i386 1:0.9.10-1.1+b3 [28.8 kB] Get: 187 http://deb.debian.org/debian trixie/main i386 libcairo2 i386 1.18.2-2 [591 kB] Get: 188 http://deb.debian.org/debian trixie/main i386 libthai-data all 0.1.29-2 [168 kB] Get: 189 http://deb.debian.org/debian trixie/main i386 libdatrie1 i386 0.2.13-3+b1 [39.9 kB] Get: 190 http://deb.debian.org/debian trixie/main i386 libthai0 i386 0.1.29-2+b1 [50.3 kB] Get: 191 http://deb.debian.org/debian trixie/main i386 libpango-1.0-0 i386 1.56.1-1 [234 kB] Get: 192 http://deb.debian.org/debian trixie/main i386 libpangoft2-1.0-0 i386 1.56.1-1 [59.1 kB] Get: 193 http://deb.debian.org/debian trixie/main i386 libpangocairo-1.0-0 i386 1.56.1-1 [36.8 kB] Get: 194 http://deb.debian.org/debian trixie/main i386 libpathplan4 i386 2.42.4-2+b1 [42.8 kB] Get: 195 http://deb.debian.org/debian trixie/main i386 libgvc6 i386 2.42.4-2+b1 [717 kB] Get: 196 http://deb.debian.org/debian trixie/main i386 libgvpr2 i386 2.42.4-2+b1 [203 kB] Get: 197 http://deb.debian.org/debian trixie/main i386 liblab-gamut1 i386 2.42.4-2+b1 [198 kB] Get: 198 http://deb.debian.org/debian trixie/main i386 libxmu6 i386 2:1.1.3-3+b4 [60.8 kB] Get: 199 http://deb.debian.org/debian trixie/main i386 libxaw7 i386 2:1.0.16-1 [220 kB] Get: 200 http://deb.debian.org/debian trixie/main i386 graphviz i386 2.42.4-2+b1 [581 kB] Get: 201 http://deb.debian.org/debian trixie/main i386 hdf5-helpers i386 1.14.5+repack-3 [26.6 kB] Get: 202 http://deb.debian.org/debian trixie/main i386 hicolor-icon-theme all 0.18-1 [12.0 kB] Get: 203 http://deb.debian.org/debian trixie/main i386 icu-devtools i386 72.1-6 [218 kB] Get: 204 http://deb.debian.org/debian trixie/main i386 imagemagick-7.q16 i386 8:7.1.1.43+dfsg1-1 [726 kB] Get: 205 http://deb.debian.org/debian trixie/main i386 imagemagick i386 8:7.1.1.43+dfsg1-1 [20.0 kB] Get: 206 http://deb.debian.org/debian trixie/main i386 libgssrpc4t64 i386 1.21.3-3 [63.1 kB] Get: 207 http://deb.debian.org/debian trixie/main i386 libkadm5clnt-mit12 i386 1.21.3-3 [43.2 kB] Get: 208 http://deb.debian.org/debian trixie/main i386 libkdb5-10t64 i386 1.21.3-3 [45.1 kB] Get: 209 http://deb.debian.org/debian trixie/main i386 libkadm5srv-mit12 i386 1.21.3-3 [57.0 kB] Get: 210 http://deb.debian.org/debian trixie/main i386 krb5-multidev i386 1.21.3-3 [126 kB] Get: 211 http://deb.debian.org/debian trixie/main i386 libaec0 i386 1.1.3-1+b1 [25.0 kB] Get: 212 http://deb.debian.org/debian trixie/main i386 libsz2 i386 1.1.3-1+b1 [8128 B] Get: 213 http://deb.debian.org/debian trixie/main i386 libaec-dev i386 1.1.3-1+b1 [23.0 kB] Get: 214 http://deb.debian.org/debian trixie/main i386 libsuitesparseconfig7 i386 1:7.8.3+dfsg-2 [24.0 kB] Get: 215 http://deb.debian.org/debian trixie/main i386 libamd3 i386 1:7.8.3+dfsg-2 [43.5 kB] Get: 216 http://deb.debian.org/debian trixie/main i386 libapache-pom-java all 33-2 [5852 B] Get: 217 http://deb.debian.org/debian trixie/main i386 libboost1.83-dev i386 1.83.0-4 [10.6 MB] Get: 218 http://deb.debian.org/debian trixie/main i386 libboost-date-time1.83.0 i386 1.83.0-4 [230 kB] Get: 219 http://deb.debian.org/debian trixie/main i386 libboost-serialization1.83.0 i386 1.83.0-4 [343 kB] Get: 220 http://deb.debian.org/debian trixie/main i386 libboost-serialization1.83-dev i386 1.83.0-4 [386 kB] Get: 221 http://deb.debian.org/debian trixie/main i386 libboost-date-time1.83-dev i386 1.83.0-4 [239 kB] Get: 222 http://deb.debian.org/debian trixie/main i386 libboost-date-time-dev i386 1.83.0.2+b2 [3596 B] Get: 223 http://deb.debian.org/debian trixie/main i386 libboost-dev i386 1.83.0.2+b2 [3840 B] Get: 224 http://deb.debian.org/debian trixie/main i386 libboost-regex1.83.0 i386 1.83.0-4 [329 kB] Get: 225 http://deb.debian.org/debian trixie/main i386 libicu-dev i386 72.1-6 [10.6 MB] Get: 226 http://deb.debian.org/debian trixie/main i386 libboost-regex1.83-dev i386 1.83.0-4 [347 kB] Get: 227 http://deb.debian.org/debian trixie/main i386 libboost-iostreams1.83-dev i386 1.83.0-4 [264 kB] Get: 228 http://deb.debian.org/debian trixie/main i386 libboost-iostreams-dev i386 1.83.0.2+b2 [3588 B] Get: 229 http://deb.debian.org/debian trixie/main i386 libboost-math1.83.0 i386 1.83.0-4 [433 kB] Get: 230 http://deb.debian.org/debian trixie/main i386 libboost-math1.83-dev i386 1.83.0-4 [512 kB] Get: 231 http://deb.debian.org/debian trixie/main i386 libboost-math-dev i386 1.83.0.2+b2 [3800 B] Get: 232 http://deb.debian.org/debian trixie/main i386 libbrotli-dev i386 1.1.0-2+b6 [313 kB] Get: 233 http://deb.debian.org/debian trixie/main i386 libbtf2 i386 1:7.8.3+dfsg-2 [25.8 kB] Get: 234 http://deb.debian.org/debian trixie/main i386 libcamd3 i386 1:7.8.3+dfsg-2 [41.1 kB] Get: 235 http://deb.debian.org/debian trixie/main i386 libccolamd3 i386 1:7.8.3+dfsg-2 [43.2 kB] Get: 236 http://deb.debian.org/debian trixie/main i386 libcolamd3 i386 1:7.8.3+dfsg-2 [35.6 kB] Get: 237 http://deb.debian.org/debian trixie/main i386 libcholmod5 i386 1:7.8.3+dfsg-2 [733 kB] Get: 238 http://deb.debian.org/debian trixie/main i386 libcommons-parent-java all 56-1 [10.8 kB] Get: 239 http://deb.debian.org/debian trixie/main i386 libcommons-logging-java all 1.3.0-1 [68.6 kB] Get: 240 http://deb.debian.org/debian trixie/main i386 libnghttp3-9 i386 1.6.0-2 [75.9 kB] Get: 241 http://deb.debian.org/debian trixie/main i386 libngtcp2-16 i386 1.9.1-1 [151 kB] Get: 242 http://deb.debian.org/debian trixie/main i386 libngtcp2-crypto-gnutls8 i386 1.9.1-1 [19.1 kB] Get: 243 http://deb.debian.org/debian trixie/main i386 libcurl3t64-gnutls i386 8.11.1-1+b1 [404 kB] Get: 244 http://deb.debian.org/debian trixie/main i386 libidn2-dev i386 2.3.7-2+b1 [126 kB] Get: 245 http://deb.debian.org/debian trixie/main i386 libkrb5-dev i386 1.21.3-3 [15.7 kB] Get: 246 http://deb.debian.org/debian trixie/main i386 libldap-dev i386 2.6.9+dfsg-1 [328 kB] Get: 247 http://deb.debian.org/debian trixie/main i386 libpkgconf3 i386 1.8.1-4 [38.4 kB] Get: 248 http://deb.debian.org/debian trixie/main i386 pkgconf-bin i386 1.8.1-4 [30.6 kB] Get: 249 http://deb.debian.org/debian trixie/main i386 pkgconf i386 1.8.1-4 [26.2 kB] Get: 250 http://deb.debian.org/debian trixie/main i386 libnghttp2-dev i386 1.64.0-1 [123 kB] Get: 251 http://deb.debian.org/debian trixie/main i386 libpsl-dev i386 0.21.2-1.1+b1 [78.4 kB] Get: 252 http://deb.debian.org/debian trixie/main i386 libgmpxx4ldbl i386 2:6.3.0+dfsg-3 [329 kB] Get: 253 http://deb.debian.org/debian trixie/main i386 libgmp-dev i386 2:6.3.0+dfsg-3 [661 kB] Get: 254 http://deb.debian.org/debian trixie/main i386 libevent-2.1-7t64 i386 2.1.12-stable-10+b1 [195 kB] Get: 255 http://deb.debian.org/debian trixie/main i386 libunbound8 i386 1.22.0-1 [632 kB] Get: 256 http://deb.debian.org/debian trixie/main i386 libgnutls-dane0t64 i386 3.8.8-2 [447 kB] Get: 257 http://deb.debian.org/debian trixie/main i386 libgnutls-openssl27t64 i386 3.8.8-2 [447 kB] Get: 258 http://deb.debian.org/debian trixie/main i386 libp11-kit-dev i386 0.25.5-3 [208 kB] Get: 259 http://deb.debian.org/debian trixie/main i386 libtasn1-6-dev i386 4.19.0-3+b3 [102 kB] Get: 260 http://deb.debian.org/debian trixie/main i386 nettle-dev i386 3.10-1+b1 [1334 kB] Get: 261 http://deb.debian.org/debian trixie/main i386 libgnutls28-dev i386 3.8.8-2 [1453 kB] Get: 262 http://deb.debian.org/debian trixie/main i386 zlib1g-dev i386 1:1.3.dfsg+really1.3.1-1+b1 [916 kB] Get: 263 http://deb.debian.org/debian trixie/main i386 librtmp-dev i386 2.4+20151223.gitfa8646d.1-2+b5 [72.3 kB] Get: 264 http://deb.debian.org/debian trixie/main i386 libssl-dev i386 3.4.0-2 [2842 kB] Get: 265 http://deb.debian.org/debian trixie/main i386 libssh2-1-dev i386 1.11.1-1 [407 kB] Get: 266 http://deb.debian.org/debian trixie/main i386 libzstd-dev i386 1.5.6+dfsg-2 [354 kB] Get: 267 http://deb.debian.org/debian trixie/main i386 libcurl4-openssl-dev i386 8.11.1-1+b1 [522 kB] Get: 268 http://deb.debian.org/debian trixie/main i386 libcxsparse4 i386 1:7.8.3+dfsg-2 [102 kB] Get: 269 http://deb.debian.org/debian trixie/main i386 libdouble-conversion3 i386 3.3.0-1+b2 [45.7 kB] Get: 270 http://deb.debian.org/debian trixie/main i386 libdrm-common all 2.4.123-1 [8084 B] Get: 271 http://deb.debian.org/debian trixie/main i386 libdrm2 i386 2.4.123-1 [41.8 kB] Get: 272 http://deb.debian.org/debian trixie/main i386 libdrm-amdgpu1 i386 2.4.123-1 [25.0 kB] Get: 273 http://deb.debian.org/debian trixie/main i386 libpciaccess0 i386 0.17-3+b3 [53.8 kB] Get: 274 http://deb.debian.org/debian trixie/main i386 libdrm-intel1 i386 2.4.123-1 [66.8 kB] Get: 275 http://deb.debian.org/debian trixie/main i386 libdrm-radeon1 i386 2.4.123-1 [23.0 kB] Get: 276 http://deb.debian.org/debian trixie/main i386 libglvnd0 i386 1.7.0-1+b2 [44.1 kB] Get: 277 http://deb.debian.org/debian trixie/main i386 libwayland-server0 i386 1.23.0-1+b1 [35.9 kB] Get: 278 http://deb.debian.org/debian trixie/main i386 libxcb-randr0 i386 1.17.0-2+b1 [118 kB] Get: 279 http://deb.debian.org/debian trixie/main i386 libglapi-mesa i386 24.2.8-1 [37.8 kB] Get: 280 http://deb.debian.org/debian trixie/main i386 libsensors-config all 1:3.6.0-10 [14.6 kB] Get: 281 http://deb.debian.org/debian trixie/main i386 libsensors5 i386 1:3.6.0-10+b1 [35.8 kB] Get: 282 http://deb.debian.org/debian trixie/main i386 libx11-xcb1 i386 2:1.8.10-2 [241 kB] Get: 283 http://deb.debian.org/debian trixie/main i386 libxcb-dri2-0 i386 1.17.0-2+b1 [107 kB] Get: 284 http://deb.debian.org/debian trixie/main i386 libxcb-dri3-0 i386 1.17.0-2+b1 [107 kB] Get: 285 http://deb.debian.org/debian trixie/main i386 libxcb-present0 i386 1.17.0-2+b1 [106 kB] Get: 286 http://deb.debian.org/debian trixie/main i386 libxcb-sync1 i386 1.17.0-2+b1 [109 kB] Get: 287 http://deb.debian.org/debian trixie/main i386 libxcb-xfixes0 i386 1.17.0-2+b1 [110 kB] Get: 288 http://deb.debian.org/debian trixie/main i386 libxshmfence1 i386 1.3-1+b3 [9000 B] Get: 289 http://deb.debian.org/debian trixie/main i386 mesa-libgallium i386 24.2.8-1 [9409 kB] Get: 290 http://deb.debian.org/debian trixie/main i386 libgbm1 i386 24.2.8-1 [43.9 kB] Get: 291 http://deb.debian.org/debian trixie/main i386 libwayland-client0 i386 1.23.0-1+b1 [27.2 kB] Get: 292 http://deb.debian.org/debian trixie/main i386 libegl-mesa0 i386 24.2.8-1 [140 kB] Get: 293 http://deb.debian.org/debian trixie/main i386 libegl1 i386 1.7.0-1+b2 [36.4 kB] Get: 294 http://deb.debian.org/debian trixie/main i386 libxcb-glx0 i386 1.17.0-2+b1 [124 kB] Get: 295 http://deb.debian.org/debian trixie/main i386 libxfixes3 i386 1:6.0.0-2+b3 [20.6 kB] Get: 296 http://deb.debian.org/debian trixie/main i386 libxxf86vm1 i386 1:1.1.4-1+b4 [20.1 kB] Get: 297 http://deb.debian.org/debian trixie/main i386 libvulkan1 i386 1.4.304.0-1 [139 kB] Get: 298 http://deb.debian.org/debian trixie/main i386 libgl1-mesa-dri i386 24.2.8-1 [42.5 kB] Get: 299 http://deb.debian.org/debian trixie/main i386 libglx-mesa0 i386 24.2.8-1 [160 kB] Get: 300 http://deb.debian.org/debian trixie/main i386 libglx0 i386 1.7.0-1+b2 [36.8 kB] Get: 301 http://deb.debian.org/debian trixie/main i386 libgl1 i386 1.7.0-1+b2 [82.7 kB] Get: 302 http://deb.debian.org/debian trixie/main i386 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 303 http://deb.debian.org/debian trixie/main i386 x11proto-dev all 2024.1-1 [603 kB] Get: 304 http://deb.debian.org/debian trixie/main i386 libxau-dev i386 1:1.0.11-1 [24.0 kB] Get: 305 http://deb.debian.org/debian trixie/main i386 libxdmcp-dev i386 1:1.1.5-1 [45.0 kB] Get: 306 http://deb.debian.org/debian trixie/main i386 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 307 http://deb.debian.org/debian trixie/main i386 libxcb1-dev i386 1.17.0-2+b1 [186 kB] Get: 308 http://deb.debian.org/debian trixie/main i386 libx11-dev i386 2:1.8.10-2 [917 kB] Get: 309 http://deb.debian.org/debian trixie/main i386 libglx-dev i386 1.7.0-1+b2 [15.8 kB] Get: 310 http://deb.debian.org/debian trixie/main i386 libgl-dev i386 1.7.0-1+b2 [101 kB] Get: 311 http://deb.debian.org/debian trixie/main i386 libegl-dev i386 1.7.0-1+b2 [19.5 kB] Get: 312 http://deb.debian.org/debian trixie/main i386 pkg-config i386 1.8.1-4 [14.0 kB] Get: 313 http://deb.debian.org/debian trixie/main i386 libeigen3-dev all 3.4.0-4 [1041 kB] Get: 314 http://deb.debian.org/debian trixie/main i386 libevdev2 i386 1.13.3+dfsg-1 [30.4 kB] Get: 315 http://deb.debian.org/debian trixie/main i386 libfile-which-perl all 1.27-2 [15.1 kB] Get: 316 http://deb.debian.org/debian trixie/main i386 libfile-homedir-perl all 1.006-2 [42.4 kB] Get: 317 http://deb.debian.org/debian trixie/main i386 libfontbox-java all 1:1.8.16-5 [211 kB] Get: 318 http://deb.debian.org/debian trixie/main i386 libglpk40 i386 5.0-1+b2 [422 kB] Get: 319 http://deb.debian.org/debian trixie/main i386 libklu2 i386 1:7.8.3+dfsg-2 [95.5 kB] Get: 320 http://deb.debian.org/debian trixie/main i386 libldl3 i386 1:7.8.3+dfsg-2 [25.1 kB] Get: 321 http://deb.debian.org/debian trixie/main i386 libsuitesparse-mongoose3 i386 1:7.8.3+dfsg-2 [55.0 kB] Get: 322 http://deb.debian.org/debian trixie/main i386 libumfpack6 i386 1:7.8.3+dfsg-2 [323 kB] Get: 323 http://deb.debian.org/debian trixie/main i386 librbio4 i386 1:7.8.3+dfsg-2 [45.4 kB] Get: 324 http://deb.debian.org/debian trixie/main i386 libspqr4 i386 1:7.8.3+dfsg-2 [167 kB] Get: 325 http://deb.debian.org/debian trixie/main i386 libspex3 i386 1:7.8.3+dfsg-2 [70.1 kB] Get: 326 http://deb.debian.org/debian trixie/main i386 libparu1 i386 1:7.8.3+dfsg-2 [82.2 kB] Get: 327 http://deb.debian.org/debian trixie/main i386 libsuitesparse-dev i386 1:7.8.3+dfsg-2 [1719 kB] Get: 328 http://deb.debian.org/debian trixie/main i386 libglpk-dev i386 5.0-1+b2 [511 kB] Get: 329 http://deb.debian.org/debian trixie/main i386 libopengl0 i386 1.7.0-1+b2 [29.3 kB] Get: 330 http://deb.debian.org/debian trixie/main i386 libglu1-mesa i386 9.0.2-1.1+b3 [190 kB] Get: 331 http://deb.debian.org/debian trixie/main i386 libopengl-dev i386 1.7.0-1+b2 [5384 B] Get: 332 http://deb.debian.org/debian trixie/main i386 libglu1-mesa-dev i386 9.0.2-1.1+b3 [234 kB] Get: 333 http://deb.debian.org/debian trixie/main i386 libgudev-1.0-0 i386 238-6 [14.9 kB] Get: 334 http://deb.debian.org/debian trixie/main i386 libhdf5-310 i386 1.14.5+repack-3 [1327 kB] Get: 335 http://deb.debian.org/debian trixie/main i386 libhdf5-cpp-310 i386 1.14.5+repack-3 [140 kB] Get: 336 http://deb.debian.org/debian trixie/main i386 libhdf5-fortran-310 i386 1.14.5+repack-3 [119 kB] Get: 337 http://deb.debian.org/debian trixie/main i386 libhdf5-hl-310 i386 1.14.5+repack-3 [81.6 kB] Get: 338 http://deb.debian.org/debian trixie/main i386 libhdf5-hl-fortran-310 i386 1.14.5+repack-3 [45.7 kB] Get: 339 http://deb.debian.org/debian trixie/main i386 libhdf5-hl-cpp-310 i386 1.14.5+repack-3 [24.9 kB] Get: 340 http://deb.debian.org/debian trixie/main i386 libjpeg62-turbo-dev i386 1:2.1.5-3+b1 [305 kB] Get: 341 http://deb.debian.org/debian trixie/main i386 libjpeg-dev i386 1:2.1.5-3+b1 [72.2 kB] Get: 342 http://deb.debian.org/debian trixie/main i386 libhdf5-dev i386 1.14.5+repack-3 [3319 kB] Get: 343 http://deb.debian.org/debian trixie/main i386 libwacom-common all 2.13.0-1 [98.0 kB] Get: 344 http://deb.debian.org/debian trixie/main i386 libwacom9 i386 2.13.0-1 [25.8 kB] Get: 345 http://deb.debian.org/debian trixie/main i386 libinput-bin i386 1.26.2-1 [25.6 kB] Get: 346 http://deb.debian.org/debian trixie/main i386 libmtdev1t64 i386 1.1.6-1.2+b1 [23.0 kB] Get: 347 http://deb.debian.org/debian trixie/main i386 libinput10 i386 1.26.2-1 [146 kB] Get: 348 http://deb.debian.org/debian trixie/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 349 http://deb.debian.org/debian trixie/main i386 libkpathsea6 i386 2024.20240313.70630+ds-5+b1 [160 kB] Get: 350 http://deb.debian.org/debian trixie/main i386 libmd4c0 i386 0.5.2-2+b1 [49.2 kB] Get: 351 http://deb.debian.org/debian trixie/main i386 libmime-charset-perl all 1.013.1-2 [34.0 kB] Get: 352 http://deb.debian.org/debian trixie/main i386 libmpfi0 i386 1.5.4+ds-4 [38.8 kB] Get: 353 http://deb.debian.org/debian trixie/main i386 libpaper-utils i386 2.2.5-0.3 [16.1 kB] Get: 354 http://deb.debian.org/debian trixie/main i386 libpcre2-16-0 i386 10.44-5 [258 kB] Get: 355 http://deb.debian.org/debian trixie/main i386 libpdfbox-java all 1:1.8.16-5 [5527 kB] Get: 356 http://deb.debian.org/debian trixie/main i386 libpotrace0 i386 1.16-2+b2 [24.5 kB] Get: 357 http://deb.debian.org/debian trixie/main i386 libptexenc1 i386 2024.20240313.70630+ds-5+b1 [50.3 kB] Get: 358 http://deb.debian.org/debian trixie/main i386 shared-mime-info i386 2.4-5+b1 [761 kB] Get: 359 http://deb.debian.org/debian trixie/main i386 libqt5core5t64 i386 5.15.15+dfsg-2 [2719 kB] Get: 360 http://deb.debian.org/debian trixie/main i386 libqt5concurrent5t64 i386 5.15.15+dfsg-2 [45.5 kB] Get: 361 http://deb.debian.org/debian trixie/main i386 libqt5dbus5t64 i386 5.15.15+dfsg-2 [238 kB] Get: 362 http://deb.debian.org/debian trixie/main i386 libqt5network5t64 i386 5.15.15+dfsg-2 [771 kB] Get: 363 http://deb.debian.org/debian trixie/main i386 libxcb-icccm4 i386 0.4.2-1 [28.2 kB] Get: 364 http://deb.debian.org/debian trixie/main i386 libxcb-util1 i386 0.4.0-1+b2 [22.8 kB] Get: 365 http://deb.debian.org/debian trixie/main i386 libxcb-image0 i386 0.4.0-2+b2 [22.7 kB] Get: 366 http://deb.debian.org/debian trixie/main i386 libxcb-keysyms1 i386 0.4.0-1+b3 [15.9 kB] Get: 367 http://deb.debian.org/debian trixie/main i386 libxcb-render-util0 i386 0.3.9-1+b2 [17.8 kB] Get: 368 http://deb.debian.org/debian trixie/main i386 libxcb-shape0 i386 1.17.0-2+b1 [106 kB] Get: 369 http://deb.debian.org/debian trixie/main i386 libxcb-xinerama0 i386 1.17.0-2+b1 [105 kB] Get: 370 http://deb.debian.org/debian trixie/main i386 libxcb-xinput0 i386 1.17.0-2+b1 [133 kB] Get: 371 http://deb.debian.org/debian trixie/main i386 libxcb-xkb1 i386 1.17.0-2+b1 [131 kB] Get: 372 http://deb.debian.org/debian trixie/main i386 xkb-data all 2.42-1 [790 kB] Get: 373 http://deb.debian.org/debian trixie/main i386 libxkbcommon0 i386 1.7.0-2 [118 kB] Get: 374 http://deb.debian.org/debian trixie/main i386 libxkbcommon-x11-0 i386 1.7.0-2 [17.0 kB] Get: 375 http://deb.debian.org/debian trixie/main i386 libqt5gui5t64 i386 5.15.15+dfsg-2 [6050 kB] Get: 376 http://deb.debian.org/debian trixie/main i386 libqt5widgets5t64 i386 5.15.15+dfsg-2 [2677 kB] Get: 377 http://deb.debian.org/debian trixie/main i386 libqt5opengl5t64 i386 5.15.15+dfsg-2 [164 kB] Get: 378 http://deb.debian.org/debian trixie/main i386 libqt5printsupport5t64 i386 5.15.15+dfsg-2 [223 kB] Get: 379 http://deb.debian.org/debian trixie/main i386 libqt5sql5t64 i386 5.15.15+dfsg-2 [135 kB] Get: 380 http://deb.debian.org/debian trixie/main i386 libqt5test5t64 i386 5.15.15+dfsg-2 [157 kB] Get: 381 http://deb.debian.org/debian trixie/main i386 libqt5xml5t64 i386 5.15.15+dfsg-2 [136 kB] Get: 382 http://deb.debian.org/debian trixie/main i386 libvulkan-dev i386 1.4.304.0-1 [1452 kB] Get: 383 http://deb.debian.org/debian trixie/main i386 libxext-dev i386 2:1.3.4-1+b3 [108 kB] Get: 384 http://deb.debian.org/debian trixie/main i386 qt5-qmake-bin i386 5.15.15+dfsg-2 [1142 kB] Get: 385 http://deb.debian.org/debian trixie/main i386 qtchooser i386 66-2 [27.8 kB] Get: 386 http://deb.debian.org/debian trixie/main i386 qt5-qmake i386 5.15.15+dfsg-2 [224 kB] Get: 387 http://deb.debian.org/debian trixie/main i386 qtbase5-dev-tools i386 5.15.15+dfsg-2 [858 kB] Get: 388 http://deb.debian.org/debian trixie/main i386 qtbase5-dev i386 5.15.15+dfsg-2 [1125 kB] Get: 389 http://deb.debian.org/debian trixie/main i386 libqt5opengl5-dev i386 5.15.15+dfsg-2 [51.4 kB] Get: 390 http://deb.debian.org/debian trixie/main i386 libqt5svg5 i386 5.15.15-2 [152 kB] Get: 391 http://deb.debian.org/debian trixie/main i386 libqt5svg5-dev i386 5.15.15-2 [13.0 kB] Get: 392 http://deb.debian.org/debian trixie/main i386 libsombok3 i386 2.4.0-2+b2 [33.6 kB] Get: 393 http://deb.debian.org/debian trixie/main i386 libsqlite3-dev i386 3.46.1-1 [1193 kB] Get: 394 http://deb.debian.org/debian trixie/main i386 libsvm3 i386 3.24+ds-6+b1 [42.7 kB] Get: 395 http://deb.debian.org/debian trixie/main i386 libsvm-dev i386 3.24+ds-6+b1 [63.2 kB] Get: 396 http://deb.debian.org/debian trixie/main i386 libsynctex2 i386 2024.20240313.70630+ds-5+b1 [65.9 kB] Get: 397 http://deb.debian.org/debian trixie/main i386 libteckit0 i386 2.5.12+ds1-1+b1 [285 kB] Get: 398 http://deb.debian.org/debian trixie/main i386 libtexlua53-5 i386 2024.20240313.70630+ds-5+b1 [129 kB] Get: 399 http://deb.debian.org/debian trixie/main i386 libunicode-linebreak-perl i386 0.0.20190101-1+b8 [97.5 kB] Get: 400 http://deb.debian.org/debian trixie/main i386 libwildmagic-common all 5.17+cleaned1-7 [7020 kB] Get: 401 http://deb.debian.org/debian trixie/main i386 libwildmagic5 i386 5.17+cleaned1-7+b2 [1603 kB] Get: 402 http://deb.debian.org/debian trixie/main i386 libwildmagic-dev i386 5.17+cleaned1-7+b2 [317 kB] Get: 403 http://deb.debian.org/debian trixie/main i386 libxerces-c3.2t64 i386 3.2.4+debian-1.3+b1 [964 kB] Get: 404 http://deb.debian.org/debian trixie/main i386 libxerces-c-dev i386 3.2.4+debian-1.3+b1 [1791 kB] Get: 405 http://deb.debian.org/debian trixie/main i386 libxi6 i386 2:1.8.2-1 [81.2 kB] Get: 406 http://deb.debian.org/debian trixie/main i386 libyaml-tiny-perl all 1.76-1 [29.8 kB] Get: 407 http://deb.debian.org/debian trixie/main i386 libzzip-0-13t64 i386 0.13.72+dfsg.1-1.2+b1 [58.1 kB] Get: 408 http://deb.debian.org/debian trixie/main i386 tex-common all 6.18 [32.5 kB] Get: 409 http://deb.debian.org/debian trixie/main i386 lmodern all 2.005-1 [9480 kB] Get: 410 http://deb.debian.org/debian trixie/main i386 preview-latex-style all 13.2-1 [350 kB] Get: 411 http://deb.debian.org/debian trixie/main i386 t1utils i386 1.41-4 [62.3 kB] Get: 412 http://deb.debian.org/debian trixie/main i386 tex-gyre all 20180621-6 [6209 kB] Get: 413 http://deb.debian.org/debian trixie/main i386 texlive-binaries i386 2024.20240313.70630+ds-5+b1 [8373 kB] Get: 414 http://deb.debian.org/debian trixie/main i386 xdg-utils all 1.2.1-2 [75.8 kB] Get: 415 http://deb.debian.org/debian trixie/main i386 texlive-base all 2024.20241115-1 [22.7 MB] Get: 416 http://deb.debian.org/debian trixie/main i386 texlive-latex-base all 2024.20241115-1 [1278 kB] Get: 417 http://deb.debian.org/debian trixie/main i386 texlive-luatex all 2024.20241115-1 [27.8 MB] Get: 418 http://deb.debian.org/debian trixie/main i386 texlive-plain-generic all 2024.20241115-1 [28.6 MB] Get: 419 http://deb.debian.org/debian trixie/main i386 texlive-extra-utils all 2024.20241115-1 [64.6 MB] Get: 420 http://deb.debian.org/debian trixie/main i386 texlive-font-utils all 2024.20241115-1 [6980 kB] Get: 421 http://deb.debian.org/debian trixie/main i386 texlive-fonts-extra all 2024.20241115-1 [626 MB] Get: 422 http://deb.debian.org/debian trixie/main i386 texlive-fonts-recommended all 2024.20241115-1 [4991 kB] Get: 423 http://deb.debian.org/debian trixie/main i386 texlive-latex-recommended all 2024.20241115-1 [8757 kB] Get: 424 http://deb.debian.org/debian trixie/main i386 texlive-pictures all 2024.20241115-1 [17.0 MB] Get: 425 http://deb.debian.org/debian trixie/main i386 texlive-latex-extra all 2024.20241115-1 [24.6 MB] Fetched 1144 MB in 23s (50.2 MB/s) Preconfiguring packages ... Selecting previously unselected package libfftw3-double3:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19842 files and directories currently installed.) Preparing to unpack .../00-libfftw3-double3_3.3.10-2+b1_i386.deb ... Unpacking libfftw3-double3:i386 (3.3.10-2+b1) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../01-libexpat1_2.6.4-1_i386.deb ... Unpacking libexpat1:i386 (2.6.4-1) ... 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Unpacking libfontconfig1:i386 (2.15.0-2) ... Selecting previously unselected package libsharpyuv0:i386. Preparing to unpack .../14-libsharpyuv0_1.5.0-0.1_i386.deb ... Unpacking libsharpyuv0:i386 (1.5.0-0.1) ... Selecting previously unselected package libdav1d7:i386. Preparing to unpack .../15-libdav1d7_1.5.0-1+b1_i386.deb ... Unpacking libdav1d7:i386 (1.5.0-1+b1) ... Selecting previously unselected package libheif-plugin-dav1d:i386. Preparing to unpack .../16-libheif-plugin-dav1d_1.19.5-1_i386.deb ... Unpacking libheif-plugin-dav1d:i386 (1.19.5-1) ... Selecting previously unselected package libde265-0:i386. Preparing to unpack .../17-libde265-0_1.0.15-1+b2_i386.deb ... Unpacking libde265-0:i386 (1.0.15-1+b2) ... Selecting previously unselected package libheif-plugin-libde265:i386. Preparing to unpack .../18-libheif-plugin-libde265_1.19.5-1_i386.deb ... Unpacking libheif-plugin-libde265:i386 (1.19.5-1) ... Selecting previously unselected package libheif1:i386. 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Preparing to unpack .../48-python3.12-minimal_3.12.8-5_i386.deb ... Unpacking python3.12-minimal (3.12.8-5) ... Setting up libpython3.12-minimal:i386 (3.12.8-5) ... Setting up libexpat1:i386 (2.6.4-1) ... Setting up python3.12-minimal (3.12.8-5) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21977 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.8-1_i386.deb ... 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Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3 to /lib/i386-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3.0.0 to /lib/i386-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:i386 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:i386. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_i386.deb ... Unpacking libnsl2:i386 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-6_all.deb ... Unpacking readline-common (8.2-6) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../14-libreadline8t64_8.2-6_i386.deb ... 