I: pbuilder: network access will be disabled during build
I: Current time: Fri Feb 13 04:47:24 -12 2026
I: pbuilder-time-stamp: 1771001244
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [sra-sdk_3.0.9+dfsg-7.dsc]
I: copying [./sra-sdk_3.0.9+dfsg.orig.tar.xz]
I: copying [./sra-sdk_3.0.9+dfsg-7.debian.tar.xz]
I: Extracting source
dpkg-source: warning: cannot verify inline signature for ./sra-sdk_3.0.9+dfsg-7.dsc: unsupported subcommand
dpkg-source: info: extracting sra-sdk in sra-sdk-3.0.9+dfsg
dpkg-source: info: unpacking sra-sdk_3.0.9+dfsg.orig.tar.xz
dpkg-source: info: unpacking sra-sdk_3.0.9+dfsg-7.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying set_explicit_path_to_schemata.patch
dpkg-source: info: applying python3
dpkg-source: info: applying skip_test_using_lots_of_memory.patch
dpkg-source: info: applying find_ncbi-vdb-interfaces.patch
dpkg-source: info: applying link_vdb_dynamically.patch
dpkg-source: info: applying use_debian_packaged_re2.patch
dpkg-source: info: applying use_debian_packaged_compression_libs.patch
dpkg-source: info: applying use_soversions.patch
dpkg-source: info: applying label_online_tests.patch
dpkg-source: info: applying prefer_dynamic_libraries.patch
dpkg-source: info: applying fix_ngs-c++-underlinkage.patch
dpkg-source: info: applying use_c_locale_for_comma.patch
dpkg-source: info: applying no_sse4.2.patch
dpkg-source: info: applying fix_arm64_build.patch
dpkg-source: info: applying support_libre2-11.patch
dpkg-source: info: applying missing_include.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/970501/tmp/hooks/D02_print_environment starting
I: set
  BUILDDIR='/build/reproducible-path'
  BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
  BUILDUSERNAME='pbuilder1'
  BUILD_ARCH='arm64'
  DEBIAN_FRONTEND='noninteractive'
  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 '
  DISTRIBUTION='unstable'
  HOME='/root'
  HOST_ARCH='arm64'
  IFS=' 	
  '
  INVOCATION_ID='0a89471a999349ff99994783fa718f7b'
  LANG='C'
  LANGUAGE='en_US:en'
  LC_ALL='C'
  MAIL='/var/mail/root'
  OPTIND='1'
  PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
  PBCURRENTCOMMANDLINEOPERATION='build'
  PBUILDER_OPERATION='build'
  PBUILDER_PKGDATADIR='/usr/share/pbuilder'
  PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
  PBUILDER_SYSCONFDIR='/etc'
  PPID='970501'
  PS1='# '
  PS2='> '
  PS4='+ '
  PWD='/'
  SHELL='/bin/bash'
  SHLVL='2'
  SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.KpUYQGCC/pbuilderrc_oZQ7 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.KpUYQGCC/b1 --logfile b1/build.log sra-sdk_3.0.9+dfsg-7.dsc'
  SUDO_GID='109'
  SUDO_UID='104'
  SUDO_USER='jenkins'
  TERM='unknown'
  TZ='/usr/share/zoneinfo/Etc/GMT+12'
  USER='root'
  _='/usr/bin/systemd-run'
  http_proxy='http://192.168.101.4:3128'
I: uname -a
  Linux codethink03-arm64 6.1.0-28-cloud-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux
I: ls -l /bin
  lrwxrwxrwx 1 root root 7 Nov 22  2024 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/970501/tmp/hooks/D02_print_environment finished
 -> Attempting to satisfy build-dependencies
 -> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: arm64
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
 This package was created automatically by pbuilder to satisfy the
 build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), cmake, d-shlibs, dh-python, javahelper, libabsl-dev, libncbi-vdb-dev (>= 3.0.9+dfsg~), libfuse-dev, libhdf5-dev, libmagic-dev, libre2-dev, libxml2-dev, libzstd-dev, liblzma-dev, libsam-extract-dev, maven-repo-helper, python3-all, default-jdk, flex, bison
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19963 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
 pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
  Package debhelper-compat is not installed.
 pbuilder-satisfydepends-dummy depends on cmake; however:
  Package cmake is not installed.
 pbuilder-satisfydepends-dummy depends on d-shlibs; however:
  Package d-shlibs is not installed.
 pbuilder-satisfydepends-dummy depends on dh-python; however:
  Package dh-python is not installed.
 pbuilder-satisfydepends-dummy depends on javahelper; however:
  Package javahelper is not installed.
 pbuilder-satisfydepends-dummy depends on libabsl-dev; however:
  Package libabsl-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libncbi-vdb-dev (>= 3.0.9+dfsg~); however:
  Package libncbi-vdb-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libfuse-dev; however:
  Package libfuse-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libhdf5-dev; however:
  Package libhdf5-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libmagic-dev; however:
  Package libmagic-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libre2-dev; however:
  Package libre2-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libxml2-dev; however:
  Package libxml2-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libzstd-dev; however:
  Package libzstd-dev is not installed.
 pbuilder-satisfydepends-dummy depends on liblzma-dev; however:
  Package liblzma-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libsam-extract-dev; however:
  Package libsam-extract-dev is not installed.
 pbuilder-satisfydepends-dummy depends on maven-repo-helper; however:
  Package maven-repo-helper is not installed.
 pbuilder-satisfydepends-dummy depends on python3-all; however:
  Package python3-all is not installed.
 pbuilder-satisfydepends-dummy depends on default-jdk; however:
  Package default-jdk is not installed.
 pbuilder-satisfydepends-dummy depends on flex; however:
  Package flex is not installed.
 pbuilder-satisfydepends-dummy depends on bison; however:
  Package bison is not installed.

Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
  adwaita-icon-theme{a} at-spi2-common{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} binfmt-support{a} bison{a} bsdextrautils{a} ca-certificates{a} ca-certificates-java{a} cmake{a} cmake-data{a} comerr-dev{a} d-shlibs{a} dbus{a} dbus-bin{a} dbus-daemon{a} dbus-session-bus-common{a} dbus-system-bus-common{a} dbus-user-session{a} dconf-gsettings-backend{a} dconf-service{a} dctrl-tools{a} debhelper{a} default-jdk{a} default-jdk-headless{a} default-jre{a} default-jre-headless{a} devscripts{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dirmngr{a} dwz{a} fastjar{a} file{a} flex{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} gettext{a} gettext-base{a} gnupg{a} gnupg-l10n{a} gpg{a} gpg-agent{a} gpgconf{a} gpgsm{a} gpgv{a} groff-base{a} gtk-update-icon-cache{a} hdf5-helpers{a} hicolor-icon-theme{a} icu-devtools{a} intltool-debian{a} jarwrapper{a} java-common{a} javahelper{a} krb5-multidev{a} libabsl-dev{a} libabsl20230802{a} libaec-dev{a} libaec0{a} libapparmor1{a} libarchive-zip-perl{a} libarchive13t64{a} libasound2-data{a} libasound2t64{a} libassuan9{a} libatk-bridge2.0-0t64{a} libatk1.0-0t64{a} libatspi2.0-0t64{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libb-hooks-op-check-perl{a} libbrotli-dev{a} libbrotli1{a} libbz2-dev{a} libcairo-gobject2{a} libcairo2{a} libclass-method-modifiers-perl{a} libclass-xsaccessor-perl{a} libclone-perl{a} libcloudproviders0{a} libcolord2{a} libcom-err2{a} libcups2t64{a} libcurl4-openssl-dev{a} libcurl4t64{a} libdatrie1{a} libdbus-1-3{a} libdconf1{a} libdebhelper-perl{a} libdeflate0{a} libdevel-callchecker-perl{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-radeon1{a} libdrm2{a} libdynaloader-functions-perl{a} libedit2{a} libelf1t64{a} libencode-locale-perl{a} libepoxy0{a} libevent-2.1-7t64{a} libexpat1{a} libffi8{a} libfile-dirlist-perl{a} libfile-homedir-perl{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libfile-touch-perl{a} libfile-which-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libfuse-dev{a} libgbm1{a} libgcrypt20{a} libgdk-pixbuf-2.0-0{a} libgdk-pixbuf2.0-common{a} libgfortran5{a} libgif7{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglib2.0-0t64{a} libglvnd0{a} libglx-mesa0{a} libglx0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgnutls30t64{a} libgpg-error0{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgssrpc4t64{a} libgtk-3-0t64{a} libgtk-3-common{a} libharfbuzz0b{a} libhdf5-310{a} libhdf5-cpp-310{a} libhdf5-dev{a} libhdf5-fortran-310{a} libhdf5-hl-310{a} libhdf5-hl-cpp-310{a} libhdf5-hl-fortran-310{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libicu-dev{a} libicu72{a} libidn2-0{a} libidn2-dev{a} libimport-into-perl{a} libio-html-perl{a} libio-pty-perl{a} libio-socket-ssl-perl{a} libipc-run-perl{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjsoncpp26{a} libk5crypto3{a} libkadm5clnt-mit12{a} libkadm5srv-mit12{a} libkdb5-10t64{a} libkeyutils1{a} libkrb5-3{a} libkrb5-dev{a} libkrb5support0{a} libksba8{a} liblcms2-2{a} libldap-2.5-0{a} libldap-dev{a} liblerc4{a} libllvm19{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} liblzma-dev{a} libmagic-dev{a} libmagic-mgc{a} libmagic1t64{a} libmbedcrypto16{a} libmbedtls21{a} libmbedx509-7{a} libmodule-runtime-perl{a} libmoo-perl{a} libncbi-vdb-dev{a} libncbi-vdb3{a} libncbi-wvdb-dev{a} libncbi-wvdb3{a} libnet-http-perl{a} libnet-ssleay-perl{a} libnghttp2-14{a} libnghttp2-dev{a} libnpth0t64{a} libnsl2{a} libnspr4{a} libnss3{a} libp11-kit-dev{a} libp11-kit0{a} libpam-systemd{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libparams-classify-perl{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpcsclite1{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng16-16t64{a} libproc2-0{a} libpsl-dev{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libre2-11{a} libre2-dev{a} libreadline8t64{a} librhash1{a} librole-tiny-perl{a} librtmp-dev{a} librtmp1{a} libsam-extract-dev{a} libsam-extract3{a} libsasl2-2{a} libsasl2-modules-db{a} libselinux1-dev{a} libsensors-config{a} libsensors5{a} libsepol-dev{a} libsharpyuv0{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libsub-quote-perl{a} libsystemd-shared{a} libsz2{a} libtasn1-6{a} libtasn1-6-dev{a} libthai-data{a} libthai0{a} libtiff6{a} libtimedate-perl{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} libunbound8{a} libunistring5{a} liburi-perl{a} libuv1t64{a} libvulkan1{a} libwayland-client0{a} libwayland-cursor0{a} libwayland-egl1{a} libwayland-server0{a} libwebp7{a} libwww-perl{a} libwww-robotrules-perl{a} libx11-6{a} libx11-data{a} libx11-xcb1{a} libxau6{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-xfixes0{a} libxcb1{a} libxcomposite1{a} libxcursor1{a} libxdamage1{a} libxdmcp6{a} libxext6{a} libxfixes3{a} libxi6{a} libxinerama1{a} libxkbcommon0{a} libxml2{a} libxml2-dev{a} libxrandr2{a} libxrender1{a} libxshmfence1{a} libxtst6{a} libxxf86vm1{a} libz3-4{a} libzstd-dev{a} m4{a} man-db{a} maven-repo-helper{a} media-types{a} mesa-libgallium{a} ncbi-vdb-data{a} netbase{a} nettle-dev{a} openjdk-21-jdk{a} openjdk-21-jdk-headless{a} openjdk-21-jre{a} openjdk-21-jre-headless{a} openssl{a} patchutils{a} perl-openssl-defaults{a} pinentry-curses{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} python3{a} python3-all{a} python3-autocommand{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-pkg-resources{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} shared-mime-info{a} sopv-gpgv{a} systemd{a} systemd-sysv{a} tzdata{a} wdiff{a} x11-common{a} xkb-data{a} zlib1g-dev{a} 
The following packages are RECOMMENDED but will NOT be installed:
  alsa-topology-conf alsa-ucm-conf at-spi2-core bzip2-doc chrony curl debian-keyring dput dput-ng dupload equivs fonts-dejavu-extra gnupg-utils gpg-wks-client krb5-locales libarchive-cpio-perl libatk-wrapper-java-jni libdata-dump-perl libdistro-info-perl libfl-dev libgdk-pixbuf2.0-bin libgit-wrapper-perl libgitlab-api-v4-perl libglib2.0-data libgmock-dev libgpg-error-l10n libgtk-3-bin libhtml-form-perl libhtml-format-perl libhttp-daemon-perl libio-compress-brotli-perl libjson-perl libkmod2 libldap-common liblist-compare-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libnamespace-clean-perl libnss-systemd librsvg2-common libsasl2-modules libsoap-lite-perl libstring-shellquote-perl libtasn1-doc libxstring-perl libxt-dev licensecheck lintian linux-sysctl-defaults lynx mesa-vulkan-drivers ntpsec openntpd pristine-tar psmisc publicsuffix python3-apt python3-argcomplete python3-debian python3-magic python3-requests python3-unidiff python3-xdg strace systemd-cryptsetup systemd-timesyncd unzip wget xdg-user-dirs 
0 packages upgraded, 360 newly installed, 0 to remove and 0 not upgraded.
Need to get 297 MB of archives. After unpacking 1053 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian unstable/main arm64 libapparmor1 arm64 3.1.7-1+b3 [41.8 kB]
Get: 2 http://deb.debian.org/debian unstable/main arm64 libsystemd-shared arm64 257.2-1 [1908 kB]
Get: 3 http://deb.debian.org/debian unstable/main arm64 systemd arm64 257.2-1 [3371 kB]
Get: 4 http://deb.debian.org/debian unstable/main arm64 systemd-sysv arm64 257.2-1 [60.3 kB]
Get: 5 http://deb.debian.org/debian unstable/main arm64 libdbus-1-3 arm64 1.16.0-1 [168 kB]
Get: 6 http://deb.debian.org/debian unstable/main arm64 dbus-bin arm64 1.16.0-1 [77.7 kB]
Get: 7 http://deb.debian.org/debian unstable/main arm64 dbus-session-bus-common all 1.16.0-1 [51.1 kB]
Get: 8 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.6.4-1 [90.7 kB]
Get: 9 http://deb.debian.org/debian unstable/main arm64 dbus-daemon arm64 1.16.0-1 [150 kB]
Get: 10 http://deb.debian.org/debian unstable/main arm64 dbus-system-bus-common all 1.16.0-1 [52.2 kB]
Get: 11 http://deb.debian.org/debian unstable/main arm64 dbus arm64 1.16.0-1 [69.4 kB]
Get: 12 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB]
Get: 13 http://deb.debian.org/debian unstable/main arm64 binfmt-support arm64 2.2.2-7+b1 [68.2 kB]
Get: 14 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-5 [284 kB]
Get: 15 http://deb.debian.org/debian unstable/main arm64 flex arm64 2.6.4-8.2+b4 [412 kB]
Get: 16 http://deb.debian.org/debian unstable/main arm64 libpython3.13-minimal arm64 3.13.1-3 [852 kB]
Get: 17 http://deb.debian.org/debian unstable/main arm64 python3.13-minimal arm64 3.13.1-3 [1990 kB]
Get: 18 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.13.1-2 [27.0 kB]
Get: 19 http://deb.debian.org/debian unstable/main arm64 media-types all 10.1.0 [26.9 kB]
Get: 20 http://deb.debian.org/debian unstable/main arm64 netbase all 6.4 [12.8 kB]
Get: 21 http://deb.debian.org/debian unstable/main arm64 tzdata all 2024b-5 [256 kB]
Get: 22 http://deb.debian.org/debian unstable/main arm64 libffi8 arm64 3.4.6-1 [20.9 kB]
Get: 23 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.2-6 [69.4 kB]
Get: 24 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.2-6 [159 kB]
Get: 25 http://deb.debian.org/debian unstable/main arm64 libpython3.13-stdlib arm64 3.13.1-3 [1912 kB]
Get: 26 http://deb.debian.org/debian unstable/main arm64 python3.13 arm64 3.13.1-3 [740 kB]
Get: 27 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.13.1-2 [9952 B]
Get: 28 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.13.1-2 [28.0 kB]
Get: 29 http://deb.debian.org/debian unstable/main arm64 libpython3.12-minimal arm64 3.12.8-4 [810 kB]
Get: 30 http://deb.debian.org/debian unstable/main arm64 python3.12-minimal arm64 3.12.8-4 [1940 kB]
Get: 31 http://deb.debian.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-6 [62.3 kB]
Get: 32 http://deb.debian.org/debian unstable/main arm64 procps arm64 2:4.0.4-6 [872 kB]
Get: 33 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.24 [24.8 kB]
Get: 34 http://deb.debian.org/debian unstable/main arm64 openssl arm64 3.4.0-2 [1385 kB]
Get: 35 http://deb.debian.org/debian unstable/main arm64 ca-certificates all 20241223 [164 kB]
Get: 36 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB]
Get: 37 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB]
Get: 38 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.45-3+b1 [43.4 kB]
Get: 39 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.22.5-4 [198 kB]
Get: 40 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB]
Get: 41 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-7 [1129 kB]
Get: 42 http://deb.debian.org/debian unstable/main arm64 libpam-systemd arm64 257.2-1 [271 kB]
Get: 43 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.40.3-1 [91.5 kB]
Get: 44 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.0-1 [1404 kB]
Get: 45 http://deb.debian.org/debian unstable/main arm64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [311 kB]
Get: 46 http://deb.debian.org/debian unstable/main arm64 libglib2.0-0t64 arm64 2.82.4-1 [1411 kB]
Get: 47 http://deb.debian.org/debian unstable/main arm64 libicu72 arm64 72.1-6 [9239 kB]
Get: 48 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB]
Get: 49 http://deb.debian.org/debian unstable/main arm64 shared-mime-info arm64 2.4-5+b1 [755 kB]
Get: 50 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo arm64 1:2.1.5-3+b1 [173 kB]
Get: 51 http://deb.debian.org/debian unstable/main arm64 libpng16-16t64 arm64 1.6.45-1 [273 kB]
Get: 52 http://deb.debian.org/debian unstable/main arm64 libdeflate0 arm64 1.22-1 [42.2 kB]
Get: 53 http://deb.debian.org/debian unstable/main arm64 libjbig0 arm64 2.1-6.1+b2 [30.4 kB]
Get: 54 http://deb.debian.org/debian unstable/main arm64 liblerc4 arm64 4.0.0+ds-5 [146 kB]
Get: 55 http://deb.debian.org/debian unstable/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [114 kB]
Get: 56 http://deb.debian.org/debian unstable/main arm64 libwebp7 arm64 1.5.0-0.1 [271 kB]
Get: 57 http://deb.debian.org/debian unstable/main arm64 libtiff6 arm64 4.5.1+git230720-5 [309 kB]
Get: 58 http://deb.debian.org/debian unstable/main arm64 libgdk-pixbuf-2.0-0 arm64 2.42.12+dfsg-1+b1 [131 kB]
Get: 59 http://deb.debian.org/debian unstable/main arm64 gtk-update-icon-cache arm64 4.16.12+ds-1 [50.2 kB]
Get: 60 http://deb.debian.org/debian unstable/main arm64 hicolor-icon-theme all 0.18-1 [12.0 kB]
Get: 61 http://deb.debian.org/debian unstable/main arm64 adwaita-icon-theme all 47.0-2 [463 kB]
Get: 62 http://deb.debian.org/debian unstable/main arm64 at-spi2-common all 2.54.0-1 [170 kB]
Get: 63 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3 [493 kB]
Get: 64 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB]
Get: 65 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB]
Get: 66 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.22.5-4 [723 kB]
Get: 67 http://deb.debian.org/debian unstable/main arm64 bison arm64 2:3.8.2+dfsg-1+b2 [1149 kB]
Get: 68 http://deb.debian.org/debian unstable/main arm64 ca-certificates-java all 20240118 [11.6 kB]
Get: 69 http://deb.debian.org/debian unstable/main arm64 cmake-data all 3.31.3-1 [2268 kB]
Get: 70 http://deb.debian.org/debian unstable/main arm64 libarchive13t64 arm64 3.7.4-1.1 [323 kB]
Get: 71 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b6 [297 kB]
Get: 72 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.21.3-3 [32.1 kB]
Get: 73 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.2-1 [23.9 kB]
Get: 74 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.21.3-3 [80.8 kB]
Get: 75 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-4 [9352 B]
Get: 76 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.21.3-3 [310 kB]
Get: 77 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.21.3-3 [126 kB]
Get: 78 http://deb.debian.org/debian unstable/main arm64 libunistring5 arm64 1.3-1 [449 kB]
Get: 79 http://deb.debian.org/debian unstable/main arm64 libidn2-0 arm64 2.3.7-2+b1 [127 kB]
Get: 80 http://deb.debian.org/debian unstable/main arm64 libp11-kit0 arm64 0.25.5-3 [409 kB]
Get: 81 http://deb.debian.org/debian unstable/main arm64 libtasn1-6 arm64 4.19.0-3+b3 [46.9 kB]
Get: 82 http://deb.debian.org/debian unstable/main arm64 libgnutls30t64 arm64 3.8.8-2 [1363 kB]
Get: 83 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-8 [20.0 kB]
Get: 84 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-8 [55.4 kB]
Get: 85 http://deb.debian.org/debian unstable/main arm64 libldap-2.5-0 arm64 2.5.19+dfsg-1 [175 kB]
Get: 86 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1 [71.3 kB]
Get: 87 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB]
Get: 88 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b5 [56.8 kB]
Get: 89 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB]
Get: 90 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.11.1-1 [325 kB]
Get: 91 http://deb.debian.org/debian unstable/main arm64 libjsoncpp26 arm64 1.9.6-3 [72.9 kB]
Get: 92 http://deb.debian.org/debian unstable/main arm64 librhash1 arm64 1.4.5-1 [129 kB]
Get: 93 http://deb.debian.org/debian unstable/main arm64 libuv1t64 arm64 1.48.0-7 [143 kB]
Get: 94 http://deb.debian.org/debian unstable/main arm64 cmake arm64 3.31.3-1 [9878 kB]
Get: 95 http://deb.debian.org/debian unstable/main arm64 comerr-dev arm64 2.1-1.47.2-1 [55.9 kB]
Get: 96 http://deb.debian.org/debian unstable/main arm64 d-shlibs all 0.109 [11.1 kB]
Get: 97 http://deb.debian.org/debian unstable/main arm64 dbus-user-session arm64 1.16.0-1 [51.0 kB]
Get: 98 http://deb.debian.org/debian unstable/main arm64 libdconf1 arm64 0.40.0-4+b3 [40.4 kB]
Get: 99 http://deb.debian.org/debian unstable/main arm64 dconf-service arm64 0.40.0-4+b3 [31.1 kB]
Get: 100 http://deb.debian.org/debian unstable/main arm64 dconf-gsettings-backend arm64 0.40.0-4+b3 [27.4 kB]
Get: 101 http://deb.debian.org/debian unstable/main arm64 dctrl-tools arm64 2.24-3+b1 [125 kB]
Get: 102 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.23 [90.6 kB]
Get: 103 http://deb.debian.org/debian unstable/main arm64 libtool all 2.5.4-2 [539 kB]
Get: 104 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB]
Get: 105 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 106 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB]
Get: 107 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B]
Get: 108 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB]
Get: 109 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB]
Get: 110 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.22.5-4 [1532 kB]
Get: 111 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 112 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 113 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.23 [919 kB]
Get: 114 http://deb.debian.org/debian unstable/main arm64 java-common all 0.76 [6776 B]
Get: 115 http://deb.debian.org/debian unstable/main arm64 liblcms2-2 arm64 2.16-2 [151 kB]
Get: 116 http://deb.debian.org/debian unstable/main arm64 libnspr4 arm64 2:4.36-1 [102 kB]
Get: 117 http://deb.debian.org/debian unstable/main arm64 libnss3 arm64 2:3.107-1 [1289 kB]
Get: 118 http://deb.debian.org/debian unstable/main arm64 libpcsclite1 arm64 2.3.1-1 [55.3 kB]
Get: 119 http://deb.debian.org/debian unstable/main arm64 openjdk-21-jre-headless arm64 21.0.6~6ea-1 [40.6 MB]
Get: 120 http://deb.debian.org/debian unstable/main arm64 default-jre-headless arm64 2:1.21-76 [3192 B]
Get: 121 http://deb.debian.org/debian unstable/main arm64 libatk1.0-0t64 arm64 2.54.0-1 [49.7 kB]
Get: 122 http://deb.debian.org/debian unstable/main arm64 libxau6 arm64 1:1.0.11-1 [20.6 kB]
Get: 123 http://deb.debian.org/debian unstable/main arm64 libxdmcp6 arm64 1:1.1.5-1 [27.8 kB]
Get: 124 http://deb.debian.org/debian unstable/main arm64 libxcb1 arm64 1.17.0-2+b1 [143 kB]
Get: 125 http://deb.debian.org/debian unstable/main arm64 libx11-data all 2:1.8.10-2 [337 kB]
Get: 126 http://deb.debian.org/debian unstable/main arm64 libx11-6 arm64 2:1.8.10-2 [789 kB]
Get: 127 http://deb.debian.org/debian unstable/main arm64 libxext6 arm64 2:1.3.4-1+b3 [49.2 kB]
Get: 128 http://deb.debian.org/debian unstable/main arm64 libxi6 arm64 2:1.8.2-1 [77.8 kB]
Get: 129 http://deb.debian.org/debian unstable/main arm64 libatspi2.0-0t64 arm64 2.54.0-1 [72.9 kB]
Get: 130 http://deb.debian.org/debian unstable/main arm64 libatk-bridge2.0-0t64 arm64 2.54.0-1 [64.4 kB]
Get: 131 http://deb.debian.org/debian unstable/main arm64 libfreetype6 arm64 2.13.3+dfsg-1 [422 kB]
Get: 132 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-mono all 2.37-8 [489 kB]
Get: 133 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-core all 2.37-8 [840 kB]
Get: 134 http://deb.debian.org/debian unstable/main arm64 fontconfig-config arm64 2.15.0-2 [317 kB]
Get: 135 http://deb.debian.org/debian unstable/main arm64 libfontconfig1 arm64 2.15.0-2 [386 kB]
Get: 136 http://deb.debian.org/debian unstable/main arm64 libpixman-1-0 arm64 0.44.0-3 [168 kB]
Get: 137 http://deb.debian.org/debian unstable/main arm64 libxcb-render0 arm64 1.17.0-2+b1 [115 kB]
Get: 138 http://deb.debian.org/debian unstable/main arm64 libxcb-shm0 arm64 1.17.0-2+b1 [105 kB]
Get: 139 http://deb.debian.org/debian unstable/main arm64 libxrender1 arm64 1:0.9.10-1.1+b3 [27.2 kB]
Get: 140 http://deb.debian.org/debian unstable/main arm64 libcairo2 arm64 1.18.2-2 [483 kB]
Get: 141 http://deb.debian.org/debian unstable/main arm64 libcairo-gobject2 arm64 1.18.2-2 [130 kB]
Get: 142 http://deb.debian.org/debian unstable/main arm64 libcloudproviders0 arm64 0.3.6-1+b1 [27.7 kB]
Get: 143 http://deb.debian.org/debian unstable/main arm64 libcolord2 arm64 1.4.7-1+b2 [130 kB]
Get: 144 http://deb.debian.org/debian unstable/main arm64 libavahi-common-data arm64 0.8-16 [112 kB]
Get: 145 http://deb.debian.org/debian unstable/main arm64 libavahi-common3 arm64 0.8-16 [43.3 kB]
Get: 146 http://deb.debian.org/debian unstable/main arm64 libavahi-client3 arm64 0.8-16 [46.7 kB]
Get: 147 http://deb.debian.org/debian unstable/main arm64 libcups2t64 arm64 2.4.10-2+b1 [236 kB]
Get: 148 http://deb.debian.org/debian unstable/main arm64 libepoxy0 arm64 1.5.10-2 [200 kB]
Get: 149 http://deb.debian.org/debian unstable/main arm64 libfribidi0 arm64 1.0.16-1 [26.5 kB]
Get: 150 http://deb.debian.org/debian unstable/main arm64 libgraphite2-3 arm64 1.3.14-2+b1 [70.4 kB]
Get: 151 http://deb.debian.org/debian unstable/main arm64 libharfbuzz0b arm64 10.1.0-2 [443 kB]
Get: 152 http://deb.debian.org/debian unstable/main arm64 fontconfig arm64 2.15.0-2 [462 kB]
Get: 153 http://deb.debian.org/debian unstable/main arm64 libthai-data all 0.1.29-2 [168 kB]
Get: 154 http://deb.debian.org/debian unstable/main arm64 libdatrie1 arm64 0.2.13-3+b1 [37.6 kB]
Get: 155 http://deb.debian.org/debian unstable/main arm64 libthai0 arm64 0.1.29-2+b1 [48.4 kB]
Get: 156 http://deb.debian.org/debian unstable/main arm64 libpango-1.0-0 arm64 1.55.0+ds-3 [212 kB]
Get: 157 http://deb.debian.org/debian unstable/main arm64 libpangoft2-1.0-0 arm64 1.55.0+ds-3 [52.1 kB]
Get: 158 http://deb.debian.org/debian unstable/main arm64 libpangocairo-1.0-0 arm64 1.55.0+ds-3 [33.4 kB]
Get: 159 http://deb.debian.org/debian unstable/main arm64 libwayland-client0 arm64 1.23.0-1+b1 [26.0 kB]
Get: 160 http://deb.debian.org/debian unstable/main arm64 libwayland-cursor0 arm64 1.23.0-1+b1 [11.5 kB]
Get: 161 http://deb.debian.org/debian unstable/main arm64 libwayland-egl1 arm64 1.23.0-1+b1 [5768 B]
Get: 162 http://deb.debian.org/debian unstable/main arm64 libxcomposite1 arm64 1:0.4.6-1 [16.4 kB]
Get: 163 http://deb.debian.org/debian unstable/main arm64 libxfixes3 arm64 1:6.0.0-2+b3 [20.4 kB]
Get: 164 http://deb.debian.org/debian unstable/main arm64 libxcursor1 arm64 1:1.2.2-1+b1 [37.1 kB]
Get: 165 http://deb.debian.org/debian unstable/main arm64 libxdamage1 arm64 1:1.1.6-1+b2 [15.6 kB]
Get: 166 http://deb.debian.org/debian unstable/main arm64 libxinerama1 arm64 2:1.1.4-3+b3 [16.1 kB]
Get: 167 http://deb.debian.org/debian unstable/main arm64 xkb-data all 2.42-1 [790 kB]
Get: 168 http://deb.debian.org/debian unstable/main arm64 libxkbcommon0 arm64 1.7.0-2 [106 kB]
Get: 169 http://deb.debian.org/debian unstable/main arm64 libxrandr2 arm64 2:1.5.4-1+b2 [36.0 kB]
Get: 170 http://deb.debian.org/debian unstable/main arm64 libgtk-3-common all 3.24.43-4 [4657 kB]
Get: 171 http://deb.debian.org/debian unstable/main arm64 libgtk-3-0t64 arm64 3.24.43-4 [2546 kB]
Get: 172 http://deb.debian.org/debian unstable/main arm64 libglvnd0 arm64 1.7.0-1+b2 [41.6 kB]
Get: 173 http://deb.debian.org/debian unstable/main arm64 libdrm-common all 2.4.123-1 [8084 B]
Get: 174 http://deb.debian.org/debian unstable/main arm64 libdrm2 arm64 2.4.123-1 [38.0 kB]
Get: 175 http://deb.debian.org/debian unstable/main arm64 libglapi-mesa arm64 24.3.3-1 [47.9 kB]
Get: 176 http://deb.debian.org/debian unstable/main arm64 libx11-xcb1 arm64 2:1.8.10-2 [241 kB]
Get: 177 http://deb.debian.org/debian unstable/main arm64 libxcb-dri3-0 arm64 1.17.0-2+b1 [107 kB]
Get: 178 http://deb.debian.org/debian unstable/main arm64 libxcb-glx0 arm64 1.17.0-2+b1 [123 kB]
Get: 179 http://deb.debian.org/debian unstable/main arm64 libxcb-present0 arm64 1.17.0-2+b1 [106 kB]
Get: 180 http://deb.debian.org/debian unstable/main arm64 libxcb-xfixes0 arm64 1.17.0-2+b1 [110 kB]
Get: 181 http://deb.debian.org/debian unstable/main arm64 libxxf86vm1 arm64 1:1.1.4-1+b4 [19.2 kB]
Get: 182 http://deb.debian.org/debian unstable/main arm64 libdrm-amdgpu1 arm64 2.4.123-1 [21.6 kB]
Get: 183 http://deb.debian.org/debian unstable/main arm64 libdrm-radeon1 arm64 2.4.123-1 [21.3 kB]
Get: 184 http://deb.debian.org/debian unstable/main arm64 libedit2 arm64 3.1-20240808-1 [89.2 kB]
Get: 185 http://deb.debian.org/debian unstable/main arm64 libz3-4 arm64 4.13.3-1 [7507 kB]
Get: 186 http://deb.debian.org/debian unstable/main arm64 libllvm19 arm64 1:19.1.6-1+b1 [23.3 MB]
Get: 187 http://deb.debian.org/debian unstable/main arm64 libsensors-config all 1:3.6.0-10 [14.6 kB]
Get: 188 http://deb.debian.org/debian unstable/main arm64 libsensors5 arm64 1:3.6.0-10+b1 [34.3 kB]
Get: 189 http://deb.debian.org/debian unstable/main arm64 libxcb-randr0 arm64 1.17.0-2+b1 [117 kB]
Get: 190 http://deb.debian.org/debian unstable/main arm64 libxcb-sync1 arm64 1.17.0-2+b1 [109 kB]
Get: 191 http://deb.debian.org/debian unstable/main arm64 libxshmfence1 arm64 1.3-1+b3 [9104 B]
Get: 192 http://deb.debian.org/debian unstable/main arm64 mesa-libgallium arm64 24.3.3-1 [7904 kB]
Get: 193 http://deb.debian.org/debian unstable/main arm64 libvulkan1 arm64 1.3.296.0-1 [123 kB]
Get: 194 http://deb.debian.org/debian unstable/main arm64 libwayland-server0 arm64 1.23.0-1+b1 [33.4 kB]
Get: 195 http://deb.debian.org/debian unstable/main arm64 libgbm1 arm64 24.3.3-1 [42.9 kB]
Get: 196 http://deb.debian.org/debian unstable/main arm64 libgl1-mesa-dri arm64 24.3.3-1 [44.6 kB]
Get: 197 http://deb.debian.org/debian unstable/main arm64 libglx-mesa0 arm64 24.3.3-1 [142 kB]
Get: 198 http://deb.debian.org/debian unstable/main arm64 libglx0 arm64 1.7.0-1+b2 [31.1 kB]
Get: 199 http://deb.debian.org/debian unstable/main arm64 libgl1 arm64 1.7.0-1+b2 [90.9 kB]
Get: 200 http://deb.debian.org/debian unstable/main arm64 libasound2-data all 1.2.13-1 [21.1 kB]
Get: 201 http://deb.debian.org/debian unstable/main arm64 libasound2t64 arm64 1.2.13-1+b1 [338 kB]
Get: 202 http://deb.debian.org/debian unstable/main arm64 libgif7 arm64 5.2.2-1+b1 [44.2 kB]
Get: 203 http://deb.debian.org/debian unstable/main arm64 x11-common all 1:7.7+23.2 [216 kB]
Get: 204 http://deb.debian.org/debian unstable/main arm64 libxtst6 arm64 2:1.2.3-1.1+b3 [26.0 kB]
Get: 205 http://deb.debian.org/debian unstable/main arm64 openjdk-21-jre arm64 21.0.6~6ea-1 [193 kB]
Get: 206 http://deb.debian.org/debian unstable/main arm64 default-jre arm64 2:1.21-76 [1068 B]
Get: 207 http://deb.debian.org/debian unstable/main arm64 openjdk-21-jdk-headless arm64 21.0.6~6ea-1 [81.8 MB]
Get: 208 http://deb.debian.org/debian unstable/main arm64 default-jdk-headless arm64 2:1.21-76 [1124 B]
Get: 209 http://deb.debian.org/debian unstable/main arm64 openjdk-21-jdk arm64 21.0.6~6ea-1 [3435 kB]
Get: 210 http://deb.debian.org/debian unstable/main arm64 default-jdk arm64 2:1.21-76 [1076 B]
Get: 211 http://deb.debian.org/debian unstable/main arm64 libgpg-error0 arm64 1.51-3 [78.5 kB]
Get: 212 http://deb.debian.org/debian unstable/main arm64 libassuan9 arm64 3.0.1-2 [58.1 kB]
Get: 213 http://deb.debian.org/debian unstable/main arm64 libgcrypt20 arm64 1.11.0-7 [742 kB]
Get: 214 http://deb.debian.org/debian unstable/main arm64 gpgconf arm64 2.2.46-1 [115 kB]
Get: 215 http://deb.debian.org/debian unstable/main arm64 libksba8 arm64 1.6.7-2+b1 [125 kB]
Get: 216 http://deb.debian.org/debian unstable/main arm64 libnpth0t64 arm64 1.8-2 [22.8 kB]
Get: 217 http://deb.debian.org/debian unstable/main arm64 dirmngr arm64 2.2.46-1 [343 kB]
Get: 218 http://deb.debian.org/debian unstable/main arm64 gnupg-l10n all 2.2.46-1 [702 kB]
Get: 219 http://deb.debian.org/debian unstable/main arm64 gpg arm64 2.2.46-1 [482 kB]
Get: 220 http://deb.debian.org/debian unstable/main arm64 pinentry-curses arm64 1.3.1-2 [83.5 kB]
Get: 221 http://deb.debian.org/debian unstable/main arm64 gpg-agent arm64 2.2.46-1 [230 kB]
Get: 222 http://deb.debian.org/debian unstable/main arm64 gpgsm arm64 2.2.46-1 [232 kB]
Get: 223 http://deb.debian.org/debian unstable/main arm64 gnupg all 2.2.46-1 [376 kB]
Get: 224 http://deb.debian.org/debian unstable/main arm64 gpgv arm64 2.2.46-1 [200 kB]
Get: 225 http://deb.debian.org/debian unstable/main arm64 sopv-gpgv all 0.1.1-1 [10.7 kB]
Get: 226 http://deb.debian.org/debian unstable/main arm64 libfile-dirlist-perl all 0.05-3 [7600 B]
Get: 227 http://deb.debian.org/debian unstable/main arm64 libfile-which-perl all 1.27-2 [15.1 kB]
Get: 228 http://deb.debian.org/debian unstable/main arm64 libfile-homedir-perl all 1.006-2 [42.4 kB]
Get: 229 http://deb.debian.org/debian unstable/main arm64 libfile-touch-perl all 0.12-2 [8816 B]
Get: 230 http://deb.debian.org/debian unstable/main arm64 libio-pty-perl arm64 1:1.20-1+b2 [34.0 kB]
Get: 231 http://deb.debian.org/debian unstable/main arm64 libipc-run-perl all 20231003.0-2 [101 kB]
Get: 232 http://deb.debian.org/debian unstable/main arm64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB]
Get: 233 http://deb.debian.org/debian unstable/main arm64 libclass-xsaccessor-perl arm64 1.19-4+b4 [34.9 kB]
Get: 234 http://deb.debian.org/debian unstable/main arm64 libb-hooks-op-check-perl arm64 0.22-3+b2 [10.6 kB]
Get: 235 http://deb.debian.org/debian unstable/main arm64 libdynaloader-functions-perl all 0.004-1 [12.1 kB]
Get: 236 http://deb.debian.org/debian unstable/main arm64 libdevel-callchecker-perl arm64 0.009-1+b1 [16.3 kB]
Get: 237 http://deb.debian.org/debian unstable/main arm64 libparams-classify-perl arm64 0.015-2+b4 [22.3 kB]
Get: 238 http://deb.debian.org/debian unstable/main arm64 libmodule-runtime-perl all 0.016-2 [19.6 kB]
Get: 239 http://deb.debian.org/debian unstable/main arm64 libimport-into-perl all 1.002005-2 [11.3 kB]
Get: 240 http://deb.debian.org/debian unstable/main arm64 librole-tiny-perl all 2.002004-1 [21.4 kB]
Get: 241 http://deb.debian.org/debian unstable/main arm64 libsub-quote-perl all 2.006008-1 [21.8 kB]
Get: 242 http://deb.debian.org/debian unstable/main arm64 libmoo-perl all 2.005005-1 [58.0 kB]
Get: 243 http://deb.debian.org/debian unstable/main arm64 libencode-locale-perl all 1.05-3 [12.9 kB]
Get: 244 http://deb.debian.org/debian unstable/main arm64 libtimedate-perl all 2.3300-2 [39.3 kB]
Get: 245 http://deb.debian.org/debian unstable/main arm64 libhttp-date-perl all 6.06-1 [10.7 kB]
Get: 246 http://deb.debian.org/debian unstable/main arm64 libfile-listing-perl all 6.16-1 [12.4 kB]
Get: 247 http://deb.debian.org/debian unstable/main arm64 libhtml-tagset-perl all 3.24-1 [14.7 kB]
Get: 248 http://deb.debian.org/debian unstable/main arm64 liburi-perl all 5.30-1 [105 kB]
Get: 249 http://deb.debian.org/debian unstable/main arm64 libhtml-parser-perl arm64 3.83-1+b2 [97.5 kB]
Get: 250 http://deb.debian.org/debian unstable/main arm64 libhtml-tree-perl all 5.07-3 [211 kB]
Get: 251 http://deb.debian.org/debian unstable/main arm64 libclone-perl arm64 0.47-1+b1 [13.7 kB]
Get: 252 http://deb.debian.org/debian unstable/main arm64 libio-html-perl all 1.004-3 [16.2 kB]
Get: 253 http://deb.debian.org/debian unstable/main arm64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB]
Get: 254 http://deb.debian.org/debian unstable/main arm64 libhttp-message-perl all 7.00-2 [79.8 kB]
Get: 255 http://deb.debian.org/debian unstable/main arm64 libhttp-cookies-perl all 6.11-1 [19.1 kB]
Get: 256 http://deb.debian.org/debian unstable/main arm64 libhttp-negotiate-perl all 6.01-2 [13.1 kB]
Get: 257 http://deb.debian.org/debian unstable/main arm64 perl-openssl-defaults arm64 7+b2 [6712 B]
Get: 258 http://deb.debian.org/debian unstable/main arm64 libnet-ssleay-perl arm64 1.94-2 [323 kB]
Get: 259 http://deb.debian.org/debian unstable/main arm64 libio-socket-ssl-perl all 2.089-1 [223 kB]
Get: 260 http://deb.debian.org/debian unstable/main arm64 libnet-http-perl all 6.23-1 [23.9 kB]
Get: 261 http://deb.debian.org/debian unstable/main arm64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB]
Get: 262 http://deb.debian.org/debian unstable/main arm64 libtry-tiny-perl all 0.32-1 [22.9 kB]
Get: 263 http://deb.debian.org/debian unstable/main arm64 libwww-robotrules-perl all 6.02-1 [12.9 kB]
Get: 264 http://deb.debian.org/debian unstable/main arm64 libwww-perl all 6.77-1 [183 kB]
Get: 265 http://deb.debian.org/debian unstable/main arm64 patchutils arm64 0.4.2-1+b1 [71.3 kB]
Get: 266 http://deb.debian.org/debian unstable/main arm64 wdiff arm64 1.2.2-7 [121 kB]
Get: 267 http://deb.debian.org/debian unstable/main arm64 devscripts all 2.24.10 [1076 kB]
Get: 268 http://deb.debian.org/debian unstable/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB]
Get: 269 http://deb.debian.org/debian unstable/main arm64 python3-more-itertools all 10.5.0-1 [63.8 kB]
Get: 270 http://deb.debian.org/debian unstable/main arm64 python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get: 271 http://deb.debian.org/debian unstable/main arm64 python3-typeguard all 4.4.1-1 [37.0 kB]
Get: 272 http://deb.debian.org/debian unstable/main arm64 python3-inflect all 7.3.1-2 [32.4 kB]
Get: 273 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.context all 6.0.0-1 [7984 B]
Get: 274 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get: 275 http://deb.debian.org/debian unstable/main arm64 python3-pkg-resources all 75.6.0-1 [222 kB]
Get: 276 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB]
Get: 277 http://deb.debian.org/debian unstable/main arm64 python3-zipp all 3.21.0-1 [10.6 kB]
Get: 278 http://deb.debian.org/debian unstable/main arm64 python3-setuptools all 75.6.0-1 [720 kB]
Get: 279 http://deb.debian.org/debian unstable/main arm64 dh-python all 6.20250108 [113 kB]
Get: 280 http://deb.debian.org/debian unstable/main arm64 fastjar arm64 2:0.98-7+b1 [74.9 kB]
Get: 281 http://deb.debian.org/debian unstable/main arm64 hdf5-helpers arm64 1.14.5+repack-3 [26.6 kB]
Get: 282 http://deb.debian.org/debian unstable/main arm64 icu-devtools arm64 72.1-6 [196 kB]
Get: 283 http://deb.debian.org/debian unstable/main arm64 jarwrapper all 0.80 [9692 B]
Get: 284 http://deb.debian.org/debian unstable/main arm64 javahelper all 0.80 [80.4 kB]
Get: 285 http://deb.debian.org/debian unstable/main arm64 libgssrpc4t64 arm64 1.21.3-3 [56.7 kB]
Get: 286 http://deb.debian.org/debian unstable/main arm64 libkadm5clnt-mit12 arm64 1.21.3-3 [40.3 kB]
Get: 287 http://deb.debian.org/debian unstable/main arm64 libkdb5-10t64 arm64 1.21.3-3 [40.8 kB]
Get: 288 http://deb.debian.org/debian unstable/main arm64 libkadm5srv-mit12 arm64 1.21.3-3 [52.2 kB]
Get: 289 http://deb.debian.org/debian unstable/main arm64 krb5-multidev arm64 1.21.3-3 [126 kB]
Get: 290 http://deb.debian.org/debian unstable/main arm64 libabsl20230802 arm64 20230802.1-4 [432 kB]
Get: 291 http://deb.debian.org/debian unstable/main arm64 libabsl-dev arm64 20230802.1-4 [1193 kB]
Get: 292 http://deb.debian.org/debian unstable/main arm64 libaec0 arm64 1.1.3-1+b1 [22.5 kB]
Get: 293 http://deb.debian.org/debian unstable/main arm64 libsz2 arm64 1.1.3-1+b1 [8044 B]
Get: 294 http://deb.debian.org/debian unstable/main arm64 libaec-dev arm64 1.1.3-1+b1 [20.2 kB]
Get: 295 http://deb.debian.org/debian unstable/main arm64 libbrotli-dev arm64 1.1.0-2+b6 [308 kB]
Get: 296 http://deb.debian.org/debian unstable/main arm64 libbz2-dev arm64 1.0.8-6 [31.9 kB]
Get: 297 http://deb.debian.org/debian unstable/main arm64 libidn2-dev arm64 2.3.7-2+b1 [122 kB]
Get: 298 http://deb.debian.org/debian unstable/main arm64 libkrb5-dev arm64 1.21.3-3 [15.8 kB]
Get: 299 http://deb.debian.org/debian unstable/main arm64 libldap-dev arm64 2.5.19+dfsg-1 [300 kB]
Get: 300 http://deb.debian.org/debian unstable/main arm64 libpkgconf3 arm64 1.8.1-4 [35.3 kB]
Get: 301 http://deb.debian.org/debian unstable/main arm64 pkgconf-bin arm64 1.8.1-4 [29.6 kB]
Get: 302 http://deb.debian.org/debian unstable/main arm64 pkgconf arm64 1.8.1-4 [26.1 kB]
Get: 303 http://deb.debian.org/debian unstable/main arm64 libnghttp2-dev arm64 1.64.0-1 [112 kB]
Get: 304 http://deb.debian.org/debian unstable/main arm64 libpsl-dev arm64 0.21.2-1.1+b1 [77.9 kB]
Get: 305 http://deb.debian.org/debian unstable/main arm64 libgmpxx4ldbl arm64 2:6.3.0+dfsg-3 [329 kB]
Get: 306 http://deb.debian.org/debian unstable/main arm64 libgmp-dev arm64 2:6.3.0+dfsg-3 [621 kB]
Get: 307 http://deb.debian.org/debian unstable/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10+b1 [170 kB]
Get: 308 http://deb.debian.org/debian unstable/main arm64 libunbound8 arm64 1.22.0-1+b1 [553 kB]
Get: 309 http://deb.debian.org/debian unstable/main arm64 libgnutls-dane0t64 arm64 3.8.8-2 [446 kB]
Get: 310 http://deb.debian.org/debian unstable/main arm64 libgnutls-openssl27t64 arm64 3.8.8-2 [446 kB]
Get: 311 http://deb.debian.org/debian unstable/main arm64 libp11-kit-dev arm64 0.25.5-3 [208 kB]
Get: 312 http://deb.debian.org/debian unstable/main arm64 libtasn1-6-dev arm64 4.19.0-3+b3 [96.5 kB]
Get: 313 http://deb.debian.org/debian unstable/main arm64 nettle-dev arm64 3.10-1+b1 [1324 kB]
Get: 314 http://deb.debian.org/debian unstable/main arm64 libgnutls28-dev arm64 3.8.8-2 [1404 kB]
Get: 315 http://deb.debian.org/debian unstable/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB]
Get: 316 http://deb.debian.org/debian unstable/main arm64 librtmp-dev arm64 2.4+20151223.gitfa8646d.1-2+b5 [67.5 kB]
Get: 317 http://deb.debian.org/debian unstable/main arm64 libssl-dev arm64 3.4.0-2 [3234 kB]
Get: 318 http://deb.debian.org/debian unstable/main arm64 libssh2-1-dev arm64 1.11.1-1 [388 kB]
Get: 319 http://deb.debian.org/debian unstable/main arm64 libzstd-dev arm64 1.5.6+dfsg-2 [329 kB]
Get: 320 http://deb.debian.org/debian unstable/main arm64 libcurl4-openssl-dev arm64 8.11.1-1 [449 kB]
Get: 321 http://deb.debian.org/debian unstable/main arm64 libsepol-dev arm64 3.7-1 [354 kB]
Get: 322 http://deb.debian.org/debian unstable/main arm64 libpcre2-16-0 arm64 10.44-5 [230 kB]
Get: 323 http://deb.debian.org/debian unstable/main arm64 libpcre2-32-0 arm64 10.44-5 [220 kB]
Get: 324 http://deb.debian.org/debian unstable/main arm64 libpcre2-posix3 arm64 10.44-5 [60.5 kB]
Get: 325 http://deb.debian.org/debian unstable/main arm64 libpcre2-dev arm64 10.44-5 [704 kB]
Get: 326 http://deb.debian.org/debian unstable/main arm64 libselinux1-dev arm64 3.7-3+b1 [164 kB]
Get: 327 http://deb.debian.org/debian unstable/main arm64 libfuse-dev arm64 2.9.9-9 [1022 kB]
Get: 328 http://deb.debian.org/debian unstable/main arm64 libgfortran5 arm64 14.2.0-12 [361 kB]
Get: 329 http://deb.debian.org/debian unstable/main arm64 libhdf5-310 arm64 1.14.5+repack-3 [1155 kB]
Get: 330 http://deb.debian.org/debian unstable/main arm64 libhdf5-cpp-310 arm64 1.14.5+repack-3 [121 kB]
Get: 331 http://deb.debian.org/debian unstable/main arm64 libhdf5-fortran-310 arm64 1.14.5+repack-3 [110 kB]
Get: 332 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-310 arm64 1.14.5+repack-3 [66.1 kB]
Get: 333 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-fortran-310 arm64 1.14.5+repack-3 [42.1 kB]
Get: 334 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-cpp-310 arm64 1.14.5+repack-3 [24.4 kB]
Get: 335 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo-dev arm64 1:2.1.5-3+b1 [293 kB]
Get: 336 http://deb.debian.org/debian unstable/main arm64 libjpeg-dev arm64 1:2.1.5-3+b1 [72.2 kB]
Get: 337 http://deb.debian.org/debian unstable/main arm64 libhdf5-dev arm64 1.14.5+repack-3 [3225 kB]
Get: 338 http://deb.debian.org/debian unstable/main arm64 libicu-dev arm64 72.1-6 [10.3 MB]
Get: 339 http://deb.debian.org/debian unstable/main arm64 liblzma-dev arm64 5.6.3-1+b1 [312 kB]
Get: 340 http://deb.debian.org/debian unstable/main arm64 libmagic-dev arm64 1:5.45-3+b1 [115 kB]
Get: 341 http://deb.debian.org/debian unstable/main arm64 libmbedcrypto16 arm64 3.6.2-3 [341 kB]
Get: 342 http://deb.debian.org/debian unstable/main arm64 libmbedx509-7 arm64 3.6.2-3 [146 kB]
Get: 343 http://deb.debian.org/debian unstable/main arm64 libmbedtls21 arm64 3.6.2-3 [222 kB]
Get: 344 http://deb.debian.org/debian unstable/main arm64 ncbi-vdb-data all 3.0.9+dfsg-2 [74.0 kB]
Get: 345 http://deb.debian.org/debian unstable/main arm64 libncbi-vdb3 arm64 3.0.9+dfsg-2 [1110 kB]
Get: 346 http://deb.debian.org/debian unstable/main arm64 libncbi-wvdb3 arm64 3.0.9+dfsg-2 [1113 kB]
Get: 347 http://deb.debian.org/debian unstable/main arm64 libncbi-wvdb-dev arm64 3.0.9+dfsg-2 [1284 kB]
Get: 348 http://deb.debian.org/debian unstable/main arm64 libncbi-vdb-dev arm64 3.0.9+dfsg-2 [1587 kB]
Get: 349 http://deb.debian.org/debian unstable/main arm64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB]
Get: 350 http://deb.debian.org/debian unstable/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.3+b1 [78.7 kB]
Get: 351 http://deb.debian.org/debian unstable/main arm64 libnsl2 arm64 1.3.0-3+b3 [37.9 kB]
Get: 352 http://deb.debian.org/debian unstable/main arm64 libpython3.12-stdlib arm64 3.12.8-4 [1908 kB]
Get: 353 http://deb.debian.org/debian unstable/main arm64 libre2-11 arm64 20240501-3+b1 [169 kB]
Get: 354 http://deb.debian.org/debian unstable/main arm64 libre2-dev arm64 20240501-3+b1 [237 kB]
Get: 355 http://deb.debian.org/debian unstable/main arm64 libsam-extract3 arm64 3.0.9+dfsg-2 [41.2 kB]
Get: 356 http://deb.debian.org/debian unstable/main arm64 libsam-extract-dev arm64 3.0.9+dfsg-2 [45.0 kB]
Get: 357 http://deb.debian.org/debian unstable/main arm64 libxml2-dev arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [751 kB]
Get: 358 http://deb.debian.org/debian unstable/main arm64 maven-repo-helper all 1.11 [142 kB]
Get: 359 http://deb.debian.org/debian unstable/main arm64 python3.12 arm64 3.12.8-4 [677 kB]
Get: 360 http://deb.debian.org/debian unstable/main arm64 python3-all arm64 3.13.1-2 [1056 B]
Fetched 297 MB in 1s (270 MB/s)
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Selecting previously unselected package libsystemd-shared:arm64.
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Unpacking libsystemd-shared:arm64 (257.2-1) ...
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Unpacking systemd (257.2-1) ...
Setting up libapparmor1:arm64 (3.1.7-1+b3) ...
Setting up libsystemd-shared:arm64 (257.2-1) ...
Setting up systemd (257.2-1) ...
Created symlink '/etc/systemd/system/getty.target.wants/getty@tty1.service' -> '/usr/lib/systemd/system/getty@.service'.

