I: pbuilder: network access will be disabled during build I: Current time: Sun Mar 9 10:52:33 -12 2025 I: pbuilder-time-stamp: 1741560753 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [racon_1.5.0-3.dsc] I: copying [./racon_1.5.0.orig.tar.gz] I: copying [./racon_1.5.0-3.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./racon_1.5.0-3.dsc: unsupported subcommand dpkg-source: info: extracting racon in racon-1.5.0 dpkg-source: info: unpacking racon_1.5.0.orig.tar.gz dpkg-source: info: unpacking racon_1.5.0-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_libs.patch dpkg-source: info: applying remove_buildpath dpkg-source: info: applying py3 I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/60897/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='d4c3afcc813e418ca76f9dfa634447ba' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='60897' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.kDljIzU2/pbuilderrc_0poa --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.kDljIzU2/b1 --logfile b1/build.log racon_1.5.0-3.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos12-i386 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/60897/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, libgtest-dev, libbioparser-dev, libcereal-dev, libedlib-dev (>= 1.2.7-3~), libspoa-dev, libthread-pool-dev (>= 3.0.2), rampler dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19787 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libgtest-dev; however: Package libgtest-dev is not installed. pbuilder-satisfydepends-dummy depends on libbioparser-dev; however: Package libbioparser-dev is not installed. pbuilder-satisfydepends-dummy depends on libcereal-dev; however: Package libcereal-dev is not installed. pbuilder-satisfydepends-dummy depends on libedlib-dev (>= 1.2.7-3~); however: Package libedlib-dev is not installed. pbuilder-satisfydepends-dummy depends on libspoa-dev; however: Package libspoa-dev is not installed. pbuilder-satisfydepends-dummy depends on libthread-pool-dev (>= 3.0.2); however: Package libthread-pool-dev is not installed. pbuilder-satisfydepends-dummy depends on rampler; however: Package rampler is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} googletest{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libbioparser-dev{a} libbiosoup-dev{a} libbrotli1{a} libcereal-dev{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libedlib-dev{a} libedlib1{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgnutls30t64{a} libgssapi-krb5-2{a} libgtest-dev{a} libicu72{a} libidn2-0{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap2{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnghttp3-9{a} libp11-kit0{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libspoa-dev{a} libspoa7.0.0{a} libssh2-1t64{a} libtasn1-6{a} libthread-pool-dev{a} libtool{a} libuchardet0{a} libunistring5{a} libuv1t64{a} libxml2{a} m4{a} man-db{a} po-debconf{a} procps{a} rampler{a} rapidjson-dev{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix wget 0 packages upgraded, 73 newly installed, 0 to remove and 0 not upgraded. Need to get 44.6 MB of archives. After unpacking 161 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 libproc2-0 i386 2:4.0.4-7 [66.0 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 procps i386 2:4.0.4-7 [876 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.23.1-1 [245 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-7 [1199 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40.4-5 [96.5 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-7 [301 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 autoconf all 2.72-3 [493 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 automake all 1:1.17-3 [862 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 autopoint all 0.23.1-1 [770 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 cmake-data all 3.31.6-1 [2268 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-6 [9582 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b2 [734 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 libarchive13t64 i386 3.7.4-1.1 [390 kB] Get: 22 http://deb.debian.org/debian trixie/main i386 libbrotli1 i386 1.1.0-2+b7 [299 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 libkrb5support0 i386 1.21.3-4 [35.0 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 libcom-err2 i386 1.47.2-1 [24.3 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 libk5crypto3 i386 1.21.3-4 [83.7 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 libkeyutils1 i386 1.6.3-4 [9600 B] Get: 27 http://deb.debian.org/debian trixie/main i386 libkrb5-3 i386 1.21.3-4 [354 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 libgssapi-krb5-2 i386 1.21.3-4 [149 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 libunistring5 i386 1.3-1 [458 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 libidn2-0 i386 2.3.7-2+b1 [130 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-9 [20.8 kB] Get: 32 http://deb.debian.org/debian trixie/main i386 libsasl2-2 i386 2.1.28+dfsg1-9 [61.2 kB] Get: 33 http://deb.debian.org/debian trixie/main i386 libldap2 i386 2.6.9+dfsg-1 [205 kB] Get: 34 http://deb.debian.org/debian trixie/main i386 libnghttp2-14 i386 1.64.0-1 [82.4 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 libnghttp3-9 i386 1.8.0-1 [78.7 kB] Get: 36 http://deb.debian.org/debian trixie/main i386 libpsl5t64 i386 0.21.2-1.1+b1 [57.7 kB] Get: 37 http://deb.debian.org/debian trixie/main i386 libffi8 i386 3.4.7-1 [21.4 kB] Get: 38 http://deb.debian.org/debian trixie/main i386 libp11-kit0 i386 0.25.5-3 [423 kB] Get: 39 http://deb.debian.org/debian trixie/main i386 libtasn1-6 i386 4.20.0-2 [51.6 kB] Get: 40 http://deb.debian.org/debian trixie/main i386 libgnutls30t64 i386 3.8.9-2 [1462 kB] Get: 41 http://deb.debian.org/debian trixie/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b5 [62.4 kB] Get: 42 http://deb.debian.org/debian trixie/main i386 libssh2-1t64 i386 1.11.1-1 [256 kB] Get: 43 http://deb.debian.org/debian trixie/main i386 libcurl4t64 i386 8.12.1-3 [415 kB] Get: 44 http://deb.debian.org/debian trixie/main i386 libexpat1 i386 2.6.4-1 [107 kB] Get: 45 http://deb.debian.org/debian trixie/main i386 libjsoncpp26 i386 1.9.6-3 [90.0 kB] Get: 46 http://deb.debian.org/debian trixie/main i386 librhash1 i386 1.4.5-1 [144 kB] Get: 47 http://deb.debian.org/debian trixie/main i386 libuv1t64 i386 1.50.0-2 [163 kB] Get: 48 http://deb.debian.org/debian trixie/main i386 cmake i386 3.31.6-1 [13.1 MB] Get: 49 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.24.1 [90.9 kB] Get: 50 http://deb.debian.org/debian trixie/main i386 libtool all 2.5.4-3 [539 kB] Get: 51 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 52 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 53 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 54 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 55 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 56 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 57 http://deb.debian.org/debian trixie/main i386 gettext i386 0.23.1-1 [1714 kB] Get: 58 