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Setting up libsuitesparseconfig7:i386 (1:7.8.3+dfsg-2) ... Setting up libopenjp2-7:i386 (2.5.0-2+b4) ... Setting up libx11-6:i386 (2:1.8.10-2) ... Setting up libthai-data (0.1.29-2) ... Setting up xorg-sgml-doctools (1:1.11-1.1) ... Setting up netbase (6.4) ... Setting up libabsl20230802:i386 (20230802.1-4) ... Setting up libngtcp2-16:i386 (1.9.1-1) ... Setting up libwildmagic-common (5.17+cleaned1-7) ... Setting up cmake-data (3.31.4-2) ... Setting up librhash1:i386 (1.4.5-1) ... Setting up libcdt5:i386 (2.42.4-2+b1) ... Setting up libkrb5-3:i386 (1.21.3-3) ... Setting up libcgraph6:i386 (2.42.4-2+b1) ... Setting up libboost-dev:i386 (1.83.0.2+b2) ... Setting up libglu1-mesa:i386 (9.0.2-1.1+b3) ... Setting up libpaper2:i386 (2.2.5-0.3) ... Setting up libssh2-1t64:i386 (1.11.1-1) ... Setting up libboost-math1.83.0:i386 (1.83.0-4) ... Setting up libopengl-dev:i386 (1.7.0-1+b2) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libde265-0:i386 (1.0.15-1+b2) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up libtasn1-6-dev:i386 (4.19.0-3+b3) ... Setting up libwebpmux3:i386 (1.5.0-0.1) ... Setting up libdrm-common (2.4.123-1) ... Setting up libyuv0:i386 (0.0.1899.20250103-1) ... Setting up libevdev2:i386 (1.13.3+dfsg-1) ... Setting up readline-common (8.2-6) ... Setting up libicu-dev:i386 (72.1-6) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up xdg-utils (1.2.1-2) ... update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode Setting up libldap2:i386 (2.6.9+dfsg-1) ... Setting up libbrotli-dev:i386 (1.1.0-2+b6) ... Setting up libfmt10:i386 (10.1.1+ds1-4) ... Setting up qtchooser (66-2) ... Setting up libblas-dev:i386 (3.12.0-4) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so to provide /usr/lib/i386-linux-gnu/libblas.so (libblas.so-i386-linux-gnu) in auto mode Setting up libsz2:i386 (1.1.3-1+b1) ... Setting up libsvm3:i386 (3.24+ds-6+b1) ... Setting up libsynctex2:i386 (2024.20240313.70630+ds-5+b1) ... Setting up libwacom-common (2.13.0-1) ... Setting up libbz2-dev:i386 (1.0.8-6) ... Setting up libxkbcommon0:i386 (1.7.0-2) ... Setting up libpotrace0:i386 (1.16-2+b2) ... Setting up libwayland-client0:i386 (1.23.0-1+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up x11proto-dev (2024.1-1) ... Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libxcb-dri3-0:i386 (1.17.0-2+b1) ... Setting up libllvm19:i386 (1:19.1.6-1+b1) ... Setting up libwayland-server0:i386 (1.23.0-1+b1) ... Setting up libx11-xcb1:i386 (2:1.8.10-2) ... Setting up libice6:i386 (2:1.1.1-1) ... Setting up liblapack3:i386 (3.12.0-4) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up gettext (0.22.5-4) ... Setting up libgmp-dev:i386 (2:6.3.0+dfsg-3) ... Setting up libamd3:i386 (1:7.8.3+dfsg-2) ... Setting up libclang1-19 (1:19.1.6-1+b1) ... Setting up libpdfbox-java (1:1.8.16-5) ... Setting up libxau-dev:i386 (1:1.0.11-1) ... Setting up libxpm4:i386 (1:3.5.17-1+b3) ... Setting up qt5-qmake:i386 (5.15.15+dfsg-2) ... Setting up nettle-dev:i386 (3.10-1+b1) ... Setting up libxrender1:i386 (1:0.9.10-1.1+b3) ... Setting up libboost-math1.83-dev:i386 (1.83.0-4) ... Setting up libtool (2.5.4-2) ... Setting up libcolamd3:i386 (1:7.8.3+dfsg-2) ... Setting up libspex3:i386 (1:7.8.3+dfsg-2) ... Setting up libsuitesparse-mongoose3:i386 (1:7.8.3+dfsg-2) ... Setting up fontconfig-config (2.15.0-2) ... Setting up libboost-math-dev:i386 (1.83.0.2+b2) ... Setting up libwebpdemux2:i386 (1.5.0-0.1) ... Setting up libcommons-parent-java (56-1) ... Setting up libaec-dev:i386 (1.1.3-1+b1) ... Setting up libavahi-common3:i386 (0.8-16) ... Setting up libcxsparse4:i386 (1:7.8.3+dfsg-2) ... Setting up libboost-serialization1.83-dev:i386 (1.83.0-4) ... Setting up libjpeg-dev:i386 (1:2.1.5-3+b1) ... Setting up libcommons-logging-java (1.3.0-1) ... Setting up libxext6:i386 (2:1.3.4-1+b3) ... Setting up libidn2-0:i386 (2.3.7-2+b1) ... Setting up libpaper-utils (2.2.5-0.3) ... Setting up libcamd3:i386 (1:7.8.3+dfsg-2) ... Setting up pkgconf:i386 (1.8.1-4) ... Setting up libxxf86vm1:i386 (1:1.1.4-1+b4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up coinor-libcoinutils3v5:i386 (2.11.11+ds-2) ... Setting up libthai0:i386 (0.1.29-2+b1) ... Setting up libxdmcp-dev:i386 (1:1.1.5-1) ... Setting up libglib2.0-0t64:i386 (2.82.4-2) ... No schema files found: doing nothing. Setting up libptexenc1:i386 (2024.20240313.70630+ds-5+b1) ... Setting up libfreetype6:i386 (2.13.3+dfsg-1) ... Setting up libglpk40:i386 (5.0-1+b2) ... Setting up libxfixes3:i386 (1:6.0.0-2+b3) ... Setting up librbio4:i386 (1:7.8.3+dfsg-2) ... Setting up libboost-date-time1.83-dev:i386 (1.83.0-4) ... Setting up libldap-dev:i386 (2.6.9+dfsg-1) ... Setting up shared-mime-info (2.4-5+b1) ... Setting up libp11-kit0:i386 (0.25.5-3) ... Setting up libxkbcommon-x11-0:i386 (1.7.0-2) ... Setting up libsvm-dev:i386 (3.24+ds-6+b1) ... Setting up liblapack-dev:i386 (3.12.0-4) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so to provide /usr/lib/i386-linux-gnu/liblapack.so (liblapack.so-i386-linux-gnu) in auto mode Setting up libeigen3-dev (3.4.0-4) ... Setting up libgssapi-krb5-2:i386 (1.21.3-3) ... Setting up libboost-regex1.83-dev:i386 (1.83.0-4) ... Setting up pkg-config:i386 (1.8.1-4) ... Setting up libgav1-1:i386 (0.19.0-3) ... Setting up ucf (3.0048) ... Setting up libboost-date-time-dev:i386 (1.83.0.2+b2) ... Setting up coinor-libcoinutils-dev:i386 (2.11.11+ds-2) ... Setting up libssh2-1-dev:i386 (1.11.1-1) ... Setting up libidn2-dev:i386 (2.3.7-2+b1) ... Setting up coinor-libosi1v5:i386 (0.108.10+ds-1+b1) ... Setting up libccolamd3:i386 (1:7.8.3+dfsg-2) ... Setting up libreadline8t64:i386 (8.2-6) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libgvpr2:i386 (2.42.4-2+b1) ... Setting up libdrm2:i386 (2.4.123-1) ... Setting up liblqr-1-0:i386 (0.4.2-2.1+b2) ... Setting up groff-base (1.23.0-7) ... Setting up libharfbuzz0b:i386 (10.2.0-1) ... Setting up libgts-0.7-5t64:i386 (0.7.6+darcs121130-5.2+b1) ... Setting up libfontconfig1:i386 (2.15.0-2) ... Setting up libsm6:i386 (2:1.2.4-1) ... Setting up libarchive13t64:i386 (3.7.4-1.1) ... Setting up libavahi-client3:i386 (0.8-16) ... Setting up libgudev-1.0-0:i386 (238-6) ... Setting up libp11-kit-dev:i386 (0.25.5-3) ... Setting up libclang-cpp19 (1:19.1.6-1+b1) ... Setting up libdrm-amdgpu1:i386 (2.4.123-1) ... Setting up libgnutls30t64:i386 (3.8.8-2) ... Setting up libgnutls-openssl27t64:i386 (3.8.8-2) ... Setting up libnghttp2-dev:i386 (1.64.0-1) ... Setting up fontconfig (2.15.0-2) ... Regenerating fonts cache... done. Setting up libavif16:i386 (1.1.1-1) ... Setting up libcholmod5:i386 (1:7.8.3+dfsg-2) ... Setting up libxcb1-dev:i386 (1.17.0-2+b1) ... Setting up libxi6:i386 (2:1.8.2-1) ... Setting up libtirpc3t64:i386 (1.3.4+ds-1.3+b1) ... Setting up libspqr4:i386 (1:7.8.3+dfsg-2) ... Setting up libsombok3:i386 (2.4.0-2+b2) ... Setting up libwacom9:i386 (2.13.0-1) ... Setting up libdrm-radeon1:i386 (2.4.123-1) ... Setting up libboost-iostreams1.83-dev:i386 (1.83.0-4) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up coinor-libosi-dev:i386 (0.108.10+ds-1+b1) ... Setting up libpango-1.0-0:i386 (1.56.1-1) ... Setting up libdrm-intel1:i386 (2.4.123-1) ... Setting up libpsl5t64:i386 (0.21.2-1.1+b1) ... Setting up libx11-dev:i386 (2:1.8.10-2) ... Setting up libboost-iostreams-dev:i386 (1.83.0.2+b2) ... Setting up xfonts-utils (1:7.7+7) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:i386 (1.18.2-2) ... Setting up libpsl-dev:i386 (0.21.2-1.1+b1) ... Setting up libinput-bin (1.26.2-1) ... Setting up tex-common (6.18) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libqt5core5t64:i386 (5.15.15+dfsg-2) ... Setting up doxygen (1.9.8+ds-2+b3) ... Setting up libgnutls-dane0t64:i386 (3.8.8-2) ... Setting up librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libklu2:i386 (1:7.8.3+dfsg-2) ... Setting up libgssrpc4t64:i386 (1.21.3-3) ... Setting up coinor-libclp1:i386 (1.17.10+ds-1) ... Setting up libunicode-linebreak-perl (0.0.20190101-1+b8) ... Setting up libraqm0:i386 (0.10.2-1) ... Setting up libxt6t64:i386 (1:1.2.1-1.2+b2) ... Setting up coinor-libclp-dev:i386 (1.17.10+ds-1) ... Setting up libxext-dev:i386 (2:1.3.4-1+b3) ... Setting up libumfpack6:i386 (1:7.8.3+dfsg-2) ... Setting up lmodern (2.005-1) ... Setting up libnsl2:i386 (1.3.0-3+b3) ... Setting up libqt5sql5t64:i386 (5.15.15+dfsg-2) ... Setting up coinor-libcgl1:i386 (0.60.9+ds-1) ... Setting up libpangoft2-1.0-0:i386 (1.56.1-1) ... Setting up libcups2t64:i386 (2.4.10-2+b1) ... Setting up tex-gyre (20180621-6) ... Setting up libngtcp2-crypto-gnutls8:i386 (1.9.1-1) ... Setting up libpangocairo-1.0-0:i386 (1.56.1-1) ... Setting up libkadm5clnt-mit12:i386 (1.21.3-3) ... Setting up coinor-libcgl-dev:i386 (0.60.9+ds-1) ... Setting up libgnutls28-dev:i386 (3.8.8-2) ... Setting up libinput10:i386 (1.26.2-1) ... Setting up mesa-libgallium:i386 (24.2.8-1) ... Setting up libxmu6:i386 (2:1.1.3-3+b4) ... Setting up libqt5dbus5t64:i386 (5.15.15+dfsg-2) ... Setting up libpython3.12-stdlib:i386 (3.12.8-5) ... Setting up libcurl4t64:i386 (8.11.1-1+b1) ... Setting up libkdb5-10t64:i386 (1.21.3-3) ... Setting up libgbm1:i386 (24.2.8-1) ... Setting up libqt5concurrent5t64:i386 (5.15.15+dfsg-2) ... Setting up preview-latex-style (13.2-1) ... Setting up python3.12 (3.12.8-5) ... Setting up libgl1-mesa-dri:i386 (24.2.8-1) ... Setting up libqt5network5t64:i386 (5.15.15+dfsg-2) ... Setting up libcurl3t64-gnutls:i386 (8.11.1-1+b1) ... Setting up libqt5xml5t64:i386 (5.15.15+dfsg-2) ... Setting up debhelper (13.23) ... Setting up dh-exec (0.30) ... Setting up libxaw7:i386 (2:1.0.16-1) ... Setting up fonts-urw-base35 (20200910-8) ... Setting up libqt5test5t64:i386 (5.15.15+dfsg-2) ... Setting up libxerces-c3.2t64:i386 (3.2.4+debian-1.3+b1) ... Setting up libparu1:i386 (1:7.8.3+dfsg-2) ... Setting up qtbase5-dev-tools (5.15.15+dfsg-2) ... Setting up libegl-mesa0:i386 (24.2.8-1) ... Setting up libxerces-c-dev:i386 (3.2.4+debian-1.3+b1) ... Setting up librtmp-dev:i386 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up coinor-libcbc3.1:i386 (2.10.12+ds-1) ... Setting up libhdf5-310:i386 (1.14.5+repack-3) ... Setting up texlive-binaries (2024.20240313.70630+ds-5+b1) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up libkadm5srv-mit12:i386 (1.21.3-3) ... Setting up libegl1:i386 (1.7.0-1+b2) ... Setting up cmake (3.31.4-2) ... Setting up coinor-libcbc-dev:i386 (2.10.12+ds-1) ... Setting up libhdf5-fortran-310:i386 (1.14.5+repack-3) ... Setting up texlive-base (2024.20241115-1) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex Setting up libpython3-stdlib:i386 (3.12.8-1) ... Setting up krb5-multidev:i386 (1.21.3-3) ... Setting up libhdf5-cpp-310:i386 (1.14.5+repack-3) ... Setting up libgs10-common (10.04.0~dfsg-2) ... Setting up libhdf5-hl-310:i386 (1.14.5+repack-3) ... Setting up libglx-mesa0:i386 (24.2.8-1) ... Setting up libglx0:i386 (1.7.0-1+b2) ... Setting up libsuitesparse-dev:i386 (1:7.8.3+dfsg-2) ... Setting up texlive-luatex (2024.20241115-1) ... Setting up texlive-plain-generic (2024.20241115-1) ... Setting up python3 (3.12.8-1) ... Setting up texlive-font-utils (2024.20241115-1) ... Setting up libkrb5-dev:i386 (1.21.3-3) ... Setting up python3-pygments (2.18.0+dfsg-2) ... Setting up libgl1:i386 (1.7.0-1+b2) ... Setting up texlive-latex-base (2024.20241115-1) ... Setting up libcurl4-openssl-dev:i386 (8.11.1-1+b1) ... Setting up texlive-extra-utils (2024.20241115-1) ... Setting up libglpk-dev:i386 (5.0-1+b2) ... Setting up texlive-fonts-extra (2024.20241115-1) ... Setting up texlive-latex-recommended (2024.20241115-1) ... Setting up texlive-pictures (2024.20241115-1) ... Setting up cppcheck (2.16.0-1) ... Setting up texlive-fonts-recommended (2024.20241115-1) ... Setting up libglx-dev:i386 (1.7.0-1+b2) ... Setting up libgl-dev:i386 (1.7.0-1+b2) ... Setting up libgs10:i386 (10.04.0~dfsg-2+b1) ... Setting up libhdf5-hl-cpp-310:i386 (1.14.5+repack-3) ... Setting up libhdf5-hl-fortran-310:i386 (1.14.5+repack-3) ... Setting up libvulkan-dev:i386 (1.4.304.0-1) ... Setting up libegl-dev:i386 (1.7.0-1+b2) ... Setting up libwildmagic5:i386 (5.17+cleaned1-7+b2) ... Setting up texlive-latex-extra (2024.20241115-1) ... Setting up ghostscript (10.04.0~dfsg-2+b1) ... Setting up libqt5gui5t64:i386 (5.15.15+dfsg-2) ... Setting up libhdf5-dev (1.14.5+repack-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/i386-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libglu1-mesa-dev:i386 (9.0.2-1.1+b3) ... Setting up libwildmagic-dev:i386 (5.17+cleaned1-7+b2) ... Setting up libqt5widgets5t64:i386 (5.15.15+dfsg-2) ... Setting up libqt5svg5:i386 (5.15.15-2) ... Setting up libqt5svg5-dev:i386 (5.15.15-2) ... Setting up libqt5opengl5t64:i386 (5.15.15+dfsg-2) ... Setting up libqt5printsupport5t64:i386 (5.15.15+dfsg-2) ... Setting up qtbase5-dev:i386 (5.15.15+dfsg-2) ... Setting up libqt5opengl5-dev:i386 (5.15.15+dfsg-2) ... Setting up libheif-plugin-dav1d:i386 (1.19.5-1) ... Setting up libheif-plugin-libde265:i386 (1.19.5-1) ... Setting up libheif1:i386 (1.19.5-1) ... Setting up libgd3:i386 (2.3.3-12+b1) ... Setting up libgvc6 (2.42.4-2+b1) ... Setting up libmagickcore-7.q16-10:i386 (8:7.1.1.43+dfsg1-1) ... Setting up graphviz (2.42.4-2+b1) ... Setting up libmagickwand-7.q16-10:i386 (8:7.1.1.43+dfsg1-1) ... Setting up imagemagick-7.q16 (8:7.1.1.43+dfsg1-1) ... update-alternatives: using /usr/bin/compare-im7.q16 to provide /usr/bin/compare (compare) in auto mode update-alternatives: using /usr/bin/compare-im7.q16 to provide /usr/bin/compare-im7 (compare-im7) in auto mode update-alternatives: using /usr/bin/animate-im7.q16 to provide /usr/bin/animate (animate) in auto mode update-alternatives: using /usr/bin/animate-im7.q16 to provide /usr/bin/animate-im7 (animate-im7) in auto mode update-alternatives: using /usr/bin/convert-im7.q16 to provide /usr/bin/convert (convert) in auto mode update-alternatives: using /usr/bin/convert-im7.q16 to provide /usr/bin/convert-im7 (convert-im7) in auto mode update-alternatives: using /usr/bin/composite-im7.q16 to provide /usr/bin/composite (composite) in auto mode update-alternatives: using /usr/bin/composite-im7.q16 to provide /usr/bin/composite-im7 (composite-im7) in auto mode update-alternatives: using /usr/bin/conjure-im7.q16 to provide /usr/bin/conjure (conjure) in auto mode update-alternatives: using /usr/bin/conjure-im7.q16 to provide /usr/bin/conjure-im7 (conjure-im7) in auto mode update-alternatives: using /usr/bin/import-im7.q16 to provide /usr/bin/import (import) in auto mode update-alternatives: using /usr/bin/import-im7.q16 to provide /usr/bin/import-im7 (import-im7) in auto mode update-alternatives: using /usr/bin/identify-im7.q16 to provide /usr/bin/identify (identify) in auto mode update-alternatives: using /usr/bin/identify-im7.q16 to provide /usr/bin/identify-im7 (identify-im7) in auto mode update-alternatives: using /usr/bin/stream-im7.q16 to provide /usr/bin/stream (stream) in auto mode update-alternatives: using /usr/bin/stream-im7.q16 to provide /usr/bin/stream-im7 (stream-im7) in auto mode update-alternatives: using /usr/bin/display-im7.q16 to provide /usr/bin/display (display) in auto mode update-alternatives: using /usr/bin/display-im7.q16 to provide /usr/bin/display-im7 (display-im7) in auto mode update-alternatives: using /usr/bin/montage-im7.q16 to provide /usr/bin/montage (montage) in auto mode update-alternatives: using /usr/bin/montage-im7.q16 to provide /usr/bin/montage-im7 (montage-im7) in auto mode update-alternatives: using /usr/bin/mogrify-im7.q16 to provide /usr/bin/mogrify (mogrify) in auto mode update-alternatives: using /usr/bin/mogrify-im7.q16 to provide /usr/bin/mogrify-im7 (mogrify-im7) in auto mode update-alternatives: using /usr/bin/magick-im7.q16 to provide /usr/bin/magick (magick) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/magick.1.gz because associated file /usr/share/man/man1/magick-im7.q16.1.gz (of link group magick) doesn't exist update-alternatives: using /usr/bin/magick-im7.q16 to provide /usr/bin/magick-im7 (magick-im7) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/magick-im7.1.gz because associated file /usr/share/man/man1/magick-im7.q16.1.gz (of link group magick-im7) doesn't exist update-alternatives: using /usr/bin/magick-script-im7.q16 to provide /usr/bin/magick-script (magick-script) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/magick-script.1.gz because associated file /usr/share/man/man1/magick-script-im7.q16.1.gz (of link group magick-script) doesn't exist update-alternatives: using /usr/bin/magick-script-im7.q16 to provide /usr/bin/magick-script-im7 (magick-script-im7) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/magick-script-im7.1.gz because associated file /usr/share/man/man1/magick-script-im7.q16.1.gz (of link group magick-script-im7) doesn't exist Setting up imagemagick (8:7.1.1.43+dfsg1-1) ... Processing triggers for libc-bin (2.40-5) ... Processing triggers for tex-common (6.18) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.36.2-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/openms-2.6.0+cleaned1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../openms_2.6.0+cleaned1-4_source.changes dpkg-buildpackage: info: source package openms dpkg-buildpackage: info: source version 2.6.0+cleaned1-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Anton Gladky dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --buildsystem=cmake --no-parallel dh_testdir -O--buildsystem=cmake -O--no-parallel dh_auto_clean -O--buildsystem=cmake -O--no-parallel dh_autoreconf_clean -O--buildsystem=cmake -O--no-parallel debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1' entering the override_dh_clean target # Remove the generated xpm icon files: rm -f debian/TOPPAS.xpm rm -f debian/TOPPView.xpm # Remove the generated topp.1 man page: rm -f debian/topp.1 dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/libopenms2.6.0.substvars debian/libopenms-dev.substvars debian/topp.substvars debian/openms-common.substvars debian/openms-doc.substvars debian/openms.substvars debian/files rm -fr -- debian/libopenms2.6.0/ debian/tmp/ debian/libopenms-dev/ debian/topp/ debian/openms-common/ debian/openms-doc/ debian/openms/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) make[1]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1' debian/rules build dh build --buildsystem=cmake --no-parallel dh_testdir -O--buildsystem=cmake -O--no-parallel dh_update_autotools_config -O--buildsystem=cmake -O--no-parallel dh_autoreconf -O--buildsystem=cmake -O--no-parallel debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1' dh_auto_configure -- \ -DDEBIAN_BUILD=ON \ -DHAS_XSERVER=OFF \ -DCMAKE_FIND_LIBRARY_SUFFIXES=".so" \ -DCMAKE_SKIP_RPATH=ON \ -DCMAKE_INSTALL_PREFIX="/usr" \ -DOPENMS_CONTRIB_LIBS="/usr/lib;/usr/lib/i386-linux-gnu" \ -DCMAKE_BUILD_TYPE=release \ -DBOOST_USE_STATIC=OFF \ -DENABLE_STYLE_TESTING=OFF \ -DENABLE_TOPP_TESTING=OFF \ -DENABLE_CLASS_TESTING=OFF \ -DENABLE_PIPELINE_TESTING=OFF \ -DENABLE_TUTORIALS=ON \ -DSEQAN_INCLUDE_DIR=/build/reproducible-path/openms-2.6.0+cleaned1/debian cd obj-i686-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu -DDEBIAN_BUILD=ON -DHAS_XSERVER=OFF -DCMAKE_FIND_LIBRARY_SUFFIXES=.so -DCMAKE_SKIP_RPATH=ON -DCMAKE_INSTALL_PREFIX=/usr -DOPENMS_CONTRIB_LIBS=/usr/lib\;/usr/lib/i386-linux-gnu -DCMAKE_BUILD_TYPE=release -DBOOST_USE_STATIC=OFF -DENABLE_STYLE_TESTING=OFF -DENABLE_TOPP_TESTING=OFF -DENABLE_CLASS_TESTING=OFF -DENABLE_PIPELINE_TESTING=OFF -DENABLE_TUTORIALS=ON -DSEQAN_INCLUDE_DIR=/build/reproducible-path/openms-2.6.0\+cleaned1/debian .. CMake Deprecation Warning at CMakeLists.txt:35 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Warning (dev) at CMakeLists.txt:73 (include): Policy CMP0145 is not set: The Dart and FindDart modules are removed. Run "cmake --help-policy CMP0145" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at /usr/share/cmake-3.31/Modules/Dart.cmake:47 (message): Policy CMP0145 is not set: The Dart and FindDart modules are removed. Run "cmake --help-policy CMP0145" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:73 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Building OpenMS 2.6.0 -- [CMake cannot track Git commits and branching, since Git or the .git folder was not found. ('-D GIT_TRACKING=On')] -- OpenMP support requested: ON -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Architecture: 32 bit -- Performing Test WITH_FPIC -- Performing Test WITH_FPIC - Success -- Compiler checks for conversion: OFF -- Collection of usage statistics and update notifications enabled. -- If you don't want this information to be transmitted to our update sever, you can: -- - Switch the build variable ENABLE_UPDATE_CHECK to OFF to remove the functionality at build time. -- - Set the environment variable OPENMS_DISABLE_UPDATE_CHECK to disable the functionality at runtime. CMake Deprecation Warning at src/CMakeLists.txt:35 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. CMake Deprecation Warning at src/openswathalgo/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. CMake Warning (dev) at cmake/build_system_macros.cmake:90 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): src/openswathalgo/CMakeLists.txt:41 (find_boost) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost: /usr/include (found suitable version "1.83.0", minimum required is "1.48.0") CMake Deprecation Warning at src/openswathalgo/thirdparty/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. CMake Deprecation Warning at src/openswathalgo/thirdparty/MIToolbox/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- Adding library OpenSwathAlgo -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success CMake Warning (dev) at cmake/install_macros.cmake:72 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake/add_library_macros.cmake:200 (install_headers) src/openswathalgo/CMakeLists.txt:58 (openms_add_library) This warning is for project developers. Use -Wno-dev to suppress it. -- Adding library OpenSwathAlgo - SUCCESS CMake Deprecation Warning at src/openms/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. CMake Deprecation Warning at src/openms/thirdparty/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. CMake Deprecation Warning at src/openms/thirdparty/eol-bspline/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. CMake Deprecation Warning at src/openms/thirdparty/evergreen/src/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. CMake Deprecation Warning at src/openms/thirdparty/IsoSpec/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. CMake Deprecation Warning at src/openms/thirdparty/json/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- Found XercesC: /usr/lib/i386-linux-gnu/libxerces-c.so (found version "3.2.4") CMake Warning (dev) at cmake/build_system_macros.cmake:90 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): src/openms/cmake_findExternalLibs.cmake:60 (find_boost) src/openms/CMakeLists.txt:70 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost: /usr/include (found suitable version "1.83.0", minimum required is "1.48.0") found components: iostreams date_time math_c99 regex -- Found Boost version 1.83.0 -- Found SEQAN: /build/reproducible-path/openms-2.6.0+cleaned1/debian (found suitable version "1.4.2", minimum required is "1.4.0") -- Found LIBSVM: /usr/lib/i386-linux-gnu/libsvm.so (found suitable version "3.2.4", minimum required is "2.91") -- Found COIN: /usr/include -- Found GLPK: /usr/lib/i386-linux-gnu/libglpk.so -- Found ZLIB: /usr/lib/i386-linux-gnu/libz.so (found version "1.3.1") -- Found BZip2: /usr/lib/i386-linux-gnu/libbz2.so (found version "1.0.8") -- Looking for BZ2_bzCompressInit in /usr/lib/i386-linux-gnu/libbz2.so -- Looking for BZ2_bzCompressInit in /usr/lib/i386-linux-gnu/libbz2.so - found -- Found Eigen3: /usr/include/eigen3 (Required is at least version "3.3.4") -- Found WM5: /usr/include/libwildmagic CMake Warning (dev) at /usr/share/cmake-3.31/Modules/FindPackageHandleStandardArgs.cmake:441 (message): The package name passed to `find_package_handle_standard_args` (SQLite) does not match the name of the calling package (SQLITE). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/modules/FindSQLITE.cmake:201 (find_package_handle_standard_args) src/openms/cmake_findExternalLibs.cmake:134 (find_package) src/openms/CMakeLists.txt:70 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Found SQLite: /usr/include (found version "3.46.1") -- Found HDF5: /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/i386-linux-gnu/libcrypto.so;/usr/lib/i386-linux-gnu/libcurl.so;/usr/lib/i386-linux-gnu/libpthread.a;/usr/lib/i386-linux-gnu/libsz.so;/usr/lib/i386-linux-gnu/libz.so;/usr/lib/i386-linux-gnu/libdl.a;/usr/lib/i386-linux-gnu/libm.so;/usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so;/usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/i386-linux-gnu/libcrypto.so;/usr/lib/i386-linux-gnu/libcurl.so;/usr/lib/i386-linux-gnu/libpthread.a;/usr/lib/i386-linux-gnu/libsz.so;/usr/lib/i386-linux-gnu/libz.so;/usr/lib/i386-linux-gnu/libdl.a;/usr/lib/i386-linux-gnu/libm.so (found version "1.14.5") found components: C CXX HL -- Found Qt 5.15.15 -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Info: CF_OPENMS_DATA_PATH: -- Info: CF_OPENMS_DOC_PATH: -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned char -- Check size of unsigned char - done -- Check size of unsigned short -- Check size of unsigned short - done -- Check size of unsigned int -- Check size of unsigned int - done -- Check size of unsigned long -- Check size of unsigned long - done -- Check size of unsigned long long -- Check size of unsigned long long - done -- Check size of short -- Check size of short - done -- Check size of int -- Check size of int - done -- Check size of long -- Check size of long - done -- Check size of long long -- Check size of long long - done -- Check size of int32_t -- Check size of int32_t - done -- Check size of int64_t -- Check size of int64_t - done -- Check size of uint8_t -- Check size of uint8_t - done -- Check size of uint32_t -- Check size of uint32_t - done -- Check size of uint64_t -- Check size of uint64_t - done -- Looking for C++ include unistd.h -- Looking for C++ include unistd.h - found -- Looking for C++ include process.h -- Looking for C++ include process.h - not found -- Looking for C++ include time.h -- Looking for C++ include time.h - found -- Looking for C++ include sys/types.h -- Looking for C++ include sys/types.h - found -- Looking for C++ include sys/times.h -- Looking for C++ include sys/times.h - found -- Looking for C++ include sys/time.h -- Looking for C++ include sys/time.h - found -- Looking for C++ include sys/resource.h -- Looking for C++ include sys/resource.h - found -- Looking for C++ include stdint.h -- Looking for C++ include stdint.h - found -- Looking for kill -- Looking for kill - found -- Looking for sysconf -- Looking for sysconf - found CMake Warning (dev) at src/openms/configh.cmake:204 (add_custom_command): The following keywords are not supported when using add_custom_command(OUTPUT): PRE_BUILD. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): src/openms/CMakeLists.txt:80 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Adding library OpenMS -- Adding library OpenMS - SUCCESS CMake Deprecation Warning at src/superhirn/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. CMake Warning (dev) at cmake/build_system_macros.cmake:90 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): src/superhirn/CMakeLists.txt:41 (find_boost) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost: /usr/include (found suitable version "1.83.0", minimum required is "1.48.0") -- Adding library SuperHirn CMake Warning (dev) at cmake/install_macros.cmake:72 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake/add_library_macros.cmake:200 (install_headers) src/superhirn/CMakeLists.txt:69 (openms_add_library) This warning is for project developers. Use -Wno-dev to suppress it. -- Adding library SuperHirn - SUCCESS CMake Deprecation Warning at src/openms_gui/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. CMake Warning (dev) at cmake/build_system_macros.cmake:90 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): src/openms_gui/CMakeLists.txt:80 (find_boost) This warning is for project developers. Use -Wno-dev to suppress it. -- Adding library OpenMS_GUI CMake Warning (dev) at cmake/install_macros.cmake:72 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake/add_library_macros.cmake:200 (install_headers) src/openms_gui/CMakeLists.txt:106 (openms_add_library) This warning is for project developers. Use -Wno-dev to suppress it. -- Adding library OpenMS_GUI - SUCCESS -- No resource file (/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.rc) found for INIFileEditor. No icon will be embedded. -- No resource file (/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.rc) found for SwathWizard. No icon will be embedded. -- No resource file (/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.rc) found for TOPPAS. No icon will be embedded. -- No resource file (/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.rc) found for TOPPView. No icon will be embedded. CMake Deprecation Warning at src/topp/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. CMake Deprecation Warning at src/utils/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. CMake Deprecation Warning at src/tests/CMakeLists.txt:35 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. CMake Deprecation Warning at doc/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- Documentation is built (-D ENABLE_DOCS=On). -- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen dot CMake Warning (dev) at doc/CMakeLists.txt:142 (exec_program): Policy CMP0153 is not set: The exec_program command should not be called. Run "cmake --help-policy CMP0153" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Use execute_process() instead. This warning is for project developers. Use -Wno-dev to suppress it. -- Enabled tutorials (-D ENABLE_TUTORIALS=On). CMake Deprecation Warning at doc/code_examples/CMakeLists.txt:38 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- -- ----------------------------------------------------------------- -- -- You have successfully configured OpenMS. -- -- For a full list of make targets execute: -- 'make targets' -- -- ----------------------------------------------------------------- -- -- Configuring done (7.2s) -- Generating done (2.8s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu # Prepare the xpm-formatted pixmaps for the Debian menu system. # Setting imagemagick to Build-Depends, for use of convert. convert src/openms_gui/source/VISUAL/ICONS/TOPPAS.png -resize 32x32 debian/TOPPAS.xpm convert src/openms_gui/source/VISUAL/ICONS/TOPPView.png -resize 32x32 debian/TOPPView.xpm make[1]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1' rm -f debian/libopenms-dev.debhelper.log debian/libopenms2.6.0.debhelper.log debian/openms-common.debhelper.log debian/openms-doc.debhelper.log debian/openms.debhelper.log debian/topp.debhelper.log debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1' # Build the libs and executable binaries # Build the documentation, which needs a running XWindow server. We # thus use the doc_minimal target. # # ATTENTION, as of 20200514, the pdfLatex compilation fails with error # ! LaTeX Error: Command `\Bbbk' already defined. # This is why we commented out the doc_tutorials target below. # See also the override_dh_auto_configure target above, that disables # that specific doc_tutorials target. VERBOSE=1 \ dh_auto_build -- \ OpenMS GUI TOPP UTILS cd obj-i686-linux-gnu && make -j1 "INSTALL=install --strip-program=true" OpenMS GUI TOPP UTILS VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 OpenMS make[3]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 53 make -f CMakeFiles/Makefile2 src/openms/CMakeFiles/OpenMS.dir/all make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/MRMScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/MRMScoring.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/MRMScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:194:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 194 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/MRMScoring.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/MRMScoring.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/StatsHelpers.h:69:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 69 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/Scoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/Scoring.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/ArrayOperations.c: In function 'void* checkedCalloc(size_t, size_t)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/ArrayOperations.c:29:61: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 29 | fprintf(stderr, "Error: %s\nAttempted to allocate %lu length of size %lu\n", strerror(errno), vectorLength, sizeOfType); | ~~^ ~~~~~~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/ArrayOperations.c:29:80: warning: format '%lu' expects argument of type 'long unsigned int', but argument 5 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 29 | fprintf(stderr, "Error: %s\nAttempted to allocate %lu length of size %lu\n", strerror(errno), vectorLength, sizeOfType); | ~~^ ~~~~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/StatsHelpers.h:69:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 69 | std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /usr/include/c++/14/complex:45, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/StatsHelpers.h:40: /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp: In function 'void OpenSwath::normalize(const std::vector&, double, std::vector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp:54:106: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = divides; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 54 | std::transform(intensities.begin(), intensities.end(), normalized_intensities.begin(), std::bind2nd(std::divides(), normalizer)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_function.h:1435: /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:194:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 194 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:194:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 194 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp [ 1%] Linking CXX shared library ../../lib/i386-linux-gnu/libOpenSwathAlgo.so cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathAlgo.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,--dependency-file=CMakeFiles/OpenSwathAlgo.dir/link.d -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libOpenSwathAlgo.so.2.6.0 -o ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/cmake -E cmake_symlink_library ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenSwathAlgo make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen_timestamp_deps make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Automatic MOC for target OpenMS cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/AutogenInfo.json release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/obj-i686-linux-gnu/src/openms/include/OpenMS/openms_data_path.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DECHARGING/ILPDCWrapper.h" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/src/openms/include/OpenMS/config.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/src/openms/include/OpenMS/openms_package_version.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationCID.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoPostScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmAverage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmRanks.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmWorst.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSScheduler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/HiddenMarkovModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDBoostGraph.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDConflictResolverAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDDecoyProbability.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDRipper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreGetterSetter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/MessagePasserFactory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PeptideProteinResolution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PercolatorFeatureSetHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PrecursorPurity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ProtonDistributionModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/SiriusAdapterAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/SiriusMSConverter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelBSpline.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelLinear.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelLowess.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MRM/MRMFragmentSelection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/IonMobilityScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMAssay.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeaturePicker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMRTNormalizer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScores.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SpectrumAddition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathQC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathWindowLoader.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/PIP/LocalLinearMap.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/PIP/PeakIntensityPredictor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifier.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureNode.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinInference.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/HyperScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/ModifiedPeptideGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/MorpheusScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/PScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlModificationsGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/SVM/SVMWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/IncludeExcludeTarget.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSProteinInference.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/XFDRAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/XQuestScores.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/ConsoleUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/INIUpdater.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/OpenSwathBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/ParameterInformation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/AAIndex.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/ToolHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/AASequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/CrossLinksDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DecoyGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzyme.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeProtein.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeRNA.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Element.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ElementDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/EnzymaticDigestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/EnzymaticDigestionLogModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetParser.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IntegerMassDecomposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/MassDecomposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModificationDefinition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModificationDefinitionsSet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModificationsDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModifiedNASequenceGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/NASequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ProteaseDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ProteaseDigestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/RNaseDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/RNaseDigestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Residue.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ResidueDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ResidueModification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Ribonucleotide.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/RibonucleotideDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Tagger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/WeightWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterAnalyzer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/AverageLinkage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusteringGrid.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/CompleteLinkage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/EuclideanSimilarity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/GridBasedCluster.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/GridBasedClustering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/SingleLinkage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/ClassTest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Constants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/EnumHelpers.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Exception.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Factory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/FactoryBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/FuzzyStringComparator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/GlobalExceptionHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Helpers.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/LogConfigHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Init.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/LogStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Macros.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/MacrosTest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/RAIICleanup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/StreamHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/TypeAsString.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/SingletonRegistry.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Types.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/UniqueIdIndexer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/VersionInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Adduct.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVMappingRule.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVMappingTerm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVMappings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVReference.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/BinaryTreeNode.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ChargePair.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Compomer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ConstRefVector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Date.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DistanceMatrix.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/FASTAContainer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/GridFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/KDTree.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/LPWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Map.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ListUtilsIO.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/MassExplainer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/MatchedIterator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Matrix.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Param.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/QTCluster.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/String.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/StringUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Utils/MapUtilities.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Utils/MatrixUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/PrecursorCorrection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/Deisotoper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/IsotopeDistributionCache.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/SplinePackage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/FastLowessSmoothing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilterAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/LowessSmoothing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationMethodFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/Base64.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/Bzip2Ifstream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/Bzip2InputStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CVMappingFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CachedMzML.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CompressedInputSource.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ChromeleonFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ControlledVocabulary.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CsvFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataAggregatingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataCachedConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataChainingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataSqlConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataStoringConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataTransformingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/NoopMSDataConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusFragmentAnnotation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusMzTabWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DTA2DFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DTAFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/EDTAFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ExperimentalDesignFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FASTAFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FeatureXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FileHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FileTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/GzipIfstream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/GzipInputStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/AcqusHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/FidHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLDecoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/CachedMzMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLDOMHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandlerHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteSwathHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/ParamXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/PTMXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/TraMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/UnimodXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/XQuestResultXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HDF5Connector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/IBSpectraFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/IdXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/IndexedMzMLFileLoader.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/InspectInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/InspectOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/KroenikFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/LibSVMEncoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MRMFeaturePickerFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MRMFeatureQCFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MS2File.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSNumpressCoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSPFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSstatsFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MsInspectFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzDataFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzIdentMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzQuantMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzTab.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzTabFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OMSSACSVFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OMSSAXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OPTIONS/FeatureFileOptions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OSWFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PTMXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ParamXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PeakTypeEstimator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepNovoInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepNovoOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepXMLFileMascot.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PercolatorOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ProtXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/QcMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SequestInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SVOutStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SequestOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SpecArrayFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SqMassFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SwathFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SqliteConnector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ToolDescriptionFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TextFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TraMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TransformationXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/UnimodXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzDataValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzIdentMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzQuantMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/TraMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/XMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XMassFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/SemanticValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XTandemInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XTandemXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ZlibCompression.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/INTERFACES/DataStructures.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/INTERFACES/IMSDataConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XQuestResultXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/INTERFACES/ISpectrumAccess.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/AreaIterator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/BaseFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ConsensusMap.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ConversionHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/DPeak.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/Feature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/FeatureHandle.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/FeatureMap.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MRMFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MSChromatogram.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MSExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MassTrace.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MSSpectrum.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/Peak1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/Peak2D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/PeakIndex.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/RangeManager.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/RangeUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/RichPeak2D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/SpectrumHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/StandardDeclarations.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/StandardTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/BSpline2d.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/BilinearInterpolation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/CubicSpline2d.