Created symlink '/etc/systemd/system/multi-user.target.wants/remote-fs.target' -> '/usr/lib/systemd/system/remote-fs.target'.

Created symlink '/etc/systemd/system/sysinit.target.wants/systemd-pstore.service' -> '/usr/lib/systemd/system/systemd-pstore.service'.

Initializing machine ID from random generator.

Creating group 'systemd-journal' with GID 999.

Creating group 'systemd-network' with GID 998.

Creating user 'systemd-network' (systemd Network Management) with UID 998 and GID 998.

/usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring.

Selecting previously unselected package systemd-sysv.
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Unpacking dbus-session-bus-common (1.16.0-1) ...
Selecting previously unselected package libexpat1:arm64.
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Unpacking dbus-daemon (1.16.0-1) ...
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Unpacking dbus-system-bus-common (1.16.0-1) ...
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Unpacking dbus (1.16.0-1) ...
Selecting previously unselected package libpipeline1:arm64.
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Unpacking libpipeline1:arm64 (1.5.8-1) ...
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Unpacking binfmt-support (2.2.2-7+b1) ...
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Unpacking m4 (1.4.19-5) ...
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Unpacking flex (2.6.4-8.2+b4) ...
Selecting previously unselected package libpython3.13-minimal:arm64.
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Unpacking libpython3.13-minimal:arm64 (3.13.1-3) ...
Selecting previously unselected package python3.13-minimal.
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Unpacking python3.13-minimal (3.13.1-3) ...
Setting up libpython3.13-minimal:arm64 (3.13.1-3) ...
Setting up libexpat1:arm64 (2.6.4-1) ...
Setting up python3.13-minimal (3.13.1-3) ...
Selecting previously unselected package python3-minimal.
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Unpacking readline-common (8.2-6) ...
Selecting previously unselected package libreadline8t64:arm64.
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Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
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Selecting previously unselected package libpython3.12-minimal:arm64.
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Unpacking python3.12-minimal (3.12.8-4) ...
Selecting previously unselected package libproc2-0:arm64.
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Unpacking libproc2-0:arm64 (2:4.0.4-6) ...
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Unpacking procps (2:4.0.4-6) ...
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Unpacking sensible-utils (0.0.24) ...
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Setting up x11-common (1:7.7+23.2) ...
Running in chroot, ignoring request.

Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix.
Setting up libtry-tiny-perl (0.32-1) ...
Setting up libsensors-config (1:3.6.0-10) ...
Setting up libnghttp2-14:arm64 (1.64.0-1) ...
Setting up libdeflate0:arm64 (1.22-1) ...
Setting up perl-openssl-defaults:arm64 (7+b2) ...
Setting up gettext-base (0.22.5-4) ...
Setting up m4 (1.4.19-5) ...
Setting up libevent-2.1-7t64:arm64 (2.1.12-stable-10+b1) ...
Setting up libgcrypt20:arm64 (1.11.0-7) ...
Setting up xkb-data (2.42-1) ...
Setting up libencode-locale-perl (1.05-3) ...
Setting up libxcb-shm0:arm64 (1.17.0-2+b1) ...
Setting up libcom-err2:arm64 (1.47.2-1) ...
Setting up file (1:5.45-3+b1) ...
Setting up libmagic-dev:arm64 (1:5.45-3+b1) ...
Setting up libjbig0:arm64 (2.1-6.1+b2) ...
Setting up libpcre2-16-0:arm64 (10.44-5) ...
Setting up libaec0:arm64 (1.1.3-1+b1) ...
Setting up libelf1t64:arm64 (0.192-4) ...
Setting up libkrb5support0:arm64 (1.21.3-3) ...
Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-8) ...
Setting up tzdata (2024b-5) ...

Current default time zone: 'Etc/UTC'
Local time is now:      Fri Feb 13 16:48:13 UTC 2026.
Universal Time is now:  Fri Feb 13 16:48:13 UTC 2026.
Run 'dpkg-reconfigure tzdata' if you wish to change it.

Setting up libxcb-present0:arm64 (1.17.0-2+b1) ...
Setting up libasound2-data (1.2.13-1) ...
Setting up autotools-dev (20220109.1) ...
Setting up libz3-4:arm64 (4.13.3-1) ...
Setting up libpcre2-32-0:arm64 (10.44-5) ...
Setting up libunbound8:arm64 (1.22.0-1+b1) ...
Setting up libpkgconf3:arm64 (1.8.1-4) ...
Setting up libgmpxx4ldbl:arm64 (2:6.3.0+dfsg-3) ...
Setting up libasound2t64:arm64 (1.2.13-1+b1) ...
Setting up libjpeg62-turbo:arm64 (1:2.1.5-3+b1) ...
Setting up libx11-data (2:1.8.10-2) ...
Setting up libjpeg62-turbo-dev:arm64 (1:2.1.5-3+b1) ...
Setting up libepoxy0:arm64 (1.5.10-2) ...
Setting up libnspr4:arm64 (2:4.36-1) ...
Setting up gnupg-l10n (2.2.46-1) ...
Setting up libxcb-sync1:arm64 (1.17.0-2+b1) ...
Setting up libjsoncpp26:arm64 (1.9.6-3) ...
Setting up libavahi-common-data:arm64 (0.8-16) ...
Setting up libdbus-1-3:arm64 (1.16.0-1) ...
Setting up libfribidi0:arm64 (1.0.16-1) ...
Setting up libproc2-0:arm64 (2:4.0.4-6) ...
Setting up comerr-dev:arm64 (2.1-1.47.2-1) ...
Setting up libunistring5:arm64 (1.3-1) ...
Setting up fonts-dejavu-mono (2.37-8) ...
Setting up libssl-dev:arm64 (3.4.0-2) ...
Setting up libpng16-16t64:arm64 (1.6.45-1) ...
Setting up libio-html-perl (1.004-3) ...
Setting up autopoint (0.22.5-4) ...
Setting up binfmt-support (2.2.2-7+b1) ...
Running in chroot, ignoring request.

invoke-rc.d: policy-rc.d denied execution of start.
Created symlink '/etc/systemd/system/multi-user.target.wants/binfmt-support.service' -> '/usr/lib/systemd/system/binfmt-support.service'.

Setting up libb-hooks-op-check-perl:arm64 (0.22-3+b2) ...
Setting up icu-devtools (72.1-6) ...
Setting up fonts-dejavu-core (2.37-8) ...
Setting up d-shlibs (0.109) ...
Setting up libipc-run-perl (20231003.0-2) ...
Setting up libsepol-dev:arm64 (3.7-1) ...
Setting up libpcsclite1:arm64 (2.3.1-1) ...
Setting up pkgconf-bin (1.8.1-4) ...
Setting up libsensors5:arm64 (1:3.6.0-10+b1) ...
Setting up libk5crypto3:arm64 (1.21.3-3) ...
Setting up libglapi-mesa:arm64 (24.3.3-1) ...
Setting up libsasl2-2:arm64 (2.1.28+dfsg1-8) ...
Setting up libgfortran5:arm64 (14.2.0-12) ...
Setting up libvulkan1:arm64 (1.3.296.0-1) ...
Setting up autoconf (2.72-3) ...
Setting up libwebp7:arm64 (1.5.0-0.1) ...
Setting up libtimedate-perl (2.3300-2) ...
Setting up liblzma-dev:arm64 (5.6.3-1+b1) ...
Setting up libgif7:arm64 (5.2.2-1+b1) ...
Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1+b1) ...
Setting up libffi8:arm64 (3.4.6-1) ...
Setting up libpcre2-posix3:arm64 (10.44-5) ...
Setting up dwz (0.15-1+b1) ...
Setting up sensible-utils (0.0.24) ...
Setting up libxshmfence1:arm64 (1.3-1+b3) ...
Setting up at-spi2-common (2.54.0-1) ...
Setting up gpgv (2.2.46-1) ...
Setting up libtiff6:arm64 (4.5.1+git230720-5) ...
Setting up libxcb-randr0:arm64 (1.17.0-2+b1) ...
Setting up dbus-session-bus-common (1.16.0-1) ...
Setting up libuchardet0:arm64 (0.0.8-1+b2) ...
Setting up libassuan9:arm64 (3.0.1-2) ...
Setting up procps (2:4.0.4-6) ...
Setting up bison (2:3.8.2+dfsg-1+b2) ...
update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode
Setting up librole-tiny-perl (2.002004-1) ...
Setting up libtasn1-6:arm64 (4.19.0-3+b3) ...
Setting up libx11-6:arm64 (2:1.8.10-2) ...
Setting up ncbi-vdb-data (3.0.9+dfsg-2) ...
Setting up libthai-data (0.1.29-2) ...
Setting up netbase (6.4) ...
Setting up libabsl20230802:arm64 (20230802.1-4) ...
Setting up libsub-quote-perl (2.006008-1) ...
Setting up libclass-xsaccessor-perl (1.19-4+b4) ...
Setting up libsam-extract3:arm64 (3.0.9+dfsg-2) ...
Setting up cmake-data (3.31.3-1) ...
Setting up librhash1:arm64 (1.4.5-1) ...
Setting up libkrb5-3:arm64 (1.21.3-3) ...
Setting up libwayland-egl1:arm64 (1.23.0-1+b1) ...
Setting up libmbedcrypto16:arm64 (3.6.2-3) ...
Setting up libssh2-1t64:arm64 (1.11.1-1) ...
Setting up libfile-dirlist-perl (0.05-3) ...
Setting up dbus-system-bus-common (1.16.0-1) ...
useradd: Warning: missing or non-executable shell '/usr/sbin/nologin'
Setting up libfile-homedir-perl (1.006-2) ...
Setting up libtasn1-6-dev:arm64 (4.19.0-3+b3) ...
Setting up openssl (3.4.0-2) ...
Setting up libdrm-common (2.4.123-1) ...
Setting up libxcomposite1:arm64 (1:0.4.6-1) ...
Setting up readline-common (8.2-6) ...
Setting up libicu-dev:arm64 (72.1-6) ...
Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ...
Setting up liburi-perl (5.30-1) ...
Setting up dbus-bin (1.16.0-1) ...
Setting up libsam-extract-dev:arm64 (3.0.9+dfsg-2) ...
Setting up libbrotli-dev:arm64 (1.1.0-2+b6) ...
Setting up libfile-touch-perl (0.12-2) ...
Setting up libsz2:arm64 (1.1.3-1+b1) ...
Setting up dctrl-tools (2.24-3+b1) ...
Setting up libbz2-dev:arm64 (1.0.8-6) ...
Setting up libxkbcommon0:arm64 (1.7.0-2) ...
Setting up libwayland-client0:arm64 (1.23.0-1+b1) ...
Setting up libnet-ssleay-perl:arm64 (1.94-2) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libksba8:arm64 (1.6.7-2+b1) ...
Setting up pinentry-curses (1.3.1-2) ...
Setting up libfile-stripnondeterminism-perl (1.14.0-1) ...
Setting up libxcb-dri3-0:arm64 (1.17.0-2+b1) ...
Setting up python3.12-minimal (3.12.8-4) ...
Setting up libllvm19:arm64 (1:19.1.6-1+b1) ...
Setting up libwayland-server0:arm64 (1.23.0-1+b1) ...
Setting up libx11-xcb1:arm64 (2:1.8.10-2) ...
Setting up libhttp-date-perl (6.06-1) ...
Setting up libre2-11:arm64 (20240501-3+b1) ...
Setting up flex (2.6.4-8.2+b4) ...
Setting up gettext (0.22.5-4) ...
Setting up libxdamage1:arm64 (1:1.1.6-1+b2) ...
Setting up libgmp-dev:arm64 (2:6.3.0+dfsg-3) ...
Setting up libfile-listing-perl (6.16-1) ...
Setting up libpcre2-dev:arm64 (10.44-5) ...
Setting up nettle-dev:arm64 (3.10-1+b1) ...
Setting up libxrender1:arm64 (1:0.9.10-1.1+b3) ...
Setting up jarwrapper (0.80) ...
Setting up libtool (2.5.4-2) ...
Setting up libselinux1-dev:arm64 (3.7-3+b1) ...
Setting up fontconfig-config (2.15.0-2) ...
Setting up libaec-dev:arm64 (1.1.3-1+b1) ...
Setting up libavahi-common3:arm64 (0.8-16) ...
Setting up libjpeg-dev:arm64 (1:2.1.5-3+b1) ...
Setting up libxext6:arm64 (2:1.3.4-1+b3) ...
Setting up libnet-http-perl (6.23-1) ...
Setting up libidn2-0:arm64 (2.3.7-2+b1) ...
Setting up libnss3:arm64 (2:3.107-1) ...
Setting up dbus-daemon (1.16.0-1) ...
Setting up libfuse-dev:arm64 (2.9.9-9) ...
Setting up libdevel-callchecker-perl:arm64 (0.009-1+b1) ...
Setting up pkgconf:arm64 (1.8.1-4) ...
Setting up libxxf86vm1:arm64 (1:1.1.4-1+b4) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up dh-autoreconf (20) ...
Setting up patchutils (0.4.2-1+b1) ...
Setting up libthai0:arm64 (0.1.29-2+b1) ...
Setting up ca-certificates (20241223) ...
Updating certificates in /etc/ssl/certs...
152 added, 0 removed; done.
Setting up libxml2-dev:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ...
Setting up libglib2.0-0t64:arm64 (2.82.4-1) ...
Setting up libmbedx509-7:arm64 (3.6.2-3) ...
Setting up libfreetype6:arm64 (2.13.3+dfsg-1) ...
Setting up libxfixes3:arm64 (1:6.0.0-2+b3) ...
Setting up dbus (1.16.0-1) ...
Running in chroot, ignoring request.

invoke-rc.d: policy-rc.d denied execution of start.
Setting up shared-mime-info (2.4-5+b1) ...
Setting up libp11-kit0:arm64 (0.25.5-3) ...
Setting up libxinerama1:arm64 (2:1.1.4-3+b3) ...
Setting up libgssapi-krb5-2:arm64 (1.21.3-3) ...
Setting up libxrandr2:arm64 (2:1.5.4-1+b2) ...
Setting up libssh2-1-dev:arm64 (1.11.1-1) ...
Setting up libabsl-dev:arm64 (20230802.1-4) ...
Setting up libidn2-dev:arm64 (2.3.7-2+b1) ...
Setting up libmbedtls21:arm64 (3.6.2-3) ...
Setting up libreadline8t64:arm64 (8.2-6) ...
Setting up dh-strip-nondeterminism (1.14.0-1) ...
Setting up libwww-robotrules-perl (6.02-1) ...
Setting up libdrm2:arm64 (2.4.123-1) ...
Setting up groff-base (1.23.0-7) ...
Setting up libwayland-cursor0:arm64 (1.23.0-1+b1) ...
Setting up libhtml-parser-perl:arm64 (3.83-1+b2) ...
Setting up gpgconf (2.2.46-1) ...
Setting up libpam-systemd:arm64 (257.2-1) ...
Setting up libharfbuzz0b:arm64 (10.1.0-2) ...
Setting up libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-1+b1) ...
Setting up libfontconfig1:arm64 (2.15.0-2) ...
Setting up ca-certificates-java (20240118) ...
No JRE found. Skipping Java certificates setup.
Setting up libre2-dev:arm64 (20240501-3+b1) ...
Setting up libarchive13t64:arm64 (3.7.4-1.1) ...
Setting up libpython3.13-stdlib:arm64 (3.13.1-3) ...
Setting up libavahi-client3:arm64 (0.8-16) ...
Setting up libio-socket-ssl-perl (2.089-1) ...
Setting up gpg (2.2.46-1) ...
Setting up libp11-kit-dev:arm64 (0.25.5-3) ...
Setting up libpython3-stdlib:arm64 (3.13.1-2) ...
Setting up libhttp-message-perl (7.00-2) ...
Setting up libdrm-amdgpu1:arm64 (2.4.123-1) ...
Setting up libgnutls30t64:arm64 (3.8.8-2) ...
Setting up libgnutls-openssl27t64:arm64 (3.8.8-2) ...
Setting up gtk-update-icon-cache (4.16.12+ds-1) ...
Setting up libnghttp2-dev:arm64 (1.64.0-1) ...
Setting up libhttp-negotiate-perl (6.01-2) ...
Setting up fontconfig (2.15.0-2) ...
Regenerating fonts cache... done.
Setting up gpg-agent (2.2.46-1) ...
Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent-browser.socket' -> '/usr/lib/systemd/user/gpg-agent-browser.socket'.

Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent-extra.socket' -> '/usr/lib/systemd/user/gpg-agent-extra.socket'.

Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent-ssh.socket' -> '/usr/lib/systemd/user/gpg-agent-ssh.socket'.

Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent.socket' -> '/usr/lib/systemd/user/gpg-agent.socket'.

Setting up libatk1.0-0t64:arm64 (2.54.0-1) ...
Setting up openjdk-21-jre-headless:arm64 (21.0.6~6ea-1) ...
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/java to provide /usr/bin/java (java) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode
Setting up libxi6:arm64 (2:1.8.2-1) ...
Setting up libtirpc3t64:arm64 (1.3.4+ds-1.3+b1) ...
Setting up libhttp-cookies-perl (6.11-1) ...
Setting up python3.13 (3.13.1-3) ...
Setting up libdrm-radeon1:arm64 (2.4.123-1) ...
Setting up libxtst6:arm64 (2:1.2.3-1.1+b3) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libhtml-tree-perl (5.07-3) ...
Setting up libxcursor1:arm64 (1:1.2.2-1+b1) ...
Setting up libparams-classify-perl:arm64 (0.015-2+b4) ...
Setting up gpgsm (2.2.46-1) ...
Setting up libpango-1.0-0:arm64 (1.55.0+ds-3) ...
Setting up libpsl5t64:arm64 (0.21.2-1.1+b1) ...
Setting up libncbi-vdb3:arm64 (3.0.9+dfsg-2) ...
Setting up libcloudproviders0:arm64 (0.3.6-1+b1) ...
Setting up python3 (3.13.1-2) ...
Setting up sopv-gpgv (0.1.1-1) ...
update-alternatives: using /usr/bin/sopv-gpgv to provide /usr/bin/sopv (sopv) in auto mode
Setting up python3-zipp (3.21.0-1) ...
Setting up python3-autocommand (2.2.2-3) ...
Setting up man-db (2.13.0-1) ...
Not building database; man-db/auto-update is not 'true'.
Created symlink '/etc/systemd/system/timers.target.wants/man-db.timer' -> '/usr/lib/systemd/system/man-db.timer'.

Setting up libcairo2:arm64 (1.18.2-2) ...
Setting up libldap-2.5-0:arm64 (2.5.19+dfsg-1) ...
Setting up libcolord2:arm64 (1.4.7-1+b2) ...
Setting up libpsl-dev:arm64 (0.21.2-1.1+b1) ...
Setting up libdconf1:arm64 (0.40.0-4+b3) ...
Setting up dirmngr (2.2.46-1) ...
Created symlink '/etc/systemd/user/sockets.target.wants/dirmngr.socket' -> '/usr/lib/systemd/user/dirmngr.socket'.

Setting up dbus-user-session (1.16.0-1) ...
Setting up libgnutls-dane0t64:arm64 (3.8.8-2) ...
Setting up adwaita-icon-theme (47.0-2) ...
update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode
Setting up libmodule-runtime-perl (0.016-2) ...
Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ...
Setting up libgssrpc4t64:arm64 (1.21.3-3) ...
Setting up libldap-dev:arm64 (2.5.19+dfsg-1) ...
Setting up libatspi2.0-0t64:arm64 (2.54.0-1) ...
Setting up libncbi-wvdb3:arm64 (3.0.9+dfsg-2) ...
Setting up python3-typing-extensions (4.12.2-2) ...
Setting up libnsl2:arm64 (1.3.0-3+b3) ...
Setting up gnupg (2.2.46-1) ...
Setting up libcairo-gobject2:arm64 (1.18.2-2) ...
Setting up libncbi-wvdb-dev:arm64 (3.0.9+dfsg-2) ...
Setting up libpangoft2-1.0-0:arm64 (1.55.0+ds-3) ...
Setting up libcups2t64:arm64 (2.4.10-2+b1) ...
Setting up libpangocairo-1.0-0:arm64 (1.55.0+ds-3) ...
Setting up libkadm5clnt-mit12:arm64 (1.21.3-3) ...
Setting up libgnutls28-dev:arm64 (3.8.8-2) ...
Setting up libatk-bridge2.0-0t64:arm64 (2.54.0-1) ...
Setting up python3-more-itertools (10.5.0-1) ...
Setting up mesa-libgallium:arm64 (24.3.3-1) ...
Setting up python3-jaraco.functools (4.1.0-1) ...
Setting up libpython3.12-stdlib:arm64 (3.12.8-4) ...
Setting up python3-jaraco.context (6.0.0-1) ...
Setting up libcurl4t64:arm64 (8.11.1-1) ...
Setting up libkdb5-10t64:arm64 (1.21.3-3) ...
Setting up libgbm1:arm64 (24.3.3-1) ...
Setting up libimport-into-perl (1.002005-2) ...
Setting up libmoo-perl (2.005005-1) ...
Setting up python3.12 (3.12.8-4) ...
Setting up python3-typeguard (4.4.1-1) ...
Setting up libgl1-mesa-dri:arm64 (24.3.3-1) ...
Setting up python3-all (3.13.1-2) ...
Setting up debhelper (13.23) ...
Setting up dconf-service (0.40.0-4+b3) ...
Setting up python3-inflect (7.3.1-2) ...
Setting up python3-jaraco.text (4.0.0-1) ...
Setting up librtmp-dev:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ...
Setting up libhdf5-310:arm64 (1.14.5+repack-3) ...
Setting up libkadm5srv-mit12:arm64 (1.21.3-3) ...
Setting up cmake (3.31.3-1) ...
Setting up libncbi-vdb-dev:arm64 (3.0.9+dfsg-2) ...
Setting up libhdf5-fortran-310:arm64 (1.14.5+repack-3) ...
Setting up krb5-multidev:arm64 (1.21.3-3) ...
Setting up libhdf5-cpp-310:arm64 (1.14.5+repack-3) ...
Setting up python3-pkg-resources (75.6.0-1) ...
Setting up libhdf5-hl-310:arm64 (1.14.5+repack-3) ...
Setting up libglx-mesa0:arm64 (24.3.3-1) ...
Setting up python3-setuptools (75.6.0-1) ...
Setting up libglx0:arm64 (1.7.0-1+b2) ...
Setting up dconf-gsettings-backend:arm64 (0.40.0-4+b3) ...
Setting up libkrb5-dev:arm64 (1.21.3-3) ...
Setting up libgl1:arm64 (1.7.0-1+b2) ...
Setting up libcurl4-openssl-dev:arm64 (8.11.1-1) ...
Setting up libgtk-3-common (3.24.43-4) ...
Setting up dh-python (6.20250108) ...
Setting up libhdf5-hl-cpp-310:arm64 (1.14.5+repack-3) ...
Setting up libhdf5-hl-fortran-310:arm64 (1.14.5+repack-3) ...
Setting up libgtk-3-0t64:arm64 (3.24.43-4) ...
Setting up libhdf5-dev (1.14.5+repack-3) ...
update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
Setting up liblwp-protocol-https-perl (6.14-1) ...
Setting up libwww-perl (6.77-1) ...
Setting up devscripts (2.24.10) ...
Setting up javahelper (0.80) ...
Processing triggers for libc-bin (2.40-5) ...
Processing triggers for systemd (257.2-1) ...
Processing triggers for ca-certificates-java (20240118) ...
Adding debian:ACCVRAIZ1.pem
Adding debian:AC_RAIZ_FNMT-RCM.pem
Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem
Adding debian:ANF_Secure_Server_Root_CA.pem
Adding debian:Actalis_Authentication_Root_CA.pem
Adding debian:AffirmTrust_Commercial.pem
Adding debian:AffirmTrust_Networking.pem
Adding debian:AffirmTrust_Premium.pem
Adding debian:AffirmTrust_Premium_ECC.pem
Adding debian:Amazon_Root_CA_1.pem
Adding debian:Amazon_Root_CA_2.pem
Adding debian:Amazon_Root_CA_3.pem
Adding debian:Amazon_Root_CA_4.pem
Adding debian:Atos_TrustedRoot_2011.pem
Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem
Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem
Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
Adding debian:BJCA_Global_Root_CA1.pem
Adding debian:BJCA_Global_Root_CA2.pem
Adding debian:Baltimore_CyberTrust_Root.pem
Adding debian:Buypass_Class_2_Root_CA.pem
Adding debian:Buypass_Class_3_Root_CA.pem
Adding debian:CA_Disig_Root_R2.pem
Adding debian:CFCA_EV_ROOT.pem
Adding debian:COMODO_Certification_Authority.pem
Adding debian:COMODO_ECC_Certification_Authority.pem
Adding debian:COMODO_RSA_Certification_Authority.pem
Adding debian:Certainly_Root_E1.pem
Adding debian:Certainly_Root_R1.pem
Adding debian:Certigna.pem
Adding debian:Certigna_Root_CA.pem
Adding debian:Certum_EC-384_CA.pem
Adding debian:Certum_Trusted_Network_CA.pem
Adding debian:Certum_Trusted_Network_CA_2.pem
Adding debian:Certum_Trusted_Root_CA.pem
Adding debian:CommScope_Public_Trust_ECC_Root-01.pem
Adding debian:CommScope_Public_Trust_ECC_Root-02.pem
Adding debian:CommScope_Public_Trust_RSA_Root-01.pem
Adding debian:CommScope_Public_Trust_RSA_Root-02.pem
Adding debian:Comodo_AAA_Services_root.pem
Adding debian:D-TRUST_BR_Root_CA_1_2020.pem
Adding debian:D-TRUST_EV_Root_CA_1_2020.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
Adding debian:DigiCert_Assured_ID_Root_CA.pem
Adding debian:DigiCert_Assured_ID_Root_G2.pem
Adding debian:DigiCert_Assured_ID_Root_G3.pem
Adding debian:DigiCert_Global_Root_CA.pem
Adding debian:DigiCert_Global_Root_G2.pem
Adding debian:DigiCert_Global_Root_G3.pem
Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem
Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem
Adding debian:DigiCert_Trusted_Root_G4.pem
Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
Adding debian:Entrust_Root_Certification_Authority.pem
Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem
Adding debian:Entrust_Root_Certification_Authority_-_G2.pem
Adding debian:Entrust_Root_Certification_Authority_-_G4.pem
Adding debian:FIRMAPROFESIONAL_CA_ROOT-A_WEB.pem
Adding debian:GDCA_TrustAUTH_R5_ROOT.pem
Adding debian:GLOBALTRUST_2020.pem
Adding debian:GTS_Root_R1.pem
Adding debian:GTS_Root_R2.pem
Adding debian:GTS_Root_R3.pem
Adding debian:GTS_Root_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem
Adding debian:GlobalSign_Root_CA.pem
Adding debian:GlobalSign_Root_CA_-_R3.pem
Adding debian:GlobalSign_Root_CA_-_R6.pem
Adding debian:GlobalSign_Root_E46.pem
Adding debian:GlobalSign_Root_R46.pem
Adding debian:Go_Daddy_Class_2_CA.pem
Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem
Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem
Adding debian:HiPKI_Root_CA_-_G1.pem
Adding debian:Hongkong_Post_Root_CA_3.pem
Adding debian:ISRG_Root_X1.pem
Adding debian:ISRG_Root_X2.pem
Adding debian:IdenTrust_Commercial_Root_CA_1.pem
Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem
Adding debian:Izenpe.com.pem
Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem
Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem
Adding debian:NAVER_Global_Root_Certification_Authority.pem
Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem
Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem
Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem
Adding debian:QuoVadis_Root_CA_1_G3.pem
Adding debian:QuoVadis_Root_CA_2.pem
Adding debian:QuoVadis_Root_CA_2_G3.pem
Adding debian:QuoVadis_Root_CA_3.pem
Adding debian:QuoVadis_Root_CA_3_G3.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem
Adding debian:SSL.com_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_Root_Certification_Authority_RSA.pem
Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem
Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem
Adding debian:SZAFIR_ROOT_CA2.pem
Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem
Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem
Adding debian:SecureSign_RootCA11.pem
Adding debian:SecureSign_Root_CA12.pem
Adding debian:SecureSign_Root_CA14.pem
Adding debian:SecureSign_Root_CA15.pem
Adding debian:SecureTrust_CA.pem
Adding debian:Secure_Global_CA.pem
Adding debian:Security_Communication_ECC_RootCA1.pem
Adding debian:Security_Communication_RootCA2.pem
Adding debian:Security_Communication_RootCA3.pem
Adding debian:Starfield_Class_2_CA.pem
Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
Adding debian:SwissSign_Gold_CA_-_G2.pem
Adding debian:SwissSign_Silver_CA_-_G2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem
Adding debian:TWCA_CYBER_Root_CA.pem
Adding debian:TWCA_Global_Root_CA.pem
Adding debian:TWCA_Root_Certification_Authority.pem
Adding debian:Telekom_Security_TLS_ECC_Root_2020.pem
Adding debian:Telekom_Security_TLS_RSA_Root_2023.pem
Adding debian:TeliaSonera_Root_CA_v1.pem
Adding debian:Telia_Root_CA_v2.pem
Adding debian:TrustAsia_Global_Root_CA_G3.pem
Adding debian:TrustAsia_Global_Root_CA_G4.pem
Adding debian:Trustwave_Global_Certification_Authority.pem
Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem
Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem
Adding debian:TunTrust_Root_CA.pem
Adding debian:UCA_Extended_Validation_Root.pem
Adding debian:UCA_Global_G2_Root.pem
Adding debian:USERTrust_ECC_Certification_Authority.pem
Adding debian:USERTrust_RSA_Certification_Authority.pem
Adding debian:XRamp_Global_CA_Root.pem
Adding debian:certSIGN_ROOT_CA.pem
Adding debian:certSIGN_Root_CA_G2.pem
Adding debian:e-Szigno_Root_CA_2017.pem
Adding debian:ePKI_Root_Certification_Authority.pem
Adding debian:emSign_ECC_Root_CA_-_C3.pem
Adding debian:emSign_ECC_Root_CA_-_G3.pem
Adding debian:emSign_Root_CA_-_C1.pem
Adding debian:emSign_Root_CA_-_G1.pem
Adding debian:vTrus_ECC_Root_CA.pem
Adding debian:vTrus_Root_CA.pem
done.
Setting up openjdk-21-jre:arm64 (21.0.6~6ea-1) ...
Setting up openjdk-21-jdk-headless:arm64 (21.0.6~6ea-1) ...
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jar to provide /usr/bin/jar (jar) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/javac to provide /usr/bin/javac (javac) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/javap to provide /usr/bin/javap (javap) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jps to provide /usr/bin/jps (jps) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jwebserver to provide /usr/bin/jwebserver (jwebserver) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode
Setting up default-jre-headless (2:1.21-76) ...
Setting up maven-repo-helper (1.11) ...
Setting up default-jre (2:1.21-76) ...
Setting up openjdk-21-jdk:arm64 (21.0.6~6ea-1) ...
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode
Setting up default-jdk-headless (2:1.21-76) ...
Setting up default-jdk (2:1.21-76) ...
Processing triggers for ca-certificates (20241223) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for ca-certificates-java (20240118) ...
done.
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
 -> Finished parsing the build-deps
I: Building the package
I: Running cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S  > ../sra-sdk_3.0.9+dfsg-7_source.changes
dpkg-buildpackage: info: source package sra-sdk
dpkg-buildpackage: info: source version 3.0.9+dfsg-7
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Aaron M. Ucko <ucko@debian.org>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture arm64
 debian/rules clean
dh clean --buildsystem=cmake \
    --with python3,javahelper,jh_maven_repo_helper
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg'
dh_auto_clean
rm -rf ngs/ngs-java/aarch64-linux-gnu
rm -rf ngs/ngs-bam/aarch64-linux-gnu
rm -f ngs/ngs-bam/Makefile.config
rm -f ngs/ngs-bam/Makefile.config.install.linux.x86_64.prl
rm -f ngs/ngs-bam/Makefile.config.linux.x86_64
rm -f ngs/ngs-bam/reconfigure
rm -rf ngs/ngs-sdk/ngs/unix/generic
rm -rf ngs/ngs-sdk/aarch64-linux-gnu
rm -rf ngs/ngs-python/build ngs/ngs-python/dist
rm -rf ngs/ngs-python/ngs.egg-info
find test tools -name actual -type d | xargs -rt rm -rf
rm -rf ngs/ngs-*/examples/actual/*
rm -fv test/*/*/tmp.kfg
rm -rf libs/ngs-vdb/test/data/SparseFragmentBlobs
rm -rf test/external/vdb-dump/data test/loaders/bam-load/out.sra
find tools/loaders/general-loader/test -name input | xargs -rt rm -rf
rm -f ngs/ngs-sdk/examples/actual.txt
rm debian/libngs-jni.links
rm: cannot remove 'debian/libngs-jni.links': No such file or directory
make[1]: [debian/rules:48: override_dh_auto_clean] Error 1 (ignored)
make[1]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg'
   dh_autoreconf_clean -O--buildsystem=cmake
   jh_clean -O--buildsystem=cmake
Duplicate specification "unlink|u" for option "u"
   dh_clean -O--buildsystem=cmake
 debian/rules binary
dh binary --buildsystem=cmake \
    --with python3,javahelper,jh_maven_repo_helper
   dh_update_autotools_config -O--buildsystem=cmake
   dh_autoreconf -O--buildsystem=cmake
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg'
dh_auto_configure -- -DVDB_LIBDIR=/usr/lib/aarch64-linux-gnu \
    -DVDB_INCDIR=/usr/include/ncbi-vdb -DBUILD_TOOLS_LOADERS=ON \
    -DBUILD_TOOLS_INTERNAL=ON -DBUILD_TOOLS_TEST_TOOLS=ON \
    -DCMAKE_SKIP_RPATH=ON -DTOOLS_ONLY=OFF \
    -DCOMPILER_OPTION_SSE42_SUPPORTED=FALSE
	cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DVDB_LIBDIR=/usr/lib/aarch64-linux-gnu -DVDB_INCDIR=/usr/include/ncbi-vdb -DBUILD_TOOLS_LOADERS=ON -DBUILD_TOOLS_INTERNAL=ON -DBUILD_TOOLS_TEST_TOOLS=ON -DCMAKE_SKIP_RPATH=ON -DTOOLS_ONLY=OFF -DCOMPILER_OPTION_SSE42_SUPPORTED=FALSE ..
CMAKE_VERSION=3.31.3
-- The C compiler identification is GNU 14.2.0
-- The CXX compiler identification is GNU 14.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
CMake Deprecation Warning at build/env.cmake:32 (cmake_policy):
  The OLD behavior for policy CMP0115 will be removed from a future version
  of CMake.

  The cmake-policies(7) manual explains that the OLD behaviors of all
  policies are deprecated and that a policy should be set to OLD only under
  specific short-term circumstances.  Projects should be ported to the NEW
  behavior and not rely on setting a policy to OLD.
Call Stack (most recent call first):
  CMakeLists.txt:62 (include)


BUILD_TOOLS_INTERNAL=ON
BUILD_TOOLS_LOADERS=ON
BUILD_TOOLS_TEST_TOOLS=ON
TOOLS_ONLY=OFF
VERSION=3.0.9
-- Found FLEX: /usr/bin/flex (found suitable version "2.6.4", minimum required is "2.6")
-- Found BISON: /usr/bin/bison (found suitable version "3.8.2", minimum required is "3")
-- Found LibXml2: /usr/lib/aarch64-linux-gnu/libxml2.so (found version "2.9.14")
LIBXML2_INCLUDE_DIR=/usr/include/libxml2
LIBXML2_LIBRARIES=/usr/lib/aarch64-linux-gnu/libxml2.so
-- Found Java: /usr/bin/java (found version "21.0.6") found components: Development
-- Found Python3: /usr/bin/python3 (found version "3.13.1") found components: Interpreter
Using ncbi-vdb interfaces: /usr/include/ncbi-vdb
Using ncbi-vdb binary libraries: /usr/lib/aarch64-linux-gnu
-- Looking for C++ include mbedtls/md.h
-- Looking for C++ include mbedtls/md.h - not found
RUN_SANITIZER_TESTS: OFF
-- Found JNI: /usr/lib/jvm/default-java/include  found components: AWT JVM
-- Found ZLIB: /usr/lib/aarch64-linux-gnu/libz.so (found version "1.3.1")
-- Found BZip2: /usr/lib/aarch64-linux-gnu/libbz2.so (found version "1.0.8")
-- Looking for BZ2_bzCompressInit
-- Looking for BZ2_bzCompressInit - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE
RE2_FOUND=FALSE
SharQ is not built:
ZLIB_FOUND=TRUE
BZip2_FOUND=TRUE
Threads_FOUND=TRUE
RE2_FOUND=FALSE
-- Found HDF5: /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/aarch64-linux-gnu/libcrypto.so;/usr/lib/aarch64-linux-gnu/libcurl.so;/usr/lib/aarch64-linux-gnu/libpthread.a;/usr/lib/aarch64-linux-gnu/libsz.so;/usr/lib/aarch64-linux-gnu/libz.so;/usr/lib/aarch64-linux-gnu/libdl.a;/usr/lib/aarch64-linux-gnu/libm.so (found version "1.14.5") found components: C
CMake Deprecation Warning at tools/test-tools/qa-stats/CMakeLists.txt:1 (cmake_minimum_required):
  Compatibility with CMake < 3.10 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value.  Or, use the <min>...<max> syntax
  to tell CMake that the project requires at least <min> but has been updated
  to work with policies introduced by <max> or earlier.


RE2_FOUND=FALSE
-- Configuring done (3.9s)
-- Generating done (0.5s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
    CMAKE_INSTALL_LOCALSTATEDIR
    CMAKE_INSTALL_RUNSTATEDIR
    CMAKE_INSTALL_SYSCONFDIR
    FETCHCONTENT_FULLY_DISCONNECTED