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 59 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 60 http://deb.debian.org/debian trixie/main i386 debhelper all 13.24.1 [920 kB] Get: 61 http://deb.debian.org/debian trixie/main i386 googletest all 1.16.0-1 [517 kB] Get: 62 http://deb.debian.org/debian trixie/main i386 libbiosoup-dev all 0.11.0-2 [8000 B] Get: 63 http://deb.debian.org/debian trixie/main i386 zlib1g-dev i386 1:1.3.dfsg+really1.3.1-1+b1 [916 kB] Get: 64 http://deb.debian.org/debian trixie/main i386 libbioparser-dev all 3.1.0-1 [9108 B] Get: 65 http://deb.debian.org/debian trixie/main i386 rapidjson-dev all 1.1.0+dfsg2-7.3 [98.0 kB] Get: 66 http://deb.debian.org/debian trixie/main i386 libcereal-dev i386 1.3.2+dfsg-5 [221 kB] Get: 67 http://deb.debian.org/debian trixie/main i386 libedlib1 i386 1.2.7-6+b3 [17.9 kB] Get: 68 http://deb.debian.org/debian trixie/main i386 libedlib-dev i386 1.2.7-6+b3 [22.9 kB] Get: 69 http://deb.debian.org/debian trixie/main i386 libgtest-dev i386 1.16.0-1 [274 kB] Get: 70 http://deb.debian.org/debian trixie/main i386 libspoa7.0.0 i386 4.1.4-2+b1 [92.7 kB] Get: 71 http://deb.debian.org/debian trixie/main i386 libspoa-dev i386 4.1.4-2+b1 [9800 B] Get: 72 http://deb.debian.org/debian trixie/main i386 libthread-pool-dev i386 4.0.0-2 [7296 B] Get: 73 http://deb.debian.org/debian trixie/main i386 rampler i386 2.1.1-1 [22.5 kB] Fetched 44.6 MB in 1s (41.3 MB/s) Preconfiguring packages ... Selecting previously unselected package libproc2-0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19787 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.4-7_i386.deb ... Unpacking libproc2-0:i386 (2:4.0.4-7) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.4-7_i386.deb ... Unpacking procps (2:4.0.4-7) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../04-libmagic1t64_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic1t64:i386 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.45-3+b1_i386.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.23.1-1_i386.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../07-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.23.0-7_i386.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../09-bsdextrautils_2.40.4-5_i386.deb ... Unpacking bsdextrautils (2.40.4-5) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../10-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../11-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.19-7_i386.deb ... Unpacking m4 (1.4.19-7) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../15-automake_1%3a1.17-3_all.deb ... Unpacking automake (1:1.17-3) ... Selecting previously unselected package autopoint. Preparing to unpack .../16-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package cmake-data. Preparing to unpack .../17-cmake-data_3.31.6-1_all.deb ... Unpacking cmake-data (3.31.6-1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../18-libicu72_72.1-6_i386.deb ... Unpacking libicu72:i386 (72.1-6) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../19-libxml2_2.12.7+dfsg+really2.9.14-0.2+b2_i386.deb ... Unpacking libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b2) ... Selecting previously unselected package libarchive13t64:i386. Preparing to unpack .../20-libarchive13t64_3.7.4-1.1_i386.deb ... Unpacking libarchive13t64:i386 (3.7.4-1.1) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../21-libbrotli1_1.1.0-2+b7_i386.deb ... Unpacking libbrotli1:i386 (1.1.0-2+b7) ... Selecting previously unselected package libkrb5support0:i386. Preparing to unpack .../22-libkrb5support0_1.21.3-4_i386.deb ... Unpacking libkrb5support0:i386 (1.21.3-4) ... Selecting previously unselected package libcom-err2:i386. Preparing to unpack .../23-libcom-err2_1.47.2-1_i386.deb ... Unpacking libcom-err2:i386 (1.47.2-1) ... Selecting previously unselected package libk5crypto3:i386. Preparing to unpack .../24-libk5crypto3_1.21.3-4_i386.deb ... Unpacking libk5crypto3:i386 (1.21.3-4) ... Selecting previously unselected package libkeyutils1:i386. Preparing to unpack .../25-libkeyutils1_1.6.3-4_i386.deb ... Unpacking libkeyutils1:i386 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:i386. Preparing to unpack .../26-libkrb5-3_1.21.3-4_i386.deb ... Unpacking libkrb5-3:i386 (1.21.3-4) ... Selecting previously unselected package libgssapi-krb5-2:i386. Preparing to unpack .../27-libgssapi-krb5-2_1.21.3-4_i386.deb ... Unpacking libgssapi-krb5-2:i386 (1.21.3-4) ... Selecting previously unselected package libunistring5:i386. Preparing to unpack .../28-libunistring5_1.3-1_i386.deb ... Unpacking libunistring5:i386 (1.3-1) ... Selecting previously unselected package libidn2-0:i386. Preparing to unpack .../29-libidn2-0_2.3.7-2+b1_i386.deb ... Unpacking libidn2-0:i386 (2.3.7-2+b1) ... Selecting previously unselected package libsasl2-modules-db:i386. Preparing to unpack .../30-libsasl2-modules-db_2.1.28+dfsg1-9_i386.deb ... Unpacking libsasl2-modules-db:i386 (2.1.28+dfsg1-9) ... Selecting previously unselected package libsasl2-2:i386. Preparing to unpack .../31-libsasl2-2_2.1.28+dfsg1-9_i386.deb ... Unpacking libsasl2-2:i386 (2.1.28+dfsg1-9) ... Selecting previously unselected package libldap2:i386. Preparing to unpack .../32-libldap2_2.6.9+dfsg-1_i386.deb ... 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Processing triggers for libc-bin (2.40-7) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/racon-1.5.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../racon_1.5.0-3_source.changes dpkg-buildpackage: info: source package racon dpkg-buildpackage: info: source version 1.5.0-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --buildsystem=cmake dh_auto_clean -O--buildsystem=cmake dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules binary dh binary --buildsystem=cmake dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/racon-1.5.0' dh_auto_configure -- -Dracon_build_tests=ON -Dracon_build_wrapper=ON cd obj-i686-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu -Dracon_build_tests=ON -Dracon_build_wrapper=ON .. -- The CXX compiler identification is GNU 14.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done (0.7s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY -- Build files have been written to: /build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu # Somehow the means in the patch for CMakeLists.txt to replace -lpthread by -pthread to not work # Just hack it here sed -i 's/-lpthread/-pthread/' obj-*/CMakeFiles/racon_test.dir/link.txt make[1]: Leaving directory '/build/reproducible-path/racon-1.5.0' dh_auto_build -O--buildsystem=cmake cd obj-i686-linux-gnu && make -j11 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/racon-1.5.0 -B/build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start 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directory '/build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu' [ 10%] Building CXX object CMakeFiles/racon.dir/src/overlap.cpp.o [ 20%] Building CXX object CMakeFiles/racon.dir/src/sequence.cpp.o /usr/bin/c++ -I/build/reproducible-path/racon-1.5.0/src -g -O2 -ffile-prefix-map=/build/reproducible-path/racon-1.