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/LinearInterpolation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/GridSearch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/MSNumpress.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/MathFunctions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/NNLS/NNLS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/NonNegativeLeastSquaresSolver.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSAC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSACModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSACModelLinear.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSACModelQuadratic.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/SplineBisection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/AsymmetricStatistics.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/AveragePosition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/BasicStatistics.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GammaDistributionFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GaussFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GumbelDistributionFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/Histogram.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GumbelMaxLikelihoodFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/LinearRegression.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/LinearRegressionWithoutIntercept.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/QuadraticRegression.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/ROCCurve.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/RegressionUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/StatisticFunctions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Acquisition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/AbsoluteQuantitationStandards.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/AcquisitionInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/CVTerm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/CVTermList.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/CVTermListInterface.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DataArrays.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ContactPerson.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DataProcessing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Digestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DocumentIDTagger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DocumentIdentifier.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ExperimentalSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Gradient.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/HPLC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/AppliedProcessingStep.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DataProcessingSoftware.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DBSearchParam.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DataProcessingStep.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DataQuery.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentificationDataConverter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentifiedCompound.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentifiedSequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/MetaData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/MoleculeParentMatch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/MoleculeQueryMatch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ParentMolecule.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ParentMoleculeGroup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/QueryMatchGroup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ScoreType.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ScoredProcessingResult.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Identification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/IdentificationHit.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Instrument.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/InstrumentSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/IonDetector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/IonSource.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MSQuantifications.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MassAnalyzer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoInterface.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoInterfaceUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoRegistry.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Modification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/PeptideIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/PeptideHit.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/PeptideEvidence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Precursor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Product.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ProteinHit.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ProteinIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Sample.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SampleTreatment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ScanWindow.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Software.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SourceFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumLookup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Tagging.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/Contaminants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/DBSuitability.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/FWHM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/FragmentMassError.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/MissedCleavages.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/Ms2IdentificationRate.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/Ms2SpectrumStats.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/MzCalibration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/PeptideMass.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/QCBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/RTAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/TIC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/EGHModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/EGHFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/ICPLLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/O18Labeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/SILACLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/MSSim.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/RTSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/SimTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/BuildInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/ExternalProcess.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/File.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/FileWatcher.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/JavaInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/PythonInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/RWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/StopWatch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/SysInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/UpdateCheck.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderDefs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletConstants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePick.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/AScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/FIAMSScheduler.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/FalseDiscoveryRate.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/HiddenMarkovModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDDecoyProbability.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDMapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDMergerAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDRipper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDScoreGetterSetter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/MessagePasserFactory.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PeptideIndexing.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PeptideProteinResolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ProtonDistributionModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PrecursorPurity.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/SiriusMSConverter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MRM/MRMFragmentSelection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMAssay.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SONARScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/PIP/LocalLinearMap.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/HyperScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/ModifiedPeptideGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/MorpheusScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/PScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlReport.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/SVM/SimpleSVM.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/MRMMapping.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PSProteinInference.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/TargetedExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OPXLDataStructs.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OPXLHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/XQuestScores.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/ConsoleUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/INIUpdater.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/ParameterInformation.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/TOPPBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/ToolHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/AASequence.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/CrossLinksDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DecoyGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzyme.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzymeDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzymeProtein.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzymeRNA.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Element.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ElementDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/EnzymaticDigestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModificationDefinition.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModificationDefinitionsSet.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModificationsDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/NASequence.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ProteaseDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ProteaseDigestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/RNaseDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/RNaseDigestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Residue.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ResidueDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ResidueModification.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Ribonucleotide.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/RibonucleotideDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SimpleTSGXLMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Tagger.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/WeightWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/AverageLinkage.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/SingleLinkage.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Constants.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Exception.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/ClassTest.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/FuzzyStringComparator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Init.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/LogConfigHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/LogStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/PrecisionWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/ProgressLogger.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/RAIICleanup.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/SingletonRegistry.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/StreamHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/TypeAsString.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Types.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/UniqueIdGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/UniqueIdIndexer.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/UniqueIdInterface.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/VersionInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Adduct.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/BinaryTreeNode.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVMappingRule.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVMappingTerm.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVMappings.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVReference.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CalibrationData.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ChargePair.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Compomer.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ConvexHull2D.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DBoundingBox.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DIntervalBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DPosition.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DRange.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DataValue.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Date.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DateTime.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DefaultParamHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/FASTAContainer.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DistanceMatrix.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/GridFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/LPWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ListUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ListUtilsIO.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Map.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/MassExplainer.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/MatchedIterator.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Param.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Matrix.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/QTCluster.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/String.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/StringListUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/StringUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ToolDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/BASELINE/MorphologicalFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/InternalCalibration.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/TOFCalibration.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/SplinePackage.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/ID/IDFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/GaussFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/LowessSmoothing.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/LinearResampler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/MarkerMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/NLargest.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/Normalizer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/Scaler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/PeakMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/SqrtMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/TICFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/WindowMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/AbsoluteQuantitationMethodFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/Base64.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/Bzip2Ifstream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/Bzip2InputStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CVMappingFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CachedMzML.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ChromeleonFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CompressedInputSource.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ConsensusXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ControlledVocabulary.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CsvFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DTAFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DTA2DFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FASTAFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/EDTAFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ExperimentalDesignFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FeatureXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FileHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FileTypes.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/GzipIfstream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/GzipInputStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/AcqusHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/FidHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/PTMXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/ParamXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/TraMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/XMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HDF5Connector.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/IBSpectraFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/IdXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/InspectInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/InspectOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/KroenikFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/LibSVMEncoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MRMFeaturePickerFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MRMFeatureQCFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MS2File.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSNumpressCoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSPFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSPGenericFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSstatsFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotGenericFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotRemoteQuery.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MsInspectFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzDataFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzIdentMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzQuantMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzTab.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzTabFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OMSSACSVFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OMSSAXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OPTIONS/FeatureFileOptions.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OSWFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OPTIONS/PeakFileOptions.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PTMXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ParamXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PeakTypeEstimator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepNovoInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepNovoOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepXMLFileMascot.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PercolatorOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ProtXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/QcMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SVOutStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SequestInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SequestOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SpecArrayFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SqMassFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SqliteConnector.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SwathFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TextFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ToolDescriptionFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TraMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TransformationXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/UnimodXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzDataValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/SemanticValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/TraMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/XMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XMassFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XQuestResultXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XTandemInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XTandemXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ZlibCompression.cpp" AutoGen: Parsing "SRC:/src/openms/source/INTERFACES_IMPL/MockImplementation.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/AreaIterator.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/BaseFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ChromatogramPeak.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ChromatogramTools.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ConsensusFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ConsensusMap.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ConversionHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/DPeak.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/Feature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/FeatureHandle.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/FeatureMap.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MRMFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MRMTransitionGroup.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MSChromatogram.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MSExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MSSpectrum.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MassTrace.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/OnDiscMSExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/Peak1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/Peak2D.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/PeakIndex.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/RangeManager.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/RichPeak2D.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/SpectrumHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/StandardTypes.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/BSpline2d.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/BilinearInterpolation.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/EmgGradientDescent.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/CubicSpline2d.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/GridSearch.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/LinearInterpolation.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/MSNumpress.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/MathFunctions.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/NNLS/NNLS.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSAC.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSACModelLinear.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSACModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSACModelQuadratic.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/SplineBisection.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/AsymmetricStatistics.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/AveragePosition.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/BasicStatistics.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GammaDistributionFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GaussFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GumbelDistributionFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/Histogram.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/LinearRegression.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/QuadraticRegression.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/ROCCurve.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Acquisition.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/AcquisitionInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/CVTerm.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/CVTermList.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/CVTermListInterface.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ChromatogramSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ContactPerson.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DataArrays.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DataProcessing.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Digestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DocumentIDTagger.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DocumentIdentifier.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ExperimentalDesign.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ExperimentalSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Gradient.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/HPLC.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ID/IdentificationData.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ID/IdentificationDataConverter.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Identification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/IdentificationHit.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Instrument.