-- Build files have been written to: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu
make[1]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg'
   jh_linkjars -O--buildsystem=cmake
Duplicate specification "u=s" for option "u"
   dh_auto_build -O--buildsystem=cmake
	cd obj-aarch64-linux-gnu && make -j12 "INSTALL=install --strip-program=true" VERBOSE=1
make[1]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/usr/bin/cmake -S/build/reproducible-path/sra-sdk-3.0.9+dfsg -B/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/CMakeFiles /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu//CMakeFiles/progress.marks
make  -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f shared/CMakeFiles/tk-version.dir/build.make shared/CMakeFiles/tk-version.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ncbi/ngs/CMakeFiles/ngs.dir/build.make ngs/ncbi/ngs/CMakeFiles/ngs.dir/depend
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/shared /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/shared /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/shared/CMakeFiles/tk-version.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/build.make ngs/ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/depend
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs/CMakeFiles/ngs.dir/DependInfo.cmake "--color="
make  -f ngs/ncbi/ngs-py/CMakeFiles/ngs-py.dir/build.make ngs/ncbi/ngs-py/CMakeFiles/ngs-py.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/dispatch /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-py && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs-py\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs-py/CMakeFiles/ngs-py.dir/py_Manager.c.o -MF CMakeFiles/ngs-py.dir/py_Manager.c.o.d -o CMakeFiles/ngs-py.dir/py_Manager.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py/py_Manager.c
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/python /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NCBI-NGS.c.o -MF CMakeFiles/ngs.dir/NCBI-NGS.c.o.d -o CMakeFiles/ngs.dir/NCBI-NGS.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/NCBI-NGS.c
[  0%] Building C object ngs/ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_Manager.c.o
[  0%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Pileup.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-jni && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs-jni\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_Manager.c.o -MF CMakeFiles/ngs-jni.dir/jni_Manager.c.o.d -o CMakeFiles/ngs-jni.dir/jni_Manager.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni/jni_Manager.c
[  1%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceSequence.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceSequence.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/ReferenceSequence.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/ReferenceSequence.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/c++/ReferenceSequence.cpp
[  1%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_PileupEvent.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Pileup.c.o -MF CMakeFiles/ngs.dir/CSRA1_Pileup.c.o.d -o CMakeFiles/ngs.dir/CSRA1_Pileup.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/CSRA1_Pileup.c
[  1%] Building C object ngs/ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_String.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_PileupEvent.c.o -MF CMakeFiles/ngs.dir/CSRA1_PileupEvent.c.o.d -o CMakeFiles/ngs.dir/CSRA1_PileupEvent.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/CSRA1_PileupEvent.c
[  1%] Building C object ngs/ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_ErrorMsg.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-jni && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs-jni\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_ErrorMsg.c.o -MF CMakeFiles/ngs-jni.dir/jni_ErrorMsg.c.o.d -o CMakeFiles/ngs-jni.dir/jni_ErrorMsg.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni/jni_ErrorMsg.c
[  1%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReadCollection.cpp.o
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/build.make ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/build
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-jni && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs-jni\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_String.c.o -MF CMakeFiles/ngs-jni.dir/jni_String.c.o.d -o CMakeFiles/ngs-jni.dir/jni_String.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni/jni_String.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReadCollection.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/ReadCollection.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/ReadCollection.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/c++/ReadCollection.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/build.make ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[  1%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ReadCollectionItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ReadCollectionItf.cpp.o -MF CMakeFiles/ngs-disp.dir/ReadCollectionItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/ReadCollectionItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/dispatch/ReadCollectionItf.cpp
[  1%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_AlignmentItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_AlignmentItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_AlignmentItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_AlignmentItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/python/py_AlignmentItf.cpp
[  1%] Linking C static library ../ilib/libtk-version.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/shared && /usr/bin/cmake -P CMakeFiles/tk-version.dir/cmake_clean_target.cmake
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/shared && /usr/bin/cmake -E cmake_link_script CMakeFiles/tk-version.dir/link.txt --verbose=1
[  1%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Alignment.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Alignment.c.o -MF CMakeFiles/ngs.dir/CSRA1_Alignment.c.o.d -o CMakeFiles/ngs.dir/CSRA1_Alignment.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/CSRA1_Alignment.c
[  1%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_AlignmentIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_AlignmentIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_AlignmentIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_AlignmentIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/python/py_AlignmentIteratorItf.cpp
[  1%] Linking C static library ../../../ilib/libngs-py.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-py && /usr/bin/cmake -P CMakeFiles/ngs-py.dir/cmake_clean_target.cmake
/usr/bin/ar qc ../ilib/libtk-version.a "CMakeFiles/tk-version.dir/toolkit.vers.c.o"
/usr/bin/ranlib ../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[  1%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReferenceWindow.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReferenceWindow.c.o -MF CMakeFiles/ngs.dir/CSRA1_ReferenceWindow.c.o.d -o CMakeFiles/ngs.dir/CSRA1_ReferenceWindow.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/CSRA1_ReferenceWindow.c
[  1%] Linking C static library ../../../ilib/libngs-jni.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-jni && /usr/bin/cmake -P CMakeFiles/ngs-jni.dir/cmake_clean_target.cmake
[  1%] Built target tk-version
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-py && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-py.dir/link.txt --verbose=1
make  -f ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/build.make ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/java /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-jni && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-jni.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/build.make ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/usr/bin/ar qc ../../../ilib/libngs-py.a "CMakeFiles/ngs-py.dir/py_Manager.c.o"
/usr/bin/ranlib ../../../ilib/libngs-py.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[  2%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadCollectionItf.cpp.o
/usr/bin/ar qc ../../../ilib/libngs-jni.a "CMakeFiles/ngs-jni.dir/jni_Manager.c.o" "CMakeFiles/ngs-jni.dir/jni_String.c.o" "CMakeFiles/ngs-jni.dir/jni_ErrorMsg.c.o"
/usr/bin/ranlib ../../../ilib/libngs-jni.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadCollectionItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_ReadCollectionItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_ReadCollectionItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/java/jni_ReadCollectionItf.cpp
[  2%] Built target ngs-py
make  -f ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/build.make ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/adapter /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/DependInfo.cmake "--color="
[  2%] Built target ngs-jni
make  -f ngs/ngs-java/CMakeFiles/ngs-java.dir/build.make ngs/ngs-java/CMakeFiles/ngs-java.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-java.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/build.make ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-java/CMakeFiles/ngs-java.dir/build.make ngs/ngs-java/CMakeFiles/ngs-java.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[  2%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ReadCollectionItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ReadCollectionItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/ReadCollectionItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/ReadCollectionItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/adapter/ReadCollectionItf.cpp
[  2%] Building Java objects for ngs-java.jar
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java && /usr/bin/cmake -DCMAKE_JAVA_CLASS_OUTPUT_PATH=/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-java.dir -DCMAKE_JAR_CLASSES_PREFIX= -P /usr/share/cmake-3.31/Modules/UseJava/ClearClassFiles.cmake --log-level STATUS
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java && /usr/bin/javac -classpath :/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java:/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib -d /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-java.dir -h ./jni @/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-java.dir/java_sources
[  2%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceIterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceIterator.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/ReferenceIterator.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/ReferenceIterator.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/c++/ReferenceIterator.cpp
[  2%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Reference.cpp.o
[  2%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Reference.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Reference.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/Reference.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/Reference.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/c++/Reference.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Reference.c.o -MF CMakeFiles/ngs.dir/CSRA1_Reference.c.o.d -o CMakeFiles/ngs.dir/CSRA1_Reference.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/CSRA1_Reference.c
[  2%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_FragmentItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_FragmentItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_FragmentItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_FragmentItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/python/py_FragmentItf.cpp
[  2%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_FragmentIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_FragmentIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_FragmentIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_FragmentIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/python/py_FragmentIteratorItf.cpp
[  3%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ReferenceItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ReferenceItf.cpp.o -MF CMakeFiles/ngs-disp.dir/ReferenceItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/ReferenceItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/dispatch/ReferenceItf.cpp
[  3%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReadCollection.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReadCollection.c.o -MF CMakeFiles/ngs.dir/CSRA1_ReadCollection.c.o.d -o CMakeFiles/ngs.dir/CSRA1_ReadCollection.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/CSRA1_ReadCollection.c
[  3%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Read.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Read.c.o -MF CMakeFiles/ngs.dir/CSRA1_Read.c.o.d -o CMakeFiles/ngs.dir/CSRA1_Read.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/CSRA1_Read.c
[  3%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/PileupItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/PileupItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/PileupItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/PileupItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/adapter/PileupItf.cpp
[  3%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/PileupIterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/PileupIterator.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/PileupIterator.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/PileupIterator.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/c++/PileupIterator.cpp
[  3%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_ReferenceIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_ReferenceIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/java/jni_ReferenceIteratorItf.cpp
[  3%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Pileup.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Pileup.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/Pileup.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/Pileup.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/c++/Pileup.cpp
[  4%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/EBI_ReferenceSequence.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/EBI_ReferenceSequence.c.o -MF CMakeFiles/ngs.dir/EBI_ReferenceSequence.c.o.d -o CMakeFiles/ngs.dir/EBI_ReferenceSequence.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/EBI_ReferenceSequence.c
[  4%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_PackageItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_PackageItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_PackageItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_PackageItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/python/py_PackageItf.cpp
[  4%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_Statistics.c.o
[  4%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_PileupEventItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_Statistics.c.o -MF CMakeFiles/ngs.dir/SRA_Statistics.c.o.d -o CMakeFiles/ngs.dir/SRA_Statistics.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/SRA_Statistics.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_PileupEventItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_PileupEventItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_PileupEventItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/python/py_PileupEventItf.cpp
[  4%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEventIterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEventIterator.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/PileupEventIterator.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/PileupEventIterator.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/c++/PileupEventIterator.cpp
[  4%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_DB_ReadCollection.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_DB_ReadCollection.c.o -MF CMakeFiles/ngs.dir/SRA_DB_ReadCollection.c.o.d -o CMakeFiles/ngs.dir/SRA_DB_ReadCollection.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/SRA_DB_ReadCollection.c
[  4%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_Read.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_Read.c.o -MF CMakeFiles/ngs.dir/SRA_Read.c.o.d -o CMakeFiles/ngs.dir/SRA_Read.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/SRA_Read.c
[  4%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/PileupEventItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/PileupEventItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/PileupEventItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/PileupEventItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/adapter/PileupEventItf.cpp
[  4%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_ReferenceItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_ReferenceItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/java/jni_ReferenceItf.cpp
[  4%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEvent.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEvent.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/PileupEvent.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/PileupEvent.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/c++/PileupEvent.cpp
[  4%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/AlignmentIterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/AlignmentIterator.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/AlignmentIterator.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/AlignmentIterator.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/c++/AlignmentIterator.cpp
[  4%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroup.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroup.c.o -MF CMakeFiles/ngs.dir/SRA_ReadGroup.c.o.d -o CMakeFiles/ngs.dir/SRA_ReadGroup.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/SRA_ReadGroup.c
[  4%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroupInfo.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroupInfo.c.o -MF CMakeFiles/ngs.dir/SRA_ReadGroupInfo.c.o.d -o CMakeFiles/ngs.dir/SRA_ReadGroupInfo.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/SRA_ReadGroupInfo.c
[  5%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_PileupEventIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_PileupEventIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_PileupEventIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_PileupEventIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/python/py_PileupEventIteratorItf.cpp
[  5%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ReferenceItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ReferenceItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/ReferenceItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/ReferenceItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/adapter/ReferenceItf.cpp
[  5%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_PileupItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_PileupItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_PileupItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_PileupItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/python/py_PileupItf.cpp
[  5%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Alignment.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Alignment.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/Alignment.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/Alignment.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/c++/Alignment.cpp
[  5%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadCollection.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadCollection.c.o -MF CMakeFiles/ngs.dir/SRA_ReadCollection.c.o.d -o CMakeFiles/ngs.dir/SRA_ReadCollection.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/SRA_ReadCollection.c
[  5%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ReferenceSequenceItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ReferenceSequenceItf.cpp.o -MF CMakeFiles/ngs-disp.dir/ReferenceSequenceItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/ReferenceSequenceItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/dispatch/ReferenceSequenceItf.cpp
[  5%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReferenceSequence.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReferenceSequence.c.o -MF CMakeFiles/ngs.dir/SRA_ReferenceSequence.c.o.d -o CMakeFiles/ngs.dir/SRA_ReferenceSequence.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/SRA_ReferenceSequence.c
[  5%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Statistics.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Statistics.c.o -MF CMakeFiles/ngs.dir/NGS_Statistics.c.o.d -o CMakeFiles/ngs.dir/NGS_Statistics.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/NGS_Statistics.c
[  6%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroupIterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroupIterator.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/ReadGroupIterator.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/ReadGroupIterator.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/c++/ReadGroupIterator.cpp
[  6%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroup.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroup.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/ReadGroup.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/ReadGroup.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/c++/ReadGroup.cpp
[  6%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceSequenceItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceSequenceItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_ReferenceSequenceItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_ReferenceSequenceItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/java/jni_ReferenceSequenceItf.cpp
[  6%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_PileupIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_PileupIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_PileupIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_PileupIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/python/py_PileupIteratorItf.cpp
[  7%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadCollection.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadCollection.c.o -MF CMakeFiles/ngs.dir/NGS_ReadCollection.c.o.d -o CMakeFiles/ngs.dir/NGS_ReadCollection.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/NGS_ReadCollection.c
[  7%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ReferenceSequenceItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ReferenceSequenceItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/ReferenceSequenceItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/ReferenceSequenceItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/adapter/ReferenceSequenceItf.cpp
[  7%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_PileupEvent.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_PileupEvent.c.o -MF CMakeFiles/ngs.dir/NGS_PileupEvent.c.o.d -o CMakeFiles/ngs.dir/NGS_PileupEvent.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/NGS_PileupEvent.c
[  7%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Pileup.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Pileup.c.o -MF CMakeFiles/ngs.dir/NGS_Pileup.c.o.d -o CMakeFiles/ngs.dir/NGS_Pileup.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/NGS_Pileup.c
[  7%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReadIterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReadIterator.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/ReadIterator.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/ReadIterator.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/c++/ReadIterator.cpp
[  7%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/PileupItf.cpp.o
[  7%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReadCollectionItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReadCollectionItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_ReadCollectionItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_ReadCollectionItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/python/py_ReadCollectionItf.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/PileupItf.cpp.o -MF CMakeFiles/ngs-disp.dir/PileupItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/PileupItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/dispatch/PileupItf.cpp
[  7%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_PileupIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_PileupIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/java/jni_PileupIteratorItf.cpp
ngs/itf/Refcount.java:57: warning: [removal] finalize() in Object has been deprecated and marked for removal
    protected void finalize ()
                   ^
[  7%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReadGroupItf.cpp.o
[  7%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Read.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Read.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/Read.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/Read.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/c++/Read.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReadGroupItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_ReadGroupItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_ReadGroupItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/python/py_ReadGroupItf.cpp
[  7%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadGroup.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadGroup.c.o -MF CMakeFiles/ngs.dir/NGS_ReadGroup.c.o.d -o CMakeFiles/ngs.dir/NGS_ReadGroup.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/NGS_ReadGroup.c
[  7%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/AlignmentItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/AlignmentItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/AlignmentItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/AlignmentItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/adapter/AlignmentItf.cpp
[  7%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Alignment.c.o
[  7%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Reference.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Alignment.c.o -MF CMakeFiles/ngs.dir/NGS_Alignment.c.o.d -o CMakeFiles/ngs.dir/NGS_Alignment.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/NGS_Alignment.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Reference.c.o -MF CMakeFiles/ngs.dir/NGS_Reference.c.o.d -o CMakeFiles/ngs.dir/NGS_Reference.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/NGS_Reference.c
[  7%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReadGroupIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReadGroupIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_ReadGroupIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_ReadGroupIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/python/py_ReadGroupIteratorItf.cpp
[  7%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceSequence.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceSequence.c.o -MF CMakeFiles/ngs.dir/NGS_ReferenceSequence.c.o.d -o CMakeFiles/ngs.dir/NGS_ReferenceSequence.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/NGS_ReferenceSequence.c
[  7%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/PileupEventItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/PileupEventItf.cpp.o -MF CMakeFiles/ngs-disp.dir/PileupEventItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/PileupEventItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/dispatch/PileupEventItf.cpp
[  7%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_PileupItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_PileupItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/java/jni_PileupItf.cpp
[  7%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/FragmentIterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/FragmentIterator.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/FragmentIterator.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/FragmentIterator.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/c++/FragmentIterator.cpp
[  7%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReadItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReadItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_ReadItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_ReadItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/python/py_ReadItf.cpp
[  7%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Read.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Read.c.o -MF CMakeFiles/ngs.dir/NGS_Read.c.o.d -o CMakeFiles/ngs.dir/NGS_Read.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/NGS_Read.c
[  7%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Fragment.cpp.o
[  7%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReadIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Fragment.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/Fragment.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/Fragment.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/c++/Fragment.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReadIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_ReadIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_ReadIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/python/py_ReadIteratorItf.cpp
[  7%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_ReferenceItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_ReferenceItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/python/py_ReferenceItf.cpp
[  7%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ReadGroupItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ReadGroupItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/ReadGroupItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/ReadGroupItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/adapter/ReadGroupItf.cpp
[  7%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/AlignmentItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/AlignmentItf.cpp.o -MF CMakeFiles/ngs-disp.dir/AlignmentItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/AlignmentItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/dispatch/AlignmentItf.cpp
[  7%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Fragment.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Fragment.c.o -MF CMakeFiles/ngs.dir/NGS_Fragment.c.o.d -o CMakeFiles/ngs.dir/NGS_Fragment.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/NGS_Fragment.c
[  8%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Cursor.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Cursor.c.o -MF CMakeFiles/ngs.dir/NGS_Cursor.c.o.d -o CMakeFiles/ngs.dir/NGS_Cursor.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/NGS_Cursor.c
[  8%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Statistics.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Statistics.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/Statistics.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/Statistics.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/c++/Statistics.cpp
[  8%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupEventIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupEventIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_PileupEventIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_PileupEventIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/java/jni_PileupEventIteratorItf.cpp
[  8%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/StringRef.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/StringRef.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/StringRef.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/StringRef.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/c++/StringRef.cpp
[  9%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_ReferenceIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_ReferenceIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/python/py_ReferenceIteratorItf.cpp
[  9%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceSequenceItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceSequenceItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_ReferenceSequenceItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_ReferenceSequenceItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/python/py_ReferenceSequenceItf.cpp
[  9%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Refcount.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Refcount.c.o -MF CMakeFiles/ngs.dir/NGS_Refcount.c.o.d -o CMakeFiles/ngs.dir/NGS_Refcount.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/NGS_Refcount.c
[ 10%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ReadItf.cpp.o
[ 10%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_StatisticsItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ReadItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/ReadItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/ReadItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/adapter/ReadItf.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_StatisticsItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_StatisticsItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_StatisticsItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/python/py_StatisticsItf.cpp
[ 10%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupEventItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupEventItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_PileupEventItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_PileupEventItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/java/jni_PileupEventItf.cpp
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
1 warning
[ 10%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_String.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java && /usr/bin/cmake -E touch /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-java.dir/java_compiled_ngs-java
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_String.c.o -MF CMakeFiles/ngs.dir/NGS_String.c.o.d -o CMakeFiles/ngs.dir/NGS_String.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/NGS_String.c
[ 10%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Id.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Id.c.o -MF CMakeFiles/ngs.dir/NGS_Id.c.o.d -o CMakeFiles/ngs.dir/NGS_Id.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/NGS_Id.c
[ 10%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ReadGroupItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ReadGroupItf.cpp.o -MF CMakeFiles/ngs-disp.dir/ReadGroupItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/ReadGroupItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/dispatch/ReadGroupItf.cpp
[ 10%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_AlignmentIteratorItf.cpp.o
[ 10%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_Refcount.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_AlignmentIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_AlignmentIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_AlignmentIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/java/jni_AlignmentIteratorItf.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_Refcount.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_Refcount.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_Refcount.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/python/py_Refcount.cpp
[ 10%] Generating CMakeFiles/ngs-java.dir/java_class_filelist
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java && /usr/bin/cmake -DCMAKE_JAVA_CLASS_OUTPUT_PATH=/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-java.dir -DCMAKE_JAR_CLASSES_PREFIX= -P /usr/share/cmake-3.31/Modules/UseJava/ClassFilelist.cmake
[ 10%] Creating Java archive ngs-java.jar
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-java.dir && /usr/bin/jar -cf /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib/ngs-java.jar @java_class_filelist
[ 10%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ErrBlock.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ErrBlock.c.o -MF CMakeFiles/ngs.dir/NGS_ErrBlock.c.o.d -o CMakeFiles/ngs.dir/NGS_ErrBlock.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/NGS_ErrBlock.c
[ 10%] Linking CXX static library ../../../../ilib/libngs-bind-c++.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/cmake -P CMakeFiles/ngs-bind-c++.dir/cmake_clean_target.cmake
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-bind-c++.dir/link.txt --verbose=1
[ 10%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/FragmentItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/FragmentItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/FragmentItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/FragmentItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/adapter/FragmentItf.cpp
[ 10%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlob.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlob.c.o -MF CMakeFiles/ngs.dir/NGS_FragmentBlob.c.o.d -o CMakeFiles/ngs.dir/NGS_FragmentBlob.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/NGS_FragmentBlob.c
/usr/bin/ar qc ../../../../ilib/libngs-bind-c++.a "CMakeFiles/ngs-bind-c++.dir/ReadCollection.cpp.o" "CMakeFiles/ngs-bind-c++.dir/ReferenceSequence.cpp.o" "CMakeFiles/ngs-bind-c++.dir/ReferenceIterator.cpp.o" "CMakeFiles/ngs-bind-c++.dir/Reference.cpp.o" "CMakeFiles/ngs-bind-c++.dir/PileupIterator.cpp.o" "CMakeFiles/ngs-bind-c++.dir/Pileup.cpp.o" "CMakeFiles/ngs-bind-c++.dir/PileupEventIterator.cpp.o" "CMakeFiles/ngs-bind-c++.dir/PileupEvent.cpp.o" "CMakeFiles/ngs-bind-c++.dir/AlignmentIterator.cpp.o" "CMakeFiles/ngs-bind-c++.dir/Alignment.cpp.o" "CMakeFiles/ngs-bind-c++.dir/ReadGroupIterator.cpp.o" "CMakeFiles/ngs-bind-c++.dir/ReadGroup.cpp.o" "CMakeFiles/ngs-bind-c++.dir/ReadIterator.cpp.o" "CMakeFiles/ngs-bind-c++.dir/Read.cpp.o" "CMakeFiles/ngs-bind-c++.dir/FragmentIterator.cpp.o" "CMakeFiles/ngs-bind-c++.dir/Fragment.cpp.o" "CMakeFiles/ngs-bind-c++.dir/Statistics.cpp.o" "CMakeFiles/ngs-bind-c++.dir/StringRef.cpp.o"
/usr/bin/ranlib ../../../../ilib/libngs-bind-c++.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 10%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlobIterator.c.o
[ 10%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_StringItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlobIterator.c.o -MF CMakeFiles/ngs.dir/NGS_FragmentBlobIterator.c.o.d -o CMakeFiles/ngs.dir/NGS_FragmentBlobIterator.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/NGS_FragmentBlobIterator.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_StringItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_StringItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_StringItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/python/py_StringItf.cpp
[ 10%] Built target ngs-bind-c++
make  -f ngs/ngs-java/CMakeFiles/ngs-doc_javadoc.dir/build.make ngs/ngs-java/CMakeFiles/ngs-doc_javadoc.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-doc_javadoc.dir/DependInfo.cmake "--color="
[ 11%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_AlignmentItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_AlignmentItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_AlignmentItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_AlignmentItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/java/jni_AlignmentItf.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-java/CMakeFiles/ngs-doc_javadoc.dir/build.make ngs/ngs-java/CMakeFiles/ngs-doc_javadoc.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java && /usr/bin/javadoc -d /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc -sourcepath "/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java" gov.nih.nlm.ncbi.ngs ngs
make  -f libs/kxml/CMakeFiles/kxml.dir/build.make libs/kxml/CMakeFiles/kxml.dir/depend
[ 11%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadGroupIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadGroupIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_ReadGroupIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_ReadGroupIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/java/jni_ReadGroupIteratorItf.cpp
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/kxml /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/kxml /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/kxml/CMakeFiles/kxml.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/kxml/CMakeFiles/kxml.dir/build.make libs/kxml/CMakeFiles/kxml.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 11%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadGroupItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadGroupItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_ReadGroupItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_ReadGroupItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/java/jni_ReadGroupItf.cpp
[ 11%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ReadItf.cpp.o
[ 11%] Building C object libs/kxml/CMakeFiles/kxml.dir/xml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/kxml && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -D__mod__=\"libs/kxml\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/usr/include/libxml2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/kxml/CMakeFiles/kxml.dir/xml.c.o -MF CMakeFiles/kxml.dir/xml.c.o.d -o CMakeFiles/kxml.dir/xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/kxml/xml.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ReadItf.cpp.o -MF CMakeFiles/ngs-disp.dir/ReadItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/ReadItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/dispatch/ReadItf.cpp
[ 11%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlob.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlob.c.o -MF CMakeFiles/ngs.dir/NGS_ReferenceBlob.c.o.d -o CMakeFiles/ngs.dir/NGS_ReferenceBlob.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/NGS_ReferenceBlob.c
[ 11%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/FragmentItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/FragmentItf.cpp.o -MF CMakeFiles/ngs-disp.dir/FragmentItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/FragmentItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/dispatch/FragmentItf.cpp
[ 11%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlobIterator.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlobIterator.c.o -MF CMakeFiles/ngs.dir/NGS_ReferenceBlobIterator.c.o.d -o CMakeFiles/ngs.dir/NGS_ReferenceBlobIterator.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/NGS_ReferenceBlobIterator.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-java.dir && /usr/bin/cmake -D_JAVA_TARGET_DIR=/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib -D_JAVA_TARGET_OUTPUT_NAME=ngs-java.jar -D_JAVA_TARGET_OUTPUT_LINK= -P /usr/share/cmake-3.31/Modules/UseJava/Symlinks.cmake
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 11%] Linking CXX static library ../../../../ilib/libngs-bind-python.a
[ 11%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/StatisticsItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/cmake -P CMakeFiles/ngs-bind-python.dir/cmake_clean_target.cmake
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/StatisticsItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/StatisticsItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/StatisticsItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/adapter/StatisticsItf.cpp
[ 11%] Built target ngs-java
make  -f libs/loader/CMakeFiles/loader.dir/build.make libs/loader/CMakeFiles/loader.dir/depend
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-bind-python.dir/link.txt --verbose=1
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/loader/CMakeFiles/loader.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/loader/CMakeFiles/loader.dir/build.make libs/loader/CMakeFiles/loader.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/vdb-sqlite/CMakeFiles/vdb-sqlite.dir/build.make libs/vdb-sqlite/CMakeFiles/vdb-sqlite.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/vdb-sqlite /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/vdb-sqlite /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/vdb-sqlite/CMakeFiles/vdb-sqlite.dir/DependInfo.cmake "--color="
[ 13%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/VByteBlob.c.o
/usr/bin/ar qc ../../../../ilib/libngs-bind-python.a "CMakeFiles/ngs-bind-python.dir/py_AlignmentItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_AlignmentIteratorItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_FragmentItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_FragmentIteratorItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_PackageItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_PileupEventItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_PileupEventIteratorItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_PileupItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_PileupIteratorItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_ReadCollectionItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_ReadGroupItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_ReadGroupIteratorItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_ReadItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_ReadIteratorItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_ReferenceItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_ReferenceIteratorItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_ReferenceSequenceItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_StatisticsItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_Refcount.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_StringItf.cpp.o"
/usr/bin/ranlib ../../../../ilib/libngs-bind-python.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/VByteBlob.c.o -MF CMakeFiles/ngs.dir/VByteBlob.c.o.d -o CMakeFiles/ngs.dir/VByteBlob.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs/VByteBlob.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 12%] Building C object libs/loader/CMakeFiles/loader.dir/progressbar.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -D__mod__=\"libs/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/loader/CMakeFiles/loader.dir/progressbar.c.o -MF CMakeFiles/loader.dir/progressbar.c.o.d -o CMakeFiles/loader.dir/progressbar.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/loader/progressbar.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/vdb-sqlite/CMakeFiles/vdb-sqlite.dir/build.make libs/vdb-sqlite/CMakeFiles/vdb-sqlite.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 13%] Built target ngs-bind-python
make  -f libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/build.make libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/DependInfo.cmake "--color="
[ 13%] Building C object libs/vdb-sqlite/CMakeFiles/vdb-sqlite.dir/sqlite3.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/vdb-sqlite && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -D__mod__=\"libs/vdb-sqlite\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/vdb-sqlite/CMakeFiles/vdb-sqlite.dir/sqlite3.c.o -MF CMakeFiles/vdb-sqlite.dir/sqlite3.c.o.d -o CMakeFiles/vdb-sqlite.dir/sqlite3.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/vdb-sqlite/sqlite3.c
[ 13%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_ReadIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_ReadIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/java/jni_ReadIteratorItf.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/build.make libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 13%] Building CXX object libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/VdbReadCollection.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/VdbReadCollection.cpp.o -MF CMakeFiles/ngs-vdb.dir/VdbReadCollection.cpp.o.d -o CMakeFiles/ngs-vdb.dir/VdbReadCollection.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/VdbReadCollection.cpp
[ 13%] Linking C static library ../../../ilib/libngs.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cmake -P CMakeFiles/ngs.dir/cmake_clean_target.cmake
[ 13%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_FragmentItf.cpp.o
[ 13%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_FragmentItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_FragmentItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_FragmentItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/java/jni_FragmentItf.cpp
[ 13%] Building C object libs/loader/CMakeFiles/loader.dir/loader-file.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -D__mod__=\"libs/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/loader/CMakeFiles/loader.dir/loader-file.c.o -MF CMakeFiles/loader.dir/loader-file.c.o.d -o CMakeFiles/loader.dir/loader-file.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/loader/loader-file.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_ReadItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_ReadItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/java/jni_ReadItf.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../ilib/libngs.a "CMakeFiles/ngs.dir/NCBI-NGS.c.o" CMakeFiles/ngs.dir/CSRA1_PileupEvent.c.o CMakeFiles/ngs.dir/CSRA1_Pileup.c.o CMakeFiles/ngs.dir/CSRA1_Alignment.c.o CMakeFiles/ngs.dir/CSRA1_ReferenceWindow.c.o CMakeFiles/ngs.dir/CSRA1_Reference.c.o CMakeFiles/ngs.dir/CSRA1_ReadCollection.c.o CMakeFiles/ngs.dir/CSRA1_Read.c.o CMakeFiles/ngs.dir/EBI_ReferenceSequence.c.o CMakeFiles/ngs.dir/SRA_Statistics.c.o CMakeFiles/ngs.dir/SRA_DB_ReadCollection.c.o CMakeFiles/ngs.dir/SRA_Read.c.o CMakeFiles/ngs.dir/SRA_ReadGroup.c.o CMakeFiles/ngs.dir/SRA_ReadGroupInfo.c.o CMakeFiles/ngs.dir/SRA_ReadCollection.c.o CMakeFiles/ngs.dir/SRA_ReferenceSequence.c.o CMakeFiles/ngs.dir/NGS_Statistics.c.o CMakeFiles/ngs.dir/NGS_ReadCollection.c.o CMakeFiles/ngs.dir/NGS_PileupEvent.c.o CMakeFiles/ngs.dir/NGS_Pileup.c.o CMakeFiles/ngs.dir/NGS_ReadGroup.c.o CMakeFiles/ngs.dir/NGS_Alignment.c.o CMakeFiles/ngs.dir/NGS_Reference.c.o CMakeFiles/ngs.dir/NGS_ReferenceSequence.c.o CMakeFiles/ngs.dir/NGS_Read.c.o CMakeFiles/ngs.dir/NGS_Fragment.c.o CMakeFiles/ngs.dir/NGS_Cursor.c.o CMakeFiles/ngs.dir/NGS_Refcount.c.o CMakeFiles/ngs.dir/NGS_String.c.o CMakeFiles/ngs.dir/NGS_Id.c.o CMakeFiles/ngs.dir/NGS_ErrBlock.c.o CMakeFiles/ngs.dir/NGS_FragmentBlob.c.o CMakeFiles/ngs.dir/NGS_FragmentBlobIterator.c.o CMakeFiles/ngs.dir/NGS_ReferenceBlob.c.o CMakeFiles/ngs.dir/NGS_ReferenceBlobIterator.c.o CMakeFiles/ngs.dir/VByteBlob.c.o
/usr/bin/ranlib ../../../ilib/libngs.a
[ 13%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/StatisticsItf.cpp.o
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/StatisticsItf.cpp.o -MF CMakeFiles/ngs-disp.dir/StatisticsItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/StatisticsItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/dispatch/StatisticsItf.cpp
[ 13%] Built target ngs
make  -f libs/ngs-vdb/test/CMakeFiles/ngs-makedb.dir/build.make libs/ngs-vdb/test/CMakeFiles/ngs-makedb.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/ngs-makedb.dir/DependInfo.cmake "--color="
[ 13%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_StatisticsItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_StatisticsItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_StatisticsItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_StatisticsItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/java/jni_StatisticsItf.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/ngs-makedb.dir/build.make libs/ngs-vdb/test/CMakeFiles/ngs-makedb.dir/build
[ 13%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/StringItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/StringItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/StringItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/StringItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/adapter/StringItf.cpp
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 13%] Building CXX object libs/ngs-vdb/test/CMakeFiles/ngs-makedb.dir/ngstest_makedb.cpp.o
[ 13%] Building C object libs/kxml/CMakeFiles/kxml.dir/xtoc-parsexml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/ngs-makedb.dir/ngstest_makedb.cpp.o -MF CMakeFiles/ngs-makedb.dir/ngstest_makedb.cpp.o.d -o CMakeFiles/ngs-makedb.dir/ngstest_makedb.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest_makedb.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/kxml && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -D__mod__=\"libs/kxml\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/usr/include/libxml2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/kxml/CMakeFiles/kxml.dir/xtoc-parsexml.c.o -MF CMakeFiles/kxml.dir/xtoc-parsexml.c.o.d -o CMakeFiles/kxml.dir/xtoc-parsexml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/kxml/xtoc-parsexml.c
[ 14%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/PackageItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/PackageItf.cpp.o -MF CMakeFiles/ngs-disp.dir/PackageItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/PackageItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/dispatch/PackageItf.cpp
[ 14%] Building C object libs/loader/CMakeFiles/loader.dir/loader-meta.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -D__mod__=\"libs/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/loader/CMakeFiles/loader.dir/loader-meta.c.o -MF CMakeFiles/loader.dir/loader-meta.c.o.d -o CMakeFiles/loader.dir/loader-meta.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/loader/loader-meta.c
[ 14%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_Package.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_Package.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_Package.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_Package.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/java/jni_Package.cpp
[ 14%] Building C object libs/loader/CMakeFiles/loader.dir/queue-file.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -D__mod__=\"libs/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/loader/CMakeFiles/loader.dir/queue-file.c.o -MF CMakeFiles/loader.dir/queue-file.c.o.d -o CMakeFiles/loader.dir/queue-file.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/loader/queue-file.c
[ 14%] Building C object libs/kxml/CMakeFiles/kxml.dir/xtoc.c.o
[ 14%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_String.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/kxml && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -D__mod__=\"libs/kxml\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/usr/include/libxml2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/kxml/CMakeFiles/kxml.dir/xtoc.c.o -MF CMakeFiles/kxml.dir/xtoc.c.o.d -o CMakeFiles/kxml.dir/xtoc.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/kxml/xtoc.c
Loading source files for package gov.nih.nlm.ncbi.ngs...
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_String.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_String.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_String.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/java/jni_String.cpp
Loading source files for package ngs...
[ 14%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/StringItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/StringItf.cpp.o -MF CMakeFiles/ngs-disp.dir/StringItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/StringItf.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/dispatch/StringItf.cpp
[ 14%] Building CXX object libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/FragmentBlobIterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/FragmentBlobIterator.cpp.o -MF CMakeFiles/ngs-vdb.dir/FragmentBlobIterator.cpp.o.d -o CMakeFiles/ngs-vdb.dir/FragmentBlobIterator.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/FragmentBlobIterator.cpp
[ 14%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/Refcount.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/Refcount.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/Refcount.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/Refcount.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/adapter/Refcount.cpp
[ 15%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_Refcount.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_Refcount.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_Refcount.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_Refcount.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/java/jni_Refcount.cpp
[ 15%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/Refcount.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/Refcount.cpp.o -MF CMakeFiles/ngs-disp.dir/Refcount.cpp.o.d -o CMakeFiles/ngs-disp.dir/Refcount.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/dispatch/Refcount.cpp
Constructing Javadoc information...
[ 15%] Building C object libs/loader/CMakeFiles/loader.dir/alignment-writer.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -D__mod__=\"libs/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/loader/CMakeFiles/loader.dir/alignment-writer.c.o -MF CMakeFiles/loader.dir/alignment-writer.c.o.d -o CMakeFiles/loader.dir/alignment-writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/loader/alignment-writer.c
[ 15%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/VTable.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/VTable.cpp.o -MF CMakeFiles/ngs-disp.dir/VTable.cpp.o.d -o CMakeFiles/ngs-disp.dir/VTable.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/dispatch/VTable.cpp
[ 15%] Building CXX object libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/FragmentBlob.cpp.o
[ 15%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ErrorMsg.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ErrorMsg.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_ErrorMsg.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_ErrorMsg.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/language/java/jni_ErrorMsg.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/FragmentBlob.cpp.o -MF CMakeFiles/ngs-vdb.dir/FragmentBlob.cpp.o.d -o CMakeFiles/ngs-vdb.dir/FragmentBlob.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/FragmentBlob.cpp
[ 16%] Building CXX object libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/VdbReference.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/VdbReference.cpp.o -MF CMakeFiles/ngs-vdb.dir/VdbReference.cpp.o.d -o CMakeFiles/ngs-vdb.dir/VdbReference.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/VdbReference.cpp
[ 16%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ErrBlock.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ErrBlock.cpp.o -MF CMakeFiles/ngs-disp.dir/ErrBlock.cpp.o.d -o CMakeFiles/ngs-disp.dir/ErrBlock.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/dispatch/ErrBlock.cpp
[ 16%] Building C object libs/loader/CMakeFiles/loader.dir/common-reader.c.o
[ 16%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ErrorMsg.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ErrorMsg.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/ErrorMsg.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/ErrorMsg.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/adapter/ErrorMsg.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -D__mod__=\"libs/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/loader/CMakeFiles/loader.dir/common-reader.c.o -MF CMakeFiles/loader.dir/common-reader.c.o.d -o CMakeFiles/loader.dir/common-reader.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/loader/common-reader.c
[ 16%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ErrorMsg.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ErrorMsg.cpp.o -MF CMakeFiles/ngs-disp.dir/ErrorMsg.cpp.o.d -o CMakeFiles/ngs-disp.dir/ErrorMsg.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/dispatch/ErrorMsg.cpp
[ 16%] Linking CXX static library ../../../../ilib/libngs-bind-java.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/cmake -P CMakeFiles/ngs-bind-java.dir/cmake_clean_target.cmake
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-bind-java.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../../ilib/libngs-bind-java.a "CMakeFiles/ngs-bind-java.dir/jni_ReadCollectionItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_ReferenceIteratorItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_ReferenceItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_ReferenceSequenceItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_PileupIteratorItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_PileupItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_PileupEventIteratorItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_PileupEventItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_AlignmentIteratorItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_AlignmentItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_ReadGroupIteratorItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_ReadGroupItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_ReadIteratorItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_ReadItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_FragmentItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_StatisticsItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_Package.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_String.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_Refcount.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_ErrorMsg.cpp.o"
/usr/bin/ranlib ../../../../ilib/libngs-bind-java.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ascp/CMakeFiles/ascp.dir/build.make libs/ascp/CMakeFiles/ascp.dir/depend
[ 16%] Built target ngs-bind-java
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ascp /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ascp /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ascp/CMakeFiles/ascp.dir/DependInfo.cmake "--color="
make  -f libs/diagnose/CMakeFiles/diagnose.dir/build.make libs/diagnose/CMakeFiles/diagnose.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/diagnose /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/diagnose /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/diagnose/CMakeFiles/diagnose.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 16%] Building C object libs/loader/CMakeFiles/loader.dir/common-writer.c.o
make  -f libs/ascp/CMakeFiles/ascp.dir/build.make libs/ascp/CMakeFiles/ascp.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/diagnose/CMakeFiles/diagnose.dir/build.make libs/diagnose/CMakeFiles/diagnose.dir/build
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -D__mod__=\"libs/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/loader/CMakeFiles/loader.dir/common-writer.c.o -MF CMakeFiles/loader.dir/common-writer.c.o.d -o CMakeFiles/loader.dir/common-writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/loader/common-writer.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 16%] Linking C static library ../../ilib/libkxml.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/kxml && /usr/bin/cmake -P CMakeFiles/kxml.dir/cmake_clean_target.cmake
[ 16%] Building C object libs/ascp/CMakeFiles/ascp.dir/ascp.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ascp && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -D__mod__=\"libs/ascp\" -Darm64 -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ascp -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/ascp/CMakeFiles/ascp.dir/ascp.c.o -MF CMakeFiles/ascp.dir/ascp.c.o.d -o CMakeFiles/ascp.dir/ascp.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ascp/ascp.c
[ 16%] Building C object libs/diagnose/CMakeFiles/diagnose.dir/diagnose.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/diagnose && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -D__mod__=\"libs/ascp\" -Darm64 -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/diagnose -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/diagnose/CMakeFiles/diagnose.dir/diagnose.c.o -MF CMakeFiles/diagnose.dir/diagnose.c.o.d -o CMakeFiles/diagnose.dir/diagnose.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/diagnose/diagnose.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/kxml && /usr/bin/cmake -E cmake_link_script CMakeFiles/kxml.dir/link.txt --verbose=1
[ 16%] Building C object libs/loader/CMakeFiles/loader.dir/mmarray.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -D__mod__=\"libs/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/loader/CMakeFiles/loader.dir/mmarray.c.o -MF CMakeFiles/loader.dir/mmarray.c.o.d -o CMakeFiles/loader.dir/mmarray.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/loader/mmarray.c
[ 16%] Linking CXX static library ../../../ilib/libngs-disp.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/cmake -P CMakeFiles/ngs-disp.dir/cmake_clean_target.cmake
[ 16%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ErrBlock.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ErrBlock.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/ErrBlock.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/ErrBlock.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/adapter/ErrBlock.cpp
Creating destination directory: "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/"
[ 16%] Building CXX object libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/ReferenceBlob.cpp.o
/usr/bin/ar qc ../../ilib/libkxml.a CMakeFiles/kxml.dir/xml.c.o "CMakeFiles/kxml.dir/xtoc-parsexml.c.o" CMakeFiles/kxml.dir/xtoc.c.o
/usr/bin/ranlib ../../ilib/libkxml.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/ReferenceBlob.cpp.o -MF CMakeFiles/ngs-vdb.dir/ReferenceBlob.cpp.o.d -o CMakeFiles/ngs-vdb.dir/ReferenceBlob.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/ReferenceBlob.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-disp.dir/link.txt --verbose=1
[ 16%] Built target kxml
make  -f libs/general-writer/CMakeFiles/general-writer.dir/build.make libs/general-writer/CMakeFiles/general-writer.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/general-writer /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/general-writer /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/general-writer/CMakeFiles/general-writer.dir/DependInfo.cmake "--color="
Building index for all the packages and classes...
[ 16%] Building CXX object libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/ReferenceBlobIterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/ReferenceBlobIterator.cpp.o -MF CMakeFiles/ngs-vdb.dir/ReferenceBlobIterator.cpp.o.d -o CMakeFiles/ngs-vdb.dir/ReferenceBlobIterator.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/ReferenceBlobIterator.cpp
/usr/bin/ar qc ../../../ilib/libngs-disp.a "CMakeFiles/ngs-disp.dir/ReadCollectionItf.cpp.o" "CMakeFiles/ngs-disp.dir/ReferenceItf.cpp.o" "CMakeFiles/ngs-disp.dir/ReferenceSequenceItf.cpp.o" "CMakeFiles/ngs-disp.dir/PileupItf.cpp.o" "CMakeFiles/ngs-disp.dir/PileupEventItf.cpp.o" "CMakeFiles/ngs-disp.dir/AlignmentItf.cpp.o" "CMakeFiles/ngs-disp.dir/ReadGroupItf.cpp.o" "CMakeFiles/ngs-disp.dir/ReadItf.cpp.o" "CMakeFiles/ngs-disp.dir/FragmentItf.cpp.o" "CMakeFiles/ngs-disp.dir/StatisticsItf.cpp.o" "CMakeFiles/ngs-disp.dir/PackageItf.cpp.o" "CMakeFiles/ngs-disp.dir/StringItf.cpp.o" "CMakeFiles/ngs-disp.dir/Refcount.cpp.o" "CMakeFiles/ngs-disp.dir/VTable.cpp.o" "CMakeFiles/ngs-disp.dir/ErrBlock.cpp.o" "CMakeFiles/ngs-disp.dir/ErrorMsg.cpp.o"
/usr/bin/ranlib ../../../ilib/libngs-disp.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
Standard Doclet version 21.0.6-ea+6-Debian-1
Building tree for all the packages and classes...
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/general-writer/CMakeFiles/general-writer.dir/build.make libs/general-writer/CMakeFiles/general-writer.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 16%] Built target ngs-disp
make  -f tools/external/vdb-config/tui/CMakeFiles/tui_cpp.dir/build.make tools/external/vdb-config/tui/CMakeFiles/tui_cpp.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui/CMakeFiles/tui_cpp.dir/DependInfo.cmake "--color="
[ 16%] Building CXX object libs/general-writer/CMakeFiles/general-writer.dir/general-writer.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/general-writer && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT libs/general-writer/CMakeFiles/general-writer.dir/general-writer.cpp.o -MF CMakeFiles/general-writer.dir/general-writer.cpp.o.d -o CMakeFiles/general-writer.dir/general-writer.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/general-writer/general-writer.cpp
[ 16%] Building C object libs/loader/CMakeFiles/loader.dir/reference-writer.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -D__mod__=\"libs/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/loader/CMakeFiles/loader.dir/reference-writer.c.o -MF CMakeFiles/loader.dir/reference-writer.c.o.d -o CMakeFiles/loader.dir/reference-writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/loader/reference-writer.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/vdb-config/tui/CMakeFiles/tui_cpp.dir/build.make tools/external/vdb-config/tui/CMakeFiles/tui_cpp.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/Alignment.html...
[ 16%] Building CXX object tools/external/vdb-config/tui/CMakeFiles/tui_cpp.dir/tui_cpp.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui_cpp.dir/tui_cpp.cpp.o -MF CMakeFiles/tui_cpp.dir/tui_cpp.cpp.o.d -o CMakeFiles/tui_cpp.dir/tui_cpp.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/tui_cpp.cpp
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Alignment.java:140: warning: no comment
    static int all                = primaryAlignment | secondaryAlignment;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Alignment.java:176: warning: no comment
    static int clipLeft  = 0;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Alignment.java:177: warning: no comment
    static int clipRight = 1;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Alignment.java:132: warning: no comment
    static int maxMapQuality = 8;      // pass alignments with mappingQuality <= param
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Alignment.java:131: warning: no comment
    static int minMapQuality = 4;      // pass alignments with mappingQuality >= param
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Alignment.java:133: warning: no comment
[ 16%] Linking CXX static library ../../../ilib/libngs-adapt-c++.a
    static int noWraparound = 16;      // do not include leading wrapped around alignments to circular references
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Alignment.java:130: warning: no comment
    static int passDuplicates = 2;     // either a PCR or optical duplicate
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Alignment.java:129: warning: no comment
    static int passFailed = 1;         // reads rejected due to platform/vendor quality criteria
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Alignment.java:138: warning: no comment
    static int primaryAlignment   = 1;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Alignment.java:139: warning: no comment
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/cmake -P CMakeFiles/ngs-adapt-c++.dir/cmake_clean_target.cmake
    static int secondaryAlignment = 2;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Alignment.java:134: warning: no comment
    static int startWithinSlice = 32;  // change slice intersection criteria so that start pos is within slice
               ^
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-adapt-c++.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../ilib/libngs-adapt-c++.a "CMakeFiles/ngs-adapt-c++.dir/ReadCollectionItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/PileupItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/PileupEventItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/ReferenceItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/ReferenceSequenceItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/AlignmentItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/ReadGroupItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/ReadItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/FragmentItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/StatisticsItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/StringItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/Refcount.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/ErrorMsg.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/ErrBlock.cpp.o"
/usr/bin/ranlib ../../../ilib/libngs-adapt-c++.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 17%] Building C object libs/loader/CMakeFiles/loader.dir/sequence-writer.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -D__mod__=\"libs/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/loader/CMakeFiles/loader.dir/sequence-writer.c.o -MF CMakeFiles/loader.dir/sequence-writer.c.o.d -o CMakeFiles/loader.dir/sequence-writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/loader/sequence-writer.c
[ 17%] Building CXX object libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/VdbAlignment.cpp.o
[ 17%] Built target ngs-adapt-c++
make  -f tools/external/vdb-config/tui/CMakeFiles/tui.dir/build.make tools/external/vdb-config/tui/CMakeFiles/tui.dir/depend
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/VdbAlignment.cpp.o -MF CMakeFiles/ngs-vdb.dir/VdbAlignment.cpp.o.d -o CMakeFiles/ngs-vdb.dir/VdbAlignment.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/VdbAlignment.cpp
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui/CMakeFiles/tui.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/vdb-config/tui/CMakeFiles/tui.dir/build.make tools/external/vdb-config/tui/CMakeFiles/tui.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 18%] Linking CXX executable ../../../test-bin/ngs-makedb
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-makedb.dir/link.txt --verbose=1
[ 19%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/dir_dlg.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/dir_dlg.c.o -MF CMakeFiles/tui.dir/dir_dlg.c.o.d -o CMakeFiles/tui.dir/dir_dlg.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/dir_dlg.c