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++11 -pthread -MD -MT CMakeFiles/racon.dir/src/overlap.cpp.o -MF CMakeFiles/racon.dir/src/overlap.cpp.o.d -o CMakeFiles/racon.dir/src/overlap.cpp.o -c /build/reproducible-path/racon-1.5.0/src/overlap.cpp /usr/bin/c++ -I/build/reproducible-path/racon-1.5.0/src -g -O2 -ffile-prefix-map=/build/reproducible-path/racon-1.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++11 -pthread -MD -MT CMakeFiles/racon.dir/src/sequence.cpp.o -MF CMakeFiles/racon.dir/src/sequence.cpp.o.d -o CMakeFiles/racon.dir/src/sequence.cpp.o -c /build/reproducible-path/racon-1.5.0/src/sequence.cpp [ 30%] Building CXX object CMakeFiles/racon.dir/src/logger.cpp.o [ 50%] Building CXX object CMakeFiles/racon.dir/src/polisher.cpp.o [ 50%] Building CXX object CMakeFiles/racon.dir/src/window.cpp.o /usr/bin/c++ -I/build/reproducible-path/racon-1.5.0/src -g -O2 -ffile-prefix-map=/build/reproducible-path/racon-1.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++11 -pthread -MD -MT CMakeFiles/racon.dir/src/logger.cpp.o -MF CMakeFiles/racon.dir/src/logger.cpp.o.d -o CMakeFiles/racon.dir/src/logger.cpp.o -c /build/reproducible-path/racon-1.5.0/src/logger.cpp /usr/bin/c++ -I/build/reproducible-path/racon-1.5.0/src -g -O2 -ffile-prefix-map=/build/reproducible-path/racon-1.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++11 -pthread -MD -MT CMakeFiles/racon.dir/src/polisher.cpp.o -MF CMakeFiles/racon.dir/src/polisher.cpp.o.d -o CMakeFiles/racon.dir/src/polisher.cpp.o -c /build/reproducible-path/racon-1.5.0/src/polisher.cpp /usr/bin/c++ -I/build/reproducible-path/racon-1.5.0/src -g -O2 -ffile-prefix-map=/build/reproducible-path/racon-1.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++11 -pthread -MD -MT CMakeFiles/racon.dir/src/window.cpp.o -MF CMakeFiles/racon.dir/src/window.cpp.o.d -o CMakeFiles/racon.dir/src/window.cpp.o -c /build/reproducible-path/racon-1.5.0/src/window.cpp /build/reproducible-path/racon-1.5.0/src/overlap.cpp: In member function 'virtual void racon::Overlap::align_overlaps(const char*, uint32_t, const char*, uint32_t)': /build/reproducible-path/racon-1.5.0/src/overlap.cpp:219:48: warning: format '%zu' expects argument of type 'size_t', but argument 3 has type 'uint64_t' {aka 'long long unsigned int'} [-Wformat=] 219 | "edlib unable to align pair (%zu x %zu)!\n", q_id_, t_id_); | ~~^ ~~~~~ | | | | unsigned int uint64_t {aka long long unsigned int} | %llu /build/reproducible-path/racon-1.5.0/src/overlap.cpp:219:54: warning: format '%zu' expects argument of type 'size_t', but argument 4 has type 'uint64_t' {aka 'long long unsigned int'} [-Wformat=] 219 | "edlib unable to align pair (%zu x %zu)!\n", q_id_, t_id_); | ~~^ ~~~~~ | | | | unsigned int uint64_t {aka long long unsigned int} | %llu /build/reproducible-path/racon-1.5.0/src/window.cpp: In member function 'bool racon::Window::generate_consensus(std::shared_ptr, bool)': /build/reproducible-path/racon-1.5.0/src/window.cpp:142:27: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'uint64_t' {aka 'long long unsigned int'} [-Wformat=] 142 | "contig %lu might be chimeric in window %u!\n", id_, rank_); | ~~^ ~~~ | | | | long unsigned int uint64_t {aka long long unsigned int} | %llu [ 60%] Linking CXX static library lib/libracon.a /usr/bin/cmake -P CMakeFiles/racon.dir/cmake_clean_target.cmake /usr/bin/cmake -E cmake_link_script CMakeFiles/racon.dir/link.txt --verbose=1 /usr/bin/ar qc lib/libracon.a CMakeFiles/racon.dir/src/logger.cpp.o CMakeFiles/racon.dir/src/polisher.cpp.o CMakeFiles/racon.dir/src/overlap.cpp.o CMakeFiles/racon.dir/src/sequence.cpp.o CMakeFiles/racon.dir/src/window.cpp.o /usr/bin/ranlib lib/libracon.a make[3]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu' [ 60%] Built target racon make -f CMakeFiles/racon_exe.dir/build.make CMakeFiles/racon_exe.dir/depend make -f CMakeFiles/racon_test.dir/build.make CMakeFiles/racon_test.dir/depend make[3]: Entering directory '/build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu' cd /build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/racon-1.5.0 /build/reproducible-path/racon-1.5.0 /build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu /build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu /build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu/CMakeFiles/racon_test.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/racon-1.5.0 /build/reproducible-path/racon-1.5.0 /build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu /build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu /build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu/CMakeFiles/racon_exe.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu' make -f CMakeFiles/racon_exe.dir/build.make CMakeFiles/racon_exe.dir/build make[3]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu' make 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-ffile-prefix-map=/build/reproducible-path/racon-1.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/racon_test.dir/test/racon_test.cpp.o -MF CMakeFiles/racon_test.dir/test/racon_test.cpp.o.d -o CMakeFiles/racon_test.dir/test/racon_test.cpp.o -c /build/reproducible-path/racon-1.5.0/test/racon_test.cpp [ 90%] Linking CXX executable bin/racon /usr/bin/cmake -E cmake_link_script CMakeFiles/racon_exe.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/racon-1.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/racon_exe.dir/link.d CMakeFiles/racon_exe.dir/src/main.cpp.o -o bin/racon lib/libracon.a -ledlib -lspoa -lpthread -lz make[3]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu' [ 90%] Built target racon_exe [100%] Linking CXX executable bin/racon_test /usr/bin/cmake -E cmake_link_script CMakeFiles/racon_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/racon-1.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/racon_test.dir/link.d CMakeFiles/racon_test.dir/test/racon_test.cpp.o -o bin/racon_test lib/libracon.a -ledlib -lspoa -pthread -lz /usr/lib/i386-linux-gnu/libgtest_main.a /usr/lib/i386-linux-gnu/libgtest.a make[3]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu' [100%] Built target racon_test make[2]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/racon-1.5.0' cd test && ../obj-*/bin/racon_test Running main() from ./googletest/src/gtest_main.cc [==========] Running 15 tests from 2 test suites. [----------] Global test environment set-up. [----------] 5 tests from RaconInitializeTest [ RUN ] RaconInitializeTest.PolisherTypeError [ OK ] RaconInitializeTest.PolisherTypeError (1 ms) [ RUN ] RaconInitializeTest.WindowLengthError [ OK ] RaconInitializeTest.WindowLengthError (1 ms) [ RUN ] RaconInitializeTest.SequencesPathExtensionError [ OK ] RaconInitializeTest.SequencesPathExtensionError (1 ms) [ RUN ] RaconInitializeTest.OverlapsPathExtensionError [ OK ] RaconInitializeTest.OverlapsPathExtensionError (12 ms) [ RUN ] RaconInitializeTest.TargetPathExtensionError [ OK ] RaconInitializeTest.TargetPathExtensionError (12 ms) [----------] 5 tests from RaconInitializeTest (28 ms total) [----------] 10 tests from RaconPolishingTest [ RUN ] RaconPolishingTest.ConsensusWithQualities [racon::Polisher::initialize] loaded target sequences 0.000843 s [racon::Polisher::initialize] loaded sequences 0.055145 s [racon::Polisher::initialize] loaded overlaps 0.000487 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.068091 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.106534 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.155531 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.190455 s [racon::Polisher::initialize] aligning overlaps [=====> ] 0.237345 s [racon::Polisher::initialize] aligning overlaps [======> ] 0.278116 s [racon::Polisher::initialize] aligning overlaps [=======> ] 0.381135 s [racon::Polisher::initialize] aligning overlaps [========> ] 0.433778 s [racon::Polisher::initialize] aligning overlaps [=========> ] 0.474501 s [racon::Polisher::initialize] aligning overlaps [==========> ] 0.510335 s [racon::Polisher::initialize] aligning overlaps [===========> ] 0.559385 s [racon::Polisher::initialize] aligning overlaps [============> ] 0.601144 s [racon::Polisher::initialize] aligning overlaps [=============> ] 0.646037 s [racon::Polisher::initialize] aligning overlaps [==============> ] 0.667834 s [racon::Polisher::initialize] aligning overlaps [===============> ] 0.695369 s [racon::Polisher::initialize] aligning overlaps [================> ] 0.736357 s [racon::Polisher::initialize] aligning overlaps [=================> ] 0.761980 s [racon::Polisher::initialize] aligning overlaps [==================> ] 0.796879 s [racon::Polisher::initialize] aligning overlaps [===================>] 0.861569 s [racon::Polisher::initialize] aligning overlaps [====================] 0.919290 s [racon::Polisher::initialize] transformed data into windows 0.067042 s [racon::Polisher::polish] generating consensus [=> ] 0.904131 s [racon::Polisher::polish] generating consensus [==> ] 1.752105 s [racon::Polisher::polish] generating consensus [===> ] 2.445110 s [racon::Polisher::polish] generating consensus [====> ] 2.967680 s [racon::Polisher::polish] generating consensus [=====> ] 3.217839 s [racon::Polisher::polish] generating consensus [======> ] 3.554730 s [racon::Polisher::polish] generating consensus [=======> ] 3.871634 s [racon::Polisher::polish] generating consensus [========> ] 4.226331 s [racon::Polisher::polish] generating consensus [=========> ] 4.724312 s [racon::Polisher::polish] generating consensus [==========> ] 5.408352 s [racon::Polisher::polish] generating consensus [===========> ] 6.406075 s [racon::Polisher::polish] generating consensus [============> ] 7.628238 s [racon::Polisher::polish] generating consensus [=============> ] 9.376744 s [racon::Polisher::polish] generating consensus [==============> ] 11.156553 s [racon::Polisher::polish] generating consensus [===============> ] 12.329797 s [racon::Polisher::polish] generating consensus [================> ] 13.188848 s [racon::Polisher::polish] generating consensus [=================> ] 15.033794 s [racon::Polisher::polish] generating consensus [==================> ] 15.723969 s [racon::Polisher::polish] generating consensus [===================>] 16.408664 s [racon::Polisher::polish] generating consensus [====================] 18.887741 s [racon::Polisher::] total = 19.982170 s [ OK ] RaconPolishingTest.ConsensusWithQualities (20011 ms) [ RUN ] RaconPolishingTest.ConsensusWithoutQualities [racon::Polisher::initialize] loaded target sequences 0.000983 s [racon::Polisher::initialize] loaded sequences 0.022927 s [racon::Polisher::initialize] loaded overlaps 0.000582 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.072413 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.114350 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.155218 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.194334 s [racon::Polisher::initialize] aligning overlaps [=====> ] 0.237237 s [racon::Polisher::initialize] aligning overlaps [======> ] 0.277946 s [racon::Polisher::initialize] aligning overlaps [=======> ] 0.378734 s [racon::Polisher::initialize] aligning overlaps [========> ] 0.428530 s [racon::Polisher::initialize] aligning overlaps [=========> ] 0.468255 s [racon::Polisher::initialize] aligning overlaps [==========> ] 0.503878 s [racon::Polisher::initialize] aligning overlaps [===========> ] 0.552435 s [racon::Polisher::initialize] aligning overlaps [============> ] 0.594170 s [racon::Polisher::initialize] aligning overlaps [=============> ] 0.640361 s [racon::Polisher::initialize] aligning overlaps [==============> ] 0.661965 s [racon::Polisher::initialize] aligning overlaps [===============> ] 0.714081 s [racon::Polisher::initialize] aligning overlaps [================> ] 0.820234 s [racon::Polisher::initialize] aligning overlaps [=================> ] 0.846633 s [racon::Polisher::initialize] aligning overlaps [==================> ] 0.885350 s [racon::Polisher::initialize] aligning overlaps [===================>] 0.935942 s [racon::Polisher::initialize] aligning overlaps [====================] 0.958313 s [racon::Polisher::initialize] transformed data into windows 0.000998 s [racon::Polisher::polish] generating consensus [=> ] 0.985600 s [racon::Polisher::polish] generating consensus [==> ] 2.138693 s [racon::Polisher::polish] generating consensus [===> ] 2.911589 s [racon::Polisher::polish] generating consensus [====> ] 3.558545 s [racon::Polisher::polish] generating consensus [=====> ] 3.997913 s [racon::Polisher::polish] generating consensus [======> ] 4.390467 s [racon::Polisher::polish] generating consensus [=======> ] 4.842721 s [racon::Polisher::polish] generating consensus [========> ] 5.312045 s [racon::Polisher::polish] generating consensus [=========> ] 6.056499 s [racon::Polisher::polish] generating consensus [==========> ] 7.228469 s [racon::Polisher::polish] generating consensus [===========> ] 8.447486 s [racon::Polisher::polish] generating consensus [============> ] 9.889190 s [racon::Polisher::polish] generating consensus [=============> ] 12.044702 s [racon::Polisher::polish] generating consensus [==============> ] 15.588954 s [racon::Polisher::polish] generating consensus [===============> ] 17.178605 s [racon::Polisher::polish] generating consensus [================> ] 18.729222 s [racon::Polisher::polish] generating consensus [=================> ] 20.097050 s [racon::Polisher::polish] generating consensus [==================> ] 20.857395 s [racon::Polisher::polish] generating consensus [===================>] 22.003269 s [racon::Polisher::polish] generating consensus [====================] 25.849628 s [racon::Polisher::] total = 26.882601 s [ OK ] RaconPolishingTest.ConsensusWithoutQualities (26911 ms) [ RUN ] RaconPolishingTest.ConsensusWithQualitiesAndAlignments [racon::Polisher::initialize] loaded target sequences 0.000850 s [racon::Polisher::initialize] loaded sequences 0.051215 s [racon::Polisher::initialize] loaded overlaps 0.029590 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.003719 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.003931 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.004129 