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/InstrumentSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/IonDetector.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MSQuantifications.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/IonSource.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MassAnalyzer.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfoDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfoInterface.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfoRegistry.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Modification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/PeptideEvidence.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/PeptideHit.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/PeptideIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Product.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Precursor.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ProteinHit.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ProteinIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Sample.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SampleTreatment.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ScanWindow.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Software.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SourceFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumLookup.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumMetaDataLookup.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Tagging.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/Contaminants.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/DBSuitability.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/FWHM.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/FragmentMassError.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/MissedCleavages.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/Ms2IdentificationRate.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/Ms2SpectrumStats.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/MzCalibration.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/PeptideMass.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/QCBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/RTAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/TIC.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/DetectabilitySimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/DigestSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/EGHFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/EGHModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/IonizationSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/ITRAQLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/LabelFreeLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/MSSim.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/RTSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/RawMSSignalSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/ExternalProcess.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/File.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/FileWatcher.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/JavaInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/NetworkGetRequest.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/PythonInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/RWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/StopWatch.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/UpdateCheck.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/SysInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_FileWatcher.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/SYSTEM/FileWatcher.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -I/usr/include -I/usr/include/c++/14 -I/usr/include/i386-linux-gnu/c++/14 -I/usr/include/c++/14/backward -I/usr/lib/gcc/i686-linux-gnu/14/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_FileWatcher.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SYSTEM/FileWatcher.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_NetworkGetRequest.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -I/usr/include -I/usr/include/c++/14 -I/usr/include/i386-linux-gnu/c++/14 -I/usr/include/c++/14/backward -I/usr/lib/gcc/i686-linux-gnu/14/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_NetworkGetRequest.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -I/usr/include -I/usr/include/c++/14 -I/usr/include/i386-linux-gnu/c++/14 -I/usr/include/c++/14/backward -I/usr/lib/gcc/i686-linux-gnu/14/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_ExternalProcess.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/SYSTEM/ExternalProcess.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -I/usr/include -I/usr/include/c++/14 -I/usr/include/i386-linux-gnu/c++/14 -I/usr/include/c++/14/backward -I/usr/lib/gcc/i686-linux-gnu/14/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_ExternalProcess.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SYSTEM/ExternalProcess.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_FileWatcher.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_ExternalProcess.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_NetworkGetRequest.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/cmake -E touch /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/timestamp make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] creating build_config.h file ({event: PRE_BUILD}, {filename: build_config.h}) cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include/OpenMS/build_config_release.h /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include/OpenMS/build_config.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" Dependencies file "src/openms/OpenMS_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o -MF CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/mocs_compilation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/../../../../../src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp:10, from /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/mocs_compilation.cpp:2: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/../../../../../src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:134:38: note: by 'OpenMS::MascotRemoteQuery& OpenMS::MascotRemoteQuery::operator=(const OpenMS::MascotRemoteQuery&)' 134 | OPENMS_DLLAPI MascotRemoteQuery& operator=(const MascotRemoteQuery& rhs); | ^~~~~~~~ [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o -MF CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/INTERFACES_IMPL/MockImplementation.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/ClassTest.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/ClassTest.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ClassTest.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/ClassTest.cpp:35: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/ClassTest.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h: In member function 'void OpenMS::Internal::MzDataHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:98:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 98 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Constants.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Constants.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Constants.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Constants.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/Constants.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/Exception.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/FuzzyStringComparator.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp: In constructor 'OpenMS::Exception::GlobalExceptionHandler::GlobalExceptionHandler()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp:65:26: warning: 'void (* std::set_unexpected(unexpected_handler))()' is deprecated [-Wdeprecated-declarations] 65 | std::set_unexpected(terminate); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ In file included from /usr/include/c++/14/ios:41, from /usr/include/c++/14/ostream:40, from /usr/include/c++/14/iostream:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp:38: /usr/include/c++/14/exception:92:22: note: declared here 92 | unexpected_handler set_unexpected(unexpected_handler) _GLIBCXX_USE_NOEXCEPT; | ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/Init.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/LogConfigHandler.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/LogStream.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/PrecisionWrapper.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/ProgressLogger.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/RAIICleanup.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/SingletonRegistry.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/StreamHandler.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/TypeAsString.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/Types.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/UniqueIdGenerator.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/UniqueIdIndexer.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/UniqueIdInterface.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp:144:23: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 144 | result = String(__DATE__) + ", " + __TIME__; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp:144:42: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 144 | result = String(__DATE__) + ", " + __TIME__; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp: In static member function 'static OpenMS::VersionInfo::VersionDetails OpenMS::VersionInfo::getVersionStruct()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp:169:51: warning: implicitly-declared 'OpenMS::VersionInfo::VersionDetails& OpenMS::VersionInfo::VersionDetails::operator=(const OpenMS::VersionInfo::VersionDetails&)' is deprecated [-Wdeprecated-copy] 169 | result = VersionDetails::create(getVersion()); | ^ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/VersionInfo.h:79:7: note: because 'OpenMS::VersionInfo::VersionDetails' has user-provided 'OpenMS::VersionInfo::VersionDetails::VersionDetails(const OpenMS::VersionInfo::VersionDetails&)' 79 | VersionDetails(const VersionDetails & other): | ^~~~~~~~~~~~~~ [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/ExternalProcess.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/File.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/FileWatcher.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/JavaInfo.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/NetworkGetRequest.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/PythonInfo.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/RWrapper.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem 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-DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/SysInfo.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/UpdateCheck.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/AsymmetricStatistics.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/AveragePosition.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/BasicStatistics.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/GammaDistributionFitter.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/GaussFitter.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/GumbelDistributionFitter.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/Histogram.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/LinearRegression.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h:271:40: note: by 'OpenMS::Math::PosteriorErrorProbabilityModel& OpenMS::Math::PosteriorErrorProbabilityModel::operator=(const OpenMS::Math::PosteriorErrorProbabilityModel&)' 271 | PosteriorErrorProbabilityModel & operator=(const PosteriorErrorProbabilityModel & rhs); | ^~~~~~~~ [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/QuadraticRegression.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/ROCCurve.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/BilinearInterpolation.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/BSpline2d.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/CubicSpline2d.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/EmgGradientDescent.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/EmgGradientDescent.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/GridSearch.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/LinearInterpolation.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/MathFunctions.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/MSNumpress.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/RANSAC.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/RANSACModel.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/RANSACModelLinear.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/RANSACModelQuadratic.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/SplineBisection.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/NNLS/NNLS.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Adduct.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/BinaryTreeNode.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CalibrationData.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CalibrationData.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ChargePair.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Compomer.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConstRefVector.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/functional:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/bits/hashtable_policy.h:36, from /usr/include/c++/14/bits/hashtable.h:35, from /usr/include/c++/14/bits/unordered_map.h:33, from /usr/include/c++/14/unordered_map:41, from /usr/include/c++/14/functional:63: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ConvexHull2D.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CVMappingTerm.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CVMappingRule.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CVReference.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CVMappings.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DBoundingBox.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DIntervalBase.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DPosition.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DRange.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DataValue.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Date.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DateTime.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DefaultParamHandler.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DistanceMatrix.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/FASTAContainer.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/GridFeature.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/GridFeature.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_tree.h:65, from /usr/include/c++/14/set:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/GridFeature.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/GridFeature.cpp:35: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ListUtils.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ListUtilsIO.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/LPWrapper.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/LPWrapper.cpp: In member function 'void OpenMS::LPWrapper::readProblem(const OpenMS::String&, const OpenMS::String&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/LPWrapper.cpp:472:69: warning: unused parameter 'format' [-Wunused-parameter] 472 | void LPWrapper::readProblem(const String& filename, const String& format) // format=(LP,MPS,GLPK) | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/LPWrapper.cpp: In member function 'OpenMS::Int OpenMS::LPWrapper::solve(SolverParam&, OpenMS::Size)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/LPWrapper.cpp:529:37: warning: unused parameter 'solver_param' [-Wunused-parameter] 529 | Int LPWrapper::solve(SolverParam& solver_param, const Size | ~~~~~~~~~~~~~^~~~~~~~~~~~ [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Map.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/MassExplainer.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/MatchedIterator.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Matrix.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Param.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/QTCluster.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/String.cpp In file included from /usr/include/boost/spirit/home/qi/numeric/real.hpp:21, from /usr/include/boost/spirit/home/qi/numeric.hpp:17, from /usr/include/boost/spirit/home/qi.hpp:22, from /usr/include/boost/spirit/include/qi.hpp:16, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/StringUtils.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/String.cpp:38: In static member function 'static bool boost::spirit::qi::detail::real_impl::parse(Iterator&, const Iterator&, Attribute&, const RealPolicies&) [with Iterator = __gnu_cxx::__normal_iterator >; Attribute = double; T = double; RealPolicies = OpenMS::StringUtils::real_policies_NANfixed_]', inlined from 'bool boost::spirit::qi::any_real_parser::parse(Iterator&, const Iterator&, Context&, const Skipper&, T&) const [with Iterator = __gnu_cxx::__normal_iterator >; Context = boost::spirit::context, boost::spirit::locals<> >; Skipper = boost::spirit::qi::char_class >; T = double; RealPolicies = OpenMS::StringUtils::real_policies_NANfixed_]' at /usr/include/boost/spirit/home/qi/numeric/real.hpp:168:34, inlined from 'bool boost::spirit::qi::phrase_parse(Iterator&, Iterator, const Expr&, const Skipper&, skip_flag, Attr&) [with Iterator = __gnu_cxx::__normal_iterator >; Expr = real_parser >; Skipper = boost::proto::exprns_::expr >, 0>; Attr = double]' at /usr/include/boost/spirit/home/qi/parse.hpp:168:45, inlined from 'bool boost::spirit::qi::phrase_parse(Iterator&, Iterator, const Expr&, const Skipper&, Attr&) [with Iterator = __gnu_cxx::__normal_iterator >; Expr = real_parser >; Skipper = boost::proto::exprns_::expr >, 0>; Attr = double]' at /usr/include/boost/spirit/home/qi/parse.hpp:201:32, inlined from 'static double OpenMS::StringUtils::toDouble(const OpenMS::String&)' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/StringUtils.h:847:43, inlined from 'double OpenMS::String::toDouble() const' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/String.cpp:303:33: /usr/include/boost/spirit/home/qi/numeric/detail/real_impl.hpp:337:45: warning: 'n' may be used uninitialized [-Wmaybe-uninitialized] 337 | traits::assign_to(traits::negate(neg, n), attr); | ~~~~~~~~~~~~~~^~~~~~~~ /usr/include/boost/spirit/home/qi/numeric/detail/real_impl.hpp: In member function 'double OpenMS::String::toDouble() const': /usr/include/boost/spirit/home/qi/numeric/detail/real_impl.hpp:209:15: note: 'n' declared here 209 | T n; | ^ [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/StringListUtils.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/StringUtils.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}; _Tp = OpenMS::Internal::ToolExternalDetails]': /usr/include/c++/14/bits/alloc_traits.h:569:17: required from 'static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}; _Tp = OpenMS::Internal::ToolExternalDetails; allocator_type = std::allocator]' 569 | __a.construct(__p, std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_vector.h:1288:30: required from 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator; value_type = OpenMS::Internal::ToolExternalDetails]' 1288 | _Alloc_traits::construct(this->_M_impl, this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1289 | __x); | ~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:137:33: required from here 137 | external_details.push_back(details); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:55:33: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 55 | OPENMS_DLLAPI MappingParam& MappingParam::operator=(const MappingParam& rhs) | ^~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/c++/14/bits/c++allocator.h:33, from /usr/include/c++/14/bits/allocator.h:46, from /usr/include/c++/14/string:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:35: /usr/include/c++/14/bits/new_allocator.h:191:11: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(const OpenMS::Internal::ToolExternalDetails&)' first required here 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::_Construct(_Tp*, _Args&& ...) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Args = {OpenMS::Internal::ToolExternalDetails}]': /usr/include/c++/14/bits/stl_uninitialized.h:120:21: required from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = move_iterator; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' 120 | std::_Construct(std::__addressof(*__cur), *__first); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_uninitialized.h:137:32: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; bool _TrivialValueTypes = false]' 137 | { return std::__do_uninit_copy(__first, __last, __result); } | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_uninitialized.h:185:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = move_iterator; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' 184 | return std::__uninitialized_copy<__can_memmove && __assignable>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 | __uninit_copy(__first, __last, __result); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_uninitialized.h:373:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = move_iterator; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; _Tp = OpenMS::Internal::ToolExternalDetails]' 373 | return std::uninitialized_copy(__first, __last, __result); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_uninitialized.h:384:41: required from '_ForwardIterator std::__uninitialized_move_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = OpenMS::Internal::ToolExternalDetails*; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; _Allocator = allocator]' 384 | return std::__uninitialized_copy_a(_GLIBCXX_MAKE_MOVE_ITERATOR(__first), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 | _GLIBCXX_MAKE_MOVE_ITERATOR(__last), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 | __result, __alloc); | ~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/vector.tcc:969:34: required from 'void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator; iterator = std::vector::iterator]' 969 | std::__uninitialized_move_a(this->_M_impl._M_finish - __n, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 | this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~ 971 | this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~ 972 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_vector.h:1488:19: required from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator; iterator = std::vector::iterator; const_iterator = std::vector::const_iterator]' 1488 | _M_range_insert(begin() + __offset, __first, __last, | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1489 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:157:30: required from here 157 | external_details.insert(external_details.end(), other.external_details.begin(), other.external_details.end()); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:55:33: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 55 | OPENMS_DLLAPI MappingParam& MappingParam::operator=(const MappingParam& rhs) | ^~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/alloc_traits.h:33, from /usr/include/c++/14/ext/alloc_traits.h:34, from /usr/include/c++/14/bits/basic_string.h:39, from /usr/include/c++/14/string:54: /usr/include/c++/14/bits/stl_construct.h:119:7: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(OpenMS::Internal::ToolExternalDetails&&)' first required here 119 | ::new((void*)__p) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/AbsoluteQuantitationStandards.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Acquisition.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/AcquisitionInfo.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/CVTerm.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/CVTermList.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/CVTermListInterface.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ChromatogramSettings.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ChromatogramSettings.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ContactPerson.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/DataArrays.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/DataProcessing.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Digestion.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/DocumentIDTagger.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/DocumentIdentifier.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ExperimentalDesign.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ExperimentalDesign.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ExperimentalSettings.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Gradient.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/HPLC.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Identification.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/IdentificationHit.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Instrument.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/InstrumentSettings.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/IonDetector.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/IonSource.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MSQuantifications.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MSQuantifications.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MSQuantifications.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MSQuantifications.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MassAnalyzer.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MetaInfo.