[ 19%] Building CXX object libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/NGS-VDB.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/NGS-VDB.cpp.o -MF CMakeFiles/ngs-vdb.dir/NGS-VDB.cpp.o.d -o CMakeFiles/ngs-vdb.dir/NGS-VDB.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/NGS-VDB.cpp
[ 19%] Building C object libs/ascp/CMakeFiles/ascp.dir/unix/connect.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ascp && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -D__mod__=\"libs/ascp\" -Darm64 -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ascp -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -Wno-unused-result -MD -MT libs/ascp/CMakeFiles/ascp.dir/unix/connect.c.o -MF CMakeFiles/ascp.dir/unix/connect.c.o.d -o CMakeFiles/ascp.dir/unix/connect.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ascp/unix/connect.c
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/AlignmentIterator.html...
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/ErrorMsg.html...
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/ErrorMsg.java:38: warning: no main description
     * @return What went wrong
       ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/ErrorMsg.java:49: warning: no comment
    public ErrorMsg ()
           ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/ErrorMsg.java:53: warning: no comment
    public ErrorMsg ( String message )
           ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/ErrorMsg.java:58: warning: no comment
    public ErrorMsg ( ErrorMsg obj )
           ^
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/Fragment.html...
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/FragmentIterator.html...
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/ngs-makedb.dir/link.d "CMakeFiles/ngs-makedb.dir/ngstest_makedb.cpp.o" -o ../../../test-bin/ngs-makedb  -Wl,-Bstatic -lktst -lkapp -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/gov/nih/nlm/ncbi/ngs/LibDependencies.html...
[ 20%] Building C object libs/ascp/CMakeFiles/ascp.dir/linux/ascp-path.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ascp && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -D__mod__=\"libs/ascp\" -Darm64 -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ascp -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/ascp/CMakeFiles/ascp.dir/linux/ascp-path.c.o -MF CMakeFiles/ascp.dir/linux/ascp-path.c.o.d -o CMakeFiles/ascp.dir/linux/ascp-path.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ascp/linux/ascp-path.c
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/gov/nih/nlm/ncbi/ngs/LibDependencies.java:29: warning: no comment
public class LibDependencies {
       ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/gov/nih/nlm/ncbi/ngs/LibDependencies.java:34: warning: no comment
    public final static String NCBI_VDB = "ncbi-ngs";
                               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/gov/nih/nlm/ncbi/ngs/LibDependencies.java:30: warning: no comment
    public final static String NGS_SDK  = "ngs-sdk";
                               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/gov/nih/nlm/ncbi/ngs/LibDependencies.java:29: warning: use of default constructor, which does not provide a comment
public class LibDependencies {
       ^
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/gov/nih/nlm/ncbi/ngs/NGS.html...
[ 20%] Built target ngs-makedb
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/gov/nih/nlm/ncbi/ngs/NGS.java:40: warning: no comment
public class NGS
       ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/gov/nih/nlm/ncbi/ngs/NGS.java:40: warning: use of default constructor, which does not provide a comment
[ 20%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/eventring.c.o
public class NGS
       ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/gov/nih/nlm/ncbi/ngs/NGS.java:133: warning: no comment
    public static void main(String[] args) {
                       ^
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/eventring.c.o -MF CMakeFiles/tui.dir/eventring.c.o.d -o CMakeFiles/tui.dir/eventring.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/eventring.c
make  -f tools/external/sra-dump/CMakeFiles/fastq-dump.dir/build.make tools/external/sra-dump/CMakeFiles/fastq-dump.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump/CMakeFiles/fastq-dump.dir/DependInfo.cmake "--color="
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/Package.html...
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Package.java:37: warning: no main description
     * @return package version as a 1..3 part string
       ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Package.java:33: warning: use of default constructor, which does not provide a comment
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/sra-dump/CMakeFiles/fastq-dump.dir/build.make tools/external/sra-dump/CMakeFiles/fastq-dump.dir/build
public class Package
       ^
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/Pileup.html...
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Pileup.java:58: warning: no main description
     * @return base at current Reference position
       ^
[ 20%] Building C object tools/external/sra-dump/CMakeFiles/fastq-dump.dir/factory.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/fastq-dump.dir/factory.c.o -MF CMakeFiles/fastq-dump.dir/factory.c.o.d -o CMakeFiles/fastq-dump.dir/factory.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/factory.c
[ 20%] Building C object tools/external/sra-dump/CMakeFiles/fastq-dump.dir/fasta_dump.c.o
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/PileupEvent.html...
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/PileupEvent.java:118: warning: no comment
    static int alignment_minus_strand    = 0x20;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/PileupEvent.java:116: warning: no comment
    static int alignment_start           = 0x80;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/PileupEvent.java:117: warning: no comment
    static int alignment_stop            = 0x40;
               ^
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/fastq-dump.dir/fasta_dump.c.o -MF CMakeFiles/fastq-dump.dir/fasta_dump.c.o.d -o CMakeFiles/fastq-dump.dir/fasta_dump.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/fasta_dump.c
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/PileupEvent.java:98: warning: no comment
    static int deletion                  = 2;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/PileupEvent.java:104: warning: no comment
    static int insertion                 = 0x08;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/PileupEvent.java:112: warning: no comment
    static int insertion_before_deletion = insertion | deletion;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/PileupEvent.java:107: warning: no comment
    static int insertion_before_match    = insertion | match;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/PileupEvent.java:108: warning: no comment
    static int insertion_before_mismatch = insertion | mismatch;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/PileupEvent.java:180: warning: no comment
    static int intron_minus              = 2;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/PileupEvent.java:179: warning: no comment
    static int intron_plus               = 1;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/PileupEvent.java:181: warning: no comment
    static int intron_unknown            = 3;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/PileupEvent.java:97: warning: no comment
    static int mismatch                  = 1;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/PileupEvent.java:191: warning: no comment
    static int read_gap                  = 5;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/PileupEvent.java:186: warning: no comment
    static int read_overlap              = 4;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/PileupEvent.java:113: warning: no comment
    static int replacement               = insertion_before_deletion;
               ^
[ 20%] Building C object libs/vdb-sqlite/CMakeFiles/vdb-sqlite.dir/sqlite3vdb.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/vdb-sqlite && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -D__mod__=\"libs/vdb-sqlite\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/vdb-sqlite/CMakeFiles/vdb-sqlite.dir/sqlite3vdb.c.o -MF CMakeFiles/vdb-sqlite.dir/sqlite3vdb.c.o.d -o CMakeFiles/vdb-sqlite.dir/sqlite3vdb.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/vdb-sqlite/sqlite3vdb.c
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/PileupEventIterator.html...
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/PileupIterator.html...
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/Read.html...
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Read.java:35: warning: no comment
public interface Read
       ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Read.java:79: warning: no comment
    static int aligned          = fullyAligned | partiallyAligned;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Read.java:81: warning: no comment
    static int all              = aligned | unaligned;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Read.java:78: warning: no comment
    static int partiallyAligned = 2;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Read.java:80: warning: no comment
    static int unaligned        = 4;
               ^
[ 20%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/file_dlg.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/file_dlg.c.o -MF CMakeFiles/tui.dir/file_dlg.c.o.d -o CMakeFiles/tui.dir/file_dlg.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/file_dlg.c
[ 20%] Linking CXX static library ../../ilib/libngs-vdb.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb && /usr/bin/cmake -P CMakeFiles/ngs-vdb.dir/cmake_clean_target.cmake
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/ReadCollection.html...
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/ReadCollection.java:88: warning: no main description
     * @param spec the name of a contained read group    
       ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/ReadCollection.java:121: warning: no main description
     * @param spec the name of a contained Reference
       ^
[ 20%] Linking C static library ../../ilib/libascp.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ascp && /usr/bin/cmake -P CMakeFiles/ascp.dir/cmake_clean_target.cmake
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-vdb.dir/link.txt --verbose=1
[ 20%] Linking CXX static library ../../../../ilib/libtui_cpp.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ascp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ascp.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cmake -P CMakeFiles/tui_cpp.dir/cmake_clean_target.cmake
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/ReadGroup.html...
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/ReadGroupIterator.html...
/usr/bin/ar qc ../../ilib/libngs-vdb.a "CMakeFiles/ngs-vdb.dir/VdbReadCollection.cpp.o" "CMakeFiles/ngs-vdb.dir/FragmentBlobIterator.cpp.o" "CMakeFiles/ngs-vdb.dir/FragmentBlob.cpp.o" "CMakeFiles/ngs-vdb.dir/VdbReference.cpp.o" "CMakeFiles/ngs-vdb.dir/ReferenceBlob.cpp.o" "CMakeFiles/ngs-vdb.dir/ReferenceBlobIterator.cpp.o" "CMakeFiles/ngs-vdb.dir/VdbAlignment.cpp.o" "CMakeFiles/ngs-vdb.dir/NGS-VDB.cpp.o"
/usr/bin/ranlib ../../ilib/libngs-vdb.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 20%] Linking C static library ../../ilib/libloader.a
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/ReadIterator.html...
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cmake -P CMakeFiles/loader.dir/cmake_clean_target.cmake
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/ReadIterator.java:34: warning: no comment
public interface ReadIterator
       ^
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/loader.dir/link.txt --verbose=1
make  -f tools/external/sra-dump/CMakeFiles/sff-dump.dir/build.make tools/external/sra-dump/CMakeFiles/sff-dump.dir/depend
/usr/bin/ar qc ../../ilib/libascp.a CMakeFiles/ascp.dir/ascp.c.o CMakeFiles/ascp.dir/unix/connect.c.o "CMakeFiles/ascp.dir/linux/ascp-path.c.o"
/usr/bin/ranlib ../../ilib/libascp.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cmake -E cmake_link_script CMakeFiles/tui_cpp.dir/link.txt --verbose=1
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/Reference.html...
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump/CMakeFiles/sff-dump.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 20%] Built target ngs-vdb
make  -f tools/external/sra-dump/CMakeFiles/illumina-dump.dir/build.make tools/external/sra-dump/CMakeFiles/illumina-dump.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump/CMakeFiles/illumina-dump.dir/DependInfo.cmake "--color="
[ 20%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/line_policy.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/line_policy.c.o -MF CMakeFiles/tui.dir/line_policy.c.o.d -o CMakeFiles/tui.dir/line_policy.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/line_policy.c
[ 20%] Built target ascp
make  -f tools/external/sra-dump/CMakeFiles/abi-dump.dir/build.make tools/external/sra-dump/CMakeFiles/abi-dump.dir/depend
/usr/bin/ar qc ../../ilib/libloader.a CMakeFiles/loader.dir/progressbar.c.o "CMakeFiles/loader.dir/loader-file.c.o" "CMakeFiles/loader.dir/loader-meta.c.o" "CMakeFiles/loader.dir/queue-file.c.o" "CMakeFiles/loader.dir/alignment-writer.c.o" "CMakeFiles/loader.dir/common-reader.c.o" "CMakeFiles/loader.dir/common-writer.c.o" CMakeFiles/loader.dir/mmarray.c.o "CMakeFiles/loader.dir/reference-writer.c.o" "CMakeFiles/loader.dir/sequence-writer.c.o"
/usr/bin/ranlib ../../ilib/libloader.a
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump/CMakeFiles/abi-dump.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/usr/bin/ar qc ../../../../ilib/libtui_cpp.a CMakeFiles/tui_cpp.dir/tui_cpp.cpp.o
/usr/bin/ranlib ../../../../ilib/libtui_cpp.a
make  -f tools/external/sra-dump/CMakeFiles/sff-dump.dir/build.make tools/external/sra-dump/CMakeFiles/sff-dump.dir/build
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/ReferenceIterator.html...
[ 20%] Built target loader
make  -f tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/build.make tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/depend
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/ReferenceSequence.html...
[ 20%] Building C object tools/external/sra-dump/CMakeFiles/sff-dump.dir/factory.c.o
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/DependInfo.cmake "--color="
[ 20%] Built target tui_cpp
make  -f tools/external/sra-dump/CMakeFiles/illumina-dump.dir/build.make tools/external/sra-dump/CMakeFiles/illumina-dump.dir/build
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/sff-dump.dir/factory.c.o -MF CMakeFiles/sff-dump.dir/factory.c.o.d -o CMakeFiles/sff-dump.dir/factory.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/factory.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/sra-dump/CMakeFiles/abi-dump.dir/build.make tools/external/sra-dump/CMakeFiles/abi-dump.dir/build
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/Statistics.html...
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Statistics.java:41: warning: no comment
make  -f tools/external/sra-pileup/CMakeFiles/sam-dump.dir/build.make tools/external/sra-pileup/CMakeFiles/sam-dump.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
    static int int64 = 2;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Statistics.java:43: warning: no comment
    static int real = 4;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Statistics.java:40: warning: no comment
    static int string = 1;
               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/ngs/Statistics.java:42: warning: no comment
    static int uint64 = 3;
               ^
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup/CMakeFiles/sam-dump.dir/DependInfo.cmake "--color="
[ 20%] Building C object tools/external/sra-dump/CMakeFiles/illumina-dump.dir/factory.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/illumina-dump.dir/factory.c.o -MF CMakeFiles/illumina-dump.dir/factory.c.o.d -o CMakeFiles/illumina-dump.dir/factory.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/factory.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/build.make tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/build
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/gov/nih/nlm/ncbi/ngs/package-summary.html...
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 20%] Building C object tools/external/sra-dump/CMakeFiles/abi-dump.dir/factory.c.o
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/gov/nih/nlm/ncbi/ngs/package-tree.html...
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/abi-dump.dir/factory.c.o -MF CMakeFiles/abi-dump.dir/factory.c.o.d -o CMakeFiles/abi-dump.dir/factory.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/factory.c
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/package-summary.html...
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/package-tree.html...
make  -f tools/external/sra-pileup/CMakeFiles/sam-dump.dir/build.make tools/external/sra-pileup/CMakeFiles/sam-dump.dir/build
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/constant-values.html...
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 21%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/dyn_string.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/dyn_string.c.o -MF CMakeFiles/sra-pileup.dir/dyn_string.c.o.d -o CMakeFiles/sra-pileup.dir/dyn_string.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/dyn_string.c
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/serialized-form.html...
[ 21%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/inputfiles.c.o
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/overview-tree.html...
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/inputfiles.c.o -MF CMakeFiles/sam-dump.dir/inputfiles.c.o.d -o CMakeFiles/sam-dump.dir/inputfiles.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/inputfiles.c
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/index.html...
Building index for all classes...
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/allclasses-index.html...
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/allpackages-index.html...
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/index-all.html...
[ 21%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/screen.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/screen.c.o -MF CMakeFiles/tui.dir/screen.c.o.d -o CMakeFiles/tui.dir/screen.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/screen.c
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/search.html...
[ 21%] Building C object tools/external/sra-dump/CMakeFiles/fastq-dump.dir/core.c.o
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/overview-summary.html...
Generating /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/help-doc.html...
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/fastq-dump.dir/core.c.o -MF CMakeFiles/fastq-dump.dir/core.c.o.d -o CMakeFiles/fastq-dump.dir/core.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/core.c
52 warnings
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/core.c: In function 'KMain':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/core.c:1011:23: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
 1011 |     ReportBuildDate ( __DATE__ );
      |                       ^~~~~~~~
[ 21%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/cmdline_cmn.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/cmdline_cmn.c.o -MF CMakeFiles/sra-pileup.dir/cmdline_cmn.c.o.d -o CMakeFiles/sra-pileup.dir/cmdline_cmn.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/cmdline_cmn.c
[ 21%] Built target ngs-doc_javadoc
[ 21%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/perf_log.c.o
make  -f tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/build.make tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/depend
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/perf_log.c.o -MF CMakeFiles/sam-dump.dir/perf_log.c.o.d -o CMakeFiles/sam-dump.dir/perf_log.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/perf_log.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/build.make tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 21%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/string_cache.c.o
[ 21%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/helper.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/string_cache.c.o -MF CMakeFiles/tui.dir/string_cache.c.o.d -o CMakeFiles/tui.dir/string_cache.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/string_cache.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/helper.c.o -MF CMakeFiles/fasterq-dump.dir/helper.c.o.d -o CMakeFiles/fasterq-dump.dir/helper.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/helper.c
[ 21%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/rna_splice_log.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/rna_splice_log.c.o -MF CMakeFiles/sam-dump.dir/rna_splice_log.c.o.d -o CMakeFiles/sam-dump.dir/rna_splice_log.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/rna_splice_log.c
[ 21%] Building C object tools/external/sra-dump/CMakeFiles/illumina-dump.dir/fasta_dump.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/illumina-dump.dir/fasta_dump.c.o -MF CMakeFiles/illumina-dump.dir/fasta_dump.c.o.d -o CMakeFiles/illumina-dump.dir/fasta_dump.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/fasta_dump.c
[ 21%] Building C object tools/external/sra-dump/CMakeFiles/sff-dump.dir/fasta_dump.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/sff-dump.dir/fasta_dump.c.o -MF CMakeFiles/sff-dump.dir/fasta_dump.c.o.d -o CMakeFiles/sff-dump.dir/fasta_dump.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/fasta_dump.c
[ 21%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/out_redir.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/out_redir.c.o -MF CMakeFiles/sra-pileup.dir/out_redir.c.o.d -o CMakeFiles/sra-pileup.dir/out_redir.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/out_redir.c
[ 21%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui.c.o -MF CMakeFiles/tui.dir/tui.c.o.d -o CMakeFiles/tui.dir/tui.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/tui.c
[ 21%] Building C object tools/external/sra-dump/CMakeFiles/abi-dump.dir/fasta_dump.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/abi-dump.dir/fasta_dump.c.o -MF CMakeFiles/abi-dump.dir/fasta_dump.c.o.d -o CMakeFiles/abi-dump.dir/fasta_dump.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/fasta_dump.c
[ 21%] Building C object libs/general-writer/CMakeFiles/general-writer.dir/utf8-like-int-codec.c.o
[ 21%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-dump-opts.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/general-writer && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/general-writer/CMakeFiles/general-writer.dir/utf8-like-int-codec.c.o -MF CMakeFiles/general-writer.dir/utf8-like-int-codec.c.o.d -o CMakeFiles/general-writer.dir/utf8-like-int-codec.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/general-writer/utf8-like-int-codec.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-dump-opts.c.o -MF CMakeFiles/sam-dump.dir/sam-dump-opts.c.o.d -o CMakeFiles/sam-dump.dir/sam-dump-opts.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/sam-dump-opts.c
[ 21%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/perf_log.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/perf_log.c.o -MF CMakeFiles/sra-pileup.dir/perf_log.c.o.d -o CMakeFiles/sra-pileup.dir/perf_log.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/perf_log.c
[ 21%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_dlg.c.o
[ 21%] Building C object libs/diagnose/CMakeFiles/diagnose.dir/endpoint.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_dlg.c.o -MF CMakeFiles/tui.dir/tui_dlg.c.o.d -o CMakeFiles/tui.dir/tui_dlg.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/tui_dlg.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/diagnose && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -D__mod__=\"libs/ascp\" -Darm64 -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/diagnose -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/diagnose/CMakeFiles/diagnose.dir/endpoint.c.o -MF CMakeFiles/diagnose.dir/endpoint.c.o.d -o CMakeFiles/diagnose.dir/endpoint.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/diagnose/endpoint.c
[ 21%] Linking CXX static library ../../ilib/libgeneral-writer.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/general-writer && /usr/bin/cmake -P CMakeFiles/general-writer.dir/cmake_clean_target.cmake
[ 21%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/arg_helper.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/arg_helper.c.o -MF CMakeFiles/fasterq-dump.dir/arg_helper.c.o.d -o CMakeFiles/fasterq-dump.dir/arg_helper.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/arg_helper.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/general-writer && /usr/bin/cmake -E cmake_link_script CMakeFiles/general-writer.dir/link.txt --verbose=1
[ 21%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_dlg_helper.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_dlg_helper.c.o -MF CMakeFiles/tui.dir/tui_dlg_helper.c.o.d -o CMakeFiles/tui.dir/tui_dlg_helper.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/tui_dlg_helper.c
[ 21%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/reref.c.o
/usr/bin/ar qc ../../ilib/libgeneral-writer.a "CMakeFiles/general-writer.dir/general-writer.cpp.o" "CMakeFiles/general-writer.dir/utf8-like-int-codec.c.o"
/usr/bin/ranlib ../../ilib/libgeneral-writer.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/reref.c.o -MF CMakeFiles/sra-pileup.dir/reref.c.o.d -o CMakeFiles/sra-pileup.dir/reref.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/reref.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 21%] Building C object tools/external/sra-dump/CMakeFiles/illumina-dump.dir/core.c.o
[ 21%] Linking C static library ../../ilib/libdiagnose.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/illumina-dump.dir/core.c.o -MF CMakeFiles/illumina-dump.dir/core.c.o.d -o CMakeFiles/illumina-dump.dir/core.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/core.c
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/diagnose && /usr/bin/cmake -P CMakeFiles/diagnose.dir/cmake_clean_target.cmake
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/sff-dump.dir/core.c.o -MF CMakeFiles/sff-dump.dir/core.c.o.d -o CMakeFiles/sff-dump.dir/core.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/core.c
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/diagnose && /usr/bin/cmake -E cmake_link_script CMakeFiles/diagnose.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/abi-dump.dir/core.c.o -MF CMakeFiles/abi-dump.dir/core.c.o.d -o CMakeFiles/abi-dump.dir/core.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/core.c
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/core.c: In function 'KMain':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/core.c:1011:23: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
 1011 |     ReportBuildDate ( __DATE__ );
      |                       ^~~~~~~~
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/usr/bin/ar qc ../../ilib/libdiagnose.a CMakeFiles/diagnose.dir/diagnose.c.o CMakeFiles/diagnose.dir/endpoint.c.o
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/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/core.c: In function 'KMain':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/core.c:1011:23: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
 1011 |     ReportBuildDate ( __DATE__ );
      |                       ^~~~~~~~
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-validate /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-validate /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-validate/CMakeFiles/vdb-validate.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_menu.c.o -MF CMakeFiles/tui.dir/tui_menu.c.o.d -o CMakeFiles/tui.dir/tui_menu.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/tui_menu.c
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/core.c: In function 'KMain':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/core.c:1011:23: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
 1011 |     ReportBuildDate ( __DATE__ );
      |                       ^~~~~~~~
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-validate && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-validate\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-validate/CMakeFiles/vdb-validate.dir/main.c.o -MF CMakeFiles/vdb-validate.dir/main.c.o.d -o CMakeFiles/vdb-validate.dir/main.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-validate/main.c
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/tool_ctx.c.o -MF CMakeFiles/fasterq-dump.dir/tool_ctx.c.o.d -o CMakeFiles/fasterq-dump.dir/tool_ctx.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/tool_ctx.c
[ 22%] Building C object tools/external/sra-dump/CMakeFiles/fastq-dump.dir/fastq.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/fastq-dump.dir/fastq.c.o -MF CMakeFiles/fastq-dump.dir/fastq.c.o.d -o CMakeFiles/fastq-dump.dir/fastq.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/fastq.c
[ 22%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/cg_tools.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/cg_tools.c.o -MF CMakeFiles/sra-pileup.dir/cg_tools.c.o.d -o CMakeFiles/sra-pileup.dir/cg_tools.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/cg_tools.c
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/tool_ctx.c: In function 'tctx_extract_short_accession':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/tool_ctx.c:348:22: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  348 |     ReportBuildDate( __DATE__ );
      |                      ^~~~~~~~
[ 22%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/out_redir.c.o
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-validate && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-validate\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-validate/CMakeFiles/vdb-validate.dir/vdb-validate.c.o -MF CMakeFiles/vdb-validate.dir/vdb-validate.c.o.d -o CMakeFiles/vdb-validate.dir/vdb-validate.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-validate/vdb-validate.c
[ 22%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_palette.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_palette.c.o -MF CMakeFiles/tui.dir/tui_palette.c.o.d -o CMakeFiles/tui.dir/tui_palette.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/tui_palette.c
[ 22%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_std_dlg.c.o
[ 22%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-coldefs.c.o
[ 23%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-hdr.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-coldefs.c.o -MF CMakeFiles/vdb-dump.dir/vdb-dump-coldefs.c.o.d -o CMakeFiles/vdb-dump.dir/vdb-dump-coldefs.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump/vdb-dump-coldefs.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-hdr.c.o -MF CMakeFiles/sam-dump.dir/sam-hdr.c.o.d -o CMakeFiles/sam-dump.dir/sam-hdr.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/sam-hdr.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_std_dlg.c.o -MF CMakeFiles/tui.dir/tui_std_dlg.c.o.d -o CMakeFiles/tui.dir/tui_std_dlg.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/tui_std_dlg.c
[ 23%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/inspector.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/inspector.c.o -MF CMakeFiles/fasterq-dump.dir/inspector.c.o.d -o CMakeFiles/fasterq-dump.dir/inspector.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/inspector.c
[ 23%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/report_deletes.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/report_deletes.c.o -MF CMakeFiles/sra-pileup.dir/report_deletes.c.o.d -o CMakeFiles/sra-pileup.dir/report_deletes.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/report_deletes.c
[ 23%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget.c.o -MF CMakeFiles/tui.dir/tui_widget.c.o.d -o CMakeFiles/tui.dir/tui_widget.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/tui_widget.c
[ 23%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-hdr1.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-hdr1.c.o -MF CMakeFiles/sam-dump.dir/sam-hdr1.c.o.d -o CMakeFiles/sam-dump.dir/sam-hdr1.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/sam-hdr1.c
[ 23%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/ref_regions.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/ref_regions.c.o -MF CMakeFiles/sra-pileup.dir/ref_regions.c.o.d -o CMakeFiles/sra-pileup.dir/ref_regions.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/ref_regions.c
[ 23%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-tools.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-tools.c.o -MF CMakeFiles/vdb-dump.dir/vdb-dump-tools.c.o.d -o CMakeFiles/vdb-dump.dir/vdb-dump-tools.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump/vdb-dump-tools.c
[ 23%] Building C object tools/external/sra-dump/CMakeFiles/illumina-dump.dir/illumina.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/illumina-dump.dir/illumina.c.o -MF CMakeFiles/illumina-dump.dir/illumina.c.o.d -o CMakeFiles/illumina-dump.dir/illumina.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/illumina.c
make  -f tools/external/vdb-validate/CMakeFiles/check-corrupt.dir/build.make tools/external/vdb-validate/CMakeFiles/check-corrupt.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-validate /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-validate /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-validate/CMakeFiles/check-corrupt.dir/DependInfo.cmake "--color="
[ 23%] Building C object tools/external/sra-dump/CMakeFiles/abi-dump.dir/abi.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/abi-dump.dir/abi.c.o -MF CMakeFiles/abi-dump.dir/abi.c.o.d -o CMakeFiles/abi-dump.dir/abi.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/abi.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/vdb-validate/CMakeFiles/check-corrupt.dir/build.make tools/external/vdb-validate/CMakeFiles/check-corrupt.dir/build
[ 23%] Building C object tools/external/sra-dump/CMakeFiles/sff-dump.dir/sff.c.o
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/sff-dump.dir/sff.c.o -MF CMakeFiles/sff-dump.dir/sff.c.o.d -o CMakeFiles/sff-dump.dir/sff.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-dump/sff.c
[ 23%] Building CXX object tools/external/vdb-validate/CMakeFiles/check-corrupt.dir/check-corrupt.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-validate && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-validate\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/vdb-validate/CMakeFiles/check-corrupt.dir/check-corrupt.cpp.o -MF CMakeFiles/check-corrupt.dir/check-corrupt.cpp.o.d -o CMakeFiles/check-corrupt.dir/check-corrupt.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-validate/check-corrupt.cpp
[ 23%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/4na_ascii.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/4na_ascii.c.o -MF CMakeFiles/sra-pileup.dir/4na_ascii.c.o.d -o CMakeFiles/sra-pileup.dir/4na_ascii.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/4na_ascii.c
[ 24%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/ref_walker_0.c.o
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[ 24%] Linking C executable ../../../bin/sff-dump
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cmake -E cmake_link_script CMakeFiles/sff-dump.dir/link.txt --verbose=1
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/inspector.c: In function 'insp_report':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/inspector.c:1165:14: warning: 'res' may be used uninitialized [-Wmaybe-uninitialized]
 1165 |         rc = KOutMsg( "... is %s\n", s_acc_type );
      |              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/inspector.c:248:18: note: 'res' was declared here
  248 |     const char * res;
      |                  ^~~
[ 24%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_button.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_button.c.o -MF CMakeFiles/tui.dir/tui_widget_button.c.o.d -o CMakeFiles/tui.dir/tui_widget_button.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/tui_widget_button.c
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cmake -E cmake_link_script CMakeFiles/illumina-dump.dir/link.txt --verbose=1
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/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sff-dump.dir/link.d "CMakeFiles/sff-dump.dir/factory.c.o" "CMakeFiles/sff-dump.dir/fasta_dump.c.o" "CMakeFiles/sff-dump.dir/core.c.o" "CMakeFiles/sff-dump.dir/sff.c.o" -o ../../../bin/sff-dump  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/matecache.c.o -MF CMakeFiles/sam-dump.dir/matecache.c.o.d -o CMakeFiles/sam-dump.dir/matecache.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/matecache.c
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/ref_walker.c.o -MF CMakeFiles/sra-pileup.dir/ref_walker.c.o.d -o CMakeFiles/sra-pileup.dir/ref_walker.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/ref_walker.c
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/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/illumina-dump.dir/link.d "CMakeFiles/illumina-dump.dir/factory.c.o" "CMakeFiles/illumina-dump.dir/fasta_dump.c.o" "CMakeFiles/illumina-dump.dir/core.c.o" "CMakeFiles/illumina-dump.dir/illumina.c.o" -o ../../../bin/illumina-dump  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
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/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/vdb-sqlite/sqlite3.c: In function 'sqlite3DefaultRowEst':
[ 24%] Linking C executable ../../../bin/fastq-dump
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/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/vdb-sqlite/sqlite3.c:102377:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
102377 |   if( pIdx->pPartIdxWhere!=0 ) a[0] -= 10;  assert( 10==sqlite3LogEst(2) );
       |   ^~
[ 25%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/err_msg.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/err_msg.c.o -MF CMakeFiles/fasterq-dump.dir/err_msg.c.o.d -o CMakeFiles/fasterq-dump.dir/err_msg.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/err_msg.c
[ 25%] Built target illumina-dump
[ 25%] Linking C executable ../../../bin/abi-dump
make  -f tools/external/vdb-decrypt/CMakeFiles/vdb-encrypt.dir/build.make tools/external/vdb-decrypt/CMakeFiles/vdb-encrypt.dir/depend
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cmake -E cmake_link_script CMakeFiles/abi-dump.dir/link.txt --verbose=1
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-decrypt /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-decrypt /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-decrypt/CMakeFiles/vdb-encrypt.dir/DependInfo.cmake "--color="
In file included from /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/vdb-sqlite/sqlite3.c:11540:
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/vdb-sqlite/sqlite3.c:102377:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
102377 |   if( pIdx->pPartIdxWhere!=0 ) a[0] -= 10;  assert( 10==sqlite3LogEst(2) );
       |                                             ^~~~~~
[ 25%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_grid.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_grid.c.o -MF CMakeFiles/tui.dir/tui_widget_grid.c.o.d -o CMakeFiles/tui.dir/tui_widget_grid.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/tui_widget_grid.c
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/vdb-sqlite/sqlite3.c:102378:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
102378 |   if( a[0]<33 ) a[0] = 33;                  assert( 33==sqlite3LogEst(10) );
       |   ^~
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/vdb-decrypt/CMakeFiles/vdb-encrypt.dir/build.make tools/external/vdb-decrypt/CMakeFiles/vdb-encrypt.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/fastq-dump.dir/link.d "CMakeFiles/fastq-dump.dir/factory.c.o" "CMakeFiles/fastq-dump.dir/fasta_dump.c.o" "CMakeFiles/fastq-dump.dir/core.c.o" "CMakeFiles/fastq-dump.dir/fastq.c.o" -o ../../../bin/fastq-dump  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
[ 25%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/read_fkt.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/read_fkt.c.o -MF CMakeFiles/sam-dump.dir/read_fkt.c.o.d -o CMakeFiles/sam-dump.dir/read_fkt.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/read_fkt.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f fastq-dump.3.0.9
[ 25%] Building C object tools/external/vdb-decrypt/CMakeFiles/vdb-encrypt.dir/vdb-encrypt.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-decrypt && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-decrypt\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-decrypt/CMakeFiles/vdb-encrypt.dir/vdb-encrypt.c.o -MF CMakeFiles/vdb-encrypt.dir/vdb-encrypt.c.o.d -o CMakeFiles/vdb-encrypt.dir/vdb-encrypt.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-decrypt/vdb-encrypt.c
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/vdb-sqlite/sqlite3.c:102378:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
102378 |   if( a[0]<33 ) a[0] = 33;                  assert( 33==sqlite3LogEst(10) );
       |                                             ^~~~~~
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv fastq-dump fastq-dump.3.0.9
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/abi-dump.dir/link.d "CMakeFiles/abi-dump.dir/factory.c.o" "CMakeFiles/abi-dump.dir/fasta_dump.c.o" "CMakeFiles/abi-dump.dir/core.c.o" "CMakeFiles/abi-dump.dir/abi.c.o" -o ../../../bin/abi-dump  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f abi-dump.3.0.9
[ 25%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/file_tools.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s fastq-dump.3.0.9 fastq-dump.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/file_tools.c.o -MF CMakeFiles/fasterq-dump.dir/file_tools.c.o.d -o CMakeFiles/fasterq-dump.dir/file_tools.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/file_tools.c
[ 25%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/walk_debug.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/walk_debug.c.o -MF CMakeFiles/sra-pileup.dir/walk_debug.c.o.d -o CMakeFiles/sra-pileup.dir/walk_debug.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/walk_debug.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv abi-dump abi-dump.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s fastq-dump.3 fastq-dump
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s abi-dump.3.0.9 abi-dump.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sratools.3.0.9 fastq-dump-driver
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s abi-dump.3 abi-dump
[ 25%] Building C object tools/external/vdb-decrypt/CMakeFiles/vdb-decrypt.dir/shared.c.o
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-decrypt && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-decrypt\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-decrypt/CMakeFiles/vdb-decrypt.dir/shared.c.o -MF CMakeFiles/vdb-decrypt.dir/shared.c.o.d -o CMakeFiles/vdb-decrypt.dir/shared.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-decrypt/shared.c
[ 25%] Built target fastq-dump
make  -f tools/external/srapath/CMakeFiles/srapath.dir/build.make tools/external/srapath/CMakeFiles/srapath.dir/depend
[ 25%] Built target abi-dump
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/srapath /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/srapath /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/srapath/CMakeFiles/srapath.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-stat /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-stat /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-stat/CMakeFiles/sra-stat.dir/DependInfo.cmake "--color="
[ 25%] Building C object tools/external/vdb-decrypt/CMakeFiles/vdb-encrypt.dir/shared.c.o
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-decrypt && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-decrypt\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-decrypt/CMakeFiles/vdb-encrypt.dir/shared.c.o -MF CMakeFiles/vdb-encrypt.dir/shared.c.o.d -o CMakeFiles/vdb-encrypt.dir/shared.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-decrypt/shared.c
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[ 25%] Building C object tools/external/srapath/CMakeFiles/srapath.dir/helper.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/srapath && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/srapath\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/srapath/CMakeFiles/srapath.dir/helper.c.o -MF CMakeFiles/srapath.dir/helper.c.o.d -o CMakeFiles/srapath.dir/helper.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/srapath/helper.c
[ 25%] Building C object tools/external/sra-stat/CMakeFiles/sra-stat.dir/assembly-statistics.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-stat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-stat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-stat/CMakeFiles/sra-stat.dir/assembly-statistics.c.o -MF CMakeFiles/sra-stat.dir/assembly-statistics.c.o.d -o CMakeFiles/sra-stat.dir/assembly-statistics.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-stat/assembly-statistics.c
[ 25%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/pileup_counters.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/pileup_counters.c.o -MF CMakeFiles/sra-pileup.dir/pileup_counters.c.o.d -o CMakeFiles/sra-pileup.dir/pileup_counters.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/pileup_counters.c
[ 25%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_inputline.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_inputline.c.o -MF CMakeFiles/tui.dir/tui_widget_inputline.c.o.d -o CMakeFiles/tui.dir/tui_widget_inputline.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/tui_widget_inputline.c
[ 25%] Building C object tools/external/vdb-validate/CMakeFiles/vdb-validate.dir/check-redact.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-validate && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-validate\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-validate/CMakeFiles/vdb-validate.dir/check-redact.c.o -MF CMakeFiles/vdb-validate.dir/check-redact.c.o.d -o CMakeFiles/vdb-validate.dir/check-redact.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-validate/check-redact.c
[ 25%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/var_fmt.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/var_fmt.c.o -MF CMakeFiles/fasterq-dump.dir/var_fmt.c.o.d -o CMakeFiles/fasterq-dump.dir/var_fmt.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/var_fmt.c
[ 25%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-aligned.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-aligned.c.o -MF CMakeFiles/sam-dump.dir/sam-aligned.c.o.d -o CMakeFiles/sam-dump.dir/sam-aligned.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/sam-aligned.c
[ 25%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_label.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_label.c.o -MF CMakeFiles/tui.dir/tui_widget_label.c.o.d -o CMakeFiles/tui.dir/tui_widget_label.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/tui_widget_label.c
[ 25%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/pileup_index.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/pileup_index.c.o -MF CMakeFiles/sra-pileup.dir/pileup_index.c.o.d -o CMakeFiles/sra-pileup.dir/pileup_index.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/pileup_index.c
[ 25%] Building C object tools/external/sra-stat/CMakeFiles/sra-stat.dir/sra.c.o
[ 25%] Linking CXX executable ../../../bin/check-corrupt
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-validate && /usr/bin/cmake -E cmake_link_script CMakeFiles/check-corrupt.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-stat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-stat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-stat/CMakeFiles/sra-stat.dir/sra.c.o -MF CMakeFiles/sra-stat.dir/sra.c.o.d -o CMakeFiles/sra-stat.dir/sra.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-stat/sra.c
[ 26%] Linking C executable ../../../bin/vdb-validate
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-validate && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-validate.dir/link.txt --verbose=1
[ 26%] Linking C executable ../../../bin/vdb-decrypt
[ 26%] Linking C executable ../../../bin/vdb-encrypt
[ 27%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_progress.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-decrypt && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-decrypt.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-decrypt && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-encrypt.dir/link.txt --verbose=1
[ 27%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/flex_printer.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_progress.c.o -MF CMakeFiles/tui.dir/tui_widget_progress.c.o.d -o CMakeFiles/tui.dir/tui_widget_progress.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/tui_widget_progress.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/flex_printer.c.o -MF CMakeFiles/fasterq-dump.dir/flex_printer.c.o.d -o CMakeFiles/fasterq-dump.dir/flex_printer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/flex_printer.c
[ 28%] Building C object tools/external/srapath/CMakeFiles/srapath.dir/line_iter.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/srapath && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/srapath\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/srapath/CMakeFiles/srapath.dir/line_iter.c.o -MF CMakeFiles/srapath.dir/line_iter.c.o.d -o CMakeFiles/srapath.dir/line_iter.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/srapath/line_iter.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-validate.dir/link.d "CMakeFiles/vdb-validate.dir/main.c.o" "CMakeFiles/vdb-validate.dir/vdb-validate.c.o" "CMakeFiles/vdb-validate.dir/check-redact.c.o" -o ../../../bin/vdb-validate  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f vdb-validate.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv vdb-validate vdb-validate.3.0.9
[ 28%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/pileup_indels.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-validate.3.0.9 vdb-validate.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/pileup_indels.c.o -MF CMakeFiles/sra-pileup.dir/pileup_indels.c.o.d -o CMakeFiles/sra-pileup.dir/pileup_indels.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/pileup_indels.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-validate.3 vdb-validate
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-decrypt.dir/link.d "CMakeFiles/vdb-decrypt.dir/vdb-decrypt.c.o" "CMakeFiles/vdb-decrypt.dir/shared.c.o" -o ../../../bin/vdb-decrypt  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f vdb-decrypt.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv vdb-decrypt vdb-decrypt.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-decrypt.3.0.9 vdb-decrypt.3
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make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-encrypt.dir/link.d "CMakeFiles/vdb-encrypt.dir/vdb-encrypt.c.o" "CMakeFiles/vdb-encrypt.dir/shared.c.o" -o ../../../bin/vdb-encrypt  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f vdb-encrypt.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv vdb-encrypt vdb-encrypt.3.0.9
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[ 28%] Building C object tools/external/srapath/CMakeFiles/srapath.dir/repository-mgr.c.o
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/srapath && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/srapath\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/srapath/CMakeFiles/srapath.dir/repository-mgr.c.o -MF CMakeFiles/srapath.dir/repository-mgr.c.o.d -o CMakeFiles/srapath.dir/repository-mgr.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/srapath/repository-mgr.c
[ 28%] Building C object tools/external/srapath/CMakeFiles/srapath.dir/services.c.o
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/check-corrupt.dir/link.d "CMakeFiles/check-corrupt.dir/check-corrupt.cpp.o" -o ../../../bin/check-corrupt  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f check-corrupt.3.0.9
[ 29%] Building C object tools/external/rcexplain/CMakeFiles/rcexplain.dir/rcexplain.c.o
[ 29%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_radiobox.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_radiobox.c.o -MF CMakeFiles/tui.dir/tui_widget_radiobox.c.o.d -o CMakeFiles/tui.dir/tui_widget_radiobox.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/tui_widget_radiobox.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/rcexplain && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/util\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/rcexplain/CMakeFiles/rcexplain.dir/rcexplain.c.o -MF CMakeFiles/rcexplain.dir/rcexplain.c.o.d -o CMakeFiles/rcexplain.dir/rcexplain.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/rcexplain/rcexplain.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/srapath && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/srapath\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/srapath/CMakeFiles/srapath.dir/services.c.o -MF CMakeFiles/srapath.dir/services.c.o.d -o CMakeFiles/srapath.dir/services.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/srapath/services.c
[ 29%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/pileup_varcount.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv check-corrupt check-corrupt.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/pileup_varcount.c.o -MF CMakeFiles/sra-pileup.dir/pileup_varcount.c.o.d -o CMakeFiles/sra-pileup.dir/pileup_varcount.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/pileup_varcount.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/kdbmeta/CMakeFiles/kdbmeta.dir/build.make tools/external/kdbmeta/CMakeFiles/kdbmeta.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s check-corrupt.3.0.9 check-corrupt.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s check-corrupt.3 check-corrupt
[ 29%] Building C object tools/external/kdbmeta/CMakeFiles/kdbmeta.dir/kdbmeta.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/kdbmeta && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/util\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/kdbmeta/CMakeFiles/kdbmeta.dir/kdbmeta.c.o -MF CMakeFiles/kdbmeta.dir/kdbmeta.c.o.d -o CMakeFiles/kdbmeta.dir/kdbmeta.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/kdbmeta/kdbmeta.c
[ 29%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/temp_dir.c.o
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 29%] Building C object tools/external/srapath/CMakeFiles/srapath.dir/cgi_request.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/srapath && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/srapath\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/srapath/CMakeFiles/srapath.dir/cgi_request.c.o -MF CMakeFiles/srapath.dir/cgi_request.c.o.d -o CMakeFiles/srapath.dir/cgi_request.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/srapath/cgi_request.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/temp_dir.c.o -MF CMakeFiles/fasterq-dump.dir/temp_dir.c.o.d -o CMakeFiles/fasterq-dump.dir/temp_dir.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/temp_dir.c
[ 29%] Building C object tools/external/sra-stat/CMakeFiles/sra-stat.dir/sra-stat.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-stat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-stat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-stat/CMakeFiles/sra-stat.dir/sra-stat.c.o -MF CMakeFiles/sra-stat.dir/sra-stat.c.o.d -o CMakeFiles/sra-stat.dir/sra-stat.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-stat/sra-stat.c
[ 29%] Built target check-corrupt
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[ 29%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_spin_edit.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_spin_edit.c.o -MF CMakeFiles/tui.dir/tui_widget_spin_edit.c.o.d -o CMakeFiles/tui.dir/tui_widget_spin_edit.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/tui_widget_spin_edit.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/progress_thread.c.o -MF CMakeFiles/fasterq-dump.dir/progress_thread.c.o.d -o CMakeFiles/fasterq-dump.dir/progress_thread.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/progress_thread.c
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/cleanup_task.c.o -MF CMakeFiles/fasterq-dump.dir/cleanup_task.c.o.d -o CMakeFiles/fasterq-dump.dir/cleanup_task.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/cleanup_task.c
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/test-sra && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/test-sra\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/test-sra/. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/test-sra/CMakeFiles/test-sra.dir/test-sra.c.o -MF CMakeFiles/test-sra.dir/test-sra.c.o.d -o CMakeFiles/test-sra.dir/test-sra.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/test-sra/test-sra.c
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[ 29%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-unaligned.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-unaligned.c.o -MF CMakeFiles/sam-dump.dir/sam-unaligned.c.o.d -o CMakeFiles/sam-dump.dir/sam-unaligned.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/sam-unaligned.c
[ 29%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/linux/systui.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/linux/systui.c.o -MF CMakeFiles/tui.dir/linux/systui.c.o.d -o CMakeFiles/tui.dir/linux/systui.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/tui/linux/systui.c
[ 29%] Building C object tools/external/cache-mgr/CMakeFiles/cache-mgr.dir/cache-mgr.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/cache-mgr && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/cache-mgr\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/cache-mgr/CMakeFiles/cache-mgr.dir/cache-mgr.c.o -MF CMakeFiles/cache-mgr.dir/cache-mgr.c.o.d -o CMakeFiles/cache-mgr.dir/cache-mgr.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/cache-mgr/cache-mgr.c
[ 30%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/sra-pileup.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/sra-pileup.c.o -MF CMakeFiles/sra-pileup.dir/sra-pileup.c.o.d -o CMakeFiles/sra-pileup.dir/sra-pileup.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/sra-pileup.c
[ 30%] Linking C executable ../../../bin/align-info
[ 30%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/index.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/index.c.o -MF CMakeFiles/fasterq-dump.dir/index.c.o.d -o CMakeFiles/fasterq-dump.dir/index.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/index.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/align-info && /usr/bin/cmake -E cmake_link_script CMakeFiles/align-info.dir/link.txt --verbose=1
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/sra-pileup.c: In function 'KMain':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/sra-pileup.c:1416:22: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
 1416 |     ReportBuildDate( __DATE__ );
      |                      ^~~~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/cache-mgr/cache-mgr.c: In function 'perform_report':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/cache-mgr/cache-mgr.c:702:16: warning: storing the address of local variable 'data' in '*octx.data' [-Wdangling-pointer=]
  702 |     octx->data = &data;
      |     ~~~~~~~~~~~^~~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/cache-mgr/cache-mgr.c:699:17: note: 'data' declared here
  699 |     report_data data;
      |                 ^~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/cache-mgr/cache-mgr.c:696:41: note: 'octx' declared here
  696 | static rc_t perform_report( visit_ctx * octx )
      |                             ~~~~~~~~~~~~^~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/cache-mgr/cache-mgr.c: In function 'perform_unlock':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/cache-mgr/cache-mgr.c:905:16: warning: storing the address of local variable 'data' in '*octx.data' [-Wdangling-pointer=]
  905 |     octx->data = &data;
      |     ~~~~~~~~~~~^~~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/cache-mgr/cache-mgr.c:902:17: note: 'data' declared here
  902 |     unlock_data data;
      |                 ^~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/cache-mgr/cache-mgr.c:899:41: note: 'octx' declared here
  899 | static rc_t perform_unlock( visit_ctx * octx )
      |                             ~~~~~~~~~~~~^~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/cache-mgr/cache-mgr.c: In function 'perform_clear':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/cache-mgr/cache-mgr.c:990:16: warning: storing the address of local variable 'data' in '*octx.data' [-Wdangling-pointer=]
  990 |     octx->data = &data;
      |     ~~~~~~~~~~~^~~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/cache-mgr/cache-mgr.c:987:16: note: 'data' declared here
  987 |     clear_data data;
      |                ^~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/cache-mgr/cache-mgr.c:984:40: note: 'octx' declared here
  984 | static rc_t perform_clear( visit_ctx * octx )
      |                            ~~~~~~~~~~~~^~~~
[ 31%] Linking C executable ../../../bin/kdbmeta
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/kdbmeta && /usr/bin/cmake -E cmake_link_script CMakeFiles/kdbmeta.dir/link.txt --verbose=1
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/align-info.dir/link.d "CMakeFiles/align-info.dir/align-info.c.o" -o ../../../bin/align-info  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f align-info.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv align-info align-info.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s align-info.3.0.9 align-info.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s align-info.3 align-info
[ 31%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/lookup_writer.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/lookup_writer.c.o -MF CMakeFiles/fasterq-dump.dir/lookup_writer.c.o.d -o CMakeFiles/fasterq-dump.dir/lookup_writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/lookup_writer.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 31%] Linking C executable ../../../bin/srapath
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/srapath && /usr/bin/cmake -E cmake_link_script CMakeFiles/srapath.dir/link.txt --verbose=1
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/kdbmeta.dir/link.d CMakeFiles/kdbmeta.dir/kdbmeta.c.o -o ../../../bin/kdbmeta  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
[ 31%] Built target align-info
[ 31%] Linking C static library ../../../../ilib/libtui.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f kdbmeta.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cmake -P CMakeFiles/tui.dir/cmake_clean_target.cmake
make  -f tools/external/driver-tool/CMakeFiles/sratools.dir/build.make tools/external/driver-tool/CMakeFiles/sratools.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool/CMakeFiles/sratools.dir/DependInfo.cmake "--color="
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make  -f tools/external/driver-tool/CMakeFiles/sratools.dir/build.make tools/external/driver-tool/CMakeFiles/sratools.dir/build
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cmake -E cmake_link_script CMakeFiles/tui.dir/link.txt --verbose=1
[ 31%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/sratools.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/sratools.cpp.o -MF CMakeFiles/sratools.dir/sratools.cpp.o.d -o CMakeFiles/sratools.dir/sratools.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/sratools.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s kdbmeta.3 kdbmeta
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/srapath.dir/link.d CMakeFiles/srapath.dir/helper.c.o CMakeFiles/srapath.dir/line_iter.c.o "CMakeFiles/srapath.dir/repository-mgr.c.o" CMakeFiles/srapath.dir/services.c.o CMakeFiles/srapath.dir/cgi_request.c.o CMakeFiles/srapath.dir/srapath.c.o -o ../../../bin/srapath  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f srapath.3.0.9
[ 31%] Built target kdbmeta
make  -f tools/external/sra-info/CMakeFiles/sra-info.dir/build.make tools/external/sra-info/CMakeFiles/sra-info.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-info /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-info /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-info/CMakeFiles/sra-info.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv srapath srapath.3.0.9
[ 32%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/lookup_reader.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/lookup_reader.c.o -MF CMakeFiles/fasterq-dump.dir/lookup_reader.c.o.d -o CMakeFiles/fasterq-dump.dir/lookup_reader.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/lookup_reader.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s srapath.3.0.9 srapath.3
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[ 32%] Building C object tools/loaders/bam-loader/CMakeFiles/samview.dir/bam.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/samview.dir/bam.c.o -MF CMakeFiles/samview.dir/bam.c.o.d -o CMakeFiles/samview.dir/bam.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/bam.c
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/locked_file_list.c.o -MF CMakeFiles/fasterq-dump.dir/locked_file_list.c.o.d -o CMakeFiles/fasterq-dump.dir/locked_file_list.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/locked_file_list.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f cache-mgr.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv cache-mgr cache-mgr.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s cache-mgr.3.0.9 cache-mgr.3
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-info && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-info\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-info/CMakeFiles/sra-info.dir/sra-info.cpp.o -MF CMakeFiles/sra-info.dir/sra-info.cpp.o.d -o CMakeFiles/sra-info.dir/sra-info.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-info/sra-info.cpp
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make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 33%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-helper.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-helper.c.o -MF CMakeFiles/vdb-dump.dir/vdb-dump-helper.c.o.d -o CMakeFiles/vdb-dump.dir/vdb-dump-helper.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump/vdb-dump-helper.c
[ 33%] Built target sra-pileup
make  -f tools/loaders/kar/CMakeFiles/kar.dir/build.make tools/loaders/kar/CMakeFiles/kar.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/kar /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar/CMakeFiles/kar.dir/DependInfo.cmake "--color="
[ 33%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/file_printer.c.o
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/kar/CMakeFiles/kar.dir/build.make tools/loaders/kar/CMakeFiles/kar.dir/build
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/file_printer.c.o -MF CMakeFiles/fasterq-dump.dir/file_printer.c.o.d -o CMakeFiles/fasterq-dump.dir/file_printer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/file_printer.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 33%] Building C object tools/loaders/bam-loader/CMakeFiles/bam-load.dir/bam.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/bam-load.dir/bam.c.o -MF CMakeFiles/bam-load.dir/bam.c.o.d -o CMakeFiles/bam-load.dir/bam.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/bam.c
[ 33%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/md_flag.c.o
[ 33%] Building C object tools/loaders/kar/CMakeFiles/kar.dir/kar-path.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/md_flag.c.o -MF CMakeFiles/sam-dump.dir/md_flag.c.o.d -o CMakeFiles/sam-dump.dir/md_flag.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/md_flag.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/kar\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/kar/CMakeFiles/kar.dir/kar-path.c.o -MF CMakeFiles/kar.dir/kar-path.c.o.d -o CMakeFiles/kar.dir/kar-path.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/kar/kar-path.c
In file included from /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/sratools.hpp:31,
                 from /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/sratools.cpp:59:
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/accession.hpp: In static member function 'static const char* sratools::Accession::qualityTypeFor(const char*)':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/accession.hpp:82:56: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                                                        ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/accession.hpp:82:38: note: the temporary was destroyed at the end of the full expression 'make_sequence<const char**>((& sratools::Accession::extensions[1]), 3)'
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                         ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 33%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/merge_sorter.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/merge_sorter.c.o -MF CMakeFiles/fasterq-dump.dir/merge_sorter.c.o.d -o CMakeFiles/fasterq-dump.dir/merge_sorter.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/merge_sorter.c
[ 33%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/cg_tools.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/cg_tools.c.o -MF CMakeFiles/sam-dump.dir/cg_tools.c.o.d -o CMakeFiles/sam-dump.dir/cg_tools.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/cg_tools.c
[ 33%] Building C object tools/loaders/kar/CMakeFiles/kar.dir/kar-args.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/kar\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/kar/CMakeFiles/kar.dir/kar-args.c.o -MF CMakeFiles/kar.dir/kar-args.c.o.d -o CMakeFiles/kar.dir/kar-args.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/kar/kar-args.c
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/bam.c: In function 'BAM_FileMakeAlignment':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/bam.c:1777:14: warning: '<unknown>' may be used uninitialized [-Wmaybe-uninitialized]
 1777 |         if (!BAM_AlignmentInit(y, rsltsize, datasize, &y->extra[numExtra]))
      |              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/bam.c:1697:13: note: by argument 4 of type 'const void * const' to 'BAM_AlignmentInit' declared here
 1697 | static bool BAM_AlignmentInit(BAM_Alignment *const self, unsigned const maxsize,
      |             ^~~~~~~~~~~~~~~~~
[ 33%] Building C object tools/loaders/kar/CMakeFiles/kar.dir/kar.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/kar\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/kar/CMakeFiles/kar.dir/kar.c.o -MF CMakeFiles/kar.dir/kar.c.o.d -o CMakeFiles/kar.dir/kar.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/kar/kar.c
[ 33%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-formats.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-formats.c.o -MF CMakeFiles/vdb-dump.dir/vdb-dump-formats.c.o.d -o CMakeFiles/vdb-dump.dir/vdb-dump-formats.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump/vdb-dump-formats.c
[ 33%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/sorter.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/sorter.c.o -MF CMakeFiles/fasterq-dump.dir/sorter.c.o.d -o CMakeFiles/fasterq-dump.dir/sorter.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/sorter.c
[ 33%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-dump.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-dump.c.o -MF CMakeFiles/sam-dump.dir/sam-dump.c.o.d -o CMakeFiles/sam-dump.dir/sam-dump.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/sam-dump.c
[ 33%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/cmn_iter.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/cmn_iter.c.o -MF CMakeFiles/fasterq-dump.dir/cmn_iter.c.o.d -o CMakeFiles/fasterq-dump.dir/cmn_iter.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/cmn_iter.c
[ 33%] Building C object tools/external/test-sra/CMakeFiles/test-sra.dir/unix/PrintOS.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/test-sra && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/test-sra\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/test-sra/. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/test-sra/CMakeFiles/test-sra.dir/unix/PrintOS.c.o -MF CMakeFiles/test-sra.dir/unix/PrintOS.c.o.d -o CMakeFiles/test-sra.dir/unix/PrintOS.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/test-sra/unix/PrintOS.c
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/sam-dump.c: In function 'SAM_Dump_Main':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/sam-dump.c:4387:22: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
 4387 |     ReportBuildDate( __DATE__ );
      |                      ^~~~~~~~
[ 33%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-redir.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-redir.c.o -MF CMakeFiles/vdb-dump.dir/vdb-dump-redir.c.o.d -o CMakeFiles/vdb-dump.dir/vdb-dump-redir.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump/vdb-dump-redir.c
[ 34%] Linking C executable ../../../bin/test-sra
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/test-sra && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-sra.dir/link.txt --verbose=1
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/bam.c: In function 'BAM_FileMakeAlignment':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/bam.c:1777:14: warning: '<unknown>' may be used uninitialized [-Wmaybe-uninitialized]
 1777 |         if (!BAM_AlignmentInit(y, rsltsize, datasize, &y->extra[numExtra]))