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.004466 s [racon::Polisher::initialize] aligning overlaps [=====> ] 0.004668 s [racon::Polisher::initialize] aligning overlaps [======> ] 0.004883 s [racon::Polisher::initialize] aligning overlaps [=======> ] 0.005084 s [racon::Polisher::initialize] aligning overlaps [========> ] 0.005289 s [racon::Polisher::initialize] aligning overlaps [=========> ] 0.005486 s [racon::Polisher::initialize] aligning overlaps [==========> ] 0.005723 s [racon::Polisher::initialize] aligning overlaps [===========> ] 0.005947 s [racon::Polisher::initialize] aligning overlaps [============> ] 0.006144 s [racon::Polisher::initialize] aligning overlaps [=============> ] 0.006536 s [racon::Polisher::initialize] aligning overlaps [==============> ] 0.006735 s [racon::Polisher::initialize] aligning overlaps [===============> ] 0.006937 s [racon::Polisher::initialize] aligning overlaps [================> ] 0.007189 s [racon::Polisher::initialize] aligning overlaps [=================> ] 0.007427 s [racon::Polisher::initialize] aligning overlaps [==================> ] 0.007681 s [racon::Polisher::initialize] aligning overlaps [===================>] 0.007921 s [racon::Polisher::initialize] aligning overlaps [====================] 0.008150 s [racon::Polisher::initialize] transformed data into windows 0.062052 s [racon::Polisher::polish] generating consensus [=> ] 0.924648 s [racon::Polisher::polish] generating consensus [==> ] 1.790252 s [racon::Polisher::polish] generating consensus [===> ] 2.450968 s [racon::Polisher::polish] generating consensus [====> ] 3.007743 s [racon::Polisher::polish] generating consensus [=====> ] 3.251833 s [racon::Polisher::polish] generating consensus [======> ] 3.575508 s [racon::Polisher::polish] generating consensus [=======> ] 3.876467 s [racon::Polisher::polish] generating consensus [========> ] 4.284108 s [racon::Polisher::polish] generating consensus [=========> ] 4.741152 s [racon::Polisher::polish] generating consensus [==========> ] 5.364905 s [racon::Polisher::polish] generating consensus [===========> ] 6.347259 s [racon::Polisher::polish] generating consensus [============> ] 7.535671 s [racon::Polisher::polish] generating consensus [=============> ] 9.228756 s [racon::Polisher::polish] generating consensus [==============> ] 11.025258 s [racon::Polisher::polish] generating consensus [===============> ] 12.203935 s [racon::Polisher::polish] generating consensus [================> ] 13.079994 s [racon::Polisher::polish] generating consensus [=================> ] 14.231936 s [racon::Polisher::polish] generating consensus [==================> ] 14.844133 s [racon::Polisher::polish] generating consensus [===================>] 15.416372 s [racon::Polisher::polish] generating consensus [====================] 18.494445 s [racon::Polisher::] total = 18.697065 s [ OK ] RaconPolishingTest.ConsensusWithQualitiesAndAlignments (18728 ms) [ RUN ] RaconPolishingTest.ConsensusWithoutQualitiesAndWithAlignments [racon::Polisher::initialize] loaded target sequences 0.000839 s [racon::Polisher::initialize] loaded sequences 0.022952 s [racon::Polisher::initialize] loaded overlaps 0.029940 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.002890 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.003100 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.003344 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.003609 s [racon::Polisher::initialize] aligning overlaps [=====> ] 0.003800 s [racon::Polisher::initialize] aligning overlaps [======> ] 0.003985 s [racon::Polisher::initialize] aligning overlaps [=======> ] 0.004167 s [racon::Polisher::initialize] aligning overlaps [========> ] 0.004363 s [racon::Polisher::initialize] aligning overlaps [=========> ] 0.004543 s [racon::Polisher::initialize] aligning overlaps [==========> ] 0.004726 s [racon::Polisher::initialize] aligning overlaps [===========> ] 0.004904 s [racon::Polisher::initialize] aligning overlaps [============> ] 0.005086 s [racon::Polisher::initialize] aligning overlaps [=============> ] 0.005440 s [racon::Polisher::initialize] aligning overlaps [==============> ] 0.005647 s [racon::Polisher::initialize] aligning overlaps [===============> ] 0.005864 s [racon::Polisher::initialize] aligning overlaps [================> ] 0.006052 s [racon::Polisher::initialize] aligning overlaps [=================> ] 0.006260 s [racon::Polisher::initialize] aligning overlaps [==================> ] 0.006446 s [racon::Polisher::initialize] aligning overlaps [===================>] 0.006731 s [racon::Polisher::initialize] aligning overlaps [====================] 0.006922 s [racon::Polisher::initialize] transformed data into windows 0.000951 s [racon::Polisher::polish] generating consensus [=> ] 0.901751 s [racon::Polisher::polish] generating consensus [==> ] 1.916491 s [racon::Polisher::polish] generating consensus [===> ] 2.755855 s [racon::Polisher::polish] generating consensus [====> ] 3.361068 s [racon::Polisher::polish] generating consensus [=====> ] 3.696766 s [racon::Polisher::polish] generating consensus [======> ] 4.361664 s [racon::Polisher::polish] generating consensus [=======> ] 4.764707 s [racon::Polisher::polish] generating consensus [========> ] 5.343855 s [racon::Polisher::polish] generating consensus [=========> ] 5.923853 s [racon::Polisher::polish] generating consensus [==========> ] 6.810930 s [racon::Polisher::polish] generating consensus [===========> ] 7.965883 s [racon::Polisher::polish] generating consensus [============> ] 9.388091 s [racon::Polisher::polish] generating consensus [=============> ] 11.187439 s [racon::Polisher::polish] generating consensus [==============> ] 13.180807 s [racon::Polisher::polish] generating consensus [===============> ] 14.881567 s [racon::Polisher::polish] generating consensus [================> ] 16.386261 s [racon::Polisher::polish] generating consensus [=================> ] 17.735122 s [racon::Polisher::polish] generating consensus [==================> ] 18.518241 s [racon::Polisher::polish] generating consensus [===================>] 19.397887 s [racon::Polisher::polish] generating consensus [====================] 23.975901 s [racon::Polisher::] total = 24.081156 s [ OK ] RaconPolishingTest.ConsensusWithoutQualitiesAndWithAlignments (24109 ms) [ RUN ] RaconPolishingTest.ConsensusWithQualitiesLargerWindow [racon::Polisher::initialize] loaded target sequences 0.000741 s [racon::Polisher::initialize] loaded sequences 0.050800 s [racon::Polisher::initialize] loaded overlaps 0.000399 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.067077 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.105594 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.155913 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.191727 s [racon::Polisher::initialize] aligning overlaps [=====> ] 0.240289 s [racon::Polisher::initialize] aligning overlaps [======> ] 0.281311 s [racon::Polisher::initialize] aligning overlaps [=======> ] 0.382918 s [racon::Polisher::initialize] aligning overlaps [========> ] 0.433968 s [racon::Polisher::initialize] aligning overlaps [=========> ] 