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MetaInfoDescription.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MetaInfoInterface.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MetaInfoRegistry.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Modification.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/PeptideEvidence.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/PeptideHit.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/PeptideIdentification.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Precursor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Precursor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Product.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ProteinHit.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ProteinIdentification.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ProteinIdentification.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ProteinIdentification.cpp:35: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Sample.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SampleTreatment.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ScanWindow.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Software.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SourceFile.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumIdentification.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumLookup.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumLookup.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumMetaDataLookup.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumMetaDataLookup.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumSettings.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumSettings.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Tagging.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ID/IdentificationData.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ID/IdentificationData.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/refwrap.h:39, from /usr/include/c++/14/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MetaInfoInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/DataProcessingStep.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/vector:62: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ID/IdentificationDataConverter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationDataConverter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ID/IdentificationDataConverter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/refwrap.h:39, from /usr/include/c++/14/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MetaInfoInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/DataProcessingStep.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/vector:62: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/AreaIterator.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/BaseFeature.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/BaseFeature.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/BaseFeature.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusFeature.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusFeature.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusFeature.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusMap.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusMap.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusMap.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/functional:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusMap.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/bits/hashtable_policy.h:36, from /usr/include/c++/14/bits/hashtable.h:35, from /usr/include/c++/14/bits/unordered_map.h:33, from /usr/include/c++/14/unordered_map:41, from /usr/include/c++/14/functional:63: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConversionHelper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConversionHelper.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConversionHelper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/DPeak.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/DPeak.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Feature.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Feature.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/FeatureHandle.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/FeatureHandle.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/FeatureHandle.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/FeatureMap.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/FeatureMap.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MassTrace.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MassTrace.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MRMFeature.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MRMFeature.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MRMTransitionGroup.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MRMTransitionGroup.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSExperiment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSExperiment.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSExperiment.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSSpectrum.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSSpectrum.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:51: In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = double; _Up = double; bool _IsMove = true]', inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = true; _II = double*; _OI = double*]' at /usr/include/c++/14/bits/stl_algobase.h:521:30, inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = true; _II = double*; _OI = double*]' at /usr/include/c++/14/bits/stl_algobase.h:548:42, inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = true; _II = double*; _OI = double*]' at /usr/include/c++/14/bits/stl_algobase.h:555:31, inlined from '_OI std::move(_II, _II, _OI) [with _II = double*; _OI = double*]' at /usr/include/c++/14/bits/stl_algobase.h:683:38, inlined from 'OpenMS::DPosition::DPosition(OpenMS::DPosition&&) [with unsigned int D = 1; TCoordinateType = double]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:115:16, inlined from 'std::_Require >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = OpenMS::DPosition<1>]' at /usr/include/c++/14/bits/move.h:222:11, inlined from 'void std::pair<_T1, _T2>::swap(std::pair<_T1, _T2>&) [with _T1 = OpenMS::DPosition<1>; _T2 = unsigned int]' at /usr/include/c++/14/bits/stl_pair.h:308:6, inlined from 'typename std::enable_if, std::__is_swappable<_T2> >::value>::type std::swap(pair<_T1, _T2>&, pair<_T1, _T2>&) [with _T1 = OpenMS::DPosition<1>; _T2 = unsigned int]' at /usr/include/c++/14/bits/stl_pair.h:1091:15, inlined from 'void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator, unsigned int>*, vector, unsigned int> > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator, unsigned int>*, vector, unsigned int> > >]' at /usr/include/c++/14/bits/stl_algobase.h:185:11, inlined from '_RandomAccessIterator std::_V2::__rotate(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int>*, std::vector, unsigned int> > >]' at /usr/include/c++/14/bits/stl_algo.h:1312:19: /usr/include/c++/14/bits/stl_algobase.h:452:30: warning: 'void* __builtin_memcpy(void*, const void*, unsigned int)' forming offset 8 is out of the bounds [0, 8] of object '__tmp' with type 'OpenMS::DPosition<1>' [-Warray-bounds=] 452 | __builtin_memmove(__result, __first, sizeof(_Tp) * _Num); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/new_allocator.h:36, from /usr/include/i386-linux-gnu/c++/14/bits/c++allocator.h:33, from /usr/include/c++/14/bits/allocator.h:46, from /usr/include/c++/14/string:43: /usr/include/c++/14/bits/move.h: In function '_RandomAccessIterator std::_V2::__rotate(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int>*, std::vector, unsigned int> > >]': /usr/include/c++/14/bits/move.h:222:11: note: '__tmp' declared here 222 | _Tp __tmp = _GLIBCXX_MOVE(__a); | ^~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/OnDiscMSExperiment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/OnDiscMSExperiment.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/INTERFACES/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h:37: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Peak1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Peak1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Peak2D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Peak2D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/PeakIndex.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/RangeManager.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/RichPeak2D.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/StandardTypes.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ChromatogramPeak.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ChromatogramPeak.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ChromatogramPeak.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSChromatogram.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSChromatogram.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ChromatogramTools.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ChromatogramTools.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/SpectrumHelper.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/AASequence.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/CrossLinksDB.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/DecoyGenerator.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Element.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Element.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:39: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ElementDB.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ElementDB.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ElementDB.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ElementDB.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_tree.h:65, from /usr/include/c++/14/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp:36: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/EnzymaticDigestion.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/DigestionEnzyme.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/DigestionEnzymeProtein.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/DigestionEnzymeRNA.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/DigestionEnzymeDB.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ModificationDefinition.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ModificationDefinitionsSet.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ModificationsDB.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/NASequence.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h:72:35: note: by 'OpenMS::NucleicAcidSpectrumGenerator& OpenMS::NucleicAcidSpectrumGenerator::operator=(const OpenMS::NucleicAcidSpectrumGenerator&)' 72 | NucleicAcidSpectrumGenerator& operator=(const NucleicAcidSpectrumGenerator& source); | ^~~~~~~~ [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ProteaseDB.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ProteaseDigestion.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Residue.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ResidueDB.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ResidueModification.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/RNaseDB.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/RNaseDigestion.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/RNaseDigestion.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/RNaseDigestion.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Ribonucleotide.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/RibonucleotideDB.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/RNaseDigestion.cpp:35: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Ribonucleotide.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/RibonucleotideDB.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:79:25: note: by 'OpenMS::SpectrumAnnotator& OpenMS::SpectrumAnnotator::operator=(const OpenMS::SpectrumAnnotator&)' 79 | SpectrumAnnotator & operator=(const SpectrumAnnotator & tsg); | ^~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SimpleTSGXLMS.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SimpleTSGXLMS.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/bits/stl_tree.h:63, from /usr/include/c++/14/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:38: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_tree.h:65: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:115:23: note: by 'OpenMS::SimpleTSGXLMS& OpenMS::SimpleTSGXLMS::operator=(const OpenMS::SimpleTSGXLMS&)' 115 | SimpleTSGXLMS & operator=(const SimpleTSGXLMS & tsg); | ^~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_tree.h:65, from /usr/include/c++/14/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/bits/stl_tree.h:63: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:205:39: note: by 'OpenMS::SvmTheoreticalSpectrumGenerator& OpenMS::SvmTheoreticalSpectrumGenerator::operator=(const OpenMS::SvmTheoreticalSpectrumGenerator&)' 205 | SvmTheoreticalSpectrumGenerator & operator=(const SvmTheoreticalSpectrumGenerator & tsg); | ^~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MetaInfoDescription.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataArrays.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:40: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:205:39: note: by 'OpenMS::SvmTheoreticalSpectrumGenerator& OpenMS::SvmTheoreticalSpectrumGenerator::operator=(const OpenMS::SvmTheoreticalSpectrumGenerator&)' 205 | SvmTheoreticalSpectrumGenerator & operator=(const SvmTheoreticalSpectrumGenerator & tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:105:46: note: by 'OpenMS::SvmTheoreticalSpectrumGeneratorTrainer& OpenMS::SvmTheoreticalSpectrumGeneratorTrainer::operator=(const OpenMS::SvmTheoreticalSpectrumGeneratorTrainer&)' 105 | SvmTheoreticalSpectrumGeneratorTrainer & operator=(const SvmTheoreticalSpectrumGeneratorTrainer & tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:66:17: note: by 'OpenMS::SqrtMower& OpenMS::SqrtMower::operator=(const OpenMS::SqrtMower&)' 66 | SqrtMower & operator=(const SqrtMower & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp: In member function 'void OpenMS::SvmTheoreticalSpectrumGeneratorTrainer::trainModel(const OpenMS::PeakMap&, const std::vector&, OpenMS::String, OpenMS::Int)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:797:28: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 797 | std::random_shuffle(training_data_by_class[0].begin(), training_data_by_class[0].end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:39: /usr/include/c++/14/bits/stl_algo.h:4492:5: note: declared here 4492 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:798:28: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 798 | std::random_shuffle(training_data_by_class[1].begin(), training_data_by_class[1].end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_algo.h:4492:5: note: declared here 4492 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:205:39: note: by 'OpenMS::SvmTheoreticalSpectrumGenerator& OpenMS::SvmTheoreticalSpectrumGenerator::operator=(const OpenMS::SvmTheoreticalSpectrumGenerator&)' 205 | SvmTheoreticalSpectrumGenerator & operator=(const SvmTheoreticalSpectrumGenerator & tsg); | ^~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Tagger.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Tagger.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Tagger.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Tagger.cpp:35: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_tree.h:65, from /usr/include/c++/14/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/bits/stl_tree.h:63, from /usr/include/c++/14/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:38: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_tree.h:65: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:90:42: note: by 'OpenMS::TheoreticalSpectrumGeneratorXLMS& OpenMS::TheoreticalSpectrumGeneratorXLMS::operator=(const OpenMS::TheoreticalSpectrumGeneratorXLMS&)' 90 | TheoreticalSpectrumGeneratorXLMS & operator=(const TheoreticalSpectrumGeneratorXLMS & tsg); | ^~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/WeightWrapper.cpp [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/refwrap.h:39, from /usr/include/c++/14/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:39: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp:35: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h:39: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataTransformingConsumer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataTransformingConsumer.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataAggregatingConsumer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataAggregatingConsumer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/CachedMzMLHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataCachedConsumer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp:35: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataStoringConsumer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataSqlConsumer.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusFragmentAnnotation.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusMzTabWriter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp:35: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:45, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/boost/assert/source_location.hpp:15, from /usr/include/boost/exception/exception.hpp:9, from /usr/include/boost/throw_exception.hpp:21, from /usr/include/boost/polymorphic_cast.hpp:79, from /usr/include/boost/cast.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:37: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here 55 | public BaseModel<1> | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/AcqusHandler.cpp [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/CachedMzMLHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp:35: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/FidHandler.cpp [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h:39: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_tree.h:65, from /usr/include/c++/14/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/bits/stl_tree.h:63: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:38: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h: In member function 'void OpenMS::Internal::MzDataHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:98:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 98 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLHelper.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ControlledVocabulary.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLDOMHandler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp:35: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MSQuantifications.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Helpers.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:37: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/refwrap.h:39, from /usr/include/c++/14/vector:68: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp: In member function 'void OpenMS::Internal::MzMLHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp:94:18: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 94 | options_ = opt; | ^~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandlerHelper.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h:39: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h:50: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/bits/stl_tree.h:63, from /usr/include/c++/14/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:37: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_tree.h:65: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h: In member function 'void OpenMS::Internal::MzXMLHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:103:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 103 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/PTMXMLHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ParamXMLHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}; _Tp = OpenMS::Internal::ToolExternalDetails]': /usr/include/c++/14/bits/alloc_traits.h:569:17: required from 'static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}; _Tp = OpenMS::Internal::ToolExternalDetails; allocator_type = std::allocator]' 569 | __a.construct(__p, std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_vector.h:1288:30: required from 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator; value_type = OpenMS::Internal::ToolExternalDetails]' 1288 | _Alloc_traits::construct(this->_M_impl, this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1289 | __x); | ~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp:194:39: required from here 194 | td_.external_details.push_back(tde_); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:72:35: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 72 | OPENMS_DLLAPI MappingParam& operator=(const MappingParam& rhs); | ^~~~~~~~ In file included from /usr/include/i386-linux-gnu/c++/14/bits/c++allocator.h:33, from /usr/include/c++/14/bits/allocator.h:46, from /usr/include/c++/14/string:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h:37: /usr/include/c++/14/bits/new_allocator.h:191:11: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(const OpenMS::Internal::ToolExternalDetails&)' first required here 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolDescription; _Args = {const OpenMS::Internal::ToolDescription&}; _Tp = OpenMS::Internal::ToolDescription]': /usr/include/c++/14/bits/alloc_traits.h:569:17: required from 'static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolDescription; _Args = {const OpenMS::Internal::ToolDescription&}; _Tp = OpenMS::Internal::ToolDescription; allocator_type = std::allocator]' 569 | __a.construct(__p, std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_vector.h:1288:30: required from 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenMS::Internal::ToolDescription; _Alloc = std::allocator; value_type = OpenMS::Internal::ToolDescription]' 1288 | _Alloc_traits::construct(this->_M_impl, this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1289 | __x); | ~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp:200:26: required from here 200 | td_vec_.push_back(td_); | ~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:122:26: warning: implicitly-declared 'OpenMS::Internal::ToolDescriptionInternal::ToolDescriptionInternal(const OpenMS::Internal::ToolDescriptionInternal&)' is deprecated [-Wdeprecated-copy] 122 | struct OPENMS_DLLAPI ToolDescription : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:99:32: note: because 'OpenMS::Internal::ToolDescriptionInternal' has user-provided 'OpenMS::Internal::ToolDescriptionInternal& OpenMS::Internal::ToolDescriptionInternal::operator=(const OpenMS::Internal::ToolDescriptionInternal&)' 99 | ToolDescriptionInternal& operator=(const ToolDescriptionInternal& rhs); | ^~~~~~~~ /usr/include/c++/14/bits/new_allocator.h:191:11: note: synthesized method 'OpenMS::Internal::ToolDescription::ToolDescription(const OpenMS::Internal::ToolDescription&)' first required here 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/TraMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/TraMLHandler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/TraMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/TraMLHandler.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/XMLHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/XMLValidator.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/MzMLValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/MzDataValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/SemanticValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/TraMLValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/OPTIONS/FeatureFileOptions.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/OPTIONS/PeakFileOptions.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/AbsoluteQuantitationMethodFile.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/AbsoluteQuantitationStandards.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/TextFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/CsvFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/Base64.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/Bzip2Ifstream.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/Bzip2InputStream.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/Bzip2InputStream.cpp: In member function 'virtual XMLSize_t OpenMS::Bzip2InputStream::readBytes(XMLByte*, XMLSize_t)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/Bzip2InputStream.cpp:73:71: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 73 | XMLSize_t actual_read = (XMLSize_t) bzip2_->read((char *)fill_it, static_cast(max_to_read)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/CachedMzML.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/CachedMzML.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/CachedMzML.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ChromeleonFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ChromeleonFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ChromeleonFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ChromeleonFile.h:38: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/CompressedInputSource.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/CVMappingFile.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ConsensusXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ConsensusXMLFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_tree.h:65, from /usr/include/c++/14/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/bits/stl_tree.h:63: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ControlledVocabulary.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/CsvFile.