      |              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/bam.c:1697:13: note: by argument 4 of type 'const void * const' to 'BAM_AlignmentInit' declared here
 1697 | static bool BAM_AlignmentInit(BAM_Alignment *const self, unsigned const maxsize,
      |             ^~~~~~~~~~~~~~~~~
[ 34%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-fastq.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-fastq.c.o -MF CMakeFiles/vdb-dump.dir/vdb-dump-fastq.c.o.d -o CMakeFiles/vdb-dump.dir/vdb-dump-fastq.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump/vdb-dump-fastq.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-sra.dir/link.d "CMakeFiles/test-sra.dir/test-sra.c.o" "CMakeFiles/test-sra.dir/unix/PrintOS.c.o" -o ../../../bin/test-sra  ../../../ilib/libascp.a ../../../ilib/libdiagnose.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f test-sra.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv test-sra test-sra.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s test-sra.3.0.9 test-sra.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s test-sra.3 test-sra
[ 34%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/raw_read_iter.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/raw_read_iter.c.o -MF CMakeFiles/fasterq-dump.dir/raw_read_iter.c.o.d -o CMakeFiles/fasterq-dump.dir/raw_read_iter.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/raw_read_iter.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 34%] Building CXX object tools/external/sra-info/CMakeFiles/sra-info.dir/formatter.cpp.o
[ 34%] Linking C executable ../../../bin/kar
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-info && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-info\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-info/CMakeFiles/sra-info.dir/formatter.cpp.o -MF CMakeFiles/sra-info.dir/formatter.cpp.o.d -o CMakeFiles/sra-info.dir/formatter.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-info/formatter.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cmake -E cmake_link_script CMakeFiles/kar.dir/link.txt --verbose=1
[ 34%] Built target test-sra
make  -f tools/loaders/kar/CMakeFiles/kar+.dir/build.make tools/loaders/kar/CMakeFiles/kar+.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/kar /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar/CMakeFiles/kar+.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
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[ 34%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/special_iter.c.o
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 34%] Building C object tools/loaders/bam-loader/CMakeFiles/samview.dir/sam.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/special_iter.c.o -MF CMakeFiles/fasterq-dump.dir/special_iter.c.o.d -o CMakeFiles/fasterq-dump.dir/special_iter.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/special_iter.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/samview.dir/sam.c.o -MF CMakeFiles/samview.dir/sam.c.o.d -o CMakeFiles/samview.dir/sam.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/sam.c
[ 34%] Building C object tools/loaders/kar/CMakeFiles/kar+.dir/kar-path.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/kar\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/kar/CMakeFiles/kar+.dir/kar-path.c.o -MF CMakeFiles/kar+.dir/kar-path.c.o.d -o CMakeFiles/kar+.dir/kar-path.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/kar/kar-path.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/kar.dir/link.d "CMakeFiles/kar.dir/kar-path.c.o" "CMakeFiles/kar.dir/kar-args.c.o" CMakeFiles/kar.dir/kar.c.o -o ../../../bin/kar  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f kar.3.0.9
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make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 34%] Built target kar
make  -f tools/loaders/kar/CMakeFiles/kar+meta.dir/build.make tools/loaders/kar/CMakeFiles/kar+meta.dir/depend
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[ 35%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/fq_seq_ua_iter.c.o
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 35%] Building C object tools/loaders/kar/CMakeFiles/kar+meta.dir/kar+util.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/kar\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/kar/CMakeFiles/kar+meta.dir/kar+util.c.o -MF CMakeFiles/kar+meta.dir/kar+util.c.o.d -o CMakeFiles/kar+meta.dir/kar+util.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/kar/kar+util.c
[ 35%] Building C object tools/loaders/kar/CMakeFiles/kar+.dir/kar+args.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/kar\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/kar/CMakeFiles/kar+.dir/kar+args.c.o -MF CMakeFiles/kar+.dir/kar+args.c.o.d -o CMakeFiles/kar+.dir/kar+args.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/kar/kar+args.c
[ 35%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/fq_seq_csra_iter.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/fq_seq_csra_iter.c.o -MF CMakeFiles/fasterq-dump.dir/fq_seq_csra_iter.c.o.d -o CMakeFiles/fasterq-dump.dir/fq_seq_csra_iter.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/fq_seq_csra_iter.c
[ 35%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-view-spec.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-view-spec.c.o -MF CMakeFiles/vdb-dump.dir/vdb-dump-view-spec.c.o.d -o CMakeFiles/vdb-dump.dir/vdb-dump-view-spec.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump/vdb-dump-view-spec.c
[ 35%] Building C object tools/loaders/kar/CMakeFiles/kar+meta.dir/kar+meta.c.o
[ 35%] Building C object tools/loaders/kar/CMakeFiles/kar+.dir/kar+print.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/kar\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/kar/CMakeFiles/kar+meta.dir/kar+meta.c.o -MF CMakeFiles/kar+meta.dir/kar+meta.c.o.d -o CMakeFiles/kar+meta.dir/kar+meta.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/kar/kar+meta.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/kar\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/kar/CMakeFiles/kar+.dir/kar+print.c.o -MF CMakeFiles/kar+.dir/kar+print.c.o.d -o CMakeFiles/kar+.dir/kar+print.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/kar/kar+print.c
[ 35%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/align_iter.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/align_iter.c.o -MF CMakeFiles/fasterq-dump.dir/align_iter.c.o.d -o CMakeFiles/fasterq-dump.dir/align_iter.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/align_iter.c
[ 35%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/simple_fasta_iter.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/simple_fasta_iter.c.o -MF CMakeFiles/fasterq-dump.dir/simple_fasta_iter.c.o.d -o CMakeFiles/fasterq-dump.dir/simple_fasta_iter.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/simple_fasta_iter.c
[ 35%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/config.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/config.cpp.o -MF CMakeFiles/sratools.dir/config.cpp.o.d -o CMakeFiles/sratools.dir/config.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/config.cpp
[ 35%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-inspect.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-inspect.c.o -MF CMakeFiles/vdb-dump.dir/vdb-dump-inspect.c.o.d -o CMakeFiles/vdb-dump.dir/vdb-dump-inspect.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump/vdb-dump-inspect.c
[ 36%] Building C object tools/loaders/kar/CMakeFiles/kar+.dir/kar+util.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/kar\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/kar/CMakeFiles/kar+.dir/kar+util.c.o -MF CMakeFiles/kar+.dir/kar+util.c.o.d -o CMakeFiles/kar+.dir/kar+util.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/kar/kar+util.c
[ 36%] Building C object tools/loaders/bam-loader/CMakeFiles/bam-load.dir/sam.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/bam-load.dir/sam.c.o -MF CMakeFiles/bam-load.dir/sam.c.o.d -o CMakeFiles/bam-load.dir/sam.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/sam.c
[ 36%] Linking C executable ../../../bin/sra-stat
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-stat && /usr/bin/cmake -E cmake_link_script CMakeFiles/sra-stat.dir/link.txt --verbose=1
[ 36%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/db_join.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/db_join.c.o -MF CMakeFiles/fasterq-dump.dir/db_join.c.o.d -o CMakeFiles/fasterq-dump.dir/db_join.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/db_join.c
[ 36%] Building C object tools/loaders/bam-loader/CMakeFiles/samview.dir/samview.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/samview.dir/samview.c.o -MF CMakeFiles/samview.dir/samview.c.o.d -o CMakeFiles/samview.dir/samview.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/samview.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sra-stat.dir/link.d "CMakeFiles/sra-stat.dir/assembly-statistics.c.o" "CMakeFiles/sra-stat.dir/sra.c.o" "CMakeFiles/sra-stat.dir/sra-stat.c.o" -o ../../../bin/sra-stat  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f sra-stat.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv sra-stat sra-stat.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-stat.3.0.9 sra-stat.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-stat.3 sra-stat
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 36%] Linking C executable ../../../bin/samview
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/samview.dir/link.txt --verbose=1
[ 36%] Built target sra-stat
make  -f tools/loaders/sra-sort/CMakeFiles/dump-blob-boundaries.dir/build.make tools/loaders/sra-sort/CMakeFiles/dump-blob-boundaries.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort/CMakeFiles/dump-blob-boundaries.dir/DependInfo.cmake "--color="
[ 36%] Linking C executable ../../../bin/kar+meta
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cmake -E cmake_link_script CMakeFiles/kar+meta.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/sra-sort/CMakeFiles/dump-blob-boundaries.dir/build.make tools/loaders/sra-sort/CMakeFiles/dump-blob-boundaries.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 36%] Building C object tools/loaders/sra-sort/CMakeFiles/dump-blob-boundaries.dir/dump-blob-boundaries.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/dump-blob-boundaries.dir/dump-blob-boundaries.c.o -MF CMakeFiles/dump-blob-boundaries.dir/dump-blob-boundaries.c.o.d -o CMakeFiles/dump-blob-boundaries.dir/dump-blob-boundaries.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/dump-blob-boundaries.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/samview.dir/link.d CMakeFiles/samview.dir/bam.c.o CMakeFiles/samview.dir/sam.c.o CMakeFiles/samview.dir/samview.c.o -o ../../../bin/samview  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lz
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f samview.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv samview samview.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s samview.3.0.9 samview.3
[ 36%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb_info.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb_info.c.o -MF CMakeFiles/vdb-dump.dir/vdb_info.c.o.d -o CMakeFiles/vdb-dump.dir/vdb_info.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump/vdb_info.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s samview.3 samview
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/kar+meta.dir/link.d CMakeFiles/kar+meta.dir/kar+util.c.o CMakeFiles/kar+meta.dir/kar+meta.c.o -o ../../../bin/kar+meta  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f kar+meta.3.0.9
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv kar+meta kar+meta.3.0.9
[ 36%] Building C object tools/loaders/kar/CMakeFiles/kar+.dir/kar+.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/kar\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/kar/CMakeFiles/kar+.dir/kar+.c.o -MF CMakeFiles/kar+.dir/kar+.c.o.d -o CMakeFiles/kar+.dir/kar+.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/kar/kar+.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s kar+meta.3.0.9 kar+meta.3
[ 36%] Built target samview
make  -f tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/build.make tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/depend
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s kar+meta.3 kar+meta
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/build.make tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 37%] Linking C executable ../../../bin/dump-blob-boundaries
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cmake -E cmake_link_script CMakeFiles/dump-blob-boundaries.dir/link.txt --verbose=1
[ 37%] Built target kar+meta
make  -f tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/build.make tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/DependInfo.cmake "--color="
[ 38%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/caps.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/caps.c.o -MF CMakeFiles/sra-sort.dir/caps.c.o.d -o CMakeFiles/sra-sort.dir/caps.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/caps.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/build.make tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 38%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/caps.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/caps.c.o -MF CMakeFiles/sra-sort-cg.dir/caps.c.o.d -o CMakeFiles/sra-sort-cg.dir/caps.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/caps.c
[ 39%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-dump3.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-dump3.c.o -MF CMakeFiles/sam-dump.dir/sam-dump3.c.o.d -o CMakeFiles/sam-dump.dir/sam-dump3.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/sam-dump3.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/dump-blob-boundaries.dir/link.d "CMakeFiles/dump-blob-boundaries.dir/dump-blob-boundaries.c.o" -o ../../../bin/dump-blob-boundaries  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f dump-blob-boundaries.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv dump-blob-boundaries dump-blob-boundaries.3.0.9
[ 39%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/mem.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/mem.c.o -MF CMakeFiles/sra-sort.dir/mem.c.o.d -o CMakeFiles/sra-sort.dir/mem.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/mem.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s dump-blob-boundaries.3.0.9 dump-blob-boundaries.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s dump-blob-boundaries.3 dump-blob-boundaries
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/sam-dump3.c: In function 'KMain':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/sam-dump3.c:557:38: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  557 |                     ReportBuildDate( __DATE__ );
      |                                      ^~~~~~~~
[ 39%] Built target dump-blob-boundaries
make  -f tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/build.make tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/DependInfo.cmake "--color="
[ 39%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/membank.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/membank.c.o -MF CMakeFiles/sra-sort.dir/membank.c.o.d -o CMakeFiles/sra-sort.dir/membank.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/membank.c
[ 39%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/command-line.cpp.o
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/build.make tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/build
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/command-line.cpp.o -MF CMakeFiles/sratools.dir/command-line.cpp.o.d -o CMakeFiles/sratools.dir/command-line.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/command-line.cpp
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 39%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/mem.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/mem.c.o -MF CMakeFiles/sra-sort-cg.dir/mem.c.o.d -o CMakeFiles/sra-sort-cg.dir/mem.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/mem.c
[ 39%] Building C object tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/spot-assembler.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/spot-assembler.c.o -MF CMakeFiles/fastqloader.dir/spot-assembler.c.o.d -o CMakeFiles/fastqloader.dir/spot-assembler.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/fastq-loader/spot-assembler.c
[ 39%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/dyn_string.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/dyn_string.c.o -MF CMakeFiles/sam-dump.dir/dyn_string.c.o.d -o CMakeFiles/sam-dump.dir/dyn_string.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-pileup/dyn_string.c
[ 39%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/membank.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/membank.c.o -MF CMakeFiles/sra-sort-cg.dir/membank.c.o.d -o CMakeFiles/sra-sort-cg.dir/membank.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/membank.c
[ 39%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/paged-membank.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/paged-membank.c.o -MF CMakeFiles/sra-sort.dir/paged-membank.c.o.d -o CMakeFiles/sra-sort.dir/paged-membank.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/paged-membank.c
[ 39%] Linking C executable ../../../bin/sam-dump
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cmake -E cmake_link_script CMakeFiles/sam-dump.dir/link.txt --verbose=1
[ 39%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/tbl_join.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/tbl_join.c.o -MF CMakeFiles/fasterq-dump.dir/tbl_join.c.o.d -o CMakeFiles/fasterq-dump.dir/tbl_join.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/tbl_join.c
[ 39%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/paged-mmapbank.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/paged-mmapbank.c.o -MF CMakeFiles/sra-sort.dir/paged-mmapbank.c.o.d -o CMakeFiles/sra-sort.dir/paged-mmapbank.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/paged-mmapbank.c
[ 39%] Building C object tools/loaders/bam-loader/CMakeFiles/bam-load.dir/alignment-writer.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/bam-load.dir/alignment-writer.c.o -MF CMakeFiles/bam-load.dir/alignment-writer.c.o.d -o CMakeFiles/bam-load.dir/alignment-writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/alignment-writer.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sam-dump.dir/link.d "CMakeFiles/sam-dump.dir/inputfiles.c.o" "CMakeFiles/sam-dump.dir/perf_log.c.o" "CMakeFiles/sam-dump.dir/rna_splice_log.c.o" "CMakeFiles/sam-dump.dir/sam-dump-opts.c.o" "CMakeFiles/sam-dump.dir/out_redir.c.o" "CMakeFiles/sam-dump.dir/sam-hdr.c.o" "CMakeFiles/sam-dump.dir/sam-hdr1.c.o" "CMakeFiles/sam-dump.dir/matecache.c.o" "CMakeFiles/sam-dump.dir/read_fkt.c.o" "CMakeFiles/sam-dump.dir/sam-aligned.c.o" "CMakeFiles/sam-dump.dir/sam-unaligned.c.o" "CMakeFiles/sam-dump.dir/md_flag.c.o" "CMakeFiles/sam-dump.dir/cg_tools.c.o" "CMakeFiles/sam-dump.dir/sam-dump.c.o" "CMakeFiles/sam-dump.dir/sam-dump3.c.o" "CMakeFiles/sam-dump.dir/dyn_string.c.o" -o ../../../bin/sam-dump  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f sam-dump.3.0.9
[ 39%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/paged-membank.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv sam-dump sam-dump.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/paged-membank.c.o -MF CMakeFiles/sra-sort-cg.dir/paged-membank.c.o.d -o CMakeFiles/sra-sort-cg.dir/paged-membank.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/paged-membank.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sam-dump.3.0.9 sam-dump.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sam-dump.3 sam-dump
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sratools.3.0.9 sam-dump-driver
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 39%] Linking C executable ../../../bin/kar+
[ 39%] Building C object tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/common-writer.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cmake -E cmake_link_script CMakeFiles/kar+.dir/link.txt --verbose=1
[ 39%] Built target sam-dump
make  -f tools/loaders/sra-load/CMakeFiles/sff-load.dir/build.make tools/loaders/sra-load/CMakeFiles/sff-load.dir/depend
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/common-writer.c.o -MF CMakeFiles/fastqloader.dir/common-writer.c.o.d -o CMakeFiles/fastqloader.dir/common-writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/fastq-loader/common-writer.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load/CMakeFiles/sff-load.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/sra-load/CMakeFiles/sff-load.dir/build.make tools/loaders/sra-load/CMakeFiles/sff-load.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 40%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/pstring.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/pstring.c.o -MF CMakeFiles/sff-load.dir/pstring.c.o.d -o CMakeFiles/sff-load.dir/pstring.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/pstring.c
[ 40%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/except.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/except.c.o -MF CMakeFiles/sra-sort.dir/except.c.o.d -o CMakeFiles/sra-sort.dir/except.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/except.c
[ 40%] Building C object tools/loaders/bam-loader/CMakeFiles/bam-load.dir/reference-writer.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/bam-load.dir/reference-writer.c.o -MF CMakeFiles/bam-load.dir/reference-writer.c.o.d -o CMakeFiles/bam-load.dir/reference-writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/reference-writer.c
[ 40%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump.c.o -MF CMakeFiles/vdb-dump.dir/vdb-dump.c.o.d -o CMakeFiles/vdb-dump.dir/vdb-dump.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump/vdb-dump.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/kar+.dir/link.d "CMakeFiles/kar+.dir/kar-path.c.o" CMakeFiles/kar+.dir/kar+args.c.o CMakeFiles/kar+.dir/kar+print.c.o CMakeFiles/kar+.dir/kar+util.c.o CMakeFiles/kar+.dir/kar+.c.o -o ../../../bin/kar+  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f kar+.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv kar+ kar+.3.0.9
[ 40%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/paged-mmapbank.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/paged-mmapbank.c.o -MF CMakeFiles/sra-sort-cg.dir/paged-mmapbank.c.o.d -o CMakeFiles/sra-sort-cg.dir/paged-mmapbank.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/paged-mmapbank.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s kar+.3.0.9 kar+.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s kar+.3 kar+
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 40%] Built target kar+
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load/CMakeFiles/fastq-load.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 41%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/pstring.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/pstring.c.o -MF CMakeFiles/fastq-load.dir/pstring.c.o.d -o CMakeFiles/fastq-load.dir/pstring.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/pstring.c
[ 41%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/idx-mapping.c.o
[ 41%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/common-xml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/common-xml.c.o -MF CMakeFiles/fastq-load.dir/common-xml.c.o.d -o CMakeFiles/fastq-load.dir/common-xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/common-xml.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/idx-mapping.c.o -MF CMakeFiles/sra-sort.dir/idx-mapping.c.o.d -o CMakeFiles/sra-sort.dir/idx-mapping.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/idx-mapping.c
[ 41%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/common-xml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/common-xml.c.o -MF CMakeFiles/sff-load.dir/common-xml.c.o.d -o CMakeFiles/sff-load.dir/common-xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/common-xml.c
[ 41%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/except.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/except.c.o -MF CMakeFiles/sra-sort-cg.dir/except.c.o.d -o CMakeFiles/sra-sort-cg.dir/except.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/except.c
[ 41%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/experiment-xml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/experiment-xml.c.o -MF CMakeFiles/fastq-load.dir/experiment-xml.c.o.d -o CMakeFiles/fastq-load.dir/experiment-xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/experiment-xml.c
[ 41%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/idx-mapping.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/idx-mapping.c.o -MF CMakeFiles/sra-sort-cg.dir/idx-mapping.c.o.d -o CMakeFiles/sra-sort-cg.dir/idx-mapping.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/idx-mapping.c
[ 41%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/map-file.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/map-file.c.o -MF CMakeFiles/sra-sort.dir/map-file.c.o.d -o CMakeFiles/sra-sort.dir/map-file.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/map-file.c
[ 41%] Building C object tools/loaders/bam-loader/CMakeFiles/bam-load.dir/sequence-writer.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/bam-load.dir/sequence-writer.c.o -MF CMakeFiles/bam-load.dir/sequence-writer.c.o.d -o CMakeFiles/bam-load.dir/sequence-writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/sequence-writer.c
[ 41%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/temp_registry.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/temp_registry.c.o -MF CMakeFiles/fasterq-dump.dir/temp_registry.c.o.d -o CMakeFiles/fasterq-dump.dir/temp_registry.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/temp_registry.c
[ 41%] Building C object tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/sequence-writer.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/sequence-writer.c.o -MF CMakeFiles/fastqloader.dir/sequence-writer.c.o.d -o CMakeFiles/fastqloader.dir/sequence-writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/fastq-loader/sequence-writer.c
[ 42%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/map-file.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/map-file.c.o -MF CMakeFiles/sra-sort-cg.dir/map-file.c.o.d -o CMakeFiles/sra-sort-cg.dir/map-file.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/map-file.c
[ 42%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/run-xml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/run-xml.c.o -MF CMakeFiles/fastq-load.dir/run-xml.c.o.d -o CMakeFiles/fastq-load.dir/run-xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/run-xml.c
[ 42%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/copy_machine.c.o
[ 42%] Building CXX object tools/loaders/bam-loader/CMakeFiles/bam-load.dir/loader-imp.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/copy_machine.c.o -MF CMakeFiles/fasterq-dump.dir/copy_machine.c.o.d -o CMakeFiles/fasterq-dump.dir/copy_machine.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/copy_machine.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/bam-load.dir/loader-imp.c.o -MF CMakeFiles/bam-load.dir/loader-imp.c.o.d -o CMakeFiles/bam-load.dir/loader-imp.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/loader-imp.c
[ 43%] Building C object tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/common-reader.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/common-reader.c.o -MF CMakeFiles/fastqloader.dir/common-reader.c.o.d -o CMakeFiles/fastqloader.dir/common-reader.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/fastq-loader/common-reader.c
[ 44%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/run-source.cpp.o
[ 44%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/loader-file.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/run-source.cpp.o -MF CMakeFiles/sratools.dir/run-source.cpp.o.d -o CMakeFiles/sratools.dir/run-source.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/run-source.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/loader-file.c.o -MF CMakeFiles/fastq-load.dir/loader-file.c.o.d -o CMakeFiles/fastq-load.dir/loader-file.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader-file.c
[ 44%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/multi_writer.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/multi_writer.c.o -MF CMakeFiles/fasterq-dump.dir/multi_writer.c.o.d -o CMakeFiles/fasterq-dump.dir/multi_writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/multi_writer.c
[ 44%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/experiment-xml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/experiment-xml.c.o -MF CMakeFiles/sff-load.dir/experiment-xml.c.o.d -o CMakeFiles/sff-load.dir/experiment-xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/experiment-xml.c
[ 44%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/col-pair.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/col-pair.c.o -MF CMakeFiles/sra-sort.dir/col-pair.c.o.d -o CMakeFiles/sra-sort.dir/col-pair.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/col-pair.c
[ 45%] Linking C executable ../../../bin/vdb-dump
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-dump.dir/link.txt --verbose=1
[ 45%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/loader-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/loader-fmt.c.o -MF CMakeFiles/fastq-load.dir/loader-fmt.c.o.d -o CMakeFiles/fastq-load.dir/loader-fmt.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader-fmt.c
[ 46%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/concatenator.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/concatenator.c.o -MF CMakeFiles/fasterq-dump.dir/concatenator.c.o.d -o CMakeFiles/fasterq-dump.dir/concatenator.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/concatenator.c
[ 46%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/col-pair.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/col-pair.c.o -MF CMakeFiles/sra-sort-cg.dir/col-pair.c.o.d -o CMakeFiles/sra-sort-cg.dir/col-pair.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/col-pair.c
[ 46%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/sra-writer.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -Wno-stringop-truncation -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/sra-writer.c.o -MF CMakeFiles/fastq-load.dir/sra-writer.c.o.d -o CMakeFiles/fastq-load.dir/sra-writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/sra-writer.c
[ 46%] Building C object tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/fastq-reader.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/fastq-reader.c.o -MF CMakeFiles/fastqloader.dir/fastq-reader.c.o.d -o CMakeFiles/fastqloader.dir/fastq-reader.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/fastq-loader/fastq-reader.c
[ 46%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/ref_inventory.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/ref_inventory.c.o -MF CMakeFiles/fasterq-dump.dir/ref_inventory.c.o.d -o CMakeFiles/fasterq-dump.dir/ref_inventory.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/ref_inventory.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-dump.dir/link.d "CMakeFiles/vdb-dump.dir/vdb-dump-context.c.o" "CMakeFiles/vdb-dump.dir/vdb-dump-coldefs.c.o" "CMakeFiles/vdb-dump.dir/vdb-dump-tools.c.o" "CMakeFiles/vdb-dump.dir/vdb-dump-str.c.o" "CMakeFiles/vdb-dump.dir/vdb-dump-helper.c.o" "CMakeFiles/vdb-dump.dir/vdb-dump-formats.c.o" "CMakeFiles/vdb-dump.dir/vdb-dump-redir.c.o" "CMakeFiles/vdb-dump.dir/vdb-dump-fastq.c.o" "CMakeFiles/vdb-dump.dir/vdb-dump-view-spec.c.o" "CMakeFiles/vdb-dump.dir/vdb-dump-inspect.c.o" "CMakeFiles/vdb-dump.dir/vdb_info.c.o" "CMakeFiles/vdb-dump.dir/vdb-dump.c.o" -o ../../../bin/vdb-dump  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f vdb-dump.3.0.9
[ 46%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/loader.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/loader.c.o -MF CMakeFiles/fastq-load.dir/loader.c.o.d -o CMakeFiles/fastq-load.dir/loader.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv vdb-dump vdb-dump.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-dump.3.0.9 vdb-dump.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-dump.3 vdb-dump
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sratools.3.0.9 vdb-dump-driver
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader.c: In function 'WriteSoftwareVersionsMeta':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader.c:889:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  889 |         rc = KLoaderMeta_Write(node, argv0, __DATE__, fe_name, fe_version);
      |                                             ^~~~~~~~
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 46%] Built target vdb-dump
make  -f tools/loaders/sra-load/CMakeFiles/srf-load.dir/build.make tools/loaders/sra-load/CMakeFiles/srf-load.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load/CMakeFiles/srf-load.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/sra-load/CMakeFiles/srf-load.dir/build.make tools/loaders/sra-load/CMakeFiles/srf-load.dir/build
[ 47%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/row-set.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/row-set.c.o -MF CMakeFiles/sra-sort.dir/row-set.c.o.d -o CMakeFiles/sra-sort.dir/row-set.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/row-set.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 47%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/pstring.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/pstring.c.o -MF CMakeFiles/srf-load.dir/pstring.c.o.d -o CMakeFiles/srf-load.dir/pstring.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/pstring.c
[ 47%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/fasterq-dump.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/fasterq-dump.c.o -MF CMakeFiles/fasterq-dump.dir/fasterq-dump.c.o.d -o CMakeFiles/fasterq-dump.dir/fasterq-dump.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/fasterq-dump/fasterq-dump.c
[ 47%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/row-set.c.o
[ 47%] Building C object tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/zz_fastq-grammar.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/row-set.c.o -MF CMakeFiles/sra-sort-cg.dir/row-set.c.o.d -o CMakeFiles/sra-sort-cg.dir/row-set.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/row-set.c
[ 47%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/simple-row-set.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/zz_fastq-grammar.c.o -MF CMakeFiles/fastqloader.dir/zz_fastq-grammar.c.o.d -o CMakeFiles/fastqloader.dir/zz_fastq-grammar.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/fastq-loader/zz_fastq-grammar.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/simple-row-set.c.o -MF CMakeFiles/sra-sort.dir/simple-row-set.c.o.d -o CMakeFiles/sra-sort.dir/simple-row-set.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/simple-row-set.c
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/loader-imp.c:3453:44: warning: "/*" within comment [-Wcomment]
 3453 |             int const logLevel = klogWarn; /*G.assembleWithSecondary ? klogWarn : klogErr;
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/loader-imp.c:4163:48: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
 4163 |         rc = KLoaderMeta_Write(node, progName, __DATE__, "BAM", KAppVersion());
      |                                                ^~~~~~~~
[ 47%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/mapping-row-set.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/mapping-row-set.c.o -MF CMakeFiles/sra-sort.dir/mapping-row-set.c.o.d -o CMakeFiles/sra-sort.dir/mapping-row-set.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/mapping-row-set.c
[ 47%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/common-xml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/common-xml.c.o -MF CMakeFiles/srf-load.dir/common-xml.c.o.d -o CMakeFiles/srf-load.dir/common-xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/common-xml.c
[ 47%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/simple-row-set.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/simple-row-set.c.o -MF CMakeFiles/sra-sort-cg.dir/simple-row-set.c.o.d -o CMakeFiles/sra-sort-cg.dir/simple-row-set.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/simple-row-set.c
[ 47%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/run-xml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/run-xml.c.o -MF CMakeFiles/sff-load.dir/run-xml.c.o.d -o CMakeFiles/sff-load.dir/run-xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/run-xml.c
[ 47%] Building C object tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/zz_fastq-lex.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -Wno-misleading-indentation -MD -MT tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/zz_fastq-lex.c.o -MF CMakeFiles/fastqloader.dir/zz_fastq-lex.c.o.d -o CMakeFiles/fastqloader.dir/zz_fastq-lex.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/fastq-loader/zz_fastq-lex.c
In file included from /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/sratools.hpp:31,
                 from /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/run-source.hpp:39,
                 from /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/run-source.cpp:51:
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/accession.hpp: In static member function 'static const char* sratools::Accession::qualityTypeFor(const char*)':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/accession.hpp:82:56: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                                                        ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/accession.hpp:82:38: note: the temporary was destroyed at the end of the full expression 'make_sequence<const char**>((& sratools::Accession::extensions[1]), 3)'
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                         ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 47%] Linking C executable ../../../bin/fasterq-dump
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cmake -E cmake_link_script CMakeFiles/fasterq-dump.dir/link.txt --verbose=1
[ 47%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/mapping-row-set.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/mapping-row-set.c.o -MF CMakeFiles/sra-sort-cg.dir/mapping-row-set.c.o.d -o CMakeFiles/sra-sort-cg.dir/mapping-row-set.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/mapping-row-set.c
[ 47%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/sorting-row-set.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/sorting-row-set.c.o -MF CMakeFiles/sra-sort.dir/sorting-row-set.c.o.d -o CMakeFiles/sra-sort.dir/sorting-row-set.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/sorting-row-set.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/fasterq-dump.dir/link.d "CMakeFiles/fasterq-dump.dir/helper.c.o" "CMakeFiles/fasterq-dump.dir/arg_helper.c.o" "CMakeFiles/fasterq-dump.dir/dflt_defline.c.o" "CMakeFiles/fasterq-dump.dir/tool_ctx.c.o" "CMakeFiles/fasterq-dump.dir/inspector.c.o" "CMakeFiles/fasterq-dump.dir/sbuffer.c.o" "CMakeFiles/fasterq-dump.dir/err_msg.c.o" "CMakeFiles/fasterq-dump.dir/file_tools.c.o" "CMakeFiles/fasterq-dump.dir/var_fmt.c.o" "CMakeFiles/fasterq-dump.dir/flex_printer.c.o" "CMakeFiles/fasterq-dump.dir/temp_dir.c.o" "CMakeFiles/fasterq-dump.dir/progress_thread.c.o" "CMakeFiles/fasterq-dump.dir/cleanup_task.c.o" "CMakeFiles/fasterq-dump.dir/index.c.o" "CMakeFiles/fasterq-dump.dir/lookup_writer.c.o" "CMakeFiles/fasterq-dump.dir/lookup_reader.c.o" "CMakeFiles/fasterq-dump.dir/locked_file_list.c.o" "CMakeFiles/fasterq-dump.dir/locked_value.c.o" "CMakeFiles/fasterq-dump.dir/file_printer.c.o" "CMakeFiles/fasterq-dump.dir/merge_sorter.c.o" "CMakeFiles/fasterq-dump.dir/sorter.c.o" "CMakeFiles/fasterq-dump.dir/cmn_iter.c.o" "CMakeFiles/fasterq-dump.dir/raw_read_iter.c.o" "CMakeFiles/fasterq-dump.dir/special_iter.c.o" "CMakeFiles/fasterq-dump.dir/fq_seq_ua_iter.c.o" "CMakeFiles/fasterq-dump.dir/fq_seq_csra_iter.c.o" "CMakeFiles/fasterq-dump.dir/align_iter.c.o" "CMakeFiles/fasterq-dump.dir/simple_fasta_iter.c.o" "CMakeFiles/fasterq-dump.dir/db_join.c.o" "CMakeFiles/fasterq-dump.dir/tbl_join.c.o" "CMakeFiles/fasterq-dump.dir/temp_registry.c.o" "CMakeFiles/fasterq-dump.dir/copy_machine.c.o" "CMakeFiles/fasterq-dump.dir/multi_writer.c.o" "CMakeFiles/fasterq-dump.dir/concatenator.c.o" "CMakeFiles/fasterq-dump.dir/ref_inventory.c.o" "CMakeFiles/fasterq-dump.dir/fasterq-dump.c.o" -o ../../../bin/fasterq-dump  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f fasterq-dump.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv fasterq-dump fasterq-dump.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s fasterq-dump.3.0.9 fasterq-dump.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s fasterq-dump.3 fasterq-dump
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sratools.3.0.9 fasterq-dump-driver
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 47%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/meta-pair.c.o
[ 47%] Built target fasterq-dump
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/meta-pair.c.o -MF CMakeFiles/sra-sort.dir/meta-pair.c.o.d -o CMakeFiles/sra-sort.dir/meta-pair.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/meta-pair.c
make  -f tools/loaders/sra-load/CMakeFiles/abi-load.dir/build.make tools/loaders/sra-load/CMakeFiles/abi-load.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load/CMakeFiles/abi-load.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 48%] Building C object tools/loaders/sra-load/CMakeFiles/abi-load.dir/pstring.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/abi-load.dir/pstring.c.o -MF CMakeFiles/abi-load.dir/pstring.c.o.d -o CMakeFiles/abi-load.dir/pstring.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/pstring.c
[ 48%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/sorting-row-set.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/sorting-row-set.c.o -MF CMakeFiles/sra-sort-cg.dir/sorting-row-set.c.o.d -o CMakeFiles/sra-sort-cg.dir/sorting-row-set.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/sorting-row-set.c
[ 48%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/writer-illumina.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/writer-illumina.c.o -MF CMakeFiles/fastq-load.dir/writer-illumina.c.o.d -o CMakeFiles/fastq-load.dir/writer-illumina.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/writer-illumina.c
[ 48%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/loader-file.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/loader-file.c.o -MF CMakeFiles/sff-load.dir/loader-file.c.o.d -o CMakeFiles/sff-load.dir/loader-file.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader-file.c
[ 48%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/meta-pair.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/meta-pair.c.o -MF CMakeFiles/sra-sort-cg.dir/meta-pair.c.o.d -o CMakeFiles/sra-sort-cg.dir/meta-pair.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/meta-pair.c
[ 48%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/dir-pair.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/dir-pair.c.o -MF CMakeFiles/sra-sort.dir/dir-pair.c.o.d -o CMakeFiles/sra-sort.dir/dir-pair.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/dir-pair.c
[ 48%] Building C object tools/loaders/sra-load/CMakeFiles/abi-load.dir/common-xml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/abi-load.dir/common-xml.c.o -MF CMakeFiles/abi-load.dir/common-xml.c.o.d -o CMakeFiles/abi-load.dir/common-xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/common-xml.c
[ 48%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/loader-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/loader-fmt.c.o -MF CMakeFiles/sff-load.dir/loader-fmt.c.o.d -o CMakeFiles/sff-load.dir/loader-fmt.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader-fmt.c
[ 48%] Building C object tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/id2name.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/id2name.c.o -MF CMakeFiles/fastqloader.dir/id2name.c.o.d -o CMakeFiles/fastqloader.dir/id2name.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/fastq-loader/id2name.c
[ 48%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/sra-writer.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -Wno-stringop-truncation -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/sra-writer.c.o -MF CMakeFiles/sff-load.dir/sra-writer.c.o.d -o CMakeFiles/sff-load.dir/sra-writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/sra-writer.c
[ 48%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/experiment-xml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/experiment-xml.c.o -MF CMakeFiles/srf-load.dir/experiment-xml.c.o.d -o CMakeFiles/srf-load.dir/experiment-xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/experiment-xml.c
[ 48%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/run-xml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/run-xml.c.o -MF CMakeFiles/srf-load.dir/run-xml.c.o.d -o CMakeFiles/srf-load.dir/run-xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/run-xml.c
[ 49%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/writer-454.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/writer-454.c.o -MF CMakeFiles/fastq-load.dir/writer-454.c.o.d -o CMakeFiles/fastq-load.dir/writer-454.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/writer-454.c
[ 49%] Linking C static library ../../../ilib/libfastqloader.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cmake -P CMakeFiles/fastqloader.dir/cmake_clean_target.cmake
[ 49%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/dir-pair.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/dir-pair.c.o -MF CMakeFiles/sra-sort-cg.dir/dir-pair.c.o.d -o CMakeFiles/sra-sort-cg.dir/dir-pair.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/dir-pair.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastqloader.dir/link.txt --verbose=1
[ 49%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/tbl-pair.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/tbl-pair.c.o -MF CMakeFiles/sra-sort.dir/tbl-pair.c.o.d -o CMakeFiles/sra-sort.dir/tbl-pair.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/tbl-pair.c
[ 49%] Linking CXX executable ../../../bin/sra-info
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-info && /usr/bin/cmake -E cmake_link_script CMakeFiles/sra-info.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../ilib/libfastqloader.a "CMakeFiles/fastqloader.dir/spot-assembler.c.o" "CMakeFiles/fastqloader.dir/common-writer.c.o" "CMakeFiles/fastqloader.dir/sequence-writer.c.o" "CMakeFiles/fastqloader.dir/common-reader.c.o" "CMakeFiles/fastqloader.dir/fastq-reader.c.o" "CMakeFiles/fastqloader.dir/zz_fastq-grammar.c.o" "CMakeFiles/fastqloader.dir/zz_fastq-lex.c.o" CMakeFiles/fastqloader.dir/id2name.c.o
/usr/bin/ranlib ../../../ilib/libfastqloader.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 49%] Built target fastqloader
[ 49%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/writer-ion-torrent.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/writer-ion-torrent.c.o -MF CMakeFiles/fastq-load.dir/writer-ion-torrent.c.o.d -o CMakeFiles/fastq-load.dir/writer-ion-torrent.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/writer-ion-torrent.c
[ 49%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/loader.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/loader.c.o -MF CMakeFiles/sff-load.dir/loader.c.o.d -o CMakeFiles/sff-load.dir/loader.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader.c
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader.c: In function 'WriteSoftwareVersionsMeta':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader.c:889:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  889 |         rc = KLoaderMeta_Write(node, argv0, __DATE__, fe_name, fe_version);
      |                                             ^~~~~~~~
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sra-info.dir/link.d "CMakeFiles/sra-info.dir/main.cpp.o" "CMakeFiles/sra-info.dir/sra-info.cpp.o" "CMakeFiles/sra-info.dir/formatter.cpp.o" -o ../../../bin/sra-info  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f sra-info.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv sra-info sra-info.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-info.3.0.9 sra-info.3
[ 49%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/fastq-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-info.3 sra-info
[ 49%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/tbl-pair.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/tbl-pair.c.o -MF CMakeFiles/sra-sort-cg.dir/tbl-pair.c.o.d -o CMakeFiles/sra-sort-cg.dir/tbl-pair.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/tbl-pair.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/fastq-fmt.c.o -MF CMakeFiles/fastq-load.dir/fastq-fmt.c.o.d -o CMakeFiles/fastq-load.dir/fastq-fmt.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/fastq-fmt.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 49%] Building C object tools/loaders/sra-load/CMakeFiles/abi-load.dir/experiment-xml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/abi-load.dir/experiment-xml.c.o -MF CMakeFiles/abi-load.dir/experiment-xml.c.o.d -o CMakeFiles/abi-load.dir/experiment-xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/experiment-xml.c
[ 49%] Built target sra-info
[ 50%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/db-pair.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/db-pair.c.o -MF CMakeFiles/sra-sort-cg.dir/db-pair.c.o.d -o CMakeFiles/sra-sort-cg.dir/db-pair.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/db-pair.c
[ 50%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/loader-file.c.o
[ 50%] Building C object tools/loaders/sra-load/CMakeFiles/abi-load.dir/run-xml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/loader-file.c.o -MF CMakeFiles/srf-load.dir/loader-file.c.o.d -o CMakeFiles/srf-load.dir/loader-file.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader-file.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/abi-load.dir/run-xml.c.o -MF CMakeFiles/abi-load.dir/run-xml.c.o.d -o CMakeFiles/abi-load.dir/run-xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/run-xml.c
[ 50%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/loader-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/loader-fmt.c.o -MF CMakeFiles/srf-load.dir/loader-fmt.c.o.d -o CMakeFiles/srf-load.dir/loader-fmt.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader-fmt.c
[ 51%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/sra-writer.c.o
[ 51%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/db-pair.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -Wno-stringop-truncation -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/sra-writer.c.o -MF CMakeFiles/srf-load.dir/sra-writer.c.o.d -o CMakeFiles/srf-load.dir/sra-writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/sra-writer.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/db-pair.c.o -MF CMakeFiles/sra-sort.dir/db-pair.c.o.d -o CMakeFiles/sra-sort.dir/db-pair.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/db-pair.c
[ 51%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/glob-poslen.c.o
[ 51%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/loader.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/glob-poslen.c.o -MF CMakeFiles/sra-sort-cg.dir/glob-poslen.c.o.d -o CMakeFiles/sra-sort-cg.dir/glob-poslen.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/glob-poslen.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/loader.c.o -MF CMakeFiles/srf-load.dir/loader.c.o.d -o CMakeFiles/srf-load.dir/loader.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader.c
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader.c: In function 'WriteSoftwareVersionsMeta':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader.c:889:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  889 |         rc = KLoaderMeta_Write(node, argv0, __DATE__, fe_name, fe_version);
      |                                             ^~~~~~~~
[ 51%] Linking C executable ../../../bin/fastq-load
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastq-load.dir/link.txt --verbose=1
[ 51%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/poslen-col-pair.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/poslen-col-pair.c.o -MF CMakeFiles/sra-sort-cg.dir/poslen-col-pair.c.o.d -o CMakeFiles/sra-sort-cg.dir/poslen-col-pair.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/poslen-col-pair.c
[ 51%] Building C object tools/loaders/sra-load/CMakeFiles/abi-load.dir/loader-file.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/abi-load.dir/loader-file.c.o -MF CMakeFiles/abi-load.dir/loader-file.c.o.d -o CMakeFiles/abi-load.dir/loader-file.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader-file.c
[ 51%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/srf.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/srf.c.o -MF CMakeFiles/srf-load.dir/srf.c.o.d -o CMakeFiles/srf-load.dir/srf.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/srf.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/fastq-load.dir/link.d "CMakeFiles/fastq-load.dir/pstring.c.o" "CMakeFiles/fastq-load.dir/common-xml.c.o" "CMakeFiles/fastq-load.dir/experiment-xml.c.o" "CMakeFiles/fastq-load.dir/run-xml.c.o" "CMakeFiles/fastq-load.dir/loader-file.c.o" "CMakeFiles/fastq-load.dir/loader-fmt.c.o" "CMakeFiles/fastq-load.dir/sra-writer.c.o" "CMakeFiles/fastq-load.dir/loader.c.o" "CMakeFiles/fastq-load.dir/writer-illumina.c.o" "CMakeFiles/fastq-load.dir/writer-454.c.o" "CMakeFiles/fastq-load.dir/writer-ion-torrent.c.o" "CMakeFiles/fastq-load.dir/fastq-fmt.c.o" -o ../../../bin/fastq-load  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm ../../../ilib/libkxml.a /usr/lib/aarch64-linux-gnu/libxml2.so
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f fastq-load.3.0.9
[ 51%] Building C object tools/loaders/sra-load/CMakeFiles/abi-load.dir/loader-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/abi-load.dir/loader-fmt.c.o -MF CMakeFiles/abi-load.dir/loader-fmt.c.o.d -o CMakeFiles/abi-load.dir/loader-fmt.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader-fmt.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv fastq-load fastq-load.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s fastq-load.3.0.9 fastq-load.3
[ 51%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/writer-454.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/writer-454.c.o -MF CMakeFiles/sff-load.dir/writer-454.c.o.d -o CMakeFiles/sff-load.dir/writer-454.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/writer-454.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s fastq-load.3 fastq-load
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 51%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/ref-alignid-col.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/ref-alignid-col.c.o -MF CMakeFiles/sra-sort-cg.dir/ref-alignid-col.c.o.d -o CMakeFiles/sra-sort-cg.dir/ref-alignid-col.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/ref-alignid-col.c
[ 51%] Building C object tools/loaders/sra-load/CMakeFiles/abi-load.dir/sra-writer.c.o
[ 51%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/glob-poslen.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -Wno-stringop-truncation -MD -MT tools/loaders/sra-load/CMakeFiles/abi-load.dir/sra-writer.c.o -MF CMakeFiles/abi-load.dir/sra-writer.c.o.d -o CMakeFiles/abi-load.dir/sra-writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/sra-writer.c
[ 51%] Built target fastq-load
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/glob-poslen.c.o -MF CMakeFiles/sra-sort.dir/glob-poslen.c.o.d -o CMakeFiles/sra-sort.dir/glob-poslen.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/glob-poslen.c
make  -f tools/loaders/sra-load/CMakeFiles/illumina-load.dir/build.make tools/loaders/sra-load/CMakeFiles/illumina-load.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load/CMakeFiles/illumina-load.dir/DependInfo.cmake "--color="
[ 52%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/writer-ion-torrent.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/writer-ion-torrent.c.o -MF CMakeFiles/sff-load.dir/writer-ion-torrent.c.o.d -o CMakeFiles/sff-load.dir/writer-ion-torrent.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/writer-ion-torrent.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/sra-load/CMakeFiles/illumina-load.dir/build.make tools/loaders/sra-load/CMakeFiles/illumina-load.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 53%] Building C object tools/loaders/sra-load/CMakeFiles/illumina-load.dir/pstring.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/illumina-load.dir/pstring.c.o -MF CMakeFiles/illumina-load.dir/pstring.c.o.d -o CMakeFiles/illumina-load.dir/pstring.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/pstring.c
[ 53%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/buff-writer.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/buff-writer.c.o -MF CMakeFiles/sra-sort-cg.dir/buff-writer.c.o.d -o CMakeFiles/sra-sort-cg.dir/buff-writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/buff-writer.c
[ 53%] Building C object tools/loaders/sra-load/CMakeFiles/abi-load.dir/loader.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/abi-load.dir/loader.c.o -MF CMakeFiles/abi-load.dir/loader.c.o.d -o CMakeFiles/abi-load.dir/loader.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader.c
[ 54%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/poslen-col-pair.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/poslen-col-pair.c.o -MF CMakeFiles/sra-sort.dir/poslen-col-pair.c.o.d -o CMakeFiles/sra-sort.dir/poslen-col-pair.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/poslen-col-pair.c
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader.c: In function 'WriteSoftwareVersionsMeta':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader.c:889:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  889 |         rc = KLoaderMeta_Write(node, argv0, __DATE__, fe_name, fe_version);
      |                                             ^~~~~~~~
[ 54%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/sff-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/sff-fmt.c.o -MF CMakeFiles/sff-load.dir/sff-fmt.c.o.d -o CMakeFiles/sff-load.dir/sff-fmt.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/sff-fmt.c
[ 54%] Building C object tools/loaders/sra-load/CMakeFiles/abi-load.dir/writer-absolid.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/abi-load.dir/writer-absolid.c.o -MF CMakeFiles/abi-load.dir/writer-absolid.c.o.d -o CMakeFiles/abi-load.dir/writer-absolid.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/writer-absolid.c
[ 54%] Building C object tools/loaders/sra-load/CMakeFiles/illumina-load.dir/common-xml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/illumina-load.dir/common-xml.c.o -MF CMakeFiles/illumina-load.dir/common-xml.c.o.d -o CMakeFiles/illumina-load.dir/common-xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/common-xml.c
[ 55%] Building C object tools/loaders/sra-load/CMakeFiles/abi-load.dir/absolid-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/abi-load.dir/absolid-fmt.c.o -MF CMakeFiles/abi-load.dir/absolid-fmt.c.o.d -o CMakeFiles/abi-load.dir/absolid-fmt.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/absolid-fmt.c
[ 55%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/id-mapper-col.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/id-mapper-col.c.o -MF CMakeFiles/sra-sort-cg.dir/id-mapper-col.c.o.d -o CMakeFiles/sra-sort-cg.dir/id-mapper-col.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/id-mapper-col.c
[ 55%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/ref-alignid-col.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/ref-alignid-col.c.o -MF CMakeFiles/sra-sort.dir/ref-alignid-col.c.o.d -o CMakeFiles/sra-sort.dir/ref-alignid-col.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/ref-alignid-col.c
[ 55%] Linking C executable ../../../bin/sff-load
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cmake -E cmake_link_script CMakeFiles/sff-load.dir/link.txt --verbose=1
[ 55%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/capture-first-half-aligned.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/capture-first-half-aligned.c.o -MF CMakeFiles/sra-sort-cg.dir/capture-first-half-aligned.c.o.d -o CMakeFiles/sra-sort-cg.dir/capture-first-half-aligned.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/capture-first-half-aligned.c
[ 55%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/srf-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/srf-fmt.c.o -MF CMakeFiles/srf-load.dir/srf-fmt.c.o.d -o CMakeFiles/srf-load.dir/srf-fmt.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/srf-fmt.c
[ 55%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/run.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/run.c.o -MF CMakeFiles/sra-sort-cg.dir/run.c.o.d -o CMakeFiles/sra-sort-cg.dir/run.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/run.c
[ 55%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/sra-sort.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/sra-sort.c.o -MF CMakeFiles/sra-sort-cg.dir/sra-sort.c.o.d -o CMakeFiles/sra-sort-cg.dir/sra-sort.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/sra-sort.c
[ 56%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/xcheck-ref-align.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/xcheck-ref-align.c.o -MF CMakeFiles/sra-sort-cg.dir/xcheck-ref-align.c.o.d -o CMakeFiles/sra-sort-cg.dir/xcheck-ref-align.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/xcheck-ref-align.c
[ 56%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/buff-writer.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/buff-writer.c.o -MF CMakeFiles/sra-sort.dir/buff-writer.c.o.d -o CMakeFiles/sra-sort.dir/buff-writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/buff-writer.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sff-load.dir/link.d "CMakeFiles/sff-load.dir/pstring.c.o" "CMakeFiles/sff-load.dir/common-xml.c.o" "CMakeFiles/sff-load.dir/experiment-xml.c.o" "CMakeFiles/sff-load.dir/run-xml.c.o" "CMakeFiles/sff-load.dir/loader-file.c.o" "CMakeFiles/sff-load.dir/loader-fmt.c.o" "CMakeFiles/sff-load.dir/sra-writer.c.o" "CMakeFiles/sff-load.dir/loader.c.o" "CMakeFiles/sff-load.dir/writer-454.c.o" "CMakeFiles/sff-load.dir/writer-ion-torrent.c.o" "CMakeFiles/sff-load.dir/sff-fmt.c.o" -o ../../../bin/sff-load  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm ../../../ilib/libkxml.a /usr/lib/aarch64-linux-gnu/libxml2.so
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f sff-load.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv sff-load sff-load.3.0.9
[ 56%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/id-mapper-col.c.o
[ 56%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/csra-tbl.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/csra-tbl.c.o -MF CMakeFiles/sra-sort-cg.dir/csra-tbl.c.o.d -o CMakeFiles/sra-sort-cg.dir/csra-tbl.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/csra-tbl.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/id-mapper-col.c.o -MF CMakeFiles/sra-sort.dir/id-mapper-col.c.o.d -o CMakeFiles/sra-sort.dir/id-mapper-col.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/id-mapper-col.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sff-load.3.0.9 sff-load.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sff-load.3 sff-load
[ 56%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/writer-illumina.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/writer-illumina.c.o -MF CMakeFiles/srf-load.dir/writer-illumina.c.o.d -o CMakeFiles/srf-load.dir/writer-illumina.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/writer-illumina.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 56%] Built target sff-load
make  -f tools/loaders/sra-load/CMakeFiles/helicos-load.dir/build.make tools/loaders/sra-load/CMakeFiles/helicos-load.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load/CMakeFiles/helicos-load.dir/DependInfo.cmake "--color="
[ 56%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/csra-pair.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/csra-pair.c.o -MF CMakeFiles/sra-sort-cg.dir/csra-pair.c.o.d -o CMakeFiles/sra-sort-cg.dir/csra-pair.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/csra-pair.c
In file included from /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/loader-imp.c:113:
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/hashing.hpp:214:7: warning: 'sha1_filter' has a base 'sha_filter<hashing::SHA1, 5>' which has internal linkage [-Wsubobject-linkage]
  214 | class sha1_filter : public sha_filter<hashing::SHA1, 5>
      |       ^~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/hashing.hpp:218:7: warning: 'sha224_filter' has a base 'sha_filter<hashing::SHA224, 7>' which has internal linkage [-Wsubobject-linkage]
  218 | class sha224_filter : public sha_filter<hashing::SHA224, 7>
      |       ^~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/hashing.hpp:222:7: warning: 'sha256_filter' has a base 'sha_filter<hashing::SHA256, 8>' which has internal linkage [-Wsubobject-linkage]
  222 | class sha256_filter : public sha_filter<hashing::SHA256, 8>
      |       ^~~~~~~~~~~~~
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/sra-load/CMakeFiles/helicos-load.dir/build.make tools/loaders/sra-load/CMakeFiles/helicos-load.dir/build
[ 56%] Building C object tools/loaders/sra-load/CMakeFiles/illumina-load.dir/experiment-xml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/illumina-load.dir/experiment-xml.c.o -MF CMakeFiles/illumina-load.dir/experiment-xml.c.o.d -o CMakeFiles/illumina-load.dir/experiment-xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/experiment-xml.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 56%] Linking C executable ../../../bin/abi-load
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cmake -E cmake_link_script CMakeFiles/abi-load.dir/link.txt --verbose=1
[ 56%] Building C object tools/loaders/sra-load/CMakeFiles/helicos-load.dir/pstring.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/helicos-load.dir/pstring.c.o -MF CMakeFiles/helicos-load.dir/pstring.c.o.d -o CMakeFiles/helicos-load.dir/pstring.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/pstring.c
[ 56%] Building C object tools/loaders/sra-load/CMakeFiles/helicos-load.dir/common-xml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/helicos-load.dir/common-xml.c.o -MF CMakeFiles/helicos-load.dir/common-xml.c.o.d -o CMakeFiles/helicos-load.dir/common-xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/common-xml.c
[ 56%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/capture-first-half-aligned.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/capture-first-half-aligned.c.o -MF CMakeFiles/sra-sort.dir/capture-first-half-aligned.c.o.d -o CMakeFiles/sra-sort.dir/capture-first-half-aligned.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/capture-first-half-aligned.c
[ 57%] Building C object tools/loaders/sra-load/CMakeFiles/helicos-load.dir/experiment-xml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/helicos-load.dir/experiment-xml.c.o -MF CMakeFiles/helicos-load.dir/experiment-xml.c.o.d -o CMakeFiles/helicos-load.dir/experiment-xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/experiment-xml.c
[ 57%] Building C object tools/loaders/sra-load/CMakeFiles/helicos-load.dir/run-xml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/helicos-load.dir/run-xml.c.o -MF CMakeFiles/helicos-load.dir/run-xml.c.o.d -o CMakeFiles/helicos-load.dir/run-xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/run-xml.c
[ 57%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/run.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/run.c.o -MF CMakeFiles/sra-sort.dir/run.c.o.d -o CMakeFiles/sra-sort.dir/run.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/run.c
[ 57%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/sra-sort.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/sra-sort.c.o -MF CMakeFiles/sra-sort.dir/sra-sort.c.o.d -o CMakeFiles/sra-sort.dir/sra-sort.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/sra-sort.c
[ 57%] Linking C executable ../../../bin/sra-sort-cg
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cmake -E cmake_link_script CMakeFiles/sra-sort-cg.dir/link.txt --verbose=1
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/abi-load.dir/link.d "CMakeFiles/abi-load.dir/pstring.c.o" "CMakeFiles/abi-load.dir/common-xml.c.o" "CMakeFiles/abi-load.dir/experiment-xml.c.o" "CMakeFiles/abi-load.dir/run-xml.c.o" "CMakeFiles/abi-load.dir/loader-file.c.o" "CMakeFiles/abi-load.dir/loader-fmt.c.o" "CMakeFiles/abi-load.dir/sra-writer.c.o" "CMakeFiles/abi-load.dir/loader.c.o" "CMakeFiles/abi-load.dir/writer-absolid.c.o" "CMakeFiles/abi-load.dir/absolid-fmt.c.o" -o ../../../bin/abi-load  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm ../../../ilib/libkxml.a /usr/lib/aarch64-linux-gnu/libxml2.so
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f abi-load.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv abi-load abi-load.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s abi-load.3.0.9 abi-load.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s abi-load.3 abi-load
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 57%] Built target abi-load
make  -f tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/build.make tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/DependInfo.cmake "--color="
[ 57%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/xcheck-ref-align.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/xcheck-ref-align.c.o -MF CMakeFiles/sra-sort.dir/xcheck-ref-align.c.o.d -o CMakeFiles/sra-sort.dir/xcheck-ref-align.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/xcheck-ref-align.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/build.make tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 57%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/ztr-illumina.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/ztr-illumina.c.o -MF CMakeFiles/srf-load.dir/ztr-illumina.c.o.d -o CMakeFiles/srf-load.dir/ztr-illumina.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/ztr-illumina.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sra-sort-cg.dir/link.d "CMakeFiles/sra-sort-cg.dir/caps.c.o" "CMakeFiles/sra-sort-cg.dir/mem.c.o" "CMakeFiles/sra-sort-cg.dir/membank.c.o" "CMakeFiles/sra-sort-cg.dir/paged-membank.c.o" "CMakeFiles/sra-sort-cg.dir/paged-mmapbank.c.o" "CMakeFiles/sra-sort-cg.dir/except.c.o" "CMakeFiles/sra-sort-cg.dir/idx-mapping.c.o" "CMakeFiles/sra-sort-cg.dir/map-file.c.o" "CMakeFiles/sra-sort-cg.dir/col-pair.c.o" "CMakeFiles/sra-sort-cg.dir/row-set.c.o" "CMakeFiles/sra-sort-cg.dir/simple-row-set.c.o" "CMakeFiles/sra-sort-cg.dir/mapping-row-set.c.o" "CMakeFiles/sra-sort-cg.dir/sorting-row-set.c.o" "CMakeFiles/sra-sort-cg.dir/meta-pair.c.o" "CMakeFiles/sra-sort-cg.dir/dir-pair.c.o" "CMakeFiles/sra-sort-cg.dir/tbl-pair.c.o" "CMakeFiles/sra-sort-cg.dir/db-pair.c.o" "CMakeFiles/sra-sort-cg.dir/glob-poslen.c.o" "CMakeFiles/sra-sort-cg.dir/poslen-col-pair.c.o" "CMakeFiles/sra-sort-cg.dir/ref-alignid-col.c.o" "CMakeFiles/sra-sort-cg.dir/buff-writer.c.o" "CMakeFiles/sra-sort-cg.dir/id-mapper-col.c.o" "CMakeFiles/sra-sort-cg.dir/capture-first-half-aligned.c.o" "CMakeFiles/sra-sort-cg.dir/run.c.o" "CMakeFiles/sra-sort-cg.dir/sra-sort.c.o" "CMakeFiles/sra-sort-cg.dir/xcheck-ref-align.c.o" "CMakeFiles/sra-sort-cg.dir/csra-tbl.c.o" "CMakeFiles/sra-sort-cg.dir/csra-pair.c.o" -o ../../../bin/sra-sort-cg  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lbz2 -llzma
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f sra-sort-cg.3.0.9
[ 57%] Building C object tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/pstring.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/pstring.c.o -MF CMakeFiles/pacbio-loadxml.dir/pstring.c.o.d -o CMakeFiles/pacbio-loadxml.dir/pstring.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/pstring.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv sra-sort-cg sra-sort-cg.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-sort-cg.3.0.9 sra-sort-cg.3
[ 57%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/csra-tbl.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-sort-cg.3 sra-sort-cg
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/csra-tbl.c.o -MF CMakeFiles/sra-sort.dir/csra-tbl.c.o.d -o CMakeFiles/sra-sort.dir/csra-tbl.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/csra-tbl.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 57%] Built target sra-sort-cg
make  -f tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/build.make tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/build.make tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 57%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/hdf5/hdf5arrayfile.c.o
[ 57%] Building C object tools/loaders/sra-load/CMakeFiles/illumina-load.dir/run-xml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/hdf5/hdf5arrayfile.c.o -MF CMakeFiles/pacbio-load.dir/hdf5/hdf5arrayfile.c.o.d -o CMakeFiles/pacbio-load.dir/hdf5/hdf5arrayfile.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load/hdf5/hdf5arrayfile.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/illumina-load.dir/run-xml.c.o -MF CMakeFiles/illumina-load.dir/run-xml.c.o.d -o CMakeFiles/illumina-load.dir/run-xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/run-xml.c
[ 58%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/csra-pair.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/csra-pair.c.o -MF CMakeFiles/sra-sort.dir/csra-pair.c.o.d -o CMakeFiles/sra-sort.dir/csra-pair.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-sort/csra-pair.c
[ 58%] Building C object tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/common-xml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/common-xml.c.o -MF CMakeFiles/pacbio-loadxml.dir/common-xml.c.o.d -o CMakeFiles/pacbio-loadxml.dir/common-xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/common-xml.c