0.475815 s [racon::Polisher::initialize] aligning overlaps [==========> ] 0.512216 s [racon::Polisher::initialize] aligning overlaps [===========> ] 0.560404 s [racon::Polisher::initialize] aligning overlaps [============> ] 0.602256 s [racon::Polisher::initialize] aligning overlaps [=============> ] 0.648131 s [racon::Polisher::initialize] aligning overlaps [==============> ] 0.670073 s [racon::Polisher::initialize] aligning overlaps [===============> ] 0.699612 s [racon::Polisher::initialize] aligning overlaps [================> ] 0.771219 s [racon::Polisher::initialize] aligning overlaps [=================> ] 0.798422 s [racon::Polisher::initialize] aligning overlaps [==================> ] 0.834233 s [racon::Polisher::initialize] aligning overlaps [===================>] 0.888306 s [racon::Polisher::initialize] aligning overlaps [====================] 0.927766 s [racon::Polisher::initialize] transformed data into windows 0.068586 s [racon::Polisher::polish] generating consensus [=> ] 3.303560 s [racon::Polisher::polish] generating consensus [==> ] 3.303604 s [racon::Polisher::polish] generating consensus [===> ] 6.170665 s [racon::Polisher::polish] generating consensus [====> ] 6.171125 s [racon::Polisher::polish] generating consensus [=====> ] 7.490577 s [racon::Polisher::polish] generating consensus [======> ] 7.490619 s [racon::Polisher::polish] generating consensus [=======> ] 8.540632 s [racon::Polisher::polish] generating consensus [========> ] 8.540966 s [racon::Polisher::polish] generating consensus [=========> ] 10.564483 s [racon::Polisher::polish] generating consensus [==========> ] 10.614057 s [racon::Polisher::polish] generating consensus [===========> ] 14.354927 s [racon::Polisher::polish] generating consensus [============> ] 14.751832 s [racon::Polisher::polish] generating consensus [=============> ] 20.372914 s [racon::Polisher::polish] generating consensus [==============> ] 20.604065 s [racon::Polisher::polish] generating consensus [===============> ] 24.283137 s [racon::Polisher::polish] generating consensus [================> ] 24.283184 s [racon::Polisher::polish] generating consensus [=================> ] 27.989354 s [racon::Polisher::polish] generating consensus [==================> ] 27.989990 s [racon::Polisher::polish] generating consensus [===================>] 30.869287 s [racon::Polisher::polish] generating consensus [====================] 37.502729 s [racon::Polisher::] total = 38.608789 s [ OK ] RaconPolishingTest.ConsensusWithQualitiesLargerWindow (38709 ms) [ RUN ] RaconPolishingTest.ConsensusWithQualitiesEditDistance [racon::Polisher::initialize] loaded target sequences 0.001766 s [racon::Polisher::initialize] loaded sequences 0.057384 s [racon::Polisher::initialize] loaded overlaps 0.001325 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.095752 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.136547 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.172414 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.218448 s [racon::Polisher::initialize] aligning overlaps [=====> ] 0.254071 s [racon::Polisher::initialize] aligning overlaps [======> ] 0.286934 s [racon::Polisher::initialize] aligning overlaps [=======> ] 0.390752 s [racon::Polisher::initialize] aligning overlaps [========> ] 0.441724 s [racon::Polisher::initialize] aligning overlaps [=========> ] 0.482977 s [racon::Polisher::initialize] aligning overlaps [==========> ] 0.521052 s [racon::Polisher::initialize] aligning overlaps [===========> ] 0.573220 s [racon::Polisher::initialize] aligning overlaps [============> ] 0.616284 s [racon::Polisher::initialize] aligning overlaps [=============> ] 0.663295 s [racon::Polisher::initialize] aligning overlaps [==============> ] 0.685474 s [racon::Polisher::initialize] aligning overlaps [===============> ] 0.739141 s [racon::Polisher::initialize] aligning overlaps [================> ] 0.845593 s [racon::Polisher::initialize] aligning overlaps [=================> ] 0.871757 s [racon::Polisher::initialize] aligning overlaps [==================> ] 0.910518 s [racon::Polisher::initialize] aligning overlaps [===================>] 0.958736 s [racon::Polisher::initialize] aligning overlaps [====================] 0.994338 s [racon::Polisher::initialize] transformed data into windows 0.071429 s [racon::Polisher::polish] generating consensus [=> ] 0.872376 s [racon::Polisher::polish] generating consensus [==> ] 1.681056 s [racon::Polisher::polish] generating consensus [===> ] 2.324039 s [racon::Polisher::polish] generating consensus [====> ] 2.838381 s [racon::Polisher::polish] generating consensus [=====> ] 3.116643 s [racon::Polisher::polish] generating consensus [======> ] 4.017819 s [racon::Polisher::polish] generating consensus [=======> ] 4.308496 s [racon::Polisher::polish] generating consensus [========> ] 4.688169 s [racon::Polisher::polish] generating consensus [=========> ] 5.268457 s [racon::Polisher::polish] generating consensus [==========> ] 5.809949 s [racon::Polisher::polish] generating consensus [===========> ] 6.859686 s [racon::Polisher::polish] generating consensus [============> ] 7.579539 s [racon::Polisher::polish] generating consensus [=============> ] 9.924941 s [racon::Polisher::polish] generating consensus [==============> ] 11.704178 s [racon::Polisher::polish] generating consensus [===============> ] 13.108762 s [racon::Polisher::polish] generating consensus [================> ] 14.480161 s [racon::Polisher::polish] generating consensus [=================> ] 15.634692 s [racon::Polisher::polish] generating consensus [==================> ] 16.715644 s [racon::Polisher::polish] generating consensus [===================>] 17.899557 s [racon::Polisher::polish] generating consensus [====================] 21.070901 s [racon::Polisher::] total = 22.253155 s [ OK ] RaconPolishingTest.ConsensusWithQualitiesEditDistance (22283 ms) [ RUN ] RaconPolishingTest.FragmentCorrectionWithQualities [racon::Polisher::initialize] loaded target sequences 0.056213 s [racon::Polisher::initialize] loaded sequences 0.055520 s [racon::Polisher::initialize] loaded overlaps 0.020251 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.102621 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.169851 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.195887 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.239032 s [racon::Polisher::initialize] aligning overlaps [=====> ] 0.285678 s [racon::Polisher::initialize] aligning overlaps [======> ] 0.327224 s [racon::Polisher::initialize] aligning overlaps [=======> ] 0.405937 s [racon::Polisher::initialize] aligning overlaps [========> ] 0.454937 s [racon::Polisher::initialize] aligning overlaps [=========> ] 0.520176 s [racon::Polisher::initialize] aligning overlaps [==========> ] 0.579233 s [racon::Polisher::initialize] aligning overlaps [===========> ] 0.638265 s [racon::Polisher::initialize] aligning overlaps [============> ] 0.735073 s [racon::Polisher::initialize] aligning overlaps [=============> ] 0.798431 s [racon::Polisher::initialize] aligning overlaps [==============> ] 0.872175 