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DTA2DFile.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DTAFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DTAFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DTAFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DTAFile.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/EDTAFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp:35: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp: In member function 'void OpenMS::EDTAFile::load(const OpenMS::String&, OpenMS::ConsensusMap&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp:162:43: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 162 | consensus_map.getColumnHeaders()[0] = desc; | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp:282:45: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 282 | consensus_map.getColumnHeaders()[i] = fd; | ^~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ExperimentalDesignFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ExperimentalDesignFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FASTAFile.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FeatureXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FeatureXMLFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/FeatureFileOptions.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FeatureXMLFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FeatureXMLFile.cpp:35: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DTAFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:35: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h: In member function 'void OpenMS::Internal::MzDataHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:98:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 98 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h: At global scope: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:61:23: note: by 'OpenMS::MascotGenericFile& OpenMS::MascotGenericFile::operator=(const OpenMS::MascotGenericFile&)' 61 | class OPENMS_DLLAPI MascotGenericFile : | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MsInspectFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:51: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp: In member function 'void OpenMS::FileHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:504:16: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 504 | options_ = options; | ^~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp: In member function 'bool OpenMS::FileHandler::loadExperiment(const OpenMS::String&, OpenMS::PeakMap&, OpenMS::FileTypes::Type, OpenMS::ProgressLogger::LogType, bool, bool)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:599:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 599 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:609:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 609 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:619:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 619 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:628:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 628 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp: In member function 'void OpenMS::FileHandler::storeExperiment(const OpenMS::String&, const OpenMS::PeakMap&, OpenMS::ProgressLogger::LogType)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:698:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 698 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:707:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 707 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:725:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 725 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:743:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 743 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileTypes.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/GzipIfstream.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/GzipInputStream.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/GzipInputStream.cpp: In member function 'virtual XMLSize_t OpenMS::GzipInputStream::readBytes(XMLByte*, XMLSize_t)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/GzipInputStream.cpp:74:70: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 74 | XMLSize_t actual_read = (XMLSize_t) gzip_->read((char *)fill_it, static_cast(max_to_read)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HDF5Connector.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/IBSpectraFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:36: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h:60:38: note: by 'OpenMS::ItraqFourPlexQuantitationMethod& OpenMS::ItraqFourPlexQuantitationMethod::operator=(const OpenMS::ItraqFourPlexQuantitationMethod&)' 60 | ItraqFourPlexQuantitationMethod& operator=(const ItraqFourPlexQuantitationMethod& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h:62:40: note: by 'OpenMS::ItraqEightPlexQuantitationMethod& OpenMS::ItraqEightPlexQuantitationMethod::operator=(const OpenMS::ItraqEightPlexQuantitationMethod&)' 62 | ItraqEightPlexQuantitationMethod & operator=(const ItraqEightPlexQuantitationMethod& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTSixPlexQuantitationMethod& OpenMS::TMTSixPlexQuantitationMethod::operator=(const OpenMS::TMTSixPlexQuantitationMethod&)' 62 | TMTSixPlexQuantitationMethod & operator=(const TMTSixPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IdXMLFile.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/IndexedMzMLFileLoader.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/IndexedMzMLFileLoader.h:37: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp: In member function 'void OpenMS::IndexedMzMLFileLoader::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp:60:18: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 60 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/InspectInfile.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/InspectOutfile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/InspectOutfile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/InspectOutfile.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/InspectOutfile.cpp:41: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/KroenikFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/KroenikFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/KroenikFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/KroenikFile.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/LibSVMEncoder.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MRMFeaturePickerFile.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MRMFeatureQCFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MRMFeatureQCFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MRMFeatureQCFile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/TextFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/CsvFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MRMFeatureQCFile.cpp:35: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MS2File.cpp [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSNumpressCoder.cpp [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSPFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSPFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPFile.h:72:15: note: by 'OpenMS::MSPFile& OpenMS::MSPFile::operator=(const OpenMS::MSPFile&)' 72 | MSPFile & operator=(const MSPFile & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSPFile.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSPGenericFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSPGenericFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h:38: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h:67:23: note: by 'OpenMS::MSPGenericFile& OpenMS::MSPGenericFile::operator=(const OpenMS::MSPGenericFile&)' 67 | class OPENMS_DLLAPI MSPGenericFile : | ^~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSstatsFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSstatsFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSstatsFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotInfile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotInfile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotInfile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotGenericFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotGenericFile.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:61:23: note: by 'OpenMS::MascotGenericFile& OpenMS::MascotGenericFile::operator=(const OpenMS::MascotGenericFile&)' 61 | class OPENMS_DLLAPI MascotGenericFile : | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotGenericFile.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotGenericFile.cpp:35: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:134:38: note: by 'OpenMS::MascotRemoteQuery& OpenMS::MascotRemoteQuery::operator=(const OpenMS::MascotRemoteQuery&)' 134 | OPENMS_DLLAPI MascotRemoteQuery& operator=(const MascotRemoteQuery& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp: In member function 'void OpenMS::MascotRemoteQuery::login()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:182:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 182 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qobject.h:47, from /usr/include/i386-linux-gnu/qt5/QtCore/QObject:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:38: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1508:20: note: declared here 1508 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:188:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 188 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1508:20: note: declared here 1508 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:194:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 194 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1508:20: note: declared here 1508 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:199:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 199 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1508:20: note: declared here 1508 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:204:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 204 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1508:20: note: declared here 1508 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:209:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 209 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1508:20: note: declared here 1508 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:214:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 214 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1508:20: note: declared here 1508 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:219:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 219 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1508:20: note: declared here 1508 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:224:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 224 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1508:20: note: declared here 1508 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:229:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 229 | loginbytes.append("--" + boundary + "--\r\n"); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1508:20: note: declared here 1508 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp: In member function 'void OpenMS::MascotRemoteQuery::execQuery()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:355:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 355 | querybytes.append("--" + boundary + "--\n"); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1508:20: note: declared here 1508 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:360:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 360 | querybytes.append("--" + boundary + "--\n"); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1508:20: note: declared here 1508 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotXMLFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_tree.h:65, from /usr/include/c++/14/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/bits/stl_tree.h:63: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MsInspectFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MsInspectFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MsInspectFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MsInspectFile.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzDataFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzDataFile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SYSTEM/File.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzDataFile.cpp:35: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h: In member function 'void OpenMS::Internal::MzDataHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:98:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 98 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzDataFile.cpp: In member function 'void OpenMS::MzDataFile::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzDataFile.cpp:65:18: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 65 | options_ = options; | ^~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzIdentMLFile.cpp [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzMLFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzMLFile.cpp:35: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzMLFile.cpp: In member function 'void OpenMS::MzMLFile::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzMLFile.cpp:72:16: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 72 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzQuantMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MSQuantifications.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzQuantMLFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzQuantMLFile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzQuantMLFile.cpp:35: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTab.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTab.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/SVOutStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTab.cpp:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:485:68: required from here 485 | IDFilter::FilterPeptideEvidences(*this,peptides); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:726:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 726 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/14/bits/stl_function.h:1043:5: note: declared here 1043 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' 830 | keepMatchingItems(id_it->getHits(), score_filter); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1116:24: required from here 1116 | filterHitsByScore(experiment.getProteinIdentifications(), | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1117 | protein_threshold_score); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/14/bits/stl_function.h:1043:5: note: declared here 1043 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' 830 | keepMatchingItems(id_it->getHits(), score_filter); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1125:26: required from here 1125 | filterHitsByScore(exp_it->getPeptideIdentifications(), | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1126 | peptide_threshold_score); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/14/bits/stl_function.h:1043:5: note: declared here 1043 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:571:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' 571 | keepMatchingItems(item.getHits(), pred); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1184:30: required from here 1184 | keepMatchingItemsUnroll(pep_ids, best_per_peptide); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/14/bits/stl_function.h:1043:5: note: declared here 1043 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' 965 | keepMatchingItems(id_it.getHits(), acc_filter); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1332:31: required from here 1332 | keepHitsMatchingProteins(experiment.getProteinIdentifications(), | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1333 | accessions); | ~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/14/bits/stl_function.h:1043:5: note: declared here 1043 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' 965 | keepMatchingItems(id_it.getHits(), acc_filter); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1342:35: required from here 1342 | keepHitsMatchingProteins(exp_it->getPeptideIdentifications(), | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1343 | accessions); | ~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/14/bits/stl_function.h:1043:5: note: declared here 1043 | not1(const _Predicate& __pred) | ^~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTabFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTabFile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTabFile.cpp:35: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzXMLFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzXMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzXMLFile.cpp:35: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h: In member function 'void OpenMS::Internal::MzXMLHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:103:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 103 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzXMLFile.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzXMLFile.cpp: In member function 'void OpenMS::MzXMLFile::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzXMLFile.cpp:64:18: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 64 | options_ = options; | ^~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/OMSSACSVFile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/OMSSAXMLFile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/OSWFile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ParamXMLFile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PTMXMLFile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PeakTypeEstimator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/PeakTypeEstimator.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PeakTypeEstimator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PepNovoInfile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PepNovoOutfile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PepXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/PepXMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PepXMLFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_tree.h:65, from /usr/include/c++/14/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/PepXMLFile.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/PepXMLFile.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/bits/stl_tree.h:63: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PepXMLFileMascot.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PercolatorOutfile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/PercolatorOutfile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PercolatorOutfile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ProtXMLFile.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/QcMLFile.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SequestInfile.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SequestOutfile.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SpecArrayFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/SpecArrayFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SpecArrayFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/SpecArrayFile.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SqliteConnector.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SqMassFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/SqMassFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SqMassFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SwathFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SwathFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/SwathMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/SwathFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SwathFile.cpp:35: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SwathFile.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here 55 | public BaseModel<1> | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SVOutStream.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/TextFile.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ToolDescriptionFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ToolDescriptionFile.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ToolDescriptionFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::_Construct(_Tp*, _Args&& ...) [with _Tp = OpenMS::Internal::ToolDescription; _Args = {OpenMS::Internal::ToolDescription&}]': /usr/include/c++/14/bits/stl_uninitialized.h:120:21: required from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*]' 120 | std::_Construct(std::__addressof(*__cur), *__first); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_uninitialized.h:137:32: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*; bool _TrivialValueTypes = false]' 137 | { return std::__do_uninit_copy(__first, __last, __result); } | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_uninitialized.h:185:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*]' 184 | return std::__uninitialized_copy<__can_memmove && __assignable>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 | __uninit_copy(__first, __last, __result); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_uninitialized.h:373:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*; _Tp = OpenMS::Internal::ToolDescription]' 373 | return std::uninitialized_copy(__first, __last, __result); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/vector.tcc:257:35: required from 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = OpenMS::Internal::ToolDescription; _Alloc = std::allocator]' 257 | std::__uninitialized_copy_a(__x._M_impl._M_start + size(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 | __x._M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~ 259 | this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~ 260 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ToolDescriptionFile.cpp:55:39: required from here 55 | tds = handler.getToolDescriptions(); | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:122:26: warning: implicitly-declared 'OpenMS::Internal::ToolDescriptionInternal::ToolDescriptionInternal(const OpenMS::Internal::ToolDescriptionInternal&)' is deprecated [-Wdeprecated-copy] 122 | struct OPENMS_DLLAPI ToolDescription : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:99:32: note: because 'OpenMS::Internal::ToolDescriptionInternal' has user-provided 'OpenMS::Internal::ToolDescriptionInternal& OpenMS::Internal::ToolDescriptionInternal::operator=(const OpenMS::Internal::ToolDescriptionInternal&)' 99 | ToolDescriptionInternal& operator=(const ToolDescriptionInternal& rhs); | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_tempbuf.h:61, from /usr/include/c++/14/bits/stl_algo.h:69, from /usr/include/c++/14/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ToolDescriptionFile.h:37: /usr/include/c++/14/bits/stl_construct.h:119:7: note: synthesized method 'OpenMS::Internal::ToolDescription::ToolDescription(const OpenMS::Internal::ToolDescription&)' first required here 119 | ::new((void*)__p) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::_Construct(_Tp*, _Args&& ...) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}]': /usr/include/c++/14/bits/stl_uninitialized.h:120:21: required from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' 120 | std::_Construct(std::__addressof(*__cur), *__first); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_uninitialized.h:137:32: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; bool _TrivialValueTypes = false]' 137 | { return std::__do_uninit_copy(__first, __last, __result); } | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_uninitialized.h:185:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' 184 | return std::__uninitialized_copy<__can_memmove && __assignable>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 | __uninit_copy(__first, __last, __result); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_uninitialized.h:373:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; _Tp = OpenMS::Internal::ToolExternalDetails]' 373 | return std::uninitialized_copy(__first, __last, __result); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_vector.h:606:31: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/include/c++/14/bits/stl_uninitialized.h:120:21: required from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*]' 120 | std::_Construct(std::__addressof(*__cur), *__first); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_uninitialized.h:137:32: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*; bool _TrivialValueTypes = false]' 137 | { return std::__do_uninit_copy(__first, __last, __result); } | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_uninitialized.h:185:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*]' 184 | return std::__uninitialized_copy<__can_memmove && __assignable>:: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 | __uninit_copy(__first, __last, __result); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_uninitialized.h:373:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*; _Tp = OpenMS::Internal::ToolDescription]' 373 | return std::uninitialized_copy(__first, __last, __result); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/vector.tcc:257:35: required from 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = OpenMS::Internal::ToolDescription; _Alloc = std::allocator]' 257 | std::__uninitialized_copy_a(__x._M_impl._M_start + size(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 | __x._M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~ 259 | this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~ 260 | _M_get_Tp_allocator()); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ToolDescriptionFile.cpp:55:39: required from here 55 | tds = handler.getToolDescriptions(); | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:72:35: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 72 | OPENMS_DLLAPI MappingParam& operator=(const MappingParam& rhs); | ^~~~~~~~ /usr/include/c++/14/bits/stl_construct.h:119:7: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(const OpenMS::Internal::ToolExternalDetails&)' first required here 119 | ::new((void*)__p) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/TraMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/TraMLFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/TraMLFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/TraMLFile.cpp:35: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/TransformationXMLFile.