In file included from /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/./spdlog/fmt/fmt.h:24,
                 from /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/loader-imp.c:100:
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/./spdlog/fmt/bundled/core.h: In instantiation of 'constexpr fmt::v8::detail::value<Context> fmt::v8::detail::make_arg(const T&) [with bool IS_PACKED = true; Context = fmt::v8::basic_format_context<fmt::v8::appender, char>; type <anonymous> = fmt::v8::detail::type::string_type; T = fmt::v8::basic_string_view<char>; typename std::enable_if<IS_PACKED, int>::type <anonymous> = 0]':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/./spdlog/fmt/bundled/core.h:1694:64:   required from 'constexpr fmt::v8::format_arg_store<Context, Args>::format_arg_store(const Args& ...) [with Context = fmt::v8::basic_format_context<fmt::v8::appender, char>; Args = {fmt::v8::basic_string_view<char>, char [3]}]'
 1692 |         data_{detail::make_arg<
      |               ~~~~~~~~~~~~~~~~~                                 
 1693 |             is_packed, Context,
      |             ~~~~~~~~~~~~~~~~~~~                                 
 1694 |             detail::mapped_type_constant<Args, Context>::value>(args)...} {
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/./spdlog/fmt/bundled/core.h:1710:18:   required from 'OutputIt fmt::v8::format_to(OutputIt, format_string<T ...>, T&& ...) [with OutputIt = appender; T = {basic_string_view<char>&, const char (&)[3]}; typename std::enable_if<detail::is_output_iterator<OutputIt, char>::value, int>::type <anonymous> = 0; format_string<T ...> = basic_format_string<char, basic_string_view<char>&, const char (&)[3]>]'
 1710 |   return {args...};
      |                  ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/./spdlog/fmt/bundled/format-inl.h:74:14:   required from here
   74 |     format_to(it, FMT_STRING("{}{}"), message, SEP);
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/./spdlog/fmt/bundled/core.h:2915:52:   in 'constexpr' expansion of 'fmt::v8::make_format_args<>(((const fmt::v8::basic_string_view<char>&)args#0), args#1)'
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/./spdlog/fmt/bundled/core.h:1566:15: warning: possibly dangling reference to a temporary [-Wdangling-reference]
 1566 |   const auto& arg = arg_mapper<Context>().map(val);
      |               ^~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/./spdlog/fmt/bundled/core.h:1566:46: note: the temporary was destroyed at the end of the full expression 'fmt::v8::detail::arg_mapper<fmt::v8::basic_format_context<fmt::v8::appender, char> >().fmt::v8::detail::arg_mapper<fmt::v8::basic_format_context<fmt::v8::appender, char> >::map<fmt::v8::basic_string_view<char> >((* & val))'
 1566 |   const auto& arg = arg_mapper<Context>().map(val);
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
[ 59%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/hdf5/hdf5dir.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/hdf5/hdf5dir.c.o -MF CMakeFiles/pacbio-load.dir/hdf5/hdf5dir.c.o.d -o CMakeFiles/pacbio-load.dir/hdf5/hdf5dir.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load/hdf5/hdf5dir.c
[ 59%] Building C object tools/loaders/sra-load/CMakeFiles/helicos-load.dir/loader-file.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/helicos-load.dir/loader-file.c.o -MF CMakeFiles/helicos-load.dir/loader-file.c.o.d -o CMakeFiles/helicos-load.dir/loader-file.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader-file.c
[ 59%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/hdf5/hdf5file.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/hdf5/hdf5file.c.o -MF CMakeFiles/pacbio-load.dir/hdf5/hdf5file.c.o.d -o CMakeFiles/pacbio-load.dir/hdf5/hdf5file.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load/hdf5/hdf5file.c
[ 59%] Building C object tools/loaders/sra-load/CMakeFiles/helicos-load.dir/loader-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/helicos-load.dir/loader-fmt.c.o -MF CMakeFiles/helicos-load.dir/loader-fmt.c.o.d -o CMakeFiles/helicos-load.dir/loader-fmt.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader-fmt.c
[ 59%] Linking C executable ../../../bin/sra-sort
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cmake -E cmake_link_script CMakeFiles/sra-sort.dir/link.txt --verbose=1
[ 59%] Building C object tools/loaders/sra-load/CMakeFiles/helicos-load.dir/sra-writer.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -Wno-stringop-truncation -MD -MT tools/loaders/sra-load/CMakeFiles/helicos-load.dir/sra-writer.c.o -MF CMakeFiles/helicos-load.dir/sra-writer.c.o.d -o CMakeFiles/helicos-load.dir/sra-writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/sra-writer.c
[ 59%] Building C object tools/loaders/sra-load/CMakeFiles/illumina-load.dir/loader-file.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/illumina-load.dir/loader-file.c.o -MF CMakeFiles/illumina-load.dir/loader-file.c.o.d -o CMakeFiles/illumina-load.dir/loader-file.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader-file.c
[ 59%] Building C object tools/loaders/sra-load/CMakeFiles/helicos-load.dir/loader.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/helicos-load.dir/loader.c.o -MF CMakeFiles/helicos-load.dir/loader.c.o.d -o CMakeFiles/helicos-load.dir/loader.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sra-sort.dir/link.d "CMakeFiles/sra-sort.dir/caps.c.o" "CMakeFiles/sra-sort.dir/mem.c.o" "CMakeFiles/sra-sort.dir/membank.c.o" "CMakeFiles/sra-sort.dir/paged-membank.c.o" "CMakeFiles/sra-sort.dir/paged-mmapbank.c.o" "CMakeFiles/sra-sort.dir/except.c.o" "CMakeFiles/sra-sort.dir/idx-mapping.c.o" "CMakeFiles/sra-sort.dir/map-file.c.o" "CMakeFiles/sra-sort.dir/col-pair.c.o" "CMakeFiles/sra-sort.dir/row-set.c.o" "CMakeFiles/sra-sort.dir/simple-row-set.c.o" "CMakeFiles/sra-sort.dir/mapping-row-set.c.o" "CMakeFiles/sra-sort.dir/sorting-row-set.c.o" "CMakeFiles/sra-sort.dir/meta-pair.c.o" "CMakeFiles/sra-sort.dir/dir-pair.c.o" "CMakeFiles/sra-sort.dir/tbl-pair.c.o" "CMakeFiles/sra-sort.dir/db-pair.c.o" "CMakeFiles/sra-sort.dir/glob-poslen.c.o" "CMakeFiles/sra-sort.dir/poslen-col-pair.c.o" "CMakeFiles/sra-sort.dir/ref-alignid-col.c.o" "CMakeFiles/sra-sort.dir/buff-writer.c.o" "CMakeFiles/sra-sort.dir/id-mapper-col.c.o" "CMakeFiles/sra-sort.dir/capture-first-half-aligned.c.o" "CMakeFiles/sra-sort.dir/run.c.o" "CMakeFiles/sra-sort.dir/sra-sort.c.o" "CMakeFiles/sra-sort.dir/xcheck-ref-align.c.o" "CMakeFiles/sra-sort.dir/csra-tbl.c.o" "CMakeFiles/sra-sort.dir/csra-pair.c.o" -o ../../../bin/sra-sort  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lbz2 -llzma
[ 59%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-context.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f sra-sort.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-context.c.o -MF CMakeFiles/pacbio-load.dir/pl-context.c.o.d -o CMakeFiles/pacbio-load.dir/pl-context.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load/pl-context.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv sra-sort sra-sort.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-sort.3.0.9 sra-sort.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-sort.3 sra-sort
[ 59%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-tools.c.o
[ 59%] Building C object tools/loaders/sra-load/CMakeFiles/illumina-load.dir/loader-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-tools.c.o -MF CMakeFiles/pacbio-load.dir/pl-tools.c.o.d -o CMakeFiles/pacbio-load.dir/pl-tools.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load/pl-tools.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/illumina-load.dir/loader-fmt.c.o -MF CMakeFiles/illumina-load.dir/loader-fmt.c.o.d -o CMakeFiles/illumina-load.dir/loader-fmt.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader-fmt.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader.c: In function 'WriteSoftwareVersionsMeta':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader.c:889:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  889 |         rc = KLoaderMeta_Write(node, argv0, __DATE__, fe_name, fe_version);
      |                                             ^~~~~~~~
[ 59%] Built target sra-sort
make  -f tools/loaders/cg-load/CMakeFiles/cg-load.dir/build.make tools/loaders/cg-load/CMakeFiles/cg-load.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load/CMakeFiles/cg-load.dir/DependInfo.cmake "--color="
[ 59%] Building C object tools/loaders/sra-load/CMakeFiles/helicos-load.dir/writer-helicos.c.o
[ 59%] Building C object tools/loaders/sra-load/CMakeFiles/illumina-load.dir/sra-writer.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/helicos-load.dir/writer-helicos.c.o -MF CMakeFiles/helicos-load.dir/writer-helicos.c.o.d -o CMakeFiles/helicos-load.dir/writer-helicos.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/writer-helicos.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -Wno-stringop-truncation -MD -MT tools/loaders/sra-load/CMakeFiles/illumina-load.dir/sra-writer.c.o -MF CMakeFiles/illumina-load.dir/sra-writer.c.o.d -o CMakeFiles/illumina-load.dir/sra-writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/sra-writer.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/cg-load/CMakeFiles/cg-load.dir/build.make tools/loaders/cg-load/CMakeFiles/cg-load.dir/build
[ 59%] Building C object tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/experiment-xml.c.o
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/experiment-xml.c.o -MF CMakeFiles/pacbio-loadxml.dir/experiment-xml.c.o.d -o CMakeFiles/pacbio-loadxml.dir/experiment-xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/experiment-xml.c
[ 59%] Building C object tools/loaders/sra-load/CMakeFiles/illumina-load.dir/loader.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/illumina-load.dir/loader.c.o -MF CMakeFiles/illumina-load.dir/loader.c.o.d -o CMakeFiles/illumina-load.dir/loader.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader.c
[ 60%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/cg-load.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/cg-load.c.o -MF CMakeFiles/cg-load.dir/cg-load.c.o.d -o CMakeFiles/cg-load.dir/cg-load.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/cg-load.c
[ 60%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-zmw.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-zmw.c.o -MF CMakeFiles/pacbio-load.dir/pl-zmw.c.o.d -o CMakeFiles/pacbio-load.dir/pl-zmw.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load/pl-zmw.c
[ 60%] Building C object tools/loaders/sra-load/CMakeFiles/helicos-load.dir/helicos-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/helicos-load.dir/helicos-fmt.c.o -MF CMakeFiles/helicos-load.dir/helicos-fmt.c.o.d -o CMakeFiles/helicos-load.dir/helicos-fmt.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/helicos-fmt.c
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader.c: In function 'WriteSoftwareVersionsMeta':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader.c:889:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  889 |         rc = KLoaderMeta_Write(node, argv0, __DATE__, fe_name, fe_version);
      |                                             ^~~~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/cg-load.c: In function 'DB_Fini':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/cg-load.c:229:65: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  229 |                     if( (rc = KLoaderMeta_Write(node, p->argv0, __DATE__, "Complete Genomics", KAppVersion())) != 0 ) {
      |                                                                 ^~~~~~~~
[ 60%] Building C object tools/loaders/sra-load/CMakeFiles/illumina-load.dir/writer-illumina.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/illumina-load.dir/writer-illumina.c.o -MF CMakeFiles/illumina-load.dir/writer-illumina.c.o.d -o CMakeFiles/illumina-load.dir/writer-illumina.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/writer-illumina.c
[ 60%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-basecalls_cmn.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-basecalls_cmn.c.o -MF CMakeFiles/pacbio-load.dir/pl-basecalls_cmn.c.o.d -o CMakeFiles/pacbio-load.dir/pl-basecalls_cmn.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load/pl-basecalls_cmn.c
[ 60%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/srf-illumina.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/srf-illumina.c.o -MF CMakeFiles/srf-load.dir/srf-illumina.c.o.d -o CMakeFiles/srf-load.dir/srf-illumina.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/srf-illumina.c
[ 60%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-sequence.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-sequence.c.o -MF CMakeFiles/pacbio-load.dir/pl-sequence.c.o.d -o CMakeFiles/pacbio-load.dir/pl-sequence.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load/pl-sequence.c
[ 60%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-consensus.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-consensus.c.o -MF CMakeFiles/pacbio-load.dir/pl-consensus.c.o.d -o CMakeFiles/pacbio-load.dir/pl-consensus.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load/pl-consensus.c
[ 60%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-passes.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-passes.c.o -MF CMakeFiles/pacbio-load.dir/pl-passes.c.o.d -o CMakeFiles/pacbio-load.dir/pl-passes.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load/pl-passes.c
[ 60%] Linking C executable ../../../bin/helicos-load
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cmake -E cmake_link_script CMakeFiles/helicos-load.dir/link.txt --verbose=1
[ 60%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/writer-absolid.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/writer-absolid.c.o -MF CMakeFiles/srf-load.dir/writer-absolid.c.o.d -o CMakeFiles/srf-load.dir/writer-absolid.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/writer-absolid.c
[ 60%] Building C object tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/run-xml.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/run-xml.c.o -MF CMakeFiles/pacbio-loadxml.dir/run-xml.c.o.d -o CMakeFiles/pacbio-loadxml.dir/run-xml.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/run-xml.c
[ 61%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-metrics.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-metrics.c.o -MF CMakeFiles/pacbio-load.dir/pl-metrics.c.o.d -o CMakeFiles/pacbio-load.dir/pl-metrics.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load/pl-metrics.c
[ 62%] Building C object tools/loaders/sra-load/CMakeFiles/illumina-load.dir/illumina-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/illumina-load.dir/illumina-fmt.c.o -MF CMakeFiles/illumina-load.dir/illumina-fmt.c.o.d -o CMakeFiles/illumina-load.dir/illumina-fmt.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/illumina-fmt.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/helicos-load.dir/link.d "CMakeFiles/helicos-load.dir/pstring.c.o" "CMakeFiles/helicos-load.dir/common-xml.c.o" "CMakeFiles/helicos-load.dir/experiment-xml.c.o" "CMakeFiles/helicos-load.dir/run-xml.c.o" "CMakeFiles/helicos-load.dir/loader-file.c.o" "CMakeFiles/helicos-load.dir/loader-fmt.c.o" "CMakeFiles/helicos-load.dir/sra-writer.c.o" "CMakeFiles/helicos-load.dir/loader.c.o" "CMakeFiles/helicos-load.dir/writer-helicos.c.o" "CMakeFiles/helicos-load.dir/helicos-fmt.c.o" -o ../../../bin/helicos-load  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm ../../../ilib/libkxml.a /usr/lib/aarch64-linux-gnu/libxml2.so
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f helicos-load.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv helicos-load helicos-load.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s helicos-load.3.0.9 helicos-load.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s helicos-load.3 helicos-load
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 62%] Built target helicos-load
[ 62%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-regions.c.o
make  -f tools/loaders/general-loader/CMakeFiles/general-loader.dir/build.make tools/loaders/general-loader/CMakeFiles/general-loader.dir/depend
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-regions.c.o -MF CMakeFiles/pacbio-load.dir/pl-regions.c.o.d -o CMakeFiles/pacbio-load.dir/pl-regions.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load/pl-regions.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/CMakeFiles/general-loader.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/general-loader/CMakeFiles/general-loader.dir/build.make tools/loaders/general-loader/CMakeFiles/general-loader.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 62%] Building CXX object tools/loaders/general-loader/CMakeFiles/general-loader.dir/general-loader.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/loaders/general-loader/CMakeFiles/general-loader.dir/general-loader.cpp.o -MF CMakeFiles/general-loader.dir/general-loader.cpp.o.d -o CMakeFiles/general-loader.dir/general-loader.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/general-loader.cpp
[ 63%] Building C object tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/loader-file.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/loader-file.c.o -MF CMakeFiles/pacbio-loadxml.dir/loader-file.c.o.d -o CMakeFiles/pacbio-loadxml.dir/loader-file.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader-file.c
[ 63%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-progress.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-progress.c.o -MF CMakeFiles/pacbio-load.dir/pl-progress.c.o.d -o CMakeFiles/pacbio-load.dir/pl-progress.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load/pl-progress.c
[ 63%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/ztr-absolid.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/ztr-absolid.c.o -MF CMakeFiles/srf-load.dir/ztr-absolid.c.o.d -o CMakeFiles/srf-load.dir/ztr-absolid.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/ztr-absolid.c
[ 63%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/factory-evidence-intervals.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/factory-evidence-intervals.c.o -MF CMakeFiles/cg-load.dir/factory-evidence-intervals.c.o.d -o CMakeFiles/cg-load.dir/factory-evidence-intervals.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/factory-evidence-intervals.c
[ 63%] Building C object tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/loader-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/loader-fmt.c.o -MF CMakeFiles/pacbio-loadxml.dir/loader-fmt.c.o.d -o CMakeFiles/pacbio-loadxml.dir/loader-fmt.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader-fmt.c
[ 63%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pacbio-load.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pacbio-load.c.o -MF CMakeFiles/pacbio-load.dir/pacbio-load.c.o.d -o CMakeFiles/pacbio-load.dir/pacbio-load.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load/pacbio-load.c
[ 63%] Linking C executable ../../../bin/illumina-load
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cmake -E cmake_link_script CMakeFiles/illumina-load.dir/link.txt --verbose=1
[ 63%] Building C object tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/sra-writer.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -Wno-stringop-truncation -MD -MT tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/sra-writer.c.o -MF CMakeFiles/pacbio-loadxml.dir/sra-writer.c.o.d -o CMakeFiles/pacbio-loadxml.dir/sra-writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/sra-writer.c
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load/pacbio-load.c: In function 'pacbio_meta_entry':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/pacbio-load/pacbio-load.c:219:53: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  219 |             rc = KLoaderMeta_Write( node, toolname, __DATE__, "PacBio HDF5", KAppVersion() );
      |                                                     ^~~~~~~~
[ 63%] Building C object tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/loader.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/loader.c.o -MF CMakeFiles/pacbio-loadxml.dir/loader.c.o.d -o CMakeFiles/pacbio-loadxml.dir/loader.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/illumina-load.dir/link.d "CMakeFiles/illumina-load.dir/pstring.c.o" "CMakeFiles/illumina-load.dir/common-xml.c.o" "CMakeFiles/illumina-load.dir/experiment-xml.c.o" "CMakeFiles/illumina-load.dir/run-xml.c.o" "CMakeFiles/illumina-load.dir/loader-file.c.o" "CMakeFiles/illumina-load.dir/loader-fmt.c.o" "CMakeFiles/illumina-load.dir/sra-writer.c.o" "CMakeFiles/illumina-load.dir/loader.c.o" "CMakeFiles/illumina-load.dir/writer-illumina.c.o" "CMakeFiles/illumina-load.dir/illumina-fmt.c.o" -o ../../../bin/illumina-load  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm ../../../ilib/libkxml.a /usr/lib/aarch64-linux-gnu/libxml2.so
[ 63%] Building C object tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/pacbio-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f illumina-load.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/pacbio-fmt.c.o -MF CMakeFiles/pacbio-loadxml.dir/pacbio-fmt.c.o.d -o CMakeFiles/pacbio-loadxml.dir/pacbio-fmt.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/pacbio-fmt.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv illumina-load illumina-load.3.0.9
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader.c: In function 'WriteSoftwareVersionsMeta':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/loader.c:889:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  889 |         rc = KLoaderMeta_Write(node, argv0, __DATE__, fe_name, fe_version);
      |                                             ^~~~~~~~
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s illumina-load.3.0.9 illumina-load.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s illumina-load.3 illumina-load
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/general-loader/test/CMakeFiles/test-general-loader.dir/build.make tools/loaders/general-loader/test/CMakeFiles/test-general-loader.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/CMakeFiles/test-general-loader.dir/DependInfo.cmake "--color="
[ 63%] Built target illumina-load
make  -f tools/loaders/general-loader/test/CMakeFiles/test-gw-dumper.dir/build.make tools/loaders/general-loader/test/CMakeFiles/test-gw-dumper.dir/depend
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/CMakeFiles/test-gw-dumper.dir/DependInfo.cmake "--color="
make  -f tools/loaders/general-loader/test/CMakeFiles/test-general-loader.dir/build.make tools/loaders/general-loader/test/CMakeFiles/test-general-loader.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/general-loader/test/CMakeFiles/test-gw-dumper.dir/build.make tools/loaders/general-loader/test/CMakeFiles/test-gw-dumper.dir/build
[ 64%] Building CXX object tools/loaders/general-loader/test/CMakeFiles/test-general-loader.dir/test-general-loader.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/.. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/loaders/general-loader/test/CMakeFiles/test-general-loader.dir/test-general-loader.cpp.o -MF CMakeFiles/test-general-loader.dir/test-general-loader.cpp.o.d -o CMakeFiles/test-general-loader.dir/test-general-loader.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/test-general-loader.cpp
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 64%] Building CXX object tools/loaders/general-loader/test/CMakeFiles/test-gw-dumper.dir/test-gw-dumper.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/.. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/loaders/general-loader/test/CMakeFiles/test-gw-dumper.dir/test-gw-dumper.cpp.o -MF CMakeFiles/test-gw-dumper.dir/test-gw-dumper.cpp.o.d -o CMakeFiles/test-gw-dumper.dir/test-gw-dumper.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/test-gw-dumper.cpp
[ 64%] Building CXX object tools/loaders/general-loader/test/CMakeFiles/test-general-loader.dir/testsource.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/.. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/loaders/general-loader/test/CMakeFiles/test-general-loader.dir/testsource.cpp.o -MF CMakeFiles/test-general-loader.dir/testsource.cpp.o.d -o CMakeFiles/test-general-loader.dir/testsource.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/testsource.cpp
[ 64%] Building CXX object tools/loaders/general-loader/CMakeFiles/general-loader.dir/protocol-parser.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/loaders/general-loader/CMakeFiles/general-loader.dir/protocol-parser.cpp.o -MF CMakeFiles/general-loader.dir/protocol-parser.cpp.o.d -o CMakeFiles/general-loader.dir/protocol-parser.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/protocol-parser.cpp
[ 65%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/ztr-huffman.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/ztr-huffman.c.o -MF CMakeFiles/srf-load.dir/ztr-huffman.c.o.d -o CMakeFiles/srf-load.dir/ztr-huffman.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/ztr-huffman.c
In file included from /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/test-general-loader.cpp:32:
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/../database-loader.cpp:699:90: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  699 |                         rc = KLoaderMeta_WriteWithVersion ( node, m_programName.c_str(), __DATE__, KAppVersion(), m_softwareName.c_str(), m_softwareVersion );
      |                                                                                          ^~~~~~~~
[ 65%] Linking C executable ../../../bin/pacbio-load
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/test-general-loader.cpp:619:86: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  619 |     REQUIRE_EQ ( string ( __DATE__), GetDbMetadataAttr ( "SOFTWARE/loader", "date" ) );
      |                                                                                      ^
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cmake -E cmake_link_script CMakeFiles/pacbio-load.dir/link.txt --verbose=1
[ 65%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/factory-evidence-dnbs.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/factory-evidence-dnbs.c.o -MF CMakeFiles/cg-load.dir/factory-evidence-dnbs.c.o.d -o CMakeFiles/cg-load.dir/factory-evidence-dnbs.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/factory-evidence-dnbs.c
[ 65%] Building CXX object tools/loaders/general-loader/CMakeFiles/general-loader.dir/database-loader.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/loaders/general-loader/CMakeFiles/general-loader.dir/database-loader.cpp.o -MF CMakeFiles/general-loader.dir/database-loader.cpp.o.d -o CMakeFiles/general-loader.dir/database-loader.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/database-loader.cpp
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/database-loader.cpp:699:90: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  699 |                         rc = KLoaderMeta_WriteWithVersion ( node, m_programName.c_str(), __DATE__, KAppVersion(), m_softwareName.c_str(), m_softwareVersion );
      |                                                                                          ^~~~~~~~
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/pacbio-load.dir/link.d "CMakeFiles/pacbio-load.dir/hdf5/hdf5arrayfile.c.o" "CMakeFiles/pacbio-load.dir/hdf5/hdf5dir.c.o" "CMakeFiles/pacbio-load.dir/hdf5/hdf5file.c.o" "CMakeFiles/pacbio-load.dir/pl-context.c.o" "CMakeFiles/pacbio-load.dir/pl-tools.c.o" "CMakeFiles/pacbio-load.dir/pl-zmw.c.o" "CMakeFiles/pacbio-load.dir/pl-basecalls_cmn.c.o" "CMakeFiles/pacbio-load.dir/pl-sequence.c.o" "CMakeFiles/pacbio-load.dir/pl-consensus.c.o" "CMakeFiles/pacbio-load.dir/pl-passes.c.o" "CMakeFiles/pacbio-load.dir/pl-metrics.c.o" "CMakeFiles/pacbio-load.dir/pl-regions.c.o" "CMakeFiles/pacbio-load.dir/pl-progress.c.o" "CMakeFiles/pacbio-load.dir/pacbio-load.c.o" -o ../../../bin/pacbio-load  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/aarch64-linux-gnu/libcrypto.so /usr/lib/aarch64-linux-gnu/libcurl.so /usr/lib/aarch64-linux-gnu/libpthread.a /usr/lib/aarch64-linux-gnu/libsz.so /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libdl.a -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f pacbio-load.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv pacbio-load pacbio-load.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s pacbio-load.3.0.9 pacbio-load.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s pacbio-load.3 pacbio-load
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 65%] Built target pacbio-load
make  -f tools/loaders/general-loader/test/CMakeFiles/makeinputs.dir/build.make tools/loaders/general-loader/test/CMakeFiles/makeinputs.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/CMakeFiles/makeinputs.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/general-loader/test/CMakeFiles/makeinputs.dir/build.make tools/loaders/general-loader/test/CMakeFiles/makeinputs.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 65%] Building CXX object tools/loaders/general-loader/test/CMakeFiles/makeinputs.dir/makeinputs.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/.. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/loaders/general-loader/test/CMakeFiles/makeinputs.dir/makeinputs.cpp.o -MF CMakeFiles/makeinputs.dir/makeinputs.cpp.o.d -o CMakeFiles/makeinputs.dir/makeinputs.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/makeinputs.cpp
[ 65%] Linking C executable ../../../bin/pacbio-loadxml
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cmake -E cmake_link_script CMakeFiles/pacbio-loadxml.dir/link.txt --verbose=1
[ 65%] Linking CXX executable ../../../../test-bin/test-gw-dumper
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-gw-dumper.dir/link.txt --verbose=1
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/pacbio-loadxml.dir/link.d "CMakeFiles/pacbio-loadxml.dir/pstring.c.o" "CMakeFiles/pacbio-loadxml.dir/common-xml.c.o" "CMakeFiles/pacbio-loadxml.dir/experiment-xml.c.o" "CMakeFiles/pacbio-loadxml.dir/run-xml.c.o" "CMakeFiles/pacbio-loadxml.dir/loader-file.c.o" "CMakeFiles/pacbio-loadxml.dir/loader-fmt.c.o" "CMakeFiles/pacbio-loadxml.dir/sra-writer.c.o" "CMakeFiles/pacbio-loadxml.dir/loader.c.o" "CMakeFiles/pacbio-loadxml.dir/pacbio-fmt.c.o" -o ../../../bin/pacbio-loadxml  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm ../../../ilib/libkxml.a /usr/lib/aarch64-linux-gnu/libxml2.so
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f pacbio-loadxml.3.0.9
[ 65%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/srf-absolid.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/srf-absolid.c.o -MF CMakeFiles/srf-load.dir/srf-absolid.c.o.d -o CMakeFiles/srf-load.dir/srf-absolid.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/sra-load/srf-absolid.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv pacbio-loadxml pacbio-loadxml.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s pacbio-loadxml.3.0.9 pacbio-loadxml.3
[ 65%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/proc.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s pacbio-loadxml.3 pacbio-loadxml
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-gw-dumper.dir/link.d "CMakeFiles/test-gw-dumper.dir/test-gw-dumper.cpp.o" -o ../../../../test-bin/test-gw-dumper  ../../../../ilib/libgeneral-writer.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/proc.cpp.o -MF CMakeFiles/sratools.dir/proc.cpp.o.d -o CMakeFiles/sratools.dir/proc.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/proc.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 65%] Built target test-gw-dumper
[ 65%] Built target pacbio-loadxml
make  -f tools/loaders/general-loader/test/vschema/CMakeFiles/bio-end-makeinputs.dir/build.make tools/loaders/general-loader/test/vschema/CMakeFiles/bio-end-makeinputs.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema/CMakeFiles/bio-end-makeinputs.dir/DependInfo.cmake "--color="
[ 65%] Building CXX object tools/loaders/general-loader/test/CMakeFiles/makeinputs.dir/testsource.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/.. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/loaders/general-loader/test/CMakeFiles/makeinputs.dir/testsource.cpp.o -MF CMakeFiles/makeinputs.dir/testsource.cpp.o.d -o CMakeFiles/makeinputs.dir/testsource.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/testsource.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/general-loader/test/vschema/CMakeFiles/bio-end-makeinputs.dir/build.make tools/loaders/general-loader/test/vschema/CMakeFiles/bio-end-makeinputs.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 65%] Building CXX object tools/loaders/general-loader/test/vschema/CMakeFiles/bio-end-makeinputs.dir/bio-end/makeinputs.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/.. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/loaders/general-loader/test/vschema/CMakeFiles/bio-end-makeinputs.dir/bio-end/makeinputs.cpp.o -MF CMakeFiles/bio-end-makeinputs.dir/bio-end/makeinputs.cpp.o.d -o CMakeFiles/bio-end-makeinputs.dir/bio-end/makeinputs.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/bio-end/makeinputs.cpp
[ 65%] Linking C executable ../../../bin/srf-load
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cmake -E cmake_link_script CMakeFiles/srf-load.dir/link.txt --verbose=1
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/testsource.cpp: In constructor 'TestSource::Buffer::Buffer(const std::string&, uint32_t, uint32_t, bool)':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/testsource.cpp:52:13: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' specified bound 8 equals destination size [-Wstringop-truncation]
   52 |     strncpy ( m_header . dad . signature, p_signature . c_str(), sizeof m_header . dad . signature );
      |             ^
[ 65%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/factory-mappings.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/factory-mappings.c.o -MF CMakeFiles/cg-load.dir/factory-mappings.c.o.d -o CMakeFiles/cg-load.dir/factory-mappings.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/factory-mappings.c
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/bio-end/makeinputs.cpp: In function 'void run(const char*, bool, const int32_t*, const int32_t*, const int8_t*, int)':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/bio-end/makeinputs.cpp:76:16: warning: 'gw' may be used uninitialized [-Wmaybe-uninitialized]
   76 |         delete gw;
      |                ^~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/bio-end/makeinputs.cpp:45:20: note: 'gw' was declared here
   45 |     GeneralWriter *gw;
      |                    ^~
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/srf-load.dir/link.d "CMakeFiles/srf-load.dir/pstring.c.o" "CMakeFiles/srf-load.dir/common-xml.c.o" "CMakeFiles/srf-load.dir/experiment-xml.c.o" "CMakeFiles/srf-load.dir/run-xml.c.o" "CMakeFiles/srf-load.dir/loader-file.c.o" "CMakeFiles/srf-load.dir/loader-fmt.c.o" "CMakeFiles/srf-load.dir/sra-writer.c.o" "CMakeFiles/srf-load.dir/loader.c.o" "CMakeFiles/srf-load.dir/srf.c.o" "CMakeFiles/srf-load.dir/srf-fmt.c.o" "CMakeFiles/srf-load.dir/writer-illumina.c.o" "CMakeFiles/srf-load.dir/ztr-illumina.c.o" "CMakeFiles/srf-load.dir/srf-illumina.c.o" "CMakeFiles/srf-load.dir/writer-absolid.c.o" "CMakeFiles/srf-load.dir/ztr-absolid.c.o" "CMakeFiles/srf-load.dir/ztr-huffman.c.o" "CMakeFiles/srf-load.dir/srf-absolid.c.o" -o ../../../bin/srf-load  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm ../../../ilib/libkxml.a /usr/lib/aarch64-linux-gnu/libxml2.so
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f srf-load.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv srf-load srf-load.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s srf-load.3.0.9 srf-load.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s srf-load.3 srf-load
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/factory-mappings.c: In function 'CGMappings15_Read':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/factory-mappings.c:248:16: warning: 'tmp' may be used uninitialized [-Wmaybe-uninitialized]
  248 |         if( tmp[0] < 33 || tmp[0] > 126 ) {
      |             ~~~^~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/factory-mappings.c:225:14: note: 'tmp' declared here
  225 |         char tmp[2];
      |              ^~~
[ 65%] Built target srf-load
make  -f tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-makeinputs.dir/build.make tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-makeinputs.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-makeinputs.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-makeinputs.dir/build.make tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-makeinputs.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/./spdlog/fmt/bundled/core.h: In instantiation of 'constexpr fmt::v8::detail::value<Context> fmt::v8::detail::make_arg(const T&) [with bool IS_PACKED = true; Context = fmt::v8::basic_format_context<fmt::v8::appender, char>; type <anonymous> = fmt::v8::detail::type::string_type; T = std::__cxx11::basic_string<char>; typename std::enable_if<IS_PACKED, int>::type <anonymous> = 0]':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/./spdlog/fmt/bundled/core.h:1694:64:   required from 'constexpr fmt::v8::format_arg_store<Context, Args>::format_arg_store(const Args& ...) [with Context = fmt::v8::basic_format_context<fmt::v8::appender, char>; Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, spdlog::stopwatch, long unsigned int}]'
 1692 |         data_{detail::make_arg<
      |               ~~~~~~~~~~~~~~~~~                                 
 1693 |             is_packed, Context,
      |             ~~~~~~~~~~~~~~~~~~~                                 
 1694 |             detail::mapped_type_constant<Args, Context>::value>(args)...} {
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/./spdlog/fmt/bundled/core.h:1710:18:   required from 'void spdlog::logger::log_(spdlog::source_loc, spdlog::level::level_enum, spdlog::string_view_t, Args&& ...) [with Args = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, spdlog::stopwatch&, long unsigned int}; spdlog::string_view_t = fmt::v8::basic_string_view<char>]'
 1710 |   return {args...};
      |                  ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/./spdlog/logger.h:90:13:   required from 'void spdlog::logger::log(spdlog::source_loc, spdlog::level::level_enum, fmt::v8::format_string<T ...>, Args&& ...) [with Args = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, spdlog::stopwatch&, long unsigned int}; fmt::v8::format_string<T ...> = fmt::v8::basic_format_string<char, const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, spdlog::stopwatch&, long unsigned int>]'
   90 |         log_(loc, lvl, fmt, std::forward<Args>(args)...);
      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/./spdlog/logger.h:96:12:   required from 'void spdlog::logger::log(spdlog::level::level_enum, fmt::v8::format_string<T ...>, Args&& ...) [with Args = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, spdlog::stopwatch&, long unsigned int}; fmt::v8::format_string<T ...> = fmt::v8::basic_format_string<char, const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, spdlog::stopwatch&, long unsigned int>]'
   96 |         log(source_loc{}, lvl, fmt, std::forward<Args>(args)...);
      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/./spdlog/logger.h:158:12:   required from 'void spdlog::logger::info(fmt::v8::format_string<T ...>, Args&& ...) [with Args = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, spdlog::stopwatch&, long unsigned int}; fmt::v8::format_string<T ...> = fmt::v8::basic_format_string<char, const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, spdlog::stopwatch&, long unsigned int>]'
  158 |         log(level::info, fmt, std::forward<Args>(args)...);
      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/./spdlog/spdlog.h:157:31:   required from 'void spdlog::info(fmt::v8::format_string<T ...>, Args&& ...) [with Args = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, stopwatch&, long unsigned int}; fmt::v8::format_string<T ...> = fmt::v8::basic_format_string<char, const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, stopwatch&, long unsigned int>]'
  157 |     default_logger_raw()->info(fmt, std::forward<Args>(args)...);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/spot_assembly.hpp:386:21:   required from here
  386 |         spdlog::info("{} Batch insert: {:.3}, {:L} reads", batch_idx, sw, new_batch.m_spot_map->size());
      |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/./spdlog/logger.h:370:68:   in 'constexpr' expansion of 'fmt::v8::make_format_args<>(args#0, ((const spdlog::stopwatch&)args#1), ((const long unsigned int&)args#2))'
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/./spdlog/fmt/bundled/core.h:1566:15: warning: possibly dangling reference to a temporary [-Wdangling-reference]
 1566 |   const auto& arg = arg_mapper<Context>().map(val);
      |               ^~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/./spdlog/fmt/bundled/core.h:1566:46: note: the temporary was destroyed at the end of the full expression 'fmt::v8::detail::arg_mapper<fmt::v8::basic_format_context<fmt::v8::appender, char> >().fmt::v8::detail::arg_mapper<fmt::v8::basic_format_context<fmt::v8::appender, char> >::map<std::__cxx11::basic_string<char> >((* & val))'
 1566 |   const auto& arg = arg_mapper<Context>().map(val);
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
[ 65%] Building CXX object tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-makeinputs.dir/idx-text/makeinputs.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/.. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-makeinputs.dir/idx-text/makeinputs.cpp.o -MF CMakeFiles/idx-text-makeinputs.dir/idx-text/makeinputs.cpp.o.d -o CMakeFiles/idx-text-makeinputs.dir/idx-text/makeinputs.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/idx-text/makeinputs.cpp
[ 65%] Linking CXX executable ../../../../../test-bin/bio-end-makeinputs
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema && /usr/bin/cmake -E cmake_link_script CMakeFiles/bio-end-makeinputs.dir/link.txt --verbose=1
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/proc.cpp: In function 'void printEnvironment(bool)':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/proc.cpp:67:93: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   67 |     for (auto name : make_sequence(constants::env_var::names(), constants::env_var::END_ENUM))
      |                                                                                             ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/proc.cpp:67:35: note: the temporary was destroyed at the end of the full expression 'make_sequence<const char* const*>(constants::env_var::names(), ((size_t)constants::env_var::END_ENUM))'
   67 |     for (auto name : make_sequence(constants::env_var::names(), constants::env_var::END_ENUM))
      |                      ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/proc.cpp: In function 'void testing_5()':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/proc.cpp:91:93: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   91 |     for (auto name : make_sequence(constants::env_var::names(), constants::env_var::END_ENUM)) {
      |                                                                                             ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/proc.cpp:91:35: note: the temporary was destroyed at the end of the full expression 'make_sequence<const char* const*>(constants::env_var::names(), ((size_t)constants::env_var::END_ENUM))'
   91 |     for (auto name : make_sequence(constants::env_var::names(), constants::env_var::END_ENUM)) {
      |                      ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/factory-mappings.c: In function 'CGMappings22_Read':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/factory-mappings.c:311:16: warning: 'tmp' may be used uninitialized [-Wmaybe-uninitialized]
  311 |         if( tmp[0] < 33 || tmp[0] > 126 ) {
      |             ~~~^~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/factory-mappings.c:287:14: note: 'tmp' declared here
  287 |         char tmp[2];
      |              ^~~
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/bio-end-makeinputs.dir/link.d "CMakeFiles/bio-end-makeinputs.dir/bio-end/makeinputs.cpp.o" -o ../../../../../test-bin/bio-end-makeinputs  ../../../../../ilib/libgeneral-writer.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 65%] Built target bio-end-makeinputs
make  -f tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-checklookup.dir/build.make tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-checklookup.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-checklookup.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-checklookup.dir/build.make tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-checklookup.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 66%] Building CXX object tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-checklookup.dir/idx-text/checklookup.cpp.o
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/factory-mappings.c: In function 'CGMappings25_Read':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/factory-mappings.c:382:16: warning: 'tmp' may be used uninitialized [-Wmaybe-uninitialized]
  382 |         if( tmp[0] < 33 || tmp[0] > 126 ) {
      |             ~~~^~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/factory-mappings.c:358:14: note: 'tmp' declared here
  358 |         char tmp[2];
      |              ^~~
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/.. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-checklookup.dir/idx-text/checklookup.cpp.o -MF CMakeFiles/idx-text-checklookup.dir/idx-text/checklookup.cpp.o.d -o CMakeFiles/idx-text-checklookup.dir/idx-text/checklookup.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/idx-text/checklookup.cpp
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/testsource.cpp: In constructor 'TestSource::Buffer::Buffer(const std::string&, uint32_t, uint32_t, bool)':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/testsource.cpp:52:13: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' specified bound 8 equals destination size [-Wstringop-truncation]
   52 |     strncpy ( m_header . dad . signature, p_signature . c_str(), sizeof m_header . dad . signature );
      |             ^
[ 66%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/factory-reads.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/factory-reads.c.o -MF CMakeFiles/cg-load.dir/factory-reads.c.o.d -o CMakeFiles/cg-load.dir/factory-reads.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/factory-reads.c
[ 66%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/uuid.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/uuid.cpp.o -MF CMakeFiles/sratools.dir/uuid.cpp.o.d -o CMakeFiles/sratools.dir/uuid.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/uuid.cpp
In file included from /usr/include/c++/14/ios:42,
                 from /usr/include/c++/14/ostream:40,
                 from /usr/include/c++/14/iostream:41,
                 from /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc/general-writer/general-writer.hpp:34,
                 from /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/idx-text/makeinputs.cpp:30:
In static member function 'static std::size_t std::char_traits<char>::length(const char_type*)',
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::basic_string(const _CharT*, const _Alloc&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:653:49,
    inlined from 'void run(const char*, TestCaseType, const std::string*, int)' at /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/idx-text/makeinputs.cpp:77:25:
/usr/include/c++/14/bits/char_traits.h:391:32: warning: 'db_schema' may be used uninitialized [-Wmaybe-uninitialized]
  391 |         return __builtin_strlen(__s);
      |                ~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/idx-text/makeinputs.cpp: In function 'void run(const char*, TestCaseType, const std::string*, int)':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/idx-text/makeinputs.cpp:57:21: note: 'db_schema' was declared here
   57 |         const char* db_schema;
      |                     ^~~~~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/idx-text/makeinputs.cpp:101:16: warning: 'gw' may be used uninitialized [-Wmaybe-uninitialized]
  101 |         delete gw;
      |                ^~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/idx-text/makeinputs.cpp:54:20: note: 'gw' was declared here
   54 |     GeneralWriter *gw;
      |                    ^~
[ 67%] Building CXX object tools/loaders/general-loader/CMakeFiles/general-loader.dir/main.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/loaders/general-loader/CMakeFiles/general-loader.dir/main.cpp.o -MF CMakeFiles/general-loader.dir/main.cpp.o.d -o CMakeFiles/general-loader.dir/main.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/main.cpp
[ 67%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/accession.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/accession.cpp.o -MF CMakeFiles/sratools.dir/accession.cpp.o.d -o CMakeFiles/sratools.dir/accession.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/accession.cpp
[ 67%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/factory-tag-lfr.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/factory-tag-lfr.c.o -MF CMakeFiles/cg-load.dir/factory-tag-lfr.c.o.d -o CMakeFiles/cg-load.dir/factory-tag-lfr.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/factory-tag-lfr.c
[ 67%] Linking CXX executable ../../../../../test-bin/idx-text-makeinputs
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema && /usr/bin/cmake -E cmake_link_script CMakeFiles/idx-text-makeinputs.dir/link.txt --verbose=1
[ 67%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/f1_3.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/f1_3.c.o -MF CMakeFiles/cg-load.dir/f1_3.c.o.d -o CMakeFiles/cg-load.dir/f1_3.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/f1_3.c
[ 67%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/service.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/service.cpp.o -MF CMakeFiles/sratools.dir/service.cpp.o.d -o CMakeFiles/sratools.dir/service.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/service.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/idx-text-makeinputs.dir/link.d "CMakeFiles/idx-text-makeinputs.dir/idx-text/makeinputs.cpp.o" -o ../../../../../test-bin/idx-text-makeinputs  ../../../../../ilib/libgeneral-writer.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 67%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/f1_5.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/f1_5.c.o -MF CMakeFiles/cg-load.dir/f1_5.c.o.d -o CMakeFiles/cg-load.dir/f1_5.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/f1_5.c
[ 67%] Built target idx-text-makeinputs
make  -f tools/loaders/vdb-lock/CMakeFiles/vdb-lock.dir/build.make tools/loaders/vdb-lock/CMakeFiles/vdb-lock.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/vdb-lock /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/vdb-lock /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/vdb-lock/CMakeFiles/vdb-lock.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/vdb-lock/CMakeFiles/vdb-lock.dir/build.make tools/loaders/vdb-lock/CMakeFiles/vdb-lock.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 67%] Building C object tools/loaders/vdb-lock/CMakeFiles/vdb-lock.dir/vdb-lock.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/vdb-lock && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-lock\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/vdb-lock/CMakeFiles/vdb-lock.dir/vdb-lock.c.o -MF CMakeFiles/vdb-lock.dir/vdb-lock.c.o.d -o CMakeFiles/vdb-lock.dir/vdb-lock.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/vdb-lock/vdb-lock.c
[ 67%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/f1_7.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/f1_7.c.o -MF CMakeFiles/cg-load.dir/f1_7.c.o.d -o CMakeFiles/cg-load.dir/f1_7.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/f1_7.c
[ 68%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/f2_0.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/f2_0.c.o -MF CMakeFiles/cg-load.dir/f2_0.c.o.d -o CMakeFiles/cg-load.dir/f2_0.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/f2_0.c
[ 68%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/f2_2.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/f2_2.c.o -MF CMakeFiles/cg-load.dir/f2_2.c.o.d -o CMakeFiles/cg-load.dir/f2_2.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/f2_2.c
[ 68%] Linking CXX executable ../../../../test-bin/makeinputs
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/makeinputs.dir/link.txt --verbose=1
[ 68%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/f2_4.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/f2_4.c.o -MF CMakeFiles/cg-load.dir/f2_4.c.o.d -o CMakeFiles/cg-load.dir/f2_4.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/f2_4.c
[ 68%] Linking C executable ../../../bin/vdb-lock
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/vdb-lock && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-lock.dir/link.txt --verbose=1
[ 68%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/f2_5.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/f2_5.c.o -MF CMakeFiles/cg-load.dir/f2_5.c.o.d -o CMakeFiles/cg-load.dir/f2_5.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/f2_5.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-lock.dir/link.d "CMakeFiles/vdb-lock.dir/vdb-lock.c.o" -o ../../../bin/vdb-lock  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/makeinputs.dir/link.d CMakeFiles/makeinputs.dir/makeinputs.cpp.o CMakeFiles/makeinputs.dir/testsource.cpp.o -o ../../../../test-bin/makeinputs  ../../../../ilib/libgeneral-writer.a -lncbi-vdb
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f vdb-lock.3.0.9
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv vdb-lock vdb-lock.3.0.9
[ 68%] Built target makeinputs
[ 68%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/file.c.o
make  -f tools/loaders/vdb-unlock/CMakeFiles/vdb-unlock.dir/build.make tools/loaders/vdb-unlock/CMakeFiles/vdb-unlock.dir/depend
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/file.c.o -MF CMakeFiles/cg-load.dir/file.c.o.d -o CMakeFiles/cg-load.dir/file.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/file.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/vdb-unlock /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/vdb-unlock /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/vdb-unlock/CMakeFiles/vdb-unlock.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-lock.3.0.9 vdb-lock.3
[ 68%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/formats.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/formats.c.o -MF CMakeFiles/cg-load.dir/formats.c.o.d -o CMakeFiles/cg-load.dir/formats.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/formats.c
[ 68%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/file-version-factory.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/file-version-factory.c.o -MF CMakeFiles/cg-load.dir/file-version-factory.c.o.d -o CMakeFiles/cg-load.dir/file-version-factory.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/file-version-factory.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-lock.3 vdb-lock
[ 68%] Linking CXX executable ../../../bin/general-loader
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/general-loader.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
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[ 68%] Building C object tools/loaders/vdb-unlock/CMakeFiles/vdb-unlock.dir/vdb-unlock.c.o
[ 68%] Built target vdb-lock
[ 68%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/writer-algn.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/vdb-unlock && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-unlock\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/vdb-unlock/CMakeFiles/vdb-unlock.dir/vdb-unlock.c.o -MF CMakeFiles/vdb-unlock.dir/vdb-unlock.c.o.d -o CMakeFiles/vdb-unlock.dir/vdb-unlock.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/vdb-unlock/vdb-unlock.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/writer-algn.c.o -MF CMakeFiles/cg-load.dir/writer-algn.c.o.d -o CMakeFiles/cg-load.dir/writer-algn.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/writer-algn.c
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make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
In file included from /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/accession.cpp:36:
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/accession.hpp: In static member function 'static const char* sratools::Accession::qualityTypeFor(const char*)':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/accession.hpp:82:56: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                                                        ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/accession.hpp:82:38: note: the temporary was destroyed at the end of the full expression 'make_sequence<const char**>((& sratools::Accession::extensions[1]), 3)'
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                         ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make  -f tools/internal/align-cache/CMakeFiles/align-cache.dir/build.make tools/internal/align-cache/CMakeFiles/align-cache.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 68%] Building CXX object tools/internal/align-cache/CMakeFiles/align-cache.dir/align-cache.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/align-cache && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/align-cache\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/internal/align-cache/CMakeFiles/align-cache.dir/align-cache.cpp.o -MF CMakeFiles/align-cache.dir/align-cache.cpp.o.d -o CMakeFiles/align-cache.dir/align-cache.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/align-cache/align-cache.cpp
[ 68%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/writer-evidence-dnbs.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/writer-evidence-dnbs.c.o -MF CMakeFiles/cg-load.dir/writer-evidence-dnbs.c.o.d -o CMakeFiles/cg-load.dir/writer-evidence-dnbs.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/writer-evidence-dnbs.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/general-loader.dir/link.d "CMakeFiles/general-loader.dir/general-loader.cpp.o" "CMakeFiles/general-loader.dir/protocol-parser.cpp.o" "CMakeFiles/general-loader.dir/database-loader.cpp.o" "CMakeFiles/general-loader.dir/main.cpp.o" -o ../../../bin/general-loader  ../../../ilib/libgeneral-writer.a ../../../ilib/libloader.a -lkapp ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f general-loader.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv general-loader general-loader.3.0.9
[ 68%] Linking C executable ../../../bin/vdb-unlock
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/vdb-unlock && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-unlock.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s general-loader.3.0.9 general-loader.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s general-loader.3 general-loader
[ 69%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/writer-evidence-intervals.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/writer-evidence-intervals.c.o -MF CMakeFiles/cg-load.dir/writer-evidence-intervals.c.o.d -o CMakeFiles/cg-load.dir/writer-evidence-intervals.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/writer-evidence-intervals.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 69%] Built target general-loader
make  -f tools/internal/ccextract/CMakeFiles/ccextract.dir/build.make tools/internal/ccextract/CMakeFiles/ccextract.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/ccextract /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/ccextract /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/ccextract/CMakeFiles/ccextract.dir/DependInfo.cmake "--color="
[ 69%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/writer-seq.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/writer-seq.c.o -MF CMakeFiles/cg-load.dir/writer-seq.c.o.d -o CMakeFiles/cg-load.dir/writer-seq.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/cg-load/writer-seq.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/ccextract/CMakeFiles/ccextract.dir/build.make tools/internal/ccextract/CMakeFiles/ccextract.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 69%] Building C object tools/internal/ccextract/CMakeFiles/ccextract.dir/ccextract.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/ccextract && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/ccextract\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/ccextract/CMakeFiles/ccextract.dir/ccextract.c.o -MF CMakeFiles/ccextract.dir/ccextract.c.o.d -o CMakeFiles/ccextract.dir/ccextract.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/ccextract/ccextract.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-unlock.dir/link.d "CMakeFiles/vdb-unlock.dir/vdb-unlock.c.o" -o ../../../bin/vdb-unlock  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f vdb-unlock.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv vdb-unlock vdb-unlock.3.0.9
make  -f tools/internal/copycat/CMakeFiles/copycat.dir/build.make tools/internal/copycat/CMakeFiles/copycat.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat/CMakeFiles/copycat.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-unlock.3.0.9 vdb-unlock.3
[ 69%] Building CXX object tools/internal/align-cache/CMakeFiles/align-cache.dir/helper.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/align-cache && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/align-cache\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/internal/align-cache/CMakeFiles/align-cache.dir/helper.cpp.o -MF CMakeFiles/align-cache.dir/helper.cpp.o.d -o CMakeFiles/align-cache.dir/helper.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/align-cache/helper.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-unlock.3 vdb-unlock
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 69%] Linking C executable ../../../bin/cg-load
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cmake -E cmake_link_script CMakeFiles/cg-load.dir/link.txt --verbose=1
make  -f tools/internal/copycat/CMakeFiles/copycat.dir/build.make tools/internal/copycat/CMakeFiles/copycat.dir/build
[ 69%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/json-parse.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/json-parse.cpp.o -MF CMakeFiles/sratools.dir/json-parse.cpp.o.d -o CMakeFiles/sratools.dir/json-parse.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/json-parse.cpp
[ 69%] Built target vdb-unlock
make  -f tools/internal/make-read-filter/CMakeFiles/make-read-filter.dir/build.make tools/internal/make-read-filter/CMakeFiles/make-read-filter.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/make-read-filter /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/make-read-filter /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/make-read-filter/CMakeFiles/make-read-filter.dir/DependInfo.cmake "--color="
[ 69%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/copycat.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/copycat.c.o -MF CMakeFiles/copycat.dir/copycat.c.o.d -o CMakeFiles/copycat.dir/copycat.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat/copycat.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/make-read-filter/CMakeFiles/make-read-filter.dir/build.make tools/internal/make-read-filter/CMakeFiles/make-read-filter.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 69%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/SDL-response.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/SDL-response.cpp.o -MF CMakeFiles/sratools.dir/SDL-response.cpp.o.d -o CMakeFiles/sratools.dir/SDL-response.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/SDL-response.cpp
[ 69%] Linking CXX executable ../../../../../test-bin/idx-text-checklookup
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/cg-load.dir/link.d "CMakeFiles/cg-load.dir/cg-load.c.o" "CMakeFiles/cg-load.dir/factory-evidence-intervals.c.o" "CMakeFiles/cg-load.dir/factory-evidence-dnbs.c.o" "CMakeFiles/cg-load.dir/factory-mappings.c.o" "CMakeFiles/cg-load.dir/factory-reads.c.o" "CMakeFiles/cg-load.dir/factory-tag-lfr.c.o" "CMakeFiles/cg-load.dir/f1_3.c.o" "CMakeFiles/cg-load.dir/f1_5.c.o" "CMakeFiles/cg-load.dir/f1_7.c.o" "CMakeFiles/cg-load.dir/f2_0.c.o" "CMakeFiles/cg-load.dir/f2_2.c.o" "CMakeFiles/cg-load.dir/f2_4.c.o" "CMakeFiles/cg-load.dir/f2_5.c.o" "CMakeFiles/cg-load.dir/file.c.o" "CMakeFiles/cg-load.dir/file-version-factory.c.o" "CMakeFiles/cg-load.dir/formats.c.o" "CMakeFiles/cg-load.dir/writer-algn.c.o" "CMakeFiles/cg-load.dir/writer-evidence-dnbs.c.o" "CMakeFiles/cg-load.dir/writer-evidence-intervals.c.o" "CMakeFiles/cg-load.dir/writer-seq.c.o" -o ../../../bin/cg-load  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
[ 69%] Building C object tools/internal/make-read-filter/CMakeFiles/make-read-filter.dir/make-read-filter.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema && /usr/bin/cmake -E cmake_link_script CMakeFiles/idx-text-checklookup.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f cg-load.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/make-read-filter && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -Wno-unused-result -MD -MT tools/internal/make-read-filter/CMakeFiles/make-read-filter.dir/make-read-filter.c.o -MF CMakeFiles/make-read-filter.dir/make-read-filter.c.o.d -o CMakeFiles/make-read-filter.dir/make-read-filter.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/make-read-filter/make-read-filter.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv cg-load cg-load.3.0.9
[ 69%] Linking C executable ../../../bin/ccextract
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/ccextract && /usr/bin/cmake -E cmake_link_script CMakeFiles/ccextract.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s cg-load.3.0.9 cg-load.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s cg-load.3 cg-load
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 69%] Built target cg-load
make  -f tools/internal/md5cp/CMakeFiles/md5cp.dir/build.make tools/internal/md5cp/CMakeFiles/md5cp.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/md5cp /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/md5cp /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/md5cp/CMakeFiles/md5cp.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/meta-cmp /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-cmp /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-cmp/CMakeFiles/meta-cmp.dir/DependInfo.cmake "--color="
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/idx-text-checklookup.dir/link.d "CMakeFiles/idx-text-checklookup.dir/idx-text/checklookup.cpp.o" -o ../../../../../test-bin/idx-text-checklookup  /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/meta-cmp/CMakeFiles/meta-cmp.dir/build.make tools/internal/meta-cmp/CMakeFiles/meta-cmp.dir/build
[ 69%] Built target idx-text-checklookup
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/meta-copy/CMakeFiles/meta-copy.dir/build.make tools/internal/meta-copy/CMakeFiles/meta-copy.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/meta-copy /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-copy /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-copy/CMakeFiles/meta-copy.dir/DependInfo.cmake "--color="
[ 70%] Building C object tools/internal/meta-cmp/CMakeFiles/meta-cmp.dir/meta-cmp.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-cmp && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/meta-cmp\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/meta-cmp/CMakeFiles/meta-cmp.dir/meta-cmp.c.o -MF CMakeFiles/meta-cmp.dir/meta-cmp.c.o.d -o CMakeFiles/meta-cmp.dir/meta-cmp.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/meta-cmp/meta-cmp.c
[ 70%] Building C object tools/internal/md5cp/CMakeFiles/md5cp.dir/md5cp.c.o
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/md5cp && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/md5cp/CMakeFiles/md5cp.dir/md5cp.c.o -MF CMakeFiles/md5cp.dir/md5cp.c.o.d -o CMakeFiles/md5cp.dir/md5cp.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/md5cp/md5cp.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/ccextract.dir/link.d CMakeFiles/ccextract.dir/ccextract.c.o -o ../../../bin/ccextract  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a ../../../ilib/libkxml.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libxml2.so
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f ccextract.3.0.9
[ 70%] Building C object tools/internal/meta-copy/CMakeFiles/meta-copy.dir/meta-copy.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-copy && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/meta-copy\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/meta-copy/CMakeFiles/meta-copy.dir/meta-copy.c.o -MF CMakeFiles/meta-copy.dir/meta-copy.c.o.d -o CMakeFiles/meta-copy.dir/meta-copy.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/meta-copy/meta-copy.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv ccextract ccextract.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s ccextract.3.0.9 ccextract.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s ccextract.3 ccextract
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 70%] Built target ccextract
make  -f tools/internal/meta-repair/CMakeFiles/meta-repair.dir/build.make tools/internal/meta-repair/CMakeFiles/meta-repair.dir/depend
[ 70%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/ccfileformat.c.o
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/meta-repair /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-repair /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-repair/CMakeFiles/meta-repair.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/ccfileformat.c.o -MF CMakeFiles/copycat.dir/ccfileformat.c.o.d -o CMakeFiles/copycat.dir/ccfileformat.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat/ccfileformat.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/meta-repair/CMakeFiles/meta-repair.dir/build.make tools/internal/meta-repair/CMakeFiles/meta-repair.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 70%] Building C object tools/internal/meta-repair/CMakeFiles/meta-repair.dir/meta-repair.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-repair && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/meta-repair\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/meta-repair/CMakeFiles/meta-repair.dir/meta-repair.c.o -MF CMakeFiles/meta-repair.dir/meta-repair.c.o.d -o CMakeFiles/meta-repair.dir/meta-repair.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/meta-repair/meta-repair.c
[ 70%] Linking C executable ../../../bin/meta-cmp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-cmp && /usr/bin/cmake -E cmake_link_script CMakeFiles/meta-cmp.dir/link.txt --verbose=1
[ 70%] Linking C executable ../../../bin/meta-copy
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-copy && /usr/bin/cmake -E cmake_link_script CMakeFiles/meta-copy.dir/link.txt --verbose=1
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/meta-cmp.dir/link.d "CMakeFiles/meta-cmp.dir/meta-cmp.c.o" -o ../../../bin/meta-cmp  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f meta-cmp.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv meta-cmp meta-cmp.3.0.9
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/meta-copy.dir/link.d "CMakeFiles/meta-copy.dir/meta-copy.c.o" -o ../../../bin/meta-copy  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s meta-cmp.3.0.9 meta-cmp.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f meta-copy.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s meta-cmp.3 meta-cmp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv meta-copy meta-copy.3.0.9
[ 70%] Linking C executable ../../../bin/md5cp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/md5cp && /usr/bin/cmake -E cmake_link_script CMakeFiles/md5cp.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s meta-copy.3.0.9 meta-copy.3
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat/ccfileformat.c: In function 'CCFileFormatIsFastq':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat/ccfileformat.c:275:27: warning: 'seq_len' may be used uninitialized [-Wmaybe-uninitialized]
  275 |                         if(quality_values_len != seq_len)
      |                           ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat/ccfileformat.c:193:12: note: 'seq_len' was declared here
  193 |     size_t seq_len,quality_values_len,seq_id_len;
      |            ^~~~~~~
[ 70%] Built target meta-cmp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s meta-copy.3 meta-copy
make  -f tools/internal/rd-filter-redact/CMakeFiles/test-read-write-cursor.dir/build.make tools/internal/rd-filter-redact/CMakeFiles/test-read-write-cursor.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/rd-filter-redact /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/rd-filter-redact /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/rd-filter-redact/CMakeFiles/test-read-write-cursor.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/rd-filter-redact/CMakeFiles/test-read-write-cursor.dir/build.make tools/internal/rd-filter-redact/CMakeFiles/test-read-write-cursor.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 70%] Built target meta-copy
make  -f tools/internal/rd-filter-redact/CMakeFiles/read-filter-redact.dir/build.make tools/internal/rd-filter-redact/CMakeFiles/read-filter-redact.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/rd-filter-redact /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/rd-filter-redact /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/rd-filter-redact/CMakeFiles/read-filter-redact.dir/DependInfo.cmake "--color="
[ 71%] Building C object tools/internal/rd-filter-redact/CMakeFiles/test-read-write-cursor.dir/test-read-write-cursor.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/rd-filter-redact && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/rd-filter-redact\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/rd-filter-redact/CMakeFiles/test-read-write-cursor.dir/test-read-write-cursor.c.o -MF CMakeFiles/test-read-write-cursor.dir/test-read-write-cursor.c.o.d -o CMakeFiles/test-read-write-cursor.dir/test-read-write-cursor.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/rd-filter-redact/test-read-write-cursor.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/md5cp.dir/link.d CMakeFiles/md5cp.dir/md5cp.c.o -o ../../../bin/md5cp  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f md5cp.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv md5cp md5cp.3.0.9
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/rd-filter-redact/CMakeFiles/read-filter-redact.dir/build.make tools/internal/rd-filter-redact/CMakeFiles/read-filter-redact.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s md5cp.3.0.9 md5cp.3
[ 71%] Building C object tools/internal/rd-filter-redact/CMakeFiles/read-filter-redact.dir/read-filter-redact.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/rd-filter-redact && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/rd-filter-redact\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/rd-filter-redact/CMakeFiles/read-filter-redact.dir/read-filter-redact.c.o -MF CMakeFiles/read-filter-redact.dir/read-filter-redact.c.o.d -o CMakeFiles/read-filter-redact.dir/read-filter-redact.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/rd-filter-redact/read-filter-redact.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s md5cp.3 md5cp
[ 72%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/cccat.c.o
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/cccat.c.o -MF CMakeFiles/copycat.dir/cccat.c.o.d -o CMakeFiles/copycat.dir/cccat.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat/cccat.c
[ 72%] Built target md5cp
make  -f tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/build.make tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-copy /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/DependInfo.cmake "--color="
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/rd-filter-redact/read-filter-redact.c: In function 'enter_date_name_vers':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/rd-filter-redact/read-filter-redact.c:755:59: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  755 |                 rc = KMDataNodeWriteAttr ( node, "build", __DATE__ );
      |                                                           ^~~~~~~~
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/build.make tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 72%] Building C object tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/context.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-copy\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/context.c.o -MF CMakeFiles/vdb-copy.dir/context.c.o.d -o CMakeFiles/vdb-copy.dir/context.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-copy/context.c
[ 72%] Linking CXX executable ../../../bin/align-cache
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/align-cache && /usr/bin/cmake -E cmake_link_script CMakeFiles/align-cache.dir/link.txt --verbose=1
[ 72%] Linking C executable ../../../bin/test-read-write-cursor
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/rd-filter-redact && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-read-write-cursor.dir/link.txt --verbose=1
[ 72%] Linking C executable ../../../bin/make-read-filter
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/make-read-filter && /usr/bin/cmake -E cmake_link_script CMakeFiles/make-read-filter.dir/link.txt --verbose=1
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-read-write-cursor.dir/link.d "CMakeFiles/test-read-write-cursor.dir/test-read-write-cursor.c.o" -o ../../../bin/test-read-write-cursor  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f test-read-write-cursor.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv test-read-write-cursor test-read-write-cursor.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s test-read-write-cursor.3.0.9 test-read-write-cursor.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s test-read-write-cursor.3 test-read-write-cursor
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/align-cache.dir/link.d "CMakeFiles/align-cache.dir/align-cache.cpp.o" "CMakeFiles/align-cache.dir/helper.cpp.o" -o ../../../bin/align-cache  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f align-cache.3.0.9
[ 72%] Linking C executable ../../../bin/meta-repair
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/make-read-filter.dir/link.d "CMakeFiles/make-read-filter.dir/make-read-filter.c.o" -o ../../../bin/make-read-filter  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f make-read-filter.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-repair && /usr/bin/cmake -E cmake_link_script CMakeFiles/meta-repair.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv align-cache align-cache.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s align-cache.3.0.9 align-cache.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s align-cache.3 align-cache
[ 72%] Built target test-read-write-cursor
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv make-read-filter make-read-filter.3.0.9
make  -f tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/build.make tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/depend
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s make-read-filter.3.0.9 make-read-filter.3
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-diff /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-diff /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/DependInfo.cmake "--color="
[ 72%] Built target align-cache
make  -f tools/internal/check-redact/CMakeFiles/check-redact.dir/build.make tools/internal/check-redact/CMakeFiles/check-redact.dir/depend
[ 72%] Building C object tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/helper.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s make-read-filter.3 make-read-filter
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/check-redact /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/check-redact /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/check-redact/CMakeFiles/check-redact.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-copy\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/helper.c.o -MF CMakeFiles/vdb-copy.dir/helper.c.o.d -o CMakeFiles/vdb-copy.dir/helper.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-copy/helper.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/build.make tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/check-redact/CMakeFiles/check-redact.dir/build.make tools/internal/check-redact/CMakeFiles/check-redact.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 72%] Built target make-read-filter
[ 72%] Building C object tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/namelist_tools.c.o
make  -f tools/test-tools/crc32sum/CMakeFiles/crc32sum.dir/build.make tools/test-tools/crc32sum/CMakeFiles/crc32sum.dir/depend
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-diff && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/vdb-diff\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/namelist_tools.c.o -MF CMakeFiles/vdb-diff.dir/namelist_tools.c.o.d -o CMakeFiles/vdb-diff.dir/namelist_tools.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-diff/namelist_tools.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/meta-repair.dir/link.d "CMakeFiles/meta-repair.dir/meta-repair.c.o" -o ../../../bin/meta-repair  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f meta-repair.3.0.9
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/crc32sum /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/crc32sum /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/crc32sum/CMakeFiles/crc32sum.dir/DependInfo.cmake "--color="
[ 72%] Building C object tools/internal/check-redact/CMakeFiles/check-redact.dir/check-redact.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv meta-repair meta-repair.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s meta-repair.3.0.9 meta-repair.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/check-redact && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/check-redact\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/check-redact/CMakeFiles/check-redact.dir/check-redact.c.o -MF CMakeFiles/check-redact.dir/check-redact.c.o.d -o CMakeFiles/check-redact.dir/check-redact.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/check-redact/check-redact.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s meta-repair.3 meta-repair
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 72%] Built target meta-repair
make  -f tools/test-tools/test-download/CMakeFiles/test-download.dir/build.make tools/test-tools/test-download/CMakeFiles/test-download.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/test-download /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/test-download /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/test-download/CMakeFiles/test-download.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/crc32sum/CMakeFiles/crc32sum.dir/build.make tools/test-tools/crc32sum/CMakeFiles/crc32sum.dir/build
[ 72%] Linking C executable ../../../bin/read-filter-redact
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/rd-filter-redact && /usr/bin/cmake -E cmake_link_script CMakeFiles/read-filter-redact.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/test-download/CMakeFiles/test-download.dir/build.make tools/test-tools/test-download/CMakeFiles/test-download.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 72%] Building C object tools/test-tools/crc32sum/CMakeFiles/crc32sum.dir/crc32sum.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/crc32sum && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/crc32sum/CMakeFiles/crc32sum.dir/crc32sum.c.o -MF CMakeFiles/crc32sum.dir/crc32sum.c.o.d -o CMakeFiles/crc32sum.dir/crc32sum.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/crc32sum/crc32sum.c
[ 72%] Building C object tools/test-tools/test-download/CMakeFiles/test-download.dir/test-download.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/test-download && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/test-download/CMakeFiles/test-download.dir/test-download.c.o -MF CMakeFiles/test-download.dir/test-download.c.o.d -o CMakeFiles/test-download.dir/test-download.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/test-download/test-download.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/read-filter-redact.dir/link.d "CMakeFiles/read-filter-redact.dir/read-filter-redact.c.o" -o ../../../bin/read-filter-redact  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f read-filter-redact.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv read-filter-redact read-filter-redact.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s read-filter-redact.3.0.9 read-filter-redact.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s read-filter-redact.3 read-filter-redact
[ 72%] Linking C executable ../../../bin/check-redact
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/check-redact && /usr/bin/cmake -E cmake_link_script CMakeFiles/check-redact.dir/link.txt --verbose=1
[ 72%] Building C object tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/coldefs.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-diff && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/vdb-diff\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/coldefs.c.o -MF CMakeFiles/vdb-diff.dir/coldefs.c.o.d -o CMakeFiles/vdb-diff.dir/coldefs.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-diff/coldefs.c
[ 72%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/tool-args.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/tool-args.cpp.o -MF CMakeFiles/sratools.dir/tool-args.cpp.o.d -o CMakeFiles/sratools.dir/tool-args.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/tool-args.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 72%] Built target read-filter-redact
make  -f tools/test-tools/kdb-index/CMakeFiles/kdb-index.dir/build.make tools/test-tools/kdb-index/CMakeFiles/kdb-index.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/kdb-index /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/kdb-index /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/kdb-index/CMakeFiles/kdb-index.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/kdb-index/CMakeFiles/kdb-index.dir/build.make tools/test-tools/kdb-index/CMakeFiles/kdb-index.dir/build
[ 72%] Building C object tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/coldefs.c.o
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-copy\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/coldefs.c.o -MF CMakeFiles/vdb-copy.dir/coldefs.c.o.d -o CMakeFiles/vdb-copy.dir/coldefs.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-copy/coldefs.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/check-redact.dir/link.d "CMakeFiles/check-redact.dir/check-redact.c.o" -o ../../../bin/check-redact  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f check-redact.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv check-redact check-redact.3.0.9
[ 72%] Building C object tools/test-tools/kdb-index/CMakeFiles/kdb-index.dir/kdb-index.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/kdb-index && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/kdb-index/CMakeFiles/kdb-index.dir/kdb-index.c.o -MF CMakeFiles/kdb-index.dir/kdb-index.c.o.d -o CMakeFiles/kdb-index.dir/kdb-index.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/kdb-index/kdb-index.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s check-redact.3.0.9 check-redact.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s check-redact.3 check-redact
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 72%] Linking C executable ../../../bin/crc32sum
[ 73%] Building C object tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/vdb-diff-context.c.o
[ 73%] Built target check-redact
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-diff && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/vdb-diff\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/vdb-diff-context.c.o -MF CMakeFiles/vdb-diff.dir/vdb-diff-context.c.o.d -o CMakeFiles/vdb-diff.dir/vdb-diff-context.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-diff/vdb-diff-context.c
make  -f tools/test-tools/pacbio-correct/CMakeFiles/pacbio-correct.dir/build.make tools/test-tools/pacbio-correct/CMakeFiles/pacbio-correct.dir/depend
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/crc32sum && /usr/bin/cmake -E cmake_link_script CMakeFiles/crc32sum.dir/link.txt --verbose=1
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/pacbio-correct /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pacbio-correct /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pacbio-correct/CMakeFiles/pacbio-correct.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 73%] Building C object tools/test-tools/pacbio-correct/CMakeFiles/pacbio-correct.dir/pacbio-correct.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pacbio-correct && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/pacbio-correct/CMakeFiles/pacbio-correct.dir/pacbio-correct.c.o -MF CMakeFiles/pacbio-correct.dir/pacbio-correct.c.o.d -o CMakeFiles/pacbio-correct.dir/pacbio-correct.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/pacbio-correct/pacbio-correct.c
[ 73%] Linking C executable ../../../bin/kdb-index
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/kdb-index && /usr/bin/cmake -E cmake_link_script CMakeFiles/kdb-index.dir/link.txt --verbose=1
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-download.dir/link.d "CMakeFiles/test-download.dir/test-download.c.o" -o ../../../bin/test-download  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
[ 73%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/cctree.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f test-download.3.0.9
[ 73%] Building C object tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/cmn.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-diff && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/vdb-diff\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/cmn.c.o -MF CMakeFiles/vdb-diff.dir/cmn.c.o.d -o CMakeFiles/vdb-diff.dir/cmn.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-diff/cmn.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/cctree.c.o -MF CMakeFiles/copycat.dir/cctree.c.o.d -o CMakeFiles/copycat.dir/cctree.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat/cctree.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/crc32sum.dir/link.d CMakeFiles/crc32sum.dir/crc32sum.c.o -o ../../../bin/crc32sum  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f crc32sum.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv test-download test-download.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv crc32sum crc32sum.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s test-download.3.0.9 test-download.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s crc32sum.3.0.9 crc32sum.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s test-download.3 test-download
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s crc32sum.3 crc32sum
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/kdb-index.dir/link.d "CMakeFiles/kdb-index.dir/kdb-index.c.o" -o ../../../bin/kdb-index  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f kdb-index.3.0.9
[ 73%] Linking C executable ../../../bin/pacbio-correct
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pacbio-correct && /usr/bin/cmake -E cmake_link_script CMakeFiles/pacbio-correct.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv kdb-index kdb-index.3.0.9
[ 73%] Built target crc32sum
make  -f tools/test-tools/schema-replace/CMakeFiles/schema-replace.dir/build.make tools/test-tools/schema-replace/CMakeFiles/schema-replace.dir/depend
[ 73%] Built target test-download
make  -f tools/test-tools/sortreadtest/CMakeFiles/sortreadtest.dir/build.make tools/test-tools/sortreadtest/CMakeFiles/sortreadtest.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/schema-replace /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/schema-replace /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/schema-replace/CMakeFiles/schema-replace.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s kdb-index.3.0.9 kdb-index.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s kdb-index.3 kdb-index
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/sortreadtest /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sortreadtest /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sortreadtest/CMakeFiles/sortreadtest.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 73%] Built target kdb-index
make  -f tools/test-tools/rowwritetest/CMakeFiles/rowwritetest.dir/build.make tools/test-tools/rowwritetest/CMakeFiles/rowwritetest.dir/depend
[ 73%] Building C object tools/test-tools/schema-replace/CMakeFiles/schema-replace.dir/schema-replace.c.o
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/rowwritetest /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/rowwritetest /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/rowwritetest/CMakeFiles/rowwritetest.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/schema-replace && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/schema-replace/CMakeFiles/schema-replace.dir/schema-replace.c.o -MF CMakeFiles/schema-replace.dir/schema-replace.c.o.d -o CMakeFiles/schema-replace.dir/schema-replace.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/schema-replace/schema-replace.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/pacbio-correct.dir/link.d "CMakeFiles/pacbio-correct.dir/pacbio-correct.c.o" -o ../../../bin/pacbio-correct  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
[ 73%] Building C object tools/test-tools/sortreadtest/CMakeFiles/sortreadtest.dir/sortreadtest.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f pacbio-correct.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sortreadtest && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/sortreadtest/CMakeFiles/sortreadtest.dir/sortreadtest.c.o -MF CMakeFiles/sortreadtest.dir/sortreadtest.c.o.d -o CMakeFiles/sortreadtest.dir/sortreadtest.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/sortreadtest/sortreadtest.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv pacbio-correct pacbio-correct.3.0.9
[ 73%] Building C object tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/get_platform.c.o
[ 73%] Building C object tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/row_by_row.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s pacbio-correct.3.0.9 pacbio-correct.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-copy\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/get_platform.c.o -MF CMakeFiles/vdb-copy.dir/get_platform.c.o.d -o CMakeFiles/vdb-copy.dir/get_platform.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-copy/get_platform.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-diff && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/vdb-diff\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/row_by_row.c.o -MF CMakeFiles/vdb-diff.dir/row_by_row.c.o.d -o CMakeFiles/vdb-diff.dir/row_by_row.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-diff/row_by_row.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s pacbio-correct.3 pacbio-correct
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/rowwritetest/CMakeFiles/rowwritetest.dir/build.make tools/test-tools/rowwritetest/CMakeFiles/rowwritetest.dir/build
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 73%] Building C object tools/test-tools/rowwritetest/CMakeFiles/rowwritetest.dir/rowwritetest.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/rowwritetest && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/rowwritetest/CMakeFiles/rowwritetest.dir/rowwritetest.c.o -MF CMakeFiles/rowwritetest.dir/rowwritetest.c.o.d -o CMakeFiles/rowwritetest.dir/rowwritetest.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/rowwritetest/rowwritetest.c
[ 73%] Built target pacbio-correct
[ 73%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/cctree-dump.c.o
make  -f tools/test-tools/samview-util/CMakeFiles/samview-util.dir/build.make tools/test-tools/samview-util/CMakeFiles/samview-util.dir/depend
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/cctree-dump.c.o -MF CMakeFiles/copycat.dir/cctree-dump.c.o.d -o CMakeFiles/copycat.dir/cctree-dump.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat/cctree-dump.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/samview-util /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/samview-util /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/samview-util/CMakeFiles/samview-util.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/samview-util/CMakeFiles/samview-util.dir/build.make tools/test-tools/samview-util/CMakeFiles/samview-util.dir/build
[ 73%] Building C object tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/col_by_col.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-diff && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/vdb-diff\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/col_by_col.c.o -MF CMakeFiles/vdb-diff.dir/col_by_col.c.o.d -o CMakeFiles/vdb-diff.dir/col_by_col.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-diff/col_by_col.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 74%] Building C object tools/test-tools/samview-util/CMakeFiles/samview-util.dir/samview.c.o
[ 74%] Building C object tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/copy_meta.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-copy\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/copy_meta.c.o -MF CMakeFiles/vdb-copy.dir/copy_meta.c.o.d -o CMakeFiles/vdb-copy.dir/copy_meta.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-copy/copy_meta.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/samview-util && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/samview-util/CMakeFiles/samview-util.dir/samview.c.o -MF CMakeFiles/samview-util.dir/samview.c.o.d -o CMakeFiles/samview-util.dir/samview.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/samview-util/samview.c
[ 74%] Linking C executable ../../../bin/sortreadtest
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sortreadtest && /usr/bin/cmake -E cmake_link_script CMakeFiles/sortreadtest.dir/link.txt --verbose=1
[ 74%] Linking C executable ../../../bin/schema-replace
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/schema-replace && /usr/bin/cmake -E cmake_link_script CMakeFiles/schema-replace.dir/link.txt --verbose=1
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-copy/copy_meta.c: In function 'enter_date_name_vers':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-copy/copy_meta.c:301:59: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  301 |                 rc = KMDataNodeWriteAttr ( node, "build", __DATE__ );
      |                                                           ^~~~~~~~
[ 74%] Building C object tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/vdb-diff.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-diff && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/vdb-diff\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/vdb-diff.c.o -MF CMakeFiles/vdb-diff.dir/vdb-diff.c.o.d -o CMakeFiles/vdb-diff.dir/vdb-diff.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-diff/vdb-diff.c
[ 74%] Linking C executable ../../../bin/samview-util
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/samview-util && /usr/bin/cmake -E cmake_link_script CMakeFiles/samview-util.dir/link.txt --verbose=1
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sortreadtest.dir/link.d CMakeFiles/sortreadtest.dir/sortreadtest.c.o -o ../../../bin/sortreadtest  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f sortreadtest.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv sortreadtest sortreadtest.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sortreadtest.3.0.9 sortreadtest.3
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/schema-replace.dir/link.d "CMakeFiles/schema-replace.dir/schema-replace.c.o" -o ../../../bin/schema-replace  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f schema-replace.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sortreadtest.3 sortreadtest
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv schema-replace schema-replace.3.0.9
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s schema-replace.3.0.9 schema-replace.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s schema-replace.3 schema-replace
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/samview-util.dir/link.d "CMakeFiles/samview-util.dir/samview.c.o" -o ../../../bin/samview-util  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f samview-util.3.0.9
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv samview-util samview-util.3.0.9
[ 74%] Built target sortreadtest
make  -f tools/test-tools/testld/CMakeFiles/testld.dir/build.make tools/test-tools/testld/CMakeFiles/testld.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/testld /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/testld /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/testld/CMakeFiles/testld.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s samview-util.3.0.9 samview-util.3
[ 74%] Built target schema-replace
make  -f tools/test-tools/txt2kdb/CMakeFiles/txt2kdb.dir/build.make tools/test-tools/txt2kdb/CMakeFiles/txt2kdb.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/txt2kdb /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/txt2kdb /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/txt2kdb/CMakeFiles/txt2kdb.dir/DependInfo.cmake "--color="
[ 75%] Linking C executable ../../../bin/rowwritetest
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s samview-util.3 samview-util
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/rowwritetest && /usr/bin/cmake -E cmake_link_script CMakeFiles/rowwritetest.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/testld/CMakeFiles/testld.dir/build.make tools/test-tools/testld/CMakeFiles/testld.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 75%] Linking C executable ../../../bin/vdb-diff
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/txt2kdb/CMakeFiles/txt2kdb.dir/build.make tools/test-tools/txt2kdb/CMakeFiles/txt2kdb.dir/build
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-diff && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-diff.dir/link.txt --verbose=1
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 75%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/cctar.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/cctar.c.o -MF CMakeFiles/copycat.dir/cctar.c.o.d -o CMakeFiles/copycat.dir/cctar.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat/cctar.c
[ 75%] Building C object tools/test-tools/testld/CMakeFiles/testld.dir/testld.c.o
[ 75%] Building C object tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/type_matcher.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/testld && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/testld/CMakeFiles/testld.dir/testld.c.o -MF CMakeFiles/testld.dir/testld.c.o.d -o CMakeFiles/testld.dir/testld.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/testld/testld.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-copy\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/type_matcher.c.o -MF CMakeFiles/vdb-copy.dir/type_matcher.c.o.d -o CMakeFiles/vdb-copy.dir/type_matcher.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-copy/type_matcher.c
[ 76%] Building C object tools/test-tools/txt2kdb/CMakeFiles/txt2kdb.dir/txt2kdb.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/txt2kdb && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/txt2kdb/CMakeFiles/txt2kdb.dir/txt2kdb.c.o -MF CMakeFiles/txt2kdb.dir/txt2kdb.c.o.d -o CMakeFiles/txt2kdb.dir/txt2kdb.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/txt2kdb/txt2kdb.c
[ 76%] Built target samview-util
make  -f tools/test-tools/sam-factory/CMakeFiles/sam-factory.dir/build.make tools/test-tools/sam-factory/CMakeFiles/sam-factory.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/sam-factory /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sam-factory /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sam-factory/CMakeFiles/sam-factory.dir/DependInfo.cmake "--color="
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/rowwritetest.dir/link.d CMakeFiles/rowwritetest.dir/rowwritetest.c.o -o ../../../bin/rowwritetest  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/sam-factory/CMakeFiles/sam-factory.dir/build.make tools/test-tools/sam-factory/CMakeFiles/sam-factory.dir/build
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f rowwritetest.3.0.9
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-diff.dir/link.d "CMakeFiles/vdb-diff.dir/namelist_tools.c.o" "CMakeFiles/vdb-diff.dir/coldefs.c.o" "CMakeFiles/vdb-diff.dir/vdb-diff-context.c.o" "CMakeFiles/vdb-diff.dir/cmn.c.o" "CMakeFiles/vdb-diff.dir/row_by_row.c.o" "CMakeFiles/vdb-diff.dir/col_by_col.c.o" "CMakeFiles/vdb-diff.dir/vdb-diff.c.o" -o ../../../bin/vdb-diff  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f vdb-diff.3.0.9
[ 76%] Building CXX object tools/test-tools/sam-factory/CMakeFiles/sam-factory.dir/sam-factory.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sam-factory && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/test-tools/sam-factory/CMakeFiles/sam-factory.dir/sam-factory.cpp.o -MF CMakeFiles/sam-factory.dir/sam-factory.cpp.o.d -o CMakeFiles/sam-factory.dir/sam-factory.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/sam-factory/sam-factory.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv rowwritetest rowwritetest.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv vdb-diff vdb-diff.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s rowwritetest.3.0.9 rowwritetest.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-diff.3.0.9 vdb-diff.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s rowwritetest.3 rowwritetest
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-diff.3 vdb-diff
[ 76%] Linking C executable ../../../bin/testld
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/testld && /usr/bin/cmake -E cmake_link_script CMakeFiles/testld.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 76%] Built target rowwritetest
make  -f tools/test-tools/sam-analyze/CMakeFiles/sam-analyze.dir/build.make tools/test-tools/sam-analyze/CMakeFiles/sam-analyze.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/sam-analyze /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sam-analyze /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sam-analyze/CMakeFiles/sam-analyze.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 76%] Built target vdb-diff
make  -f tools/test-tools/sam-analyze/CMakeFiles/sam-analyze.dir/build.make tools/test-tools/sam-analyze/CMakeFiles/sam-analyze.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/qa-stats/CMakeFiles/qa-stats.dir/build.make tools/test-tools/qa-stats/CMakeFiles/qa-stats.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/qa-stats /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/qa-stats /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/qa-stats/CMakeFiles/qa-stats.dir/DependInfo.cmake "--color="
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testld.dir/link.d CMakeFiles/testld.dir/testld.c.o -o ../../../bin/testld  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
[ 76%] Building CXX object tools/test-tools/sam-analyze/CMakeFiles/sam-analyze.dir/main.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f testld.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sam-analyze && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/test-tools/sam-analyze/CMakeFiles/sam-analyze.dir/main.cpp.o -MF CMakeFiles/sam-analyze.dir/main.cpp.o.d -o CMakeFiles/sam-analyze.dir/main.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/sam-analyze/main.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv testld testld.3.0.9
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/qa-stats/CMakeFiles/qa-stats.dir/build.make tools/test-tools/qa-stats/CMakeFiles/qa-stats.dir/build
[ 76%] Linking C executable ../../../bin/txt2kdb
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/txt2kdb && /usr/bin/cmake -E cmake_link_script CMakeFiles/txt2kdb.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s testld.3.0.9 testld.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s testld.3 testld
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 76%] Building CXX object tools/test-tools/qa-stats/CMakeFiles/qa-stats.dir/main.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/qa-stats && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/test-tools/qa-stats/CMakeFiles/qa-stats.dir/main.cpp.o -MF CMakeFiles/qa-stats.dir/main.cpp.o.d -o CMakeFiles/qa-stats.dir/main.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/qa-stats/main.cpp
[ 76%] Built target testld
[ 77%] Building C object tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/redactval.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-copy\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/redactval.c.o -MF CMakeFiles/vdb-copy.dir/redactval.c.o.d -o CMakeFiles/vdb-copy.dir/redactval.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-copy/redactval.c
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/txt2kdb.dir/link.d CMakeFiles/txt2kdb.dir/txt2kdb.c.o -o ../../../bin/txt2kdb  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f txt2kdb.3.0.9
[ 78%] Building CXX object tools/loaders/bam-loader/CMakeFiles/bam-load.dir/mem-bank.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv txt2kdb txt2kdb.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/bam-load.dir/mem-bank.cpp.o -MF CMakeFiles/bam-load.dir/mem-bank.cpp.o.d -o CMakeFiles/bam-load.dir/mem-bank.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/mem-bank.cpp
[ 78%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/ccsra.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s txt2kdb.3.0.9 txt2kdb.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/ccsra.c.o -MF CMakeFiles/copycat.dir/ccsra.c.o.d -o CMakeFiles/copycat.dir/ccsra.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat/ccsra.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s txt2kdb.3 txt2kdb
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 78%] Built target txt2kdb
make  -f test/vdb/CMakeFiles/test-vdb.dir/build.make test/vdb/CMakeFiles/test-vdb.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/vdb /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/vdb /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/vdb/CMakeFiles/test-vdb.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/vdb/CMakeFiles/test-vdb.dir/build.make test/vdb/CMakeFiles/test-vdb.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 78%] Building C object tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/config_values.c.o
[ 78%] Building CXX object test/vdb/CMakeFiles/test-vdb.dir/test-vdb.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/vdb && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/vdb/CMakeFiles/test-vdb.dir/test-vdb.cpp.o -MF CMakeFiles/test-vdb.dir/test-vdb.cpp.o.d -o CMakeFiles/test-vdb.dir/test-vdb.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/vdb/test-vdb.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-copy\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/config_values.c.o -MF CMakeFiles/vdb-copy.dir/config_values.c.o.d -o CMakeFiles/vdb-copy.dir/config_values.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-copy/config_values.c
[ 78%] Building C object tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/vdb-copy.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-copy\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/vdb-copy.c.o -MF CMakeFiles/vdb-copy.dir/vdb-copy.c.o.d -o CMakeFiles/vdb-copy.dir/vdb-copy.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-copy/vdb-copy.c
[ 78%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/ccsubchunk.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/ccsubchunk.c.o -MF CMakeFiles/copycat.dir/ccsubchunk.c.o.d -o CMakeFiles/copycat.dir/ccsubchunk.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat/ccsubchunk.c
[ 78%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/ccfile.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/ccfile.c.o -MF CMakeFiles/copycat.dir/ccfile.c.o.d -o CMakeFiles/copycat.dir/ccfile.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat/ccfile.c
[ 78%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/kff/fileformat.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/kff/fileformat.c.o -MF CMakeFiles/copycat.dir/kff/fileformat.c.o.d -o CMakeFiles/copycat.dir/kff/fileformat.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat/kff/fileformat.c
[ 78%] Linking C executable ../../../bin/vdb-copy
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-copy.dir/link.txt --verbose=1
[ 78%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/kff/ffext.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/kff/ffext.c.o -MF CMakeFiles/copycat.dir/kff/ffext.c.o.d -o CMakeFiles/copycat.dir/kff/ffext.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat/kff/ffext.c
[ 78%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/build-version.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/build-version.cpp.o -MF CMakeFiles/sratools.dir/build-version.cpp.o.d -o CMakeFiles/sratools.dir/build-version.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/build-version.cpp
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-copy.dir/link.d "CMakeFiles/vdb-copy.dir/context.c.o" "CMakeFiles/vdb-copy.dir/helper.c.o" "CMakeFiles/vdb-copy.dir/coldefs.c.o" "CMakeFiles/vdb-copy.dir/get_platform.c.o" "CMakeFiles/vdb-copy.dir/copy_meta.c.o" "CMakeFiles/vdb-copy.dir/type_matcher.c.o" "CMakeFiles/vdb-copy.dir/redactval.c.o" "CMakeFiles/vdb-copy.dir/config_values.c.o" "CMakeFiles/vdb-copy.dir/vdb-copy.c.o" -o ../../../bin/vdb-copy  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f vdb-copy.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv vdb-copy vdb-copy.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-copy.3.0.9 vdb-copy.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-copy.3 vdb-copy
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cmake -E copy /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-copy/vdb-copy.kfg /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/ncbi/vdb-copy.kfg
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 78%] Built target vdb-copy
make  -f test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir/build.make test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/ngs/ngs-java /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/ngs/ngs-java /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir/DependInfo.cmake "--color="
[ 79%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/kff/ffkey.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/kff/ffkey.c.o -MF CMakeFiles/copycat.dir/kff/ffkey.c.o.d -o CMakeFiles/copycat.dir/kff/ffkey.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat/kff/ffkey.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir/build.make test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 79%] Building Java objects for test-ngs-java.jar
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/ngs/ngs-java && /usr/bin/cmake -DCMAKE_JAVA_CLASS_OUTPUT_PATH=/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir -DCMAKE_JAR_CLASSES_PREFIX= -P /usr/share/cmake-3.31/Modules/UseJava/ClearClassFiles.cmake --log-level STATUS
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/ngs/ngs-java && /usr/bin/javac -classpath :/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib/ngs-java.jar:/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/ngs/ngs-java/junit-4.11.jar:/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/ngs/ngs-java:/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib:/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib/ngs-java.jar:/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/ngs/ngs-java/junit-4.11.jar -d /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir @/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir/java_sources
[ 79%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/kff/ffmagic.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/kff/ffmagic.c.o -MF CMakeFiles/copycat.dir/kff/ffmagic.c.o.d -o CMakeFiles/copycat.dir/kff/ffmagic.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat/kff/ffmagic.c
[ 79%] Linking C executable ../../../bin/copycat
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cmake -E cmake_link_script CMakeFiles/copycat.dir/link.txt --verbose=1
make  -f test/external/align-info/CMakeFiles/Build-align-info.dir/build.make test/external/align-info/CMakeFiles/Build-align-info.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/align-info /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/align-info /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/align-info/CMakeFiles/Build-align-info.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/align-info/CMakeFiles/Build-align-info.dir/build.make test/external/align-info/CMakeFiles/Build-align-info.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/align-info/CMakeFiles/Build-align-info.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 79%] Built target Build-align-info
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_BuildVersion.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_BuildVersion.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool/CMakeFiles/Test_Drivertool_BuildVersion.dir/DependInfo.cmake "--color="
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/copycat.dir/link.d CMakeFiles/copycat.dir/copycat.c.o CMakeFiles/copycat.dir/ccfileformat.c.o CMakeFiles/copycat.dir/cccat.c.o CMakeFiles/copycat.dir/cctree.c.o "CMakeFiles/copycat.dir/cctree-dump.c.o" CMakeFiles/copycat.dir/cctar.c.o CMakeFiles/copycat.dir/ccsra.c.o CMakeFiles/copycat.dir/ccsubchunk.c.o CMakeFiles/copycat.dir/ccfile.c.o CMakeFiles/copycat.dir/kff/fileformat.c.o CMakeFiles/copycat.dir/kff/ffext.c.o CMakeFiles/copycat.dir/kff/ffkey.c.o CMakeFiles/copycat.dir/kff/ffmagic.c.o -o ../../../bin/copycat  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libmagic.so
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f copycat.3.0.9
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_BuildVersion.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_BuildVersion.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv copycat copycat.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s copycat.3.0.9 copycat.3
[ 79%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_BuildVersion.dir/test-build-version.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_BuildVersion.dir/test-build-version.cpp.o -MF CMakeFiles/Test_Drivertool_BuildVersion.dir/test-build-version.cpp.o.d -o CMakeFiles/Test_Drivertool_BuildVersion.dir/test-build-version.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/test-build-version.cpp
[ 79%] Building CXX object tools/loaders/bam-loader/CMakeFiles/bam-load.dir/low-match-count.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/bam-load.dir/low-match-count.cpp.o -MF CMakeFiles/bam-load.dir/low-match-count.cpp.o.d -o CMakeFiles/bam-load.dir/low-match-count.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/bam-loader/low-match-count.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s copycat.3 copycat
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 79%] Built target copycat
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_FilePath.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_FilePath.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool/CMakeFiles/Test_Drivertool_FilePath.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_FilePath.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_FilePath.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 79%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_FilePath.dir/test-filepath.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_FilePath.dir/test-filepath.cpp.o -MF CMakeFiles/Test_Drivertool_FilePath.dir/test-filepath.cpp.o.d -o CMakeFiles/Test_Drivertool_FilePath.dir/test-filepath.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/test-filepath.cpp
[ 80%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/file-path.posix.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/file-path.posix.cpp.o -MF CMakeFiles/sratools.dir/file-path.posix.cpp.o.d -o CMakeFiles/sratools.dir/file-path.posix.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/file-path.posix.cpp
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/vdb-sqlite/sqlite3.c: In function 'sqlite3SelectNew':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/vdb-sqlite/sqlite3.c:115649:10: warning: function may return address of local variable [-Wreturn-local-addr]
115649 |   return pNew;
       |          ^~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/vdb-sqlite/sqlite3.c:115609:10: note: declared here
115609 |   Select standin;
       |          ^~~~~~~
[ 80%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/proc.posix.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/proc.posix.cpp.o -MF CMakeFiles/sratools.dir/proc.posix.cpp.o.d -o CMakeFiles/sratools.dir/proc.posix.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/proc.posix.cpp
Note: ngs_test_lib_load.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/ngs/ngs-java && /usr/bin/cmake -E touch /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir/java_compiled_test-ngs-java
[ 80%] Generating CMakeFiles/test-ngs-java.dir/java_class_filelist
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/ngs/ngs-java && /usr/bin/cmake -DCMAKE_JAVA_CLASS_OUTPUT_PATH=/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir -DCMAKE_JAR_CLASSES_PREFIX= -P /usr/share/cmake-3.31/Modules/UseJava/ClassFilelist.cmake
[ 80%] Linking CXX executable ../../../test-bin/Test_Drivertool_BuildVersion
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Drivertool_BuildVersion.dir/link.txt --verbose=1
[ 81%] Creating Java archive test-ngs-java.jar
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir && /usr/bin/jar -cf /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib/test-ngs-java.jar @java_class_filelist
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Drivertool_BuildVersion.dir/link.d "CMakeFiles/Test_Drivertool_BuildVersion.dir/test-build-version.cpp.o" -o ../../../test-bin/Test_Drivertool_BuildVersion
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 81%] Built target Test_Drivertool_BuildVersion
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_CommandLine.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_CommandLine.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool/CMakeFiles/Test_Drivertool_CommandLine.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_CommandLine.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_CommandLine.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 82%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_CommandLine.dir/test-command-line.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_CommandLine.dir/test-command-line.cpp.o -MF CMakeFiles/Test_Drivertool_CommandLine.dir/test-command-line.cpp.o.d -o CMakeFiles/Test_Drivertool_CommandLine.dir/test-command-line.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/test-command-line.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir && /usr/bin/cmake -D_JAVA_TARGET_DIR=/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib -D_JAVA_TARGET_OUTPUT_NAME=test-ngs-java.jar -D_JAVA_TARGET_OUTPUT_LINK= -P /usr/share/cmake-3.31/Modules/UseJava/Symlinks.cmake
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 82%] Built target test-ngs-java
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_JsonParsing.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_JsonParsing.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool/CMakeFiles/Test_Drivertool_JsonParsing.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_JsonParsing.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_JsonParsing.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 82%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_JsonParsing.dir/test-json-parse.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_JsonParsing.dir/test-json-parse.cpp.o -MF CMakeFiles/Test_Drivertool_JsonParsing.dir/test-json-parse.cpp.o.d -o CMakeFiles/Test_Drivertool_JsonParsing.dir/test-json-parse.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/test-json-parse.cpp
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_SDLResponse.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_SDLResponse.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool/CMakeFiles/Test_Drivertool_SDLResponse.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_SDLResponse.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_SDLResponse.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 82%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_SDLResponse.dir/test-sdl-response.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_SDLResponse.dir/test-sdl-response.cpp.o -MF CMakeFiles/Test_Drivertool_SDLResponse.dir/test-sdl-response.cpp.o.d -o CMakeFiles/Test_Drivertool_SDLResponse.dir/test-sdl-response.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/test-sdl-response.cpp
[ 82%] Linking CXX executable ../../../bin/sratools
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/cmake -E cmake_link_script CMakeFiles/sratools.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sratools.dir/link.d CMakeFiles/sratools.dir/sratools.cpp.o CMakeFiles/sratools.dir/config.cpp.o "CMakeFiles/sratools.dir/command-line.cpp.o" "CMakeFiles/sratools.dir/run-source.cpp.o" CMakeFiles/sratools.dir/proc.cpp.o CMakeFiles/sratools.dir/uuid.cpp.o CMakeFiles/sratools.dir/accession.cpp.o CMakeFiles/sratools.dir/service.cpp.o "CMakeFiles/sratools.dir/json-parse.cpp.o" "CMakeFiles/sratools.dir/SDL-response.cpp.o" "CMakeFiles/sratools.dir/tool-args.cpp.o" "CMakeFiles/sratools.dir/build-version.cpp.o" "CMakeFiles/sratools.dir/file-path.posix.cpp.o" CMakeFiles/sratools.dir/proc.posix.cpp.o -o ../../../bin/sratools  /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f sratools.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv sratools sratools.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sratools.3.0.9 sratools.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sratools.3 sratools
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 82%] Built target sratools
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_Accession.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_Accession.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool/CMakeFiles/Test_Drivertool_Accession.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_Accession.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_Accession.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 82%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_Accession.dir/test-accession.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_Accession.dir/test-accession.cpp.o -MF CMakeFiles/Test_Drivertool_Accession.dir/test-accession.cpp.o.d -o CMakeFiles/Test_Drivertool_Accession.dir/test-accession.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/test-accession.cpp
In file included from /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool/accession.cpp:36,
                 from /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/test-accession.cpp:39:
/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool/accession.hpp: In static member function 'static const char* sratools::Accession::qualityTypeFor(const char*)':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool/accession.hpp:82:56: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                                                        ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool/accession.hpp:82:38: note: the temporary was destroyed at the end of the full expression 'make_sequence<const char**>((& sratools::Accession::extensions[1]), 3)'
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                         ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 82%] Linking CXX executable ../../../test-bin/Test_Drivertool_Accession
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Drivertool_Accession.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Drivertool_Accession.dir/link.d "CMakeFiles/Test_Drivertool_Accession.dir/test-accession.cpp.o" -o ../../../test-bin/Test_Drivertool_Accession
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 82%] Built target Test_Drivertool_Accession
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_UUID.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_UUID.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool/CMakeFiles/Test_Drivertool_UUID.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_UUID.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_UUID.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 82%] Linking CXX executable ../../../test-bin/Test_Drivertool_CommandLine
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Drivertool_CommandLine.dir/link.txt --verbose=1
[ 82%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_UUID.dir/test-uuid.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_UUID.dir/test-uuid.cpp.o -MF CMakeFiles/Test_Drivertool_UUID.dir/test-uuid.cpp.o.d -o CMakeFiles/Test_Drivertool_UUID.dir/test-uuid.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/test-uuid.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Drivertool_CommandLine.dir/link.d "CMakeFiles/Test_Drivertool_CommandLine.dir/test-command-line.cpp.o" -o ../../../test-bin/Test_Drivertool_CommandLine
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 82%] Built target Test_Drivertool_CommandLine
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 82%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/test-run-source.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/test-run-source.cpp.o -MF CMakeFiles/Test_Drivertool_RunSource.dir/test-run-source.cpp.o.d -o CMakeFiles/Test_Drivertool_RunSource.dir/test-run-source.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/test-run-source.cpp
In file included from /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool/sratools.hpp:31,
                 from /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool/run-source.hpp:39,
                 from /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/test-run-source.cpp:38:
/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool/accession.hpp: In static member function 'static const char* sratools::Accession::qualityTypeFor(const char*)':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool/accession.hpp:82:56: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                                                        ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool/accession.hpp:82:38: note: the temporary was destroyed at the end of the full expression 'make_sequence<const char**>((& sratools::Accession::extensions[1]), 3)'
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                         ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 82%] Linking CXX executable ../../../bin/sam-factory
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sam-factory && /usr/bin/cmake -E cmake_link_script CMakeFiles/sam-factory.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sam-factory.dir/link.d "CMakeFiles/sam-factory.dir/sam-factory.cpp.o" -o ../../../bin/sam-factory  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 82%] Built target sam-factory
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/DependInfo.cmake "--color="
[ 82%] Linking CXX executable ../../../test-bin/Test_Drivertool_UUID
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Drivertool_UUID.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 82%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/test-tool-args.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/test-tool-args.cpp.o -MF CMakeFiles/Test_Drivertool_ToolArgs.dir/test-tool-args.cpp.o.d -o CMakeFiles/Test_Drivertool_ToolArgs.dir/test-tool-args.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/test-tool-args.cpp
[ 82%] Building CXX object tools/test-tools/qa-stats/CMakeFiles/qa-stats.dir/input.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/qa-stats && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/test-tools/qa-stats/CMakeFiles/qa-stats.dir/input.cpp.o -MF CMakeFiles/qa-stats.dir/input.cpp.o.d -o CMakeFiles/qa-stats.dir/input.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/qa-stats/input.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Drivertool_UUID.dir/link.d "CMakeFiles/Test_Drivertool_UUID.dir/test-uuid.cpp.o" -o ../../../test-bin/Test_Drivertool_UUID
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 82%] Built target Test_Drivertool_UUID
make  -f test/external/kdbmeta/CMakeFiles/Build-kdbmeta.dir/build.make test/external/kdbmeta/CMakeFiles/Build-kdbmeta.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/kdbmeta /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/kdbmeta /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/kdbmeta/CMakeFiles/Build-kdbmeta.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/kdbmeta/CMakeFiles/Build-kdbmeta.dir/build.make test/external/kdbmeta/CMakeFiles/Build-kdbmeta.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/kdbmeta/CMakeFiles/Build-kdbmeta.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 82%] Built target Build-kdbmeta
make  -f test/external/prefetch/CMakeFiles/SlowTest_Prefetch.dir/build.make test/external/prefetch/CMakeFiles/SlowTest_Prefetch.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/prefetch /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/prefetch /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/prefetch/CMakeFiles/SlowTest_Prefetch.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/prefetch/CMakeFiles/SlowTest_Prefetch.dir/build.make test/external/prefetch/CMakeFiles/SlowTest_Prefetch.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 82%] Building CXX object test/external/prefetch/CMakeFiles/SlowTest_Prefetch.dir/test-quality.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/prefetch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/external/prefetch\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/prefetch/CMakeFiles/SlowTest_Prefetch.dir/test-quality.cpp.o -MF CMakeFiles/SlowTest_Prefetch.dir/test-quality.cpp.o.d -o CMakeFiles/SlowTest_Prefetch.dir/test-quality.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/prefetch/test-quality.cpp
[ 83%] Linking CXX executable ../../../test-bin/SlowTest_Prefetch
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/prefetch && /usr/bin/cmake -E cmake_link_script CMakeFiles/SlowTest_Prefetch.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/SlowTest_Prefetch.dir/link.d "CMakeFiles/SlowTest_Prefetch.dir/test-quality.cpp.o" -o ../../../test-bin/SlowTest_Prefetch  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 83%] Built target SlowTest_Prefetch
make  -f test/external/srapath/CMakeFiles/Build-srapath.dir/build.make test/external/srapath/CMakeFiles/Build-srapath.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/srapath /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/srapath /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/srapath/CMakeFiles/Build-srapath.dir/DependInfo.cmake "--color="
[ 83%] Building C object tools/test-tools/sam-analyze/CMakeFiles/sam-analyze.dir/sqlite3.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sam-analyze && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/sam-analyze/CMakeFiles/sam-analyze.dir/sqlite3.c.o -MF CMakeFiles/sam-analyze.dir/sqlite3.c.o.d -o CMakeFiles/sam-analyze.dir/sqlite3.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/sam-analyze/sqlite3.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/srapath/CMakeFiles/Build-srapath.dir/build.make test/external/srapath/CMakeFiles/Build-srapath.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/srapath/CMakeFiles/Build-srapath.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 83%] Built target Build-srapath
make  -f test/external/sra-pileup/CMakeFiles/Build-sra-pileup.dir/build.make test/external/sra-pileup/CMakeFiles/Build-sra-pileup.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-pileup /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/sra-pileup /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/sra-pileup/CMakeFiles/Build-sra-pileup.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/sra-pileup/CMakeFiles/Build-sra-pileup.dir/build.make test/external/sra-pileup/CMakeFiles/Build-sra-pileup.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/sra-pileup/CMakeFiles/Build-sra-pileup.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 83%] Built target Build-sra-pileup
make  -f test/external/sra-stat/CMakeFiles/Build-sra-stat.dir/build.make test/external/sra-stat/CMakeFiles/Build-sra-stat.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-stat /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/sra-stat /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/sra-stat/CMakeFiles/Build-sra-stat.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/sra-stat/CMakeFiles/Build-sra-stat.dir/build.make test/external/sra-stat/CMakeFiles/Build-sra-stat.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/sra-stat/CMakeFiles/Build-sra-stat.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 83%] Built target Build-sra-stat
make  -f test/external/sra-stat/CMakeFiles/testAssemblyStatistics.dir/build.make test/external/sra-stat/CMakeFiles/testAssemblyStatistics.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-stat /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/sra-stat /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/sra-stat/CMakeFiles/testAssemblyStatistics.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/sra-stat/CMakeFiles/testAssemblyStatistics.dir/build.make test/external/sra-stat/CMakeFiles/testAssemblyStatistics.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 83%] Building CXX object test/external/sra-stat/CMakeFiles/testAssemblyStatistics.dir/testAssemblyStatistics.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/sra-stat && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/external/sra-stat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/sra-stat/CMakeFiles/testAssemblyStatistics.dir/testAssemblyStatistics.cpp.o -MF CMakeFiles/testAssemblyStatistics.dir/testAssemblyStatistics.cpp.o.d -o CMakeFiles/testAssemblyStatistics.dir/testAssemblyStatistics.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-stat/testAssemblyStatistics.cpp
[ 83%] Linking CXX executable ../../test-bin/test-vdb
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/vdb && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-vdb.dir/link.txt --verbose=1
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/vdb-sqlite/sqlite3.c: In function 'sqlite3VdbeExpandSql':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/vdb-sqlite/sqlite3.c:77729:10: warning: function may return address of local variable [-Wreturn-local-addr]
77729 |   return sqlite3StrAccumFinish(&out);
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/vdb-sqlite/sqlite3.c:77625:8: note: declared here
77625 |   char zBase[100];         /* Initial working space */
      |        ^~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/vdb-sqlite/sqlite3.c:77729:10: warning: function may return address of local variable [-Wreturn-local-addr]
77729 |   return sqlite3StrAccumFinish(&out);
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/vdb-sqlite/sqlite3.c:77625:8: note: declared here
77625 |   char zBase[100];         /* Initial working space */
      |        ^~~~~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/vdb-sqlite/sqlite3.c:77625:8: note: declared here
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/vdb-sqlite/sqlite3.c:77625:8: note: declared here
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/vdb-sqlite/sqlite3.c:77625:8: note: declared here
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-vdb.dir/link.d "CMakeFiles/test-vdb.dir/test-vdb.cpp.o" -o ../../test-bin/test-vdb  -lkapp /usr/lib/aarch64-linux-gnu/libkapp.a ../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 83%] Built target test-vdb
make  -f test/external/vdb-config/CMakeFiles/test-vdb-config-model.dir/build.make test/external/vdb-config/CMakeFiles/test-vdb-config-model.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/vdb-config /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-config /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-config/CMakeFiles/test-vdb-config-model.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/vdb-config/CMakeFiles/test-vdb-config-model.dir/build.make test/external/vdb-config/CMakeFiles/test-vdb-config-model.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 83%] Building CXX object test/external/vdb-config/CMakeFiles/test-vdb-config-model.dir/test-vdb-config-model.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-config && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/external/vdb-config\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/vdb-config/CMakeFiles/test-vdb-config-model.dir/test-vdb-config-model.cpp.o -MF CMakeFiles/test-vdb-config-model.dir/test-vdb-config-model.cpp.o.d -o CMakeFiles/test-vdb-config-model.dir/test-vdb-config-model.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/vdb-config/test-vdb-config-model.cpp
[ 83%] Linking CXX executable ../../../test-bin/Test_Drivertool_FilePath
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Drivertool_FilePath.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Drivertool_FilePath.dir/link.d "CMakeFiles/Test_Drivertool_FilePath.dir/test-filepath.cpp.o" -o ../../../test-bin/Test_Drivertool_FilePath  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 83%] Built target Test_Drivertool_FilePath
make  -f test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/build.make test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/build.make test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 83%] Building CXX object test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/test-view-spec.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/external/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/test-view-spec.cpp.o -MF CMakeFiles/Test_Vdb_dump_view-spec.dir/test-view-spec.cpp.o.d -o CMakeFiles/Test_Vdb_dump_view-spec.dir/test-view-spec.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/vdb-dump/test-view-spec.cpp
[ 83%] Linking CXX executable ../../../test-bin/Test_Drivertool_JsonParsing
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Drivertool_JsonParsing.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Drivertool_JsonParsing.dir/link.d "CMakeFiles/Test_Drivertool_JsonParsing.dir/test-json-parse.cpp.o" -o ../../../test-bin/Test_Drivertool_JsonParsing
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 83%] Built target Test_Drivertool_JsonParsing
make  -f test/external/vdb-dump/CMakeFiles/vdb-dump-makedb.dir/build.make test/external/vdb-dump/CMakeFiles/vdb-dump-makedb.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump/CMakeFiles/vdb-dump-makedb.dir/DependInfo.cmake "--color="
[ 83%] Linking CXX executable ../../../test-bin/testAssemblyStatistics
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/vdb-dump/CMakeFiles/vdb-dump-makedb.dir/build.make test/external/vdb-dump/CMakeFiles/vdb-dump-makedb.dir/build
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/sra-stat && /usr/bin/cmake -E cmake_link_script CMakeFiles/testAssemblyStatistics.dir/link.txt --verbose=1
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 83%] Building CXX object test/external/vdb-dump/CMakeFiles/vdb-dump-makedb.dir/makedb.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/external/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/vdb-dump/CMakeFiles/vdb-dump-makedb.dir/makedb.cpp.o -MF CMakeFiles/vdb-dump-makedb.dir/makedb.cpp.o.d -o CMakeFiles/vdb-dump-makedb.dir/makedb.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/vdb-dump/makedb.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testAssemblyStatistics.dir/link.d CMakeFiles/testAssemblyStatistics.dir/testAssemblyStatistics.cpp.o -o ../../../test-bin/testAssemblyStatistics  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 83%] Built target testAssemblyStatistics
make  -f test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-alias.dir/build.make test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-alias.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-alias.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-alias.dir/build.make test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-alias.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 83%] Building CXX object test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-alias.dir/test-view-alias.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/external/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-alias.dir/test-view-alias.cpp.o -MF CMakeFiles/Test_Vdb_dump_view-alias.dir/test-view-alias.cpp.o.d -o CMakeFiles/Test_Vdb_dump_view-alias.dir/test-view-alias.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/vdb-dump/test-view-alias.cpp
[ 84%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/tool-args.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/tool-args.cpp.o -MF CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/tool-args.cpp.o.d -o CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/tool-args.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/tool-args.cpp
[ 84%] Linking CXX executable ../../../test-bin/vdb-dump-makedb
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-dump-makedb.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-dump-makedb.dir/link.d "CMakeFiles/vdb-dump-makedb.dir/makedb.cpp.o" -o ../../../test-bin/vdb-dump-makedb  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 84%] Built target vdb-dump-makedb
make  -f test/external/vdb-validate/CMakeFiles/Test_VdbValidate_Unit.dir/build.make test/external/vdb-validate/CMakeFiles/Test_VdbValidate_Unit.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/vdb-validate /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-validate /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-validate/CMakeFiles/Test_VdbValidate_Unit.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/vdb-validate/CMakeFiles/Test_VdbValidate_Unit.dir/build.make test/external/vdb-validate/CMakeFiles/Test_VdbValidate_Unit.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 84%] Building CXX object test/external/vdb-validate/CMakeFiles/Test_VdbValidate_Unit.dir/test-vdb-validate.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-validate && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/external/vdb-validate\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-validate -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/vdb-validate/CMakeFiles/Test_VdbValidate_Unit.dir/test-vdb-validate.cpp.o -MF CMakeFiles/Test_VdbValidate_Unit.dir/test-vdb-validate.cpp.o.d -o CMakeFiles/Test_VdbValidate_Unit.dir/test-vdb-validate.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/vdb-validate/test-vdb-validate.cpp
[ 84%] Linking CXX executable ../../../test-bin/Test_Vdb_dump_view-alias
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Vdb_dump_view-alias.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Vdb_dump_view-alias.dir/link.d "CMakeFiles/Test_Vdb_dump_view-alias.dir/test-view-alias.cpp.o" -o ../../../test-bin/Test_Vdb_dump_view-alias  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 84%] Built target Test_Vdb_dump_view-alias
make  -f test/external/sra-info/CMakeFiles/Test_SraInfo_Unit.dir/build.make test/external/sra-info/CMakeFiles/Test_SraInfo_Unit.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/sra-info /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/sra-info/CMakeFiles/Test_SraInfo_Unit.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/sra-info/CMakeFiles/Test_SraInfo_Unit.dir/build.make test/external/sra-info/CMakeFiles/Test_SraInfo_Unit.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 85%] Building CXX object test/external/sra-info/CMakeFiles/Test_SraInfo_Unit.dir/test-sra-info.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/sra-info && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/external/sra-info\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-info -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/sra-info/CMakeFiles/Test_SraInfo_Unit.dir/test-sra-info.cpp.o -MF CMakeFiles/Test_SraInfo_Unit.dir/test-sra-info.cpp.o.d -o CMakeFiles/Test_SraInfo_Unit.dir/test-sra-info.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info/test-sra-info.cpp
[ 85%] Linking CXX executable ../../../test-bin/Test_Drivertool_SDLResponse
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Drivertool_SDLResponse.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Drivertool_SDLResponse.dir/link.d "CMakeFiles/Test_Drivertool_SDLResponse.dir/test-sdl-response.cpp.o" -o ../../../test-bin/Test_Drivertool_SDLResponse
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 85%] Built target Test_Drivertool_SDLResponse
make  -f test/external/sra-info/CMakeFiles/Build-sra-info.dir/build.make test/external/sra-info/CMakeFiles/Build-sra-info.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/sra-info /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/sra-info/CMakeFiles/Build-sra-info.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/sra-info/CMakeFiles/Build-sra-info.dir/build.make test/external/sra-info/CMakeFiles/Build-sra-info.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/sra-info/CMakeFiles/Build-sra-info.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 85%] Built target Build-sra-info
make  -f test/loaders/bam-load/CMakeFiles/Test_BamLoader_platform.dir/build.make test/loaders/bam-load/CMakeFiles/Test_BamLoader_platform.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/bam-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/bam-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/bam-load/CMakeFiles/Test_BamLoader_platform.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/bam-load/CMakeFiles/Test_BamLoader_platform.dir/build.make test/loaders/bam-load/CMakeFiles/Test_BamLoader_platform.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 85%] Building CXX object test/loaders/bam-load/CMakeFiles/Test_BamLoader_platform.dir/sam-platform.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/bam-load && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/loaders/bam-load/CMakeFiles/Test_BamLoader_platform.dir/sam-platform.cpp.o -MF CMakeFiles/Test_BamLoader_platform.dir/sam-platform.cpp.o.d -o CMakeFiles/Test_BamLoader_platform.dir/sam-platform.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/bam-load/sam-platform.cpp
[ 85%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/command-line.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/command-line.cpp.o -MF CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/command-line.cpp.o.d -o CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/command-line.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/command-line.cpp
[ 85%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/run-source.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/run-source.cpp.o -MF CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/run-source.cpp.o.d -o CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/run-source.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/run-source.cpp
[ 85%] Building CXX object tools/test-tools/qa-stats/CMakeFiles/qa-stats.dir/output.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/qa-stats && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/test-tools/qa-stats/CMakeFiles/qa-stats.dir/output.cpp.o -MF CMakeFiles/qa-stats.dir/output.cpp.o.d -o CMakeFiles/qa-stats.dir/output.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/qa-stats/output.cpp
[ 85%] Linking CXX executable ../../../test-bin/Test_BamLoader_platform
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/bam-load && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_BamLoader_platform.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_BamLoader_platform.dir/link.d "CMakeFiles/Test_BamLoader_platform.dir/sam-platform.cpp.o" -o ../../../test-bin/Test_BamLoader_platform
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 85%] Built target Test_BamLoader_platform
make  -f test/loaders/loader/CMakeFiles/Test_KAPP_qfile.dir/build.make test/loaders/loader/CMakeFiles/Test_KAPP_qfile.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/loader/CMakeFiles/Test_KAPP_qfile.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/loader/CMakeFiles/Test_KAPP_qfile.dir/build.make test/loaders/loader/CMakeFiles/Test_KAPP_qfile.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
In file included from /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/sratools.hpp:31,
                 from /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/run-source.hpp:39,
                 from /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/run-source.cpp:51:
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/accession.hpp: In static member function 'static const char* sratools::Accession::qualityTypeFor(const char*)':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/accession.hpp:82:56: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                                                        ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/accession.hpp:82:38: note: the temporary was destroyed at the end of the full expression 'make_sequence<const char**>((& sratools::Accession::extensions[1]), 3)'
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                         ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 85%] Building C object test/loaders/loader/CMakeFiles/Test_KAPP_qfile.dir/qfiletest.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/loaders/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT test/loaders/loader/CMakeFiles/Test_KAPP_qfile.dir/qfiletest.c.o -MF CMakeFiles/Test_KAPP_qfile.dir/qfiletest.c.o.d -o CMakeFiles/Test_KAPP_qfile.dir/qfiletest.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/loader/qfiletest.c
[ 85%] Linking C executable ../../../test-bin/Test_KAPP_qfile
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_KAPP_qfile.dir/link.txt --verbose=1
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_KAPP_qfile.dir/link.d CMakeFiles/Test_KAPP_qfile.dir/qfiletest.c.o -o ../../../test-bin/Test_KAPP_qfile  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 85%] Built target Test_KAPP_qfile
make  -f test/loaders/loader/CMakeFiles/Test_LOADERFILE.dir/build.make test/loaders/loader/CMakeFiles/Test_LOADERFILE.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/loader/CMakeFiles/Test_LOADERFILE.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/loader/CMakeFiles/Test_LOADERFILE.dir/build.make test/loaders/loader/CMakeFiles/Test_LOADERFILE.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 85%] Building CXX object test/loaders/loader/CMakeFiles/Test_LOADERFILE.dir/test-loaderfile.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/loaders/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/loaders/loader/CMakeFiles/Test_LOADERFILE.dir/test-loaderfile.cpp.o -MF CMakeFiles/Test_LOADERFILE.dir/test-loaderfile.cpp.o.d -o CMakeFiles/Test_LOADERFILE.dir/test-loaderfile.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/loader/test-loaderfile.cpp
[ 85%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/build-version.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/build-version.cpp.o -MF CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/build-version.cpp.o.d -o CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/build-version.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/build-version.cpp
[ 85%] Linking CXX executable ../../../bin/qa-stats
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/qa-stats && /usr/bin/cmake -E cmake_link_script CMakeFiles/qa-stats.dir/link.txt --verbose=1
[ 85%] Linking CXX executable ../../../test-bin/Test_VdbValidate_Unit
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-validate && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_VdbValidate_Unit.dir/link.txt --verbose=1
[ 85%] Building C object test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-view-spec.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/external/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-view-spec.c.o -MF CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-view-spec.c.o.d -o CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-view-spec.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump/vdb-dump-view-spec.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/qa-stats.dir/link.d "CMakeFiles/qa-stats.dir/main.cpp.o" "CMakeFiles/qa-stats.dir/input.cpp.o" "CMakeFiles/qa-stats.dir/output.cpp.o" -o ../../../bin/qa-stats
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 85%] Built target qa-stats
make  -f test/loaders/loader/CMakeFiles/Test_LOADER.dir/build.make test/loaders/loader/CMakeFiles/Test_LOADER.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/loader/CMakeFiles/Test_LOADER.dir/DependInfo.cmake "--color="
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_VdbValidate_Unit.dir/link.d "CMakeFiles/Test_VdbValidate_Unit.dir/test-vdb-validate.cpp.o" -o ../../../test-bin/Test_VdbValidate_Unit  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 85%] Building C object test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-helper.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/external/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-helper.c.o -MF CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-helper.c.o.d -o CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-helper.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump/vdb-dump-helper.c
make  -f test/loaders/loader/CMakeFiles/Test_LOADER.dir/build.make test/loaders/loader/CMakeFiles/Test_LOADER.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 85%] Built target Test_VdbValidate_Unit
make  -f test/internal/align/CMakeFiles/Test_Align_samextract.dir/build.make test/internal/align/CMakeFiles/Test_Align_samextract.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/align /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/align /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/align/CMakeFiles/Test_Align_samextract.dir/DependInfo.cmake "--color="
[ 85%] Building CXX object test/loaders/loader/CMakeFiles/Test_LOADER.dir/loadertest.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/loaders/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/loaders/loader/CMakeFiles/Test_LOADER.dir/loadertest.cpp.o -MF CMakeFiles/Test_LOADER.dir/loadertest.cpp.o.d -o CMakeFiles/Test_LOADER.dir/loadertest.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/loader/loadertest.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/internal/align/CMakeFiles/Test_Align_samextract.dir/build.make test/internal/align/CMakeFiles/Test_Align_samextract.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 85%] Building CXX object test/internal/align/CMakeFiles/Test_Align_samextract.dir/test-samextract.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/align && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/internal/align\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/usr/include/ncbi-vdb/ext -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/../ncbi-vdb/interfaces/ext -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/internal/align/CMakeFiles/Test_Align_samextract.dir/test-samextract.cpp.o -MF CMakeFiles/Test_Align_samextract.dir/test-samextract.cpp.o.d -o CMakeFiles/Test_Align_samextract.dir/test-samextract.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/align/test-samextract.cpp
/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/loader/loadertest.cpp:307:117: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  307 |         REQUIRE_RC ( KLoaderMeta_Write ( node, LoaderName.c_str(), __DATE__, FormatterName.c_str(), KAppVersion() ) );
      |                                                                                                                     ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/loader/loadertest.cpp:321:80: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  321 |     REQUIRE_EQ ( string ( __DATE__), GetMetadata ( "SOFTWARE/loader", "date" ) );
      |                                                                                ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/loader/loadertest.cpp:350:143: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  350 |         REQUIRE_RC ( KLoaderMeta_WriteWithVersion ( node, LoaderName.c_str(), __DATE__, LoaderVersion, FormatterName.c_str(), KAppVersion() ) );
      |                                                                                                                                               ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/loader/loadertest.cpp:364:80: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  364 |     REQUIRE_EQ ( string ( __DATE__), GetMetadata ( "SOFTWARE/loader", "date" ) );
      |                                                                                ^
[ 85%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/file-path.posix.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/file-path.posix.cpp.o -MF CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/file-path.posix.cpp.o.d -o CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/file-path.posix.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/file-path.posix.cpp
[ 86%] Building C object test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-context.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/external/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-context.c.o -MF CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-context.c.o.d -o CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-context.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump/vdb-dump-context.c
[ 87%] Linking CXX executable ../../../test-bin/test-vdb-config-model
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-config && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-vdb-config-model.dir/link.txt --verbose=1
[ 87%] Linking CXX executable ../../../../test-bin/test-general-loader
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-general-loader.dir/link.txt --verbose=1
[ 87%] Building C object test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-coldefs.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/external/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-coldefs.c.o -MF CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-coldefs.c.o.d -o CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-coldefs.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump/vdb-dump-coldefs.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-vdb-config-model.dir/link.d "CMakeFiles/test-vdb-config-model.dir/test-vdb-config-model.cpp.o" -o ../../../test-bin/test-vdb-config-model  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-general-loader.dir/link.d "CMakeFiles/test-general-loader.dir/test-general-loader.cpp.o" "CMakeFiles/test-general-loader.dir/testsource.cpp.o" -o ../../../../test-bin/test-general-loader  ../../../../ilib/libgeneral-writer.a -lkapp -lktst ../../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 87%] Built target test-vdb-config-model
make  -f test/internal/align-cache/CMakeFiles/Build-align-cache.dir/build.make test/internal/align-cache/CMakeFiles/Build-align-cache.dir/depend
[ 87%] Built target test-general-loader
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/align-cache /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/align-cache /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/align-cache/CMakeFiles/Build-align-cache.dir/DependInfo.cmake "--color="
make  -f test/internal/copycat/CMakeFiles/Build-copycat.dir/build.make test/internal/copycat/CMakeFiles/Build-copycat.dir/depend
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/internal/align-cache/CMakeFiles/Build-align-cache.dir/build.make test/internal/align-cache/CMakeFiles/Build-align-cache.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/copycat /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/copycat /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/copycat/CMakeFiles/Build-copycat.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/internal/align-cache/CMakeFiles/Build-align-cache.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/internal/copycat/CMakeFiles/Build-copycat.dir/build.make test/internal/copycat/CMakeFiles/Build-copycat.dir/build
[ 87%] Built target Build-align-cache
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/internal/copycat/CMakeFiles/Build-copycat.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 87%] Built target Build-copycat
make  -f test/internal/copycat/CMakeFiles/Test_KFF.dir/build.make test/internal/copycat/CMakeFiles/Test_KFF.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/copycat /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/copycat /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/copycat/CMakeFiles/Test_KFF.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/internal/copycat/CMakeFiles/Test_KFF.dir/build.make test/internal/copycat/CMakeFiles/Test_KFF.dir/build
[ 87%] Building C object test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-str.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/external/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-str.c.o -MF CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-str.c.o.d -o CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-str.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-dump/vdb-dump-str.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 87%] Building CXX object test/internal/copycat/CMakeFiles/Test_KFF.dir/kfftest.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/copycat && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/internal/copycat/CMakeFiles/Test_KFF.dir/kfftest.cpp.o -MF CMakeFiles/Test_KFF.dir/kfftest.cpp.o.d -o CMakeFiles/Test_KFF.dir/kfftest.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/copycat/kfftest.cpp
[ 87%] Linking CXX executable ../../../test-bin/Test_LOADERFILE
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_LOADERFILE.dir/link.txt --verbose=1
[ 87%] Linking CXX executable ../../../test-bin/Test_Drivertool_ToolArgs
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Drivertool_ToolArgs.dir/link.txt --verbose=1
[ 87%] Building C object test/internal/copycat/CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffext.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT test/internal/copycat/CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffext.c.o -MF CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffext.c.o.d -o CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffext.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat/kff/ffext.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_LOADERFILE.dir/link.d "CMakeFiles/Test_LOADERFILE.dir/test-loaderfile.cpp.o" -o ../../../test-bin/Test_LOADERFILE  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 87%] Built target Test_LOADERFILE
make  -f test/internal/make-read-filter/CMakeFiles/Build-make-read-filter.dir/build.make test/internal/make-read-filter/CMakeFiles/Build-make-read-filter.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/make-read-filter /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/make-read-filter /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/make-read-filter/CMakeFiles/Build-make-read-filter.dir/DependInfo.cmake "--color="
[ 87%] Linking CXX executable ../../../test-bin/Test_Vdb_dump_view-spec
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Vdb_dump_view-spec.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/internal/make-read-filter/CMakeFiles/Build-make-read-filter.dir/build.make test/internal/make-read-filter/CMakeFiles/Build-make-read-filter.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/internal/make-read-filter/CMakeFiles/Build-make-read-filter.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 87%] Built target Build-make-read-filter
make  -f test/internal/read-filter-redact/CMakeFiles/Build-read-filter-redact.dir/build.make test/internal/read-filter-redact/CMakeFiles/Build-read-filter-redact.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/read-filter-redact /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/read-filter-redact /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/read-filter-redact/CMakeFiles/Build-read-filter-redact.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/internal/read-filter-redact/CMakeFiles/Build-read-filter-redact.dir/build.make test/internal/read-filter-redact/CMakeFiles/Build-read-filter-redact.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/internal/read-filter-redact/CMakeFiles/Build-read-filter-redact.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 87%] Building C object test/internal/copycat/CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffkey.c.o
[ 87%] Built target Build-read-filter-redact
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT test/internal/copycat/CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffkey.c.o -MF CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffkey.c.o.d -o CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffkey.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat/kff/ffkey.c
make  -f test/internal/vdb-copy/CMakeFiles/Build-vdb-copy.dir/build.make test/internal/vdb-copy/CMakeFiles/Build-vdb-copy.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/vdb-copy /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/vdb-copy /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/vdb-copy/CMakeFiles/Build-vdb-copy.dir/DependInfo.cmake "--color="
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Drivertool_ToolArgs.dir/link.d "CMakeFiles/Test_Drivertool_ToolArgs.dir/test-tool-args.cpp.o" "CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/tool-args.cpp.o" "CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/command-line.cpp.o" "CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/build-version.cpp.o" "CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/file-path.posix.cpp.o" -o ../../../test-bin/Test_Drivertool_ToolArgs  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/internal/vdb-copy/CMakeFiles/Build-vdb-copy.dir/build.make test/internal/vdb-copy/CMakeFiles/Build-vdb-copy.dir/build
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Vdb_dump_view-spec.dir/link.d "CMakeFiles/Test_Vdb_dump_view-spec.dir/test-view-spec.cpp.o" "CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-view-spec.c.o" "CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-helper.c.o" "CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-context.c.o" "CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-coldefs.c.o" "CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-str.c.o" -o ../../../test-bin/Test_Vdb_dump_view-spec  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/internal/vdb-copy/CMakeFiles/Build-vdb-copy.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 87%] Built target Test_Drivertool_ToolArgs
[ 87%] Built target Test_Vdb_dump_view-spec
make  -f test/internal/vdb-diff/CMakeFiles/Build-vdb-diff.dir/build.make test/internal/vdb-diff/CMakeFiles/Build-vdb-diff.dir/depend
[ 87%] Built target Build-vdb-copy
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/vdb-diff /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/vdb-diff /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/vdb-diff/CMakeFiles/Build-vdb-diff.dir/DependInfo.cmake "--color="
[ 88%] Building C object test/internal/copycat/CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/fileformat.c.o
make  -f ngs/ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/build.make ngs/ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/depend
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT test/internal/copycat/CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/fileformat.c.o -MF CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/fileformat.c.o.d -o CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/fileformat.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat/kff/fileformat.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-c++ /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-c++ /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/internal/vdb-diff/CMakeFiles/Build-vdb-diff.dir/build.make test/internal/vdb-diff/CMakeFiles/Build-vdb-diff.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/internal/vdb-diff/CMakeFiles/Build-vdb-diff.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 88%] Built target Build-vdb-diff
make  -f ngs/ngs-java/CMakeFiles/ngs-doc-jar.dir/build.make ngs/ngs-java/CMakeFiles/ngs-doc-jar.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-doc-jar.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/build.make ngs/ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 88%] Building CXX object ngs/ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/NCBI-NGS.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs-c++\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/NCBI-NGS.cpp.o -MF CMakeFiles/ncbi-ngs-c++.dir/NCBI-NGS.cpp.o.d -o CMakeFiles/ncbi-ngs-c++.dir/NCBI-NGS.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs-c++/NCBI-NGS.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-java/CMakeFiles/ngs-doc-jar.dir/build.make ngs/ngs-java/CMakeFiles/ngs-doc-jar.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc && bash -c /usr/bin/jar\ -cf\ /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib/ngs-doc.jar\ .
make  -f ngs/ngs-java/CMakeFiles/ngs-src-jar.dir/build.make ngs/ngs-java/CMakeFiles/ngs-src-jar.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-src-jar.dir/DependInfo.cmake "--color="
[ 88%] Building C object test/internal/copycat/CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffmagic.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT test/internal/copycat/CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffmagic.c.o -MF CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffmagic.c.o.d -o CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffmagic.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/copycat/kff/ffmagic.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-java/CMakeFiles/ngs-src-jar.dir/build.make ngs/ngs-java/CMakeFiles/ngs-src-jar.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java && bash -c /usr/bin/jar\ -cf\ /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib/ngs-src.jar\ \ ngs/ErrorMsg.java\ ngs/Statistics.java\ ngs/Fragment.java\ ngs/FragmentIterator.java\ ngs/Read.java\ ngs/ReadIterator.java\ ngs/ReadGroup.java\ ngs/ReadGroupIterator.java\ ngs/Alignment.java\ ngs/AlignmentIterator.java\ ngs/PileupEvent.java\ ngs/PileupEventIterator.java\ ngs/Pileup.java\ ngs/PileupIterator.java\ ngs/Reference.java\ ngs/ReferenceIterator.java\ ngs/ReadCollection.java\ ngs/Package.java\ ngs/itf/Refcount.java\ ngs/itf/StatisticsItf.java\ ngs/itf/FragmentItf.java\ ngs/itf/FragmentIteratorItf.java\ ngs/itf/ReadItf.java\ ngs/itf/ReadIteratorItf.java\ ngs/itf/ReadGroupItf.java\ ngs/itf/ReadGroupIteratorItf.java\ ngs/itf/AlignmentItf.java\ ngs/itf/AlignmentIteratorItf.java\ ngs/itf/PileupEventItf.java\ ngs/itf/PileupEventIteratorItf.java\ ngs/itf/PileupItf.java\ ngs/itf/PileupIteratorItf.java\ ngs/itf/ReferenceItf.java\ ngs/itf/ReferenceIteratorItf.java\ ngs/itf/ReadCollectionItf.java\ gov/nih/nlm/ncbi/ngs/DownloadManager.java\ gov/nih/nlm/ncbi/ngs/FileCreator.java\ gov/nih/nlm/ncbi/ngs/HttpManager.java\ gov/nih/nlm/ncbi/ngs/LibDependencies.java\ gov/nih/nlm/ncbi/ngs/LibManager.java\ gov/nih/nlm/ncbi/ngs/LibPathIterator.java\ gov/nih/nlm/ncbi/ngs/LibVersionChecker.java\ gov/nih/nlm/ncbi/ngs/LMProperties.java\ gov/nih/nlm/ncbi/ngs/Logger.java\ gov/nih/nlm/ncbi/ngs/Manager.java\ gov/nih/nlm/ncbi/ngs/NGS.java\ gov/nih/nlm/ncbi/ngs/Version.java\ gov/nih/nlm/ncbi/ngs/error/LibraryLoadError.java\ gov/nih/nlm/ncbi/ngs/error/LibraryNotFoundError.java\ gov/nih/nlm/ncbi/ngs/error/LibraryIncompatibleVersionError.java\ gov/nih/nlm/ncbi/ngs/error/cause/ConnectionProblemCause.java\ gov/nih/nlm/ncbi/ngs/error/cause/DownloadDisabledCause.java\ gov/nih/nlm/ncbi/ngs/error/cause/InvalidLibraryCause.java\ gov/nih/nlm/ncbi/ngs/error/cause/JvmErrorCause.java\ gov/nih/nlm/ncbi/ngs/error/cause/LibraryLoadCause.java\ gov/nih/nlm/ncbi/ngs/error/cause/OutdatedJarCause.java\ gov/nih/nlm/ncbi/ngs/error/cause/PrereleaseReqLibCause.java\ gov/nih/nlm/ncbi/ngs/error/cause/UnsupportedArchCause.java
make  -f ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir/build.make ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/examples /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/examples /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir/build.make ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 89%] Building Java objects for ngs-examples.jar
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/examples && /usr/bin/cmake -DCMAKE_JAVA_CLASS_OUTPUT_PATH=/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir -DCMAKE_JAR_CLASSES_PREFIX= -P /usr/share/cmake-3.31/Modules/UseJava/ClearClassFiles.cmake --log-level STATUS
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/examples && /usr/bin/javac -classpath :/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/examples:/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib:/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib/ngs-java.jar -d /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir @/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir/java_sources
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 89%] Built target ngs-src-jar
[ 89%] Built target ngs-doc-jar
make  -f libs/general-writer/CMakeFiles/gw-dumper.dir/build.make libs/general-writer/CMakeFiles/gw-dumper.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/general-writer/test/CMakeFiles/test-general-writer.dir/build.make libs/general-writer/test/CMakeFiles/test-general-writer.dir/depend
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/general-writer /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/general-writer /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/general-writer/CMakeFiles/gw-dumper.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/general-writer/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/general-writer/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/general-writer/test/CMakeFiles/test-general-writer.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/general-writer/CMakeFiles/gw-dumper.dir/build.make libs/general-writer/CMakeFiles/gw-dumper.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/general-writer/test/CMakeFiles/test-general-writer.dir/build.make libs/general-writer/test/CMakeFiles/test-general-writer.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 89%] Building CXX object libs/general-writer/CMakeFiles/gw-dumper.dir/gw-dumper.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/general-writer && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT libs/general-writer/CMakeFiles/gw-dumper.dir/gw-dumper.cpp.o -MF CMakeFiles/gw-dumper.dir/gw-dumper.cpp.o.d -o CMakeFiles/gw-dumper.dir/gw-dumper.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/general-writer/gw-dumper.cpp
[ 89%] Building CXX object libs/general-writer/test/CMakeFiles/test-general-writer.dir/test-general-writer.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/general-writer/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT libs/general-writer/test/CMakeFiles/test-general-writer.dir/test-general-writer.cpp.o -MF CMakeFiles/test-general-writer.dir/test-general-writer.cpp.o.d -o CMakeFiles/test-general-writer.dir/test-general-writer.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/general-writer/test/test-general-writer.cpp
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[ 89%] Linking CXX executable ../../../test-bin/Test_KFF
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-c++ && /usr/bin/cmake -P CMakeFiles/ncbi-ngs-c++.dir/cmake_clean_target.cmake
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/copycat && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_KFF.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-c++ && /usr/bin/cmake -E cmake_link_script CMakeFiles/ncbi-ngs-c++.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/libncbi-ngs-c++.a "CMakeFiles/ncbi-ngs-c++.dir/NCBI-NGS.cpp.o"
/usr/bin/ranlib ../../../lib/libncbi-ngs-c++.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib && rm -f libncbi-ngs-c++.a.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib && mv libncbi-ngs-c++.a libncbi-ngs-c++.a.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib && ln -f -s libncbi-ngs-c++.a.3.0.9 libncbi-ngs-c++.a.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib && ln -f -s libncbi-ngs-c++.a.3 libncbi-ngs-c++.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib && ln -f -s libncbi-ngs-c++.a libncbi-ngs-c++-static.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_KFF.dir/link.d CMakeFiles/Test_KFF.dir/kfftest.cpp.o CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffext.c.o CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffkey.c.o CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/fileformat.c.o CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffmagic.c.o -o ../../../test-bin/Test_KFF  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmagic
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 89%] Built target ncbi-ngs-c++
make  -f tools/external/prefetch/CMakeFiles/prefetch.dir/build.make tools/external/prefetch/CMakeFiles/prefetch.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/prefetch /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/prefetch /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/prefetch/CMakeFiles/prefetch.dir/DependInfo.cmake "--color="
[ 89%] Built target Test_KFF
make  -f tools/external/vdb-config/CMakeFiles/vdb-config.dir/build.make tools/external/vdb-config/CMakeFiles/vdb-config.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/CMakeFiles/vdb-config.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_LOADER.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/vdb-config/CMakeFiles/vdb-config.dir/build.make tools/external/vdb-config/CMakeFiles/vdb-config.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 89%] Building C object tools/external/prefetch/CMakeFiles/prefetch.dir/kfile-no-q.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/prefetch && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/prefetch\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/prefetch/CMakeFiles/prefetch.dir/kfile-no-q.c.o -MF CMakeFiles/prefetch.dir/kfile-no-q.c.o.d -o CMakeFiles/prefetch.dir/kfile-no-q.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/prefetch/kfile-no-q.c
[ 89%] Building CXX object tools/external/vdb-config/CMakeFiles/vdb-config.dir/configure.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-config\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/vdb-config/CMakeFiles/vdb-config.dir/configure.cpp.o -MF CMakeFiles/vdb-config.dir/configure.cpp.o.d -o CMakeFiles/vdb-config.dir/configure.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/configure.cpp
[ 90%] Building C object tools/external/prefetch/CMakeFiles/prefetch.dir/PrfMain.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/prefetch && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/prefetch\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/prefetch/CMakeFiles/prefetch.dir/PrfMain.c.o -MF CMakeFiles/prefetch.dir/PrfMain.c.o.d -o CMakeFiles/prefetch.dir/PrfMain.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/prefetch/PrfMain.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_LOADER.dir/link.d CMakeFiles/Test_LOADER.dir/loadertest.cpp.o -o ../../../test-bin/Test_LOADER  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
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make  -f tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/build.make tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/build.make tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 90%] Building C object tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/spot-assembler.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/spot-assembler.c.o -MF CMakeFiles/latf-load.dir/spot-assembler.c.o.d -o CMakeFiles/latf-load.dir/spot-assembler.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/fastq-loader/spot-assembler.c
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/general-writer/test/test-general-writer.cpp: In function 'void ncbi::runTest(int, const char**, const char*, const char*)':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/general-writer/test/test-general-writer.cpp:271:20: warning: 'gw' may be used uninitialized [-Wmaybe-uninitialized]
  271 |             delete gw;
      |                    ^~
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/general-writer/test/test-general-writer.cpp:217:24: note: 'gw' was declared here
  217 |         GeneralWriter *gw;
      |                        ^~
[ 90%] Building C object tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/common-writer.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/common-writer.c.o -MF CMakeFiles/latf-load.dir/common-writer.c.o.d -o CMakeFiles/latf-load.dir/common-writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/fastq-loader/common-writer.c
[ 90%] Linking CXX executable ../../../test-bin/test-general-writer
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/general-writer/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-general-writer.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/examples && /usr/bin/cmake -E touch /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir/java_compiled_ngs-examples
[ 90%] Linking CXX executable ../../../test-bin/Test_Align_samextract
[ 90%] Building C object tools/external/prefetch/CMakeFiles/prefetch.dir/prefetch.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/align && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Align_samextract.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/prefetch && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/prefetch\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/prefetch/CMakeFiles/prefetch.dir/prefetch.c.o -MF CMakeFiles/prefetch.dir/prefetch.c.o.d -o CMakeFiles/prefetch.dir/prefetch.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/prefetch/prefetch.c
[ 90%] Generating CMakeFiles/ngs-examples.dir/java_class_filelist
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-java/examples && /usr/bin/cmake -DCMAKE_JAVA_CLASS_OUTPUT_PATH=/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir -DCMAKE_JAR_CLASSES_PREFIX= -P /usr/share/cmake-3.31/Modules/UseJava/ClassFilelist.cmake
[ 90%] Creating Java archive ngs-examples.jar
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir && /usr/bin/jar -cf /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib/ngs-examples.jar @java_class_filelist
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-general-writer.dir/link.d "CMakeFiles/test-general-writer.dir/test-general-writer.cpp.o" -o ../../../test-bin/test-general-writer  ../../../ilib/libgeneral-writer.a -Wl,-Bstatic -lktst -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 90%] Built target test-general-writer
make  -f ngs/ngs-sdk/CMakeFiles/ngs-c++.dir/build.make ngs/ngs-sdk/CMakeFiles/ngs-c++.dir/depend
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Align_samextract.dir/link.d "CMakeFiles/Test_Align_samextract.dir/test-samextract.cpp.o" -o ../../../test-bin/Test_Align_samextract  -lsam-extract /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/CMakeFiles/ngs-c++.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 90%] Built target Test_Align_samextract
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-sdk/CMakeFiles/ngs-c++.dir/build.make ngs/ngs-sdk/CMakeFiles/ngs-c++.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-sdk/CMakeFiles/ngs-c++-shared.dir/build.make ngs/ngs-sdk/CMakeFiles/ngs-c++-shared.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/CMakeFiles/ngs-c++-shared.dir/DependInfo.cmake "--color="
[ 90%] Linking CXX static library ../../lib/libngs-c++.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk && /usr/bin/cmake -P CMakeFiles/ngs-c++.dir/cmake_clean_target.cmake
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-sdk/CMakeFiles/ngs-c++-shared.dir/build.make ngs/ngs-sdk/CMakeFiles/ngs-c++-shared.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-c++.dir/link.txt --verbose=1
[ 90%] Linking CXX shared library ../../lib/libngs-c++.so
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-c++-shared.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,--dependency-file=CMakeFiles/ngs-c++-shared.dir/link.d -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libngs-c++.so.3 -o ../../lib/libngs-c++.so.3.0.9 "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadCollection.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceSequence.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Reference.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Pileup.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEventIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEvent.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/AlignmentIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Alignment.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroupIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroup.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Read.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/FragmentIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Fragment.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Statistics.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/StringRef.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReadCollectionItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReferenceItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReferenceSequenceItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PileupItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PileupEventItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/AlignmentItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReadGroupItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReadItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/FragmentItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/StatisticsItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PackageItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/StringItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/Refcount.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/VTable.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ErrBlock.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ErrorMsg.cpp.o" "../ncbi/ngs/CMakeFiles/ngs.dir/NCBI-NGS.c.o" ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_PileupEvent.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Pileup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Alignment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReferenceWindow.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Reference.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/EBI_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_Statistics.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_DB_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroupInfo.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Statistics.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_PileupEvent.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Pileup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadGroup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Alignment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Reference.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Fragment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Cursor.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Refcount.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_String.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Id.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ErrBlock.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlob.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlobIterator.c.o ../ncbi/ngs/CMake/usr/bin/ar qc ../../lib/libngs-c++.a "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadCollection.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceSequence.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Reference.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Pileup.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEventIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEvent.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/AlignmentIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Alignment.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroupIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroup.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Read.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/FragmentIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Fragment.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Statistics.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/StringRef.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReadCollectionItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReferenceItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReferenceSequenceItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PileupItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PileupEventItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/AlignmentItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReadGroupItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReadItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/FragmentItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/StatisticsItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PackageItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/StringItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/Refcount.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/VTable.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ErrBlock.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ErrorMsg.cpp.o" "../ncbi/ngs/CMakeFiles/ngs.dir/NCBI-NGS.c.o" ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_PileupEvent.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Pileup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Alignment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReferenceWindow.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Reference.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/EBI_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_Statistics.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_DB_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroupInfo.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Statistics.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_PileupEvent.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Pileup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadGroup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Alignment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Reference.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Fragment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Cursor.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Refcount.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_String.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Id.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ErrBlock.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlob.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlobIterator.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlob.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlobIterator.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/VByteBlob.c.o "../ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/NCBI-NGS.cpp.o" "../ncbi/ngs-py/CMakeFiles/ngs-py.dir/py_Manager.c.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_Manager.c.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_String.c.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_ErrorMsg.c.o"
/usr/bin/ranlib ../../lib/libngs-c++.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib && rm -f libngs-c++.a.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib && mv libngs-c++.a libngs-c++.a.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib && ln -f -s libngs-c++.a.3.0.9 libngs-c++.a.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib && ln -f -s libngs-c++.a.3 libngs-c++.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib && ln -f -s libngs-c++.a libngs-c++-static.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir && /usr/bin/cmake -D_JAVA_TARGET_DIR=/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib -D_JAVA_TARGET_OUTPUT_NAME=ngs-examples.jar -D_JAVA_TARGET_OUTPUT_LINK= -P /usr/share/cmake-3.31/Modules/UseJava/Symlinks.cmake
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 90%] Built target ngs-c++
make  -f ngs/ngs-sdk/CMakeFiles/ncbi-ngs.dir/build.make ngs/ngs-sdk/CMakeFiles/ncbi-ngs.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/CMakeFiles/ncbi-ngs.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
Files/ngs.dir/NGS_ReferenceBlob.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlobIterator.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/VByteBlob.c.o "../ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/NCBI-NGS.cpp.o" "../ncbi/ngs-py/CMakeFiles/ngs-py.dir/py_Manager.c.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_Manager.c.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_String.c.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_ErrorMsg.c.o"
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk && /usr/bin/cmake -E cmake_symlink_library ../../lib/libngs-c++.so.3.0.9 ../../lib/libngs-c++.so.3 ../../lib/libngs-c++.so
make  -f ngs/ngs-sdk/CMakeFiles/ncbi-ngs.dir/build.make ngs/ngs-sdk/CMakeFiles/ncbi-ngs.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 90%] Built target ngs-examples
make  -f ngs/ngs-sdk/CMakeFiles/ncbi-ngs-shared.dir/build.make ngs/ngs-sdk/CMakeFiles/ncbi-ngs-shared.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/CMakeFiles/ncbi-ngs-shared.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-sdk/CMakeFiles/ncbi-ngs-shared.dir/build.make ngs/ngs-sdk/CMakeFiles/ncbi-ngs-shared.dir/build
[ 91%] Building C object tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/sequence-writer.c.o
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/sequence-writer.c.o -MF CMakeFiles/latf-load.dir/sequence-writer.c.o.d -o CMakeFiles/latf-load.dir/sequence-writer.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/fastq-loader/sequence-writer.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 91%] Linking CXX static library ../../lib/libncbi-ngs.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk && /usr/bin/cmake -P CMakeFiles/ncbi-ngs.dir/cmake_clean_target.cmake
[ 91%] Built target ngs-c++-shared
make  -f tools/external/ngs-pileup/CMakeFiles/ngs-pileup.dir/build.make tools/external/ngs-pileup/CMakeFiles/ngs-pileup.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/ngs-pileup /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/ngs-pileup /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/ngs-pileup/CMakeFiles/ngs-pileup.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk && /usr/bin/cmake -E cmake_link_script CMakeFiles/ncbi-ngs.dir/link.txt --verbose=1
[ 92%] Linking CXX shared library ../../lib/libncbi-ngs.so
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk && /usr/bin/cmake -E cmake_link_script CMakeFiles/ncbi-ngs-shared.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/ngs-pileup/CMakeFiles/ngs-pileup.dir/build.make tools/external/ngs-pileup/CMakeFiles/ngs-pileup.dir/build
/usr/bin/ar qc ../../lib/libncbi-ngs.a "dispatch/CMakeFiles/ngs-disp.dir/ReadCollectionItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReferenceItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReferenceSequenceItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PileupItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PileupEventItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/AlignmentItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReadGroupItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReadItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/FragmentItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/StatisticsItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PackageItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/StringItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/Refcount.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/VTable.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ErrBlock.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ErrorMsg.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_AlignmentItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_AlignmentIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_FragmentItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_FragmentIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_PackageItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_PileupEventItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_PileupEventIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_PileupItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_PileupIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReadCollectionItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReadGroupItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReadGroupIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReadItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReadIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceSequenceItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_StatisticsItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_Refcount.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_StringItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadCollectionItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceSequenceItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupEventIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupEventItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_AlignmentIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_AlignmentItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadGroupIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadGroupItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_FragmentItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_StatisticsItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_Package.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_String.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_Refcount.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ErrorMsg.cpp.o" "../ncbi/ngs/CMakeFiles/ngs.dir/NCBI-NGS.c.o" ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_PileupEvent.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Pileup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Alignment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReferenceWindow.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Reference.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReadCollemake[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/usr/bin/c++ -fPIC -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,--dependency-file=CMakeFiles/ncbi-ngs-shared.dir/link.d -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libncbi-ngs.so.3 -o ../../lib/libncbi-ngs.so.3.0.9 "dispatch/CMakeFiles/ngs-disp.dir/ReadCollectionItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReferenceItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReferenceSequenceItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PileupItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PileupEventItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/AlignmentItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReadGroupItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReadItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/FragmentItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/StatisticsItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PackageItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/StringItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/Refcount.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/VTable.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ErrBlock.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ErrorMsg.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_AlignmentItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_AlignmentIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_FragmentItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_FragmentIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_PackageItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_PileupEventItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_PileupEventIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_PileupItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_PileupIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReadCollectionItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReadGroupItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReadGroupIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReadItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReadIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceSequenceItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_StatisticsItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_Refcount.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_StringItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadCollectionItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceSequenceItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupEventIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupEventItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_AlignmentIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_AlignmentItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadGroupIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadGroupItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_FragmentItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_StatisticsItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_Package.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_String.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_Refcount.cpp.o" "langua[ 92%] Building CXX object tools/external/ngs-pileup/CMakeFiles/ngs-pileup.dir/ngs-pileup.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/ngs-pileup && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/ngs-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/ngs-pileup/CMakeFiles/ngs-pileup.dir/ngs-pileup.cpp.o -MF CMakeFiles/ngs-pileup.dir/ngs-pileup.cpp.o.d -o CMakeFiles/ngs-pileup.dir/ngs-pileup.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/ngs-pileup/ngs-pileup.cpp
ction.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/EBI_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_Statistics.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_DB_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroupInfo.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Statistics.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_PileupEvent.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Pileup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadGroup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Alignment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Reference.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Fragment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Cursor.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Refcount.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_String.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Id.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ErrBlock.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlob.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlobIterator.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlob.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlobIterator.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/VByteBlob.c.o "../ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/NCBI-NGS.cpp.o" "../ncbi/ngs-py/CMakeFiles/ngs-py.dir/py_Manager.c.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadCollection.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceSequence.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Reference.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Pileup.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEventIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEvent.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/AlignmentIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Alignment.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroupIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroup.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Read.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/FragmentIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Fragment.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Statistics.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/StringRef.cpp.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_Manager.c.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_String.c.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_ErrorMsg.c.o"
/usr/bin/ranlib ../../lib/libncbi-ngs.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib && rm -f libncbi-ngs.a.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib && mv libncbi-ngs.a libncbi-ngs.a.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib && ln -f -s libncbi-ngs.a.3.0.9 libncbi-ngs.a.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib && ln -f -s libncbi-ngs.a.3 libncbi-ngs.a
[ 92%] Building C object tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/common-reader.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/common-reader.c.o -MF CMakeFiles/latf-load.dir/common-reader.c.o.d -o CMakeFiles/latf-load.dir/common-reader.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/fastq-loader/common-reader.c
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib && ln -f -s libncbi-ngs.a libncbi-ngs-static.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 92%] Built target ncbi-ngs
ge/java/CMakeFiles/ngs-bind-java.dir/jni_ErrorMsg.cpp.o" "../ncbi/ngs/CMakeFiles/ngs.dir/NCBI-NGS.c.o" ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_PileupEvent.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Pileup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Alignment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReferenceWindow.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Reference.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/EBI_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_Statistics.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_DB_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroupInfo.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Statistics.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_PileupEvent.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Pileup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadGroup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Alignment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Reference.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Fragment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Cursor.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Refcount.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_String.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Id.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ErrBlock.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlob.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlobIterator.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlob.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlobIterator.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/VByteBlob.c.o "../ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/NCBI-NGS.cpp.o" "../ncbi/ngs-py/CMakeFiles/ngs-py.dir/py_Manager.c.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadCollection.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceSequence.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Reference.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Pileup.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEventIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEvent.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/AlignmentIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Alignment.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroupIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroup.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Read.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/FragmentIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Fragment.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Statistics.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/StringRef.cpp.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_Manager.c.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_String.c.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_ErrorMsg.c.o"  /usr/lib/aarch64-linux-gnu/libkapp.a ../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk && /usr/bin/cmake -E cmake_symlink_library ../../lib/libncbi-ngs.so.3.0.9 ../../lib/libncbi-ngs.so.3 ../../lib/libncbi-ngs.so
make  -f test/external/ngs-pileup/CMakeFiles/Test_Ngs_Pileup.dir/build.make test/external/ngs-pileup/CMakeFiles/Test_Ngs_Pileup.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/ngs-pileup /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/ngs-pileup /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/ngs-pileup/CMakeFiles/Test_Ngs_Pileup.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/ngs-pileup/CMakeFiles/Test_Ngs_Pileup.dir/build.make test/external/ngs-pileup/CMakeFiles/Test_Ngs_Pileup.dir/build
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 92%] Building CXX object test/external/ngs-pileup/CMakeFiles/Test_Ngs_Pileup.dir/test-ngs-pileup.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/ngs-pileup && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/ngs-pileup/CMakeFiles/Test_Ngs_Pileup.dir/test-ngs-pileup.cpp.o -MF CMakeFiles/Test_Ngs_Pileup.dir/test-ngs-pileup.cpp.o.d -o CMakeFiles/Test_Ngs_Pileup.dir/test-ngs-pileup.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/ngs-pileup/test-ngs-pileup.cpp
[ 92%] Built target ncbi-ngs-shared
make  -f test/internal/align/CMakeFiles/SlowTest_Align_estimator.dir/build.make test/internal/align/CMakeFiles/SlowTest_Align_estimator.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/align /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/align /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/align/CMakeFiles/SlowTest_Align_estimator.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/internal/align/CMakeFiles/SlowTest_Align_estimator.dir/build.make test/internal/align/CMakeFiles/SlowTest_Align_estimator.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 92%] Building CXX object test/internal/align/CMakeFiles/SlowTest_Align_estimator.dir/pileup_estimator.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/align && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/internal/align\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/usr/include/ncbi-vdb/ext -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/../ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/internal/align/CMakeFiles/SlowTest_Align_estimator.dir/pileup_estimator.cpp.o -MF CMakeFiles/SlowTest_Align_estimator.dir/pileup_estimator.cpp.o.d -o CMakeFiles/SlowTest_Align_estimator.dir/pileup_estimator.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/align/pileup_estimator.cpp
[ 92%] Building C object tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/fastq-reader.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/fastq-reader.c.o -MF CMakeFiles/latf-load.dir/fastq-reader.c.o.d -o CMakeFiles/latf-load.dir/fastq-reader.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/fastq-loader/fastq-reader.c
[ 92%] Building CXX object tools/external/vdb-config/CMakeFiles/vdb-config.dir/util.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-config\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/vdb-config/CMakeFiles/vdb-config.dir/util.cpp.o -MF CMakeFiles/vdb-config.dir/util.cpp.o.d -o CMakeFiles/vdb-config.dir/util.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/util.cpp
[ 92%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/command-line.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/command-line.cpp.o -MF CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/command-line.cpp.o.d -o CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/command-line.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/command-line.cpp
[ 92%] Building C object tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/zz_fastq-grammar.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/zz_fastq-grammar.c.o -MF CMakeFiles/latf-load.dir/zz_fastq-grammar.c.o.d -o CMakeFiles/latf-load.dir/zz_fastq-grammar.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/fastq-loader/zz_fastq-grammar.c
[ 92%] Building C object tools/external/prefetch/CMakeFiles/prefetch.dir/PrfRetrier.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/prefetch && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/prefetch\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/prefetch/CMakeFiles/prefetch.dir/PrfRetrier.c.o -MF CMakeFiles/prefetch.dir/PrfRetrier.c.o.d -o CMakeFiles/prefetch.dir/PrfRetrier.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/prefetch/PrfRetrier.c
[ 92%] Building CXX object tools/external/ngs-pileup/CMakeFiles/ngs-pileup.dir/main.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/ngs-pileup && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/ngs-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/ngs-pileup/CMakeFiles/ngs-pileup.dir/main.cpp.o -MF CMakeFiles/ngs-pileup.dir/main.cpp.o.d -o CMakeFiles/ngs-pileup.dir/main.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/ngs-pileup/main.cpp
[ 92%] Building C object tools/external/prefetch/CMakeFiles/prefetch.dir/PrfOutFile.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/prefetch && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/prefetch\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/prefetch/CMakeFiles/prefetch.dir/PrfOutFile.c.o -MF CMakeFiles/prefetch.dir/PrfOutFile.c.o.d -o CMakeFiles/prefetch.dir/PrfOutFile.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/prefetch/PrfOutFile.c
[ 92%] Building C object tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/zz_fastq-lex.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -Wno-misleading-indentation -MD -MT tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/zz_fastq-lex.c.o -MF CMakeFiles/latf-load.dir/zz_fastq-lex.c.o.d -o CMakeFiles/latf-load.dir/zz_fastq-lex.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/fastq-loader/zz_fastq-lex.c
[ 93%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/SDL-response.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/SDL-response.cpp.o -MF CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/SDL-response.cpp.o.d -o CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/SDL-response.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/SDL-response.cpp
[ 93%] Linking C executable ../../../bin/prefetch
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/prefetch && /usr/bin/cmake -E cmake_link_script CMakeFiles/prefetch.dir/link.txt --verbose=1
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/prefetch.dir/link.d "CMakeFiles/prefetch.dir/kfile-no-q.c.o" CMakeFiles/prefetch.dir/PrfMain.c.o CMakeFiles/prefetch.dir/prefetch.c.o CMakeFiles/prefetch.dir/PrfRetrier.c.o CMakeFiles/prefetch.dir/PrfOutFile.c.o -o ../../../bin/prefetch  ../../../ilib/libascp.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f prefetch.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv prefetch prefetch.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s prefetch.3.0.9 prefetch.3
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[ 93%] Built target prefetch
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/examples /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples/CMakeFiles/FragTest.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
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[ 93%] Building CXX object ngs/ngs-sdk/examples/CMakeFiles/FragTest.dir/FragTest.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT ngs/ngs-sdk/examples/CMakeFiles/FragTest.dir/FragTest.cpp.o -MF CMakeFiles/FragTest.dir/FragTest.cpp.o.d -o CMakeFiles/FragTest.dir/FragTest.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/examples/FragTest.cpp
[ 93%] Building C object tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/id2name.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/id2name.c.o -MF CMakeFiles/latf-load.dir/id2name.c.o.d -o CMakeFiles/latf-load.dir/id2name.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/fastq-loader/id2name.c
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[ 93%] Building C object tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/fastq-loader.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/fastq-loader.c.o -MF CMakeFiles/latf-load.dir/fastq-loader.c.o.d -o CMakeFiles/latf-load.dir/fastq-loader.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/fastq-loader/fastq-loader.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/ngs-pileup.dir/link.d "CMakeFiles/ngs-pileup.dir/ngs-pileup.cpp.o" "CMakeFiles/ngs-pileup.dir/main.cpp.o" -o ../../../bin/ngs-pileup  ../../../lib/libncbi-ngs-c++.a ../../../lib