s [racon::Polisher::initialize] aligning overlaps [===============> ] 0.923176 s [racon::Polisher::initialize] aligning overlaps [================> ] 1.001632 s [racon::Polisher::initialize] aligning overlaps [=================> ] 1.036321 s [racon::Polisher::initialize] aligning overlaps [==================> ] 1.058195 s [racon::Polisher::initialize] aligning overlaps [===================>] 1.103780 s [racon::Polisher::initialize] aligning overlaps [====================] 1.161322 s [racon::Polisher::initialize] transformed data into windows 0.108279 s [racon::Polisher::polish] generating consensus [=> ] 0.634733 s [racon::Polisher::polish] generating consensus [==> ] 1.364643 s [racon::Polisher::polish] generating consensus [===> ] 1.964447 s [racon::Polisher::polish] generating consensus [====> ] 1.964821 s [racon::Polisher::polish] generating consensus [=====> ] 2.315688 s [racon::Polisher::polish] generating consensus [======> ] 2.551933 s [racon::Polisher::polish] generating consensus [=======> ] 2.903126 s [racon::Polisher::polish] generating consensus [========> ] 2.925455 s [racon::Polisher::polish] generating consensus [=========> ] 3.796612 s [racon::Polisher::polish] generating consensus [==========> ] 4.156575 s [racon::Polisher::polish] generating consensus [===========> ] 4.436215 s [racon::Polisher::polish] generating consensus [============> ] 4.533245 s [racon::Polisher::polish] generating consensus [=============> ] 4.864384 s [racon::Polisher::polish] generating consensus [==============> ] 4.865007 s [racon::Polisher::polish] generating consensus [===============> ] 5.629278 s [racon::Polisher::polish] generating consensus [================> ] 5.630139 s [racon::Polisher::polish] generating consensus [=================> ] 7.198118 s [racon::Polisher::polish] generating consensus [==================> ] 7.703306 s [racon::Polisher::polish] generating consensus [===================>] 8.242185 s [racon::Polisher::polish] generating consensus [====================] 8.344627 s [racon::Polisher::] total = 9.748365 s [ OK ] RaconPolishingTest.FragmentCorrectionWithQualities (9779 ms) [ RUN ] RaconPolishingTest.FragmentCorrectionWithQualitiesFull [racon::Polisher::initialize] loaded target sequences 0.056533 s [racon::Polisher::initialize] loaded sequences 0.057830 s [racon::Polisher::initialize] loaded overlaps 0.016788 s [racon::Polisher::initialize] aligning overlaps [=> ] 1.204655 s [racon::Polisher::initialize] aligning overlaps [==> ] 1.998449 s [racon::Polisher::initialize] aligning overlaps [===> ] 2.784502 s [racon::Polisher::initialize] aligning overlaps [====> ] 3.922007 s [racon::Polisher::initialize] aligning overlaps [=====> ] 4.881445 s [racon::Polisher::initialize] aligning overlaps [======> ] 5.546734 s [racon::Polisher::initialize] aligning overlaps [=======> ] 6.656888 s [racon::Polisher::initialize] aligning overlaps [========> ] 8.194669 s [racon::Polisher::initialize] aligning overlaps [=========> ] 9.459030 s [racon::Polisher::initialize] aligning overlaps [==========> ] 10.658532 s [racon::Polisher::initialize] aligning overlaps [===========> ] 11.874081 s [racon::Polisher::initialize] aligning overlaps [============> ] 13.626550 s [racon::Polisher::initialize] aligning overlaps [=============> ] 15.370028 s [racon::Polisher::initialize] aligning overlaps [==============> ] 16.465893 s [racon::Polisher::initialize] aligning overlaps [===============> ] 17.686841 s [racon::Polisher::initialize] aligning overlaps [================> ] 18.790028 s [racon::Polisher::initialize] aligning overlaps [=================> ] 19.907372 s [racon::Polisher::initialize] aligning overlaps [==================> ] 21.046013 s [racon::Polisher::initialize] aligning overlaps [===================>] 22.313991 s [racon::Polisher::initialize] aligning overlaps [====================] 23.211198 s [racon::Polisher::initialize] transformed data into windows 2.263971 s [racon::Polisher::polish] generating consensus [=> ] 32.856625 s [racon::Polisher::polish] generating consensus [==> ] 55.004120 s [racon::Polisher::polish] generating consensus [===> ] 77.821983 s [racon::Polisher::polish] generating consensus [====> ] 97.389679 s [racon::Polisher::polish] generating consensus [=====> ] 119.581807 s [racon::Polisher::polish] generating consensus [======> ] 145.202876 s [racon::Polisher::polish] generating consensus [=======> ] 171.516629 s [racon::Polisher::polish] generating consensus [========> ] 190.846839 s [racon::Polisher::polish] generating consensus [=========> ] 215.498109 s [racon::Polisher::polish] generating consensus [==========> ] 245.475877 s [racon::Polisher::polish] generating consensus [===========> ] 269.298122 s [racon::Polisher::polish] generating consensus [============> ] 296.360684 s [racon::Polisher::polish] generating consensus [=============> ] 320.192637 s [racon::Polisher::polish] generating consensus [==============> ] 346.660313 s [racon::Polisher::polish] generating consensus [===============> ] 374.101576 s [racon::Polisher::polish] generating consensus [================> ] 390.488673 s [racon::Polisher::polish] generating consensus [=================> ] 422.374269 s [racon::Polisher::polish] generating consensus [==================> ] 450.395657 s [racon::Polisher::polish] generating consensus [===================>] 477.025591 s [racon::Polisher::polish] generating consensus [====================] 500.498752 s [racon::Polisher::] total = 526.109877 s [ OK ] RaconPolishingTest.FragmentCorrectionWithQualitiesFull (526137 ms) [ RUN ] RaconPolishingTest.FragmentCorrectionWithoutQualitiesFull [racon::Polisher::initialize] loaded target sequences 0.026307 s [racon::Polisher::initialize] loaded sequences 0.023345 s [racon::Polisher::initialize] loaded overlaps 0.013993 s [racon::Polisher::initialize] aligning overlaps [=> ] 1.240571 s [racon::Polisher::initialize] aligning overlaps [==> ] 2.045298 s [racon::Polisher::initialize] aligning overlaps [===> ] 2.767854 s [racon::Polisher::initialize] aligning overlaps [====> ] 3.812214 s [racon::Polisher::initialize] aligning overlaps [=====> ] 4.701792 s [racon::Polisher::initialize] aligning overlaps [======> ] 5.346782 s [racon::Polisher::initialize] aligning overlaps [=======> ] 6.249015 s [racon::Polisher::initialize] aligning overlaps [========> ] 7.437292 s [racon::Polisher::initialize] aligning overlaps [=========> ] 8.506571 s [racon::Polisher::initialize] aligning overlaps [==========> ] 9.589852 s [racon::Polisher::initialize] aligning overlaps [===========> ] 10.397312 s [racon::Polisher::initialize] aligning overlaps [============> ] 11.576736 s [racon::Polisher::initialize] aligning overlaps [=============> ] 12.782395 s [racon::Polisher::initialize] aligning overlaps [==============> ] 13.887826 s [racon::Polisher::initialize] aligning overlaps [===============> ] 15.218555 s [racon::Polisher::initialize] aligning overlaps [================> ] 16.449670 s [racon::Polisher::initialize] aligning overlaps [=================> ] 17.485617 s [racon::Polisher::initialize] aligning overlaps [==================> ] 18.817538 s [racon::Polisher::initialize] aligning overlaps [===================>] 19.950325 s [racon::Polisher::initialize] aligning overlaps [====================] 20.538457 s [racon::Polisher::initialize] transformed data into windows 0.026131 s [racon::Polisher::polish] generating consensus [=> ] 45.986543 s [racon::Polisher::polish] generating consensus [==> ] 78.714499 s [racon::Polisher::polish] generating consensus [===> ] 114.805728 s [racon::Polisher::polish] generating consensus [====> ] 141.477077 s [racon::Polisher::polish] generating consensus [=====> ] 173.330735 s [racon::Polisher::polish] generating consensus [======> ] 207.877166 s [racon::Polisher::polish] generating consensus [=======> ] 245.054532 s [racon::Polisher::polish] generating consensus [========> ] 271.507978 s [racon::Polisher::polish] generating consensus [=========> ] 305.411633 s [racon::Polisher::polish] generating consensus [==========> ] 346.719193 s [racon::Polisher::polish] generating consensus [===========> ] 383.365426 s [racon::Polisher::polish] generating consensus [============> ] 420.509592 s [racon::Polisher::polish] generating consensus [=============> ] 455.669206 s [racon::Polisher::polish] generating consensus [==============> ] 490.733704 s [racon::Polisher::polish] generating consensus [===============> ] 526.250552 s [racon::Polisher::polish] generating consensus [================> ] 546.214330 s [racon::Polisher::polish] generating consensus [=================> ] 591.174946 s [racon::Polisher::polish] generating consensus [==================> ] 633.921819 s [racon::Polisher::polish] generating consensus [===================>] 672.178526 s [racon::Polisher::polish] generating consensus [====================] 704.452432 s [racon::Polisher::] total = 725.084337 s [ OK ] RaconPolishingTest.FragmentCorrectionWithoutQualitiesFull (725114 ms) [ RUN ] RaconPolishingTest.FragmentCorrectionWithQualitiesFullMhap [racon::Polisher::initialize] loaded target sequences 0.056800 s [racon::Polisher::initialize] loaded sequences 0.057355 s [racon::Polisher::initialize] loaded overlaps 0.019750 s [racon::Polisher::initialize] aligning overlaps [=> ] 1.272656 s [racon::Polisher::initialize] aligning overlaps [==> ] 2.031544 s [racon::Polisher::initialize] aligning overlaps [===> ] 2.736109 s [racon::Polisher::initialize] aligning overlaps [====> ] 3.783869 s [racon::Polisher::initialize] aligning overlaps [=====> ] 4.710877 s [racon::Polisher::initialize] aligning overlaps [======> ] 5.354236 s [racon::Polisher::initialize] aligning overlaps [=======> ] 6.300606 s [racon::Polisher::initialize] aligning overlaps [========> ] 7.526900 s [racon::Polisher::initialize] aligning overlaps [=========> ] 8.596895 s [racon::Polisher::initialize] aligning overlaps [==========> ] 9.678951 s [racon::Polisher::initialize] aligning overlaps [===========> ] 10.493115 s [racon::Polisher::initialize] aligning overlaps [============> ] 11.684510 s [racon::Polisher::initialize] aligning overlaps [=============> ] 12.881121 s [racon::Polisher::initialize] aligning overlaps [==============> ] 13.900663 s [racon::Polisher::initialize] aligning overlaps [===============> ] 15.192815 s [racon::Polisher::initialize] aligning overlaps [================> ] 16.363521 s [racon::Polisher::initialize] aligning overlaps [=================> ] 17.406192 s [racon::Polisher::initialize] aligning overlaps [==================> ] 18.570183 s [racon::Polisher::initialize] aligning overlaps [===================>] 19.841633 s [racon::Polisher::initialize] aligning overlaps [====================] 20.527971 s [racon::Polisher::initialize] transformed data into windows 1.813238 s [racon::Polisher::polish] generating consensus [=> ] 31.830965 s [racon::Polisher::polish] generating consensus [==> ] 54.223652 s [racon::Polisher::polish] generating consensus [===> ] 79.098185 s [racon::Polisher::polish] generating consensus [====> ] 100.057898 s [racon::Polisher::polish] generating consensus [=====> ] 121.931474 s [racon::Polisher::polish] generating consensus [======> ] 147.941624 s [racon::Polisher::polish] generating consensus [=======> ] 174.562600 s [racon::Polisher::polish] generating consensus [========> ] 193.870530 s [racon::Polisher::polish] generating consensus [=========> ] 218.548246 s [racon::Polisher::polish] generating consensus [==========> ] 247.329583 s [racon::Polisher::polish] generating consensus [===========> ] 270.805866 s [racon::Polisher::polish] generating consensus [============> ] 297.928251 s [racon::Polisher::polish] generating consensus [=============> ] 321.716137 s [racon::Polisher::polish] generating consensus [==============> ] 346.850922 s [racon::Polisher::polish] generating consensus [===============> ] 374.373063 s [racon::Polisher::polish] generating consensus [================> ] 389.391014 s [racon::Polisher::polish] generating consensus [=================> ] 421.090512 s [racon::Polisher::polish] generating consensus [==================> ] 449.372188 s [racon::Polisher::polish] generating consensus [===================>] 475.715501 s [racon::Polisher::polish] generating consensus [====================] 496.579008 s [racon::Polisher::] total = 519.058997 s [ OK ] RaconPolishingTest.FragmentCorrectionWithQualitiesFullMhap (519086 ms) [----------] 10 tests from RaconPolishingTest (1930875 ms total) [----------] Global test environment tear-down [==========] 15 tests from 2 test suites ran. (1930904 ms total) [ PASSED ] 15 tests. make[1]: Leaving directory '/build/reproducible-path/racon-1.5.0' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake dh_auto_install --destdir=debian/racon/ -O--buildsystem=cmake cd obj-i686-linux-gnu && make -j11 install DESTDIR=/build/reproducible-path/racon-1.5.0/debian/racon AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/racon-1.5.0 -B/build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/racon-1.5.0/debian/racon/usr/bin/racon make[1]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-i686-linux-gnu' dh_install -O--buildsystem=cmake dh_installdocs -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake dh_installexamples -O--buildsystem=cmake dh_installman -O--buildsystem=cmake dh_installsystemduser -O--buildsystem=cmake dh_lintian -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake dh_compress -O--buildsystem=cmake dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake dh_dwz -a -O--buildsystem=cmake dh_strip -a -O--buildsystem=cmake dh_makeshlibs -a -O--buildsystem=cmake dh_shlibdeps -a -O--buildsystem=cmake dh_installdeb -O--buildsystem=cmake dh_gencontrol -O--buildsystem=cmake dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: building package 'racon-dbgsym' in '../racon-dbgsym_1.5.0-3_i386.deb'. dpkg-deb: building package 'racon' in '../racon_1.5.0-3_i386.deb'. dpkg-genbuildinfo --build=binary -O../racon_1.5.0-3_i386.buildinfo dpkg-genchanges --build=binary -O../racon_1.5.0-3_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/60897 and its subdirectories I: Current time: Sun Mar 9 11:25:55 -12 2025 I: pbuilder-time-stamp: 1741562755