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/UnimodXMLFile.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XMassFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMassFile.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XMassFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/AcqusHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMassFile.h:38: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XMLFile.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XQuestResultXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XQuestResultXMLFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XQuestResultXMLFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XQuestResultXMLFile.cpp:34: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XTandemInfile.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XTandemXMLFile.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ZlibCompression.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:84:31: note: by 'OpenMS::IsobaricChannelExtractor& OpenMS::IsobaricChannelExtractor::operator=(const OpenMS::IsobaricChannelExtractor&)' 84 | IsobaricChannelExtractor& operator=(const IsobaricChannelExtractor& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTTenPlexQuantitationMethod& OpenMS::TMTTenPlexQuantitationMethod::operator=(const OpenMS::TMTTenPlexQuantitationMethod&)' 62 | TMTTenPlexQuantitationMethod & operator=(const TMTTenPlexQuantitationMethod& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h:62:39: note: by 'OpenMS::TMTElevenPlexQuantitationMethod& OpenMS::TMTElevenPlexQuantitationMethod::operator=(const OpenMS::TMTElevenPlexQuantitationMethod&)' 62 | TMTElevenPlexQuantitationMethod & operator=(const TMTElevenPlexQuantitationMethod& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp: In member function 'void OpenMS::IsobaricChannelExtractor::registerChannelsInOutputMap_(OpenMS::ConsensusMap&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:751:49: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 751 | consensus_map.getColumnHeaders()[index] = channel_as_map; | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Matrix.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp:35: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifier.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifier.h:66:25: note: by 'OpenMS::IsobaricQuantifier& OpenMS::IsobaricQuantifier::operator=(const OpenMS::IsobaricQuantifier&)' 66 | IsobaricQuantifier& operator=(const IsobaricQuantifier& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h:62:40: note: by 'OpenMS::ItraqEightPlexQuantitationMethod& OpenMS::ItraqEightPlexQuantitationMethod::operator=(const OpenMS::ItraqEightPlexQuantitationMethod&)' 62 | ItraqEightPlexQuantitationMethod & operator=(const ItraqEightPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h:60:38: note: by 'OpenMS::ItraqFourPlexQuantitationMethod& OpenMS::ItraqFourPlexQuantitationMethod::operator=(const OpenMS::ItraqFourPlexQuantitationMethod&)' 60 | ItraqFourPlexQuantitationMethod& operator=(const ItraqFourPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureNode.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp:35: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:53:23: note: by 'OpenMS::PeptideAndProteinQuant& OpenMS::PeptideAndProteinQuant::operator=(const OpenMS::PeptideAndProteinQuant&)' 53 | class OPENMS_DLLAPI PeptideAndProteinQuant : | ^~~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinInference.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:69:23: note: by 'OpenMS::ProteinResolver& OpenMS::ProteinResolver::operator=(const OpenMS::ProteinResolver&)' 69 | ProteinResolver & operator=(const ProteinResolver & rhs); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:53:23: note: by 'OpenMS::PeptideAndProteinQuant& OpenMS::PeptideAndProteinQuant::operator=(const OpenMS::PeptideAndProteinQuant&)' 53 | class OPENMS_DLLAPI PeptideAndProteinQuant : | ^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:69:23: note: by 'OpenMS::ProteinResolver& OpenMS::ProteinResolver::operator=(const OpenMS::ProteinResolver&)' 69 | ProteinResolver & operator=(const ProteinResolver & rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:79:38: note: by 'OpenMS::QuantitativeExperimentalDesign& OpenMS::QuantitativeExperimentalDesign::operator=(const OpenMS::QuantitativeExperimentalDesign&)' 79 | QuantitativeExperimentalDesign & operator=(const QuantitativeExperimentalDesign &); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.h:62:40: note: by 'OpenMS::TMTSixteenPlexQuantitationMethod& OpenMS::TMTSixteenPlexQuantitationMethod::operator=(const OpenMS::TMTSixteenPlexQuantitationMethod&)' 62 | TMTSixteenPlexQuantitationMethod & operator=(const TMTSixteenPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h:62:39: note: by 'OpenMS::TMTElevenPlexQuantitationMethod& OpenMS::TMTElevenPlexQuantitationMethod::operator=(const OpenMS::TMTElevenPlexQuantitationMethod&)' 62 | TMTElevenPlexQuantitationMethod & operator=(const TMTElevenPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTSixPlexQuantitationMethod& OpenMS::TMTSixPlexQuantitationMethod::operator=(const OpenMS::TMTSixPlexQuantitationMethod&)' 62 | TMTSixPlexQuantitationMethod & operator=(const TMTSixPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTTenPlexQuantitationMethod& OpenMS::TMTTenPlexQuantitationMethod::operator=(const OpenMS::TMTTenPlexQuantitationMethod&)' 62 | TMTTenPlexQuantitationMethod & operator=(const TMTTenPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:51: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:84:23: note: by 'OpenMS::AbsoluteQuantitation& OpenMS::AbsoluteQuantitation::operator=(const OpenMS::AbsoluteQuantitation&)' 84 | class OPENMS_DLLAPI AbsoluteQuantitation : | ^~~~~~~~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SimpleSVM.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SimpleSVM.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h:65:23: note: by 'OpenMS::SimpleSVM& OpenMS::SimpleSVM::operator=(const OpenMS::SimpleSVM&)' 65 | class OPENMS_DLLAPI SimpleSVM : | ^~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp: In static member function 'static void OpenMS::SVMWrapper::createRandomPartitions(svm_problem*, OpenMS::Size, std::vector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp:611:21: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 611 | random_shuffle(indices.begin(), indices.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/SVM/SVMWrapper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp:35: /usr/include/c++/14/bits/stl_algo.h:4492:5: note: declared here 4492 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp: In static member function 'static void OpenMS::SVMWrapper::createRandomPartitions(const OpenMS::SVMData&, OpenMS::Size, std::vector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp:679:21: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 679 | random_shuffle(indices.begin(), indices.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_algo.h:4492:5: note: declared here 4492 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h:81:23: note: by 'OpenMS::SimplePairFinder& OpenMS::SimplePairFinder::operator=(const OpenMS::SimplePairFinder&)' 81 | class OPENMS_DLLAPI SimplePairFinder : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:115:25: note: by 'OpenMS::LabeledPairFinder& OpenMS::LabeledPairFinder::operator=(const OpenMS::LabeledPairFinder&)' 115 | LabeledPairFinder & operator=(const LabeledPairFinder & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:109:23: note: by 'OpenMS::StablePairFinder& OpenMS::StablePairFinder::operator=(const OpenMS::StablePairFinder&)' 109 | class OPENMS_DLLAPI StablePairFinder : | ^~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:95:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 95 | public std::iterator | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:173:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 173 | public std::iterator | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:104:23: note: by 'OpenMS::QTClusterFinder& OpenMS::QTClusterFinder::operator=(const OpenMS::QTClusterFinder&)' 104 | class OPENMS_DLLAPI QTClusterFinder : | ^~~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:86:23: note: by 'OpenMS::BaseSuperimposer& OpenMS::BaseSuperimposer::operator=(const OpenMS::BaseSuperimposer&)' 86 | BaseSuperimposer& operator=(const BaseSuperimposer&); | ^~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h:88:39: note: by 'OpenMS::FeatureGroupingAlgorithmLabeled& OpenMS::FeatureGroupingAlgorithmLabeled::operator=(const OpenMS::FeatureGroupingAlgorithmLabeled&)' 88 | FeatureGroupingAlgorithmLabeled & operator=(const FeatureGroupingAlgorithmLabeled &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h:136:41: note: by 'OpenMS::FeatureGroupingAlgorithmUnlabeled& OpenMS::FeatureGroupingAlgorithmUnlabeled::operator=(const OpenMS::FeatureGroupingAlgorithmUnlabeled&)' 136 | FeatureGroupingAlgorithmUnlabeled & operator=(const FeatureGroupingAlgorithmUnlabeled &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:99:33: note: by 'OpenMS::FeatureGroupingAlgorithmQT& OpenMS::FeatureGroupingAlgorithmQT::operator=(const OpenMS::FeatureGroupingAlgorithmQT&)' 99 | FeatureGroupingAlgorithmQT& operator=(const FeatureGroupingAlgorithmQT&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:224:33: note: by 'OpenMS::FeatureGroupingAlgorithmKD& OpenMS::FeatureGroupingAlgorithmKD::operator=(const OpenMS::FeatureGroupingAlgorithmKD&)' 224 | FeatureGroupingAlgorithmKD& operator=(const FeatureGroupingAlgorithmKD&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp: In member function 'void OpenMS::FeatureGroupingAlgorithm::transferSubelements(const std::vector&, OpenMS::ConsensusMap&) const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:93:52: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 93 | out.getColumnHeaders()[counter] = desc_it->second; | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h:88:39: note: by 'OpenMS::FeatureGroupingAlgorithmLabeled& OpenMS::FeatureGroupingAlgorithmLabeled::operator=(const OpenMS::FeatureGroupingAlgorithmLabeled&)' 88 | FeatureGroupingAlgorithmLabeled & operator=(const FeatureGroupingAlgorithmLabeled &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:115:25: note: by 'OpenMS::LabeledPairFinder& OpenMS::LabeledPairFinder::operator=(const OpenMS::LabeledPairFinder&)' 115 | LabeledPairFinder & operator=(const LabeledPairFinder & source); | ^~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:224:33: note: by 'OpenMS::FeatureGroupingAlgorithmKD& OpenMS::FeatureGroupingAlgorithmKD::operator=(const OpenMS::FeatureGroupingAlgorithmKD&)' 224 | FeatureGroupingAlgorithmKD& operator=(const FeatureGroupingAlgorithmKD&); | ^~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:99:33: note: by 'OpenMS::FeatureGroupingAlgorithmQT& OpenMS::FeatureGroupingAlgorithmQT::operator=(const OpenMS::FeatureGroupingAlgorithmQT&)' 99 | FeatureGroupingAlgorithmQT& operator=(const FeatureGroupingAlgorithmQT&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:95:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 95 | public std::iterator | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:173:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 173 | public std::iterator | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:104:23: note: by 'OpenMS::QTClusterFinder& OpenMS::QTClusterFinder::operator=(const OpenMS::QTClusterFinder&)' 104 | class OPENMS_DLLAPI QTClusterFinder : | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h:136:41: note: by 'OpenMS::FeatureGroupingAlgorithmUnlabeled& OpenMS::FeatureGroupingAlgorithmUnlabeled::operator=(const OpenMS::FeatureGroupingAlgorithmUnlabeled&)' 136 | FeatureGroupingAlgorithmUnlabeled & operator=(const FeatureGroupingAlgorithmUnlabeled &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:109:23: note: by 'OpenMS::StablePairFinder& OpenMS::StablePairFinder::operator=(const OpenMS::StablePairFinder&)' 109 | class OPENMS_DLLAPI StablePairFinder : | ^~~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:115:25: note: by 'OpenMS::LabeledPairFinder& OpenMS::LabeledPairFinder::operator=(const OpenMS::LabeledPairFinder&)' 115 | LabeledPairFinder & operator=(const LabeledPairFinder & source); | ^~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:335:42: note: by 'OpenMS::MapAlignmentAlgorithmIdentification& OpenMS::MapAlignmentAlgorithmIdentification::operator=(const OpenMS::MapAlignmentAlgorithmIdentification&)' 335 | MapAlignmentAlgorithmIdentification& operator=(const MapAlignmentAlgorithmIdentification&); | ^~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:109:23: note: by 'OpenMS::StablePairFinder& OpenMS::StablePairFinder::operator=(const OpenMS::StablePairFinder&)' 109 | class OPENMS_DLLAPI StablePairFinder : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:86:23: note: by 'OpenMS::BaseSuperimposer& OpenMS::BaseSuperimposer::operator=(const OpenMS::BaseSuperimposer&)' 86 | BaseSuperimposer& operator=(const BaseSuperimposer&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:66:23: note: by 'OpenMS::PoseClusteringAffineSuperimposer& OpenMS::PoseClusteringAffineSuperimposer::operator=(const OpenMS::PoseClusteringAffineSuperimposer&)' 66 | class OPENMS_DLLAPI PoseClusteringAffineSuperimposer : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:110:42: note: by 'OpenMS::MapAlignmentAlgorithmPoseClustering& OpenMS::MapAlignmentAlgorithmPoseClustering::operator=(const OpenMS::MapAlignmentAlgorithmPoseClustering&)' 110 | MapAlignmentAlgorithmPoseClustering& operator=(const MapAlignmentAlgorithmPoseClustering&); | ^~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_tree.h:65, from /usr/include/c++/14/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/bits/stl_tree.h:63: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:335:42: note: by 'OpenMS::MapAlignmentAlgorithmIdentification& OpenMS::MapAlignmentAlgorithmIdentification::operator=(const OpenMS::MapAlignmentAlgorithmIdentification&)' 335 | MapAlignmentAlgorithmIdentification& operator=(const MapAlignmentAlgorithmIdentification&); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:53: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:431:18: warning: 'virtual void OpenMS::TOPPBase::registerOptionsAndFlags_()' was hidden [-Woverloaded-virtual=] 431 | virtual void registerOptionsAndFlags_() = 0; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:123:8: note: by 'void OpenMS::TOPPMapAlignerBase::registerOptionsAndFlags_(const OpenMS::String&, ReferenceParameterKind)' 123 | void registerOptionsAndFlags_(const String& file_formats, | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:174:38: note: by 'OpenMS::MapAlignmentAlgorithmTreeGuided& OpenMS::MapAlignmentAlgorithmTreeGuided::operator=(const OpenMS::MapAlignmentAlgorithmTreeGuided&)' 174 | MapAlignmentAlgorithmTreeGuided& operator=(const MapAlignmentAlgorithmTreeGuided&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h:72:46: note: by 'OpenMS::MapAlignmentAlgorithmSpectrumAlignment& OpenMS::MapAlignmentAlgorithmSpectrumAlignment::operator=(const OpenMS::MapAlignmentAlgorithmSpectrumAlignment&)' 72 | MapAlignmentAlgorithmSpectrumAlignment & operator=(const MapAlignmentAlgorithmSpectrumAlignment &); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h:37: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h:38: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/refwrap.h:39, from /usr/include/c++/14/vector:68: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:86:23: note: by 'OpenMS::BaseSuperimposer& OpenMS::BaseSuperimposer::operator=(const OpenMS::BaseSuperimposer&)' 86 | BaseSuperimposer& operator=(const BaseSuperimposer&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:66:23: note: by 'OpenMS::PoseClusteringAffineSuperimposer& OpenMS::PoseClusteringAffineSuperimposer::operator=(const OpenMS::PoseClusteringAffineSuperimposer&)' 66 | class OPENMS_DLLAPI PoseClusteringAffineSuperimposer : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:60:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 60 | public std::iterator | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:160:23: note: by 'OpenMS::MorphologicalFilter& OpenMS::MorphologicalFilter::operator=(const OpenMS::MorphologicalFilter&)' 160 | class OPENMS_DLLAPI MorphologicalFilter : | ^~~~~~~~~~~~~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:86:23: note: by 'OpenMS::BaseSuperimposer& OpenMS::BaseSuperimposer::operator=(const OpenMS::BaseSuperimposer&)' 86 | BaseSuperimposer& operator=(const BaseSuperimposer&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.h:64:23: note: by 'OpenMS::PoseClusteringShiftSuperimposer& OpenMS::PoseClusteringShiftSuperimposer::operator=(const OpenMS::PoseClusteringShiftSuperimposer&)' 64 | class OPENMS_DLLAPI PoseClusteringShiftSuperimposer : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:60:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 60 | public std::iterator | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:160:23: note: by 'OpenMS::MorphologicalFilter& OpenMS::MorphologicalFilter::operator=(const OpenMS::MorphologicalFilter&)' 160 | class OPENMS_DLLAPI MorphologicalFilter : | ^~~~~~~~~~~~~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:95:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 95 | public std::iterator | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:173:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 173 | public std::iterator | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:104:23: note: by 'OpenMS::QTClusterFinder& OpenMS::QTClusterFinder::operator=(const OpenMS::QTClusterFinder&)' 104 | class OPENMS_DLLAPI QTClusterFinder : | ^~~~~~~~~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h:81:23: note: by 'OpenMS::SimplePairFinder& OpenMS::SimplePairFinder::operator=(const OpenMS::SimplePairFinder&)' 81 | class OPENMS_DLLAPI SimplePairFinder : | ^~~~~~~~~~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:109:23: note: by 'OpenMS::StablePairFinder& OpenMS::StablePairFinder::operator=(const OpenMS::StablePairFinder&)' 109 | class OPENMS_DLLAPI StablePairFinder : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp: In member function 'OpenMS::TransformationDescription::TransformationStatistics OpenMS::TransformationDescription::getStatistics() const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp:219:31: warning: implicitly-declared 'OpenMS::TransformationDescription::TransformationStatistics::TransformationStatistics(const OpenMS::TransformationDescription::TransformationStatistics&)' is deprecated [-Wdeprecated-copy] 219 | if (data_.empty()) return s; | ^ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:73:33: note: because 'OpenMS::TransformationDescription::TransformationStatistics' has user-provided 'OpenMS::TransformationDescription::TransformationStatistics& OpenMS::TransformationDescription::TransformationStatistics::operator=(const OpenMS::TransformationDescription::TransformationStatistics&)' 73 | TransformationStatistics& operator=(const TransformationStatistics& rhs) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp:260:12: warning: implicitly-declared 'OpenMS::TransformationDescription::TransformationStatistics::TransformationStatistics(const OpenMS::TransformationDescription::TransformationStatistics&)' is deprecated [-Wdeprecated-copy] 260 | return s; | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:73:33: note: because 'OpenMS::TransformationDescription::TransformationStatistics' has user-provided 'OpenMS::TransformationDescription::TransformationStatistics& OpenMS::TransformationDescription::TransformationStatistics::operator=(const OpenMS::TransformationDescription::TransformationStatistics&)' 73 | TransformationStatistics& operator=(const TransformationStatistics& rhs) | ^~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:82:27: note: by 'OpenMS::FeatureDeconvolution& OpenMS::FeatureDeconvolution::operator=(const OpenMS::FeatureDeconvolution&)' 82 | FeatureDeconvolution& operator=(const FeatureDeconvolution& source); | ^~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h:82:37: note: by 'OpenMS::MetaboliteFeatureDeconvolution& OpenMS::MetaboliteFeatureDeconvolution::operator=(const OpenMS::MetaboliteFeatureDeconvolution&)' 82 | MetaboliteFeatureDeconvolution& operator=(const MetaboliteFeatureDeconvolution& source); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/ILPDCWrapper.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp:34: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:258:23: note: by 'OpenMS::AccurateMassSearchEngine& OpenMS::AccurateMassSearchEngine::operator=(const OpenMS::AccurateMassSearchEngine&)' 258 | class OPENMS_DLLAPI AccurateMassSearchEngine : | ^~~~~~~~~~~~~~~~~~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h: In instantiation of 'bool seqan::_spawnConsumeChar(const Pattern >&, PatternAuxData&, Spawn&, AAcid) [with TNeedle = StringSet, Alloc<> > >; AAcid = SimpleType]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:913:33: required from 'bool seqan::find(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' 913 | if (!_spawnConsumeChar(me, dh, *it, c)) // might create new spawns | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:1039:27: required from here 1039 | return ::seqan::find(finder_, pattern, dh_); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:773:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 773 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:793:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 793 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AScore.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:70:23: note: by 'OpenMS::AScore& OpenMS::AScore::operator=(const OpenMS::AScore&)' 70 | class OPENMS_DLLAPI AScore: public DefaultParamHandler | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AScore.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AScore.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h:36, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h:58:23: note: by 'OpenMS::BasicProteinInferenceAlgorithm::operator=' 58 | class OPENMS_DLLAPI BasicProteinInferenceAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:485:68: required from here 485 | IDFilter::FilterPeptideEvidences(*this,peptides); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:726:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 726 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/14/bits/stl_function.h:1043:5: note: declared here 1043 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' 830 | keepMatchingItems(id_it->getHits(), score_filter); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1116:24: required from here 1116 | filterHitsByScore(experiment.getProteinIdentifications(), | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1117 | protein_threshold_score); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/14/bits/stl_function.h:1043:5: note: declared here 1043 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' 830 | keepMatchingItems(id_it->getHits(), score_filter); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1125:26: required from here 1125 | filterHitsByScore(exp_it->getPeptideIdentifications(), | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1126 | peptide_threshold_score); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/14/bits/stl_function.h:1043:5: note: declared here 1043 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:571:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' 571 | keepMatchingItems(item.getHits(), pred); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1184:30: required from here 1184 | keepMatchingItemsUnroll(pep_ids, best_per_peptide); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/14/bits/stl_function.h:1043:5: note: declared here 1043 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' 965 | keepMatchingItems(id_it.getHits(), acc_filter); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1332:31: required from here 1332 | keepHitsMatchingProteins(experiment.getProteinIdentifications(), | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1333 | accessions); | ~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/14/bits/stl_function.h:1043:5: note: declared here 1043 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' 965 | keepMatchingItems(id_it.getHits(), acc_filter); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1342:35: required from here 1342 | keepHitsMatchingProteins(exp_it->getPeptideIdentifications(), | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1343 | accessions); | ~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/14/bits/stl_function.h:1043:5: note: declared here 1043 | not1(const _Predicate& __pred) | ^~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h:38: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h:75:23: note: by 'OpenMS::BayesianProteinInferenceAlgorithm& OpenMS::BayesianProteinInferenceAlgorithm::operator=(const OpenMS::BayesianProteinInferenceAlgorithm&)' 75 | class OPENMS_DLLAPI BayesianProteinInferenceAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MessagePasserFactory.h:110:32: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 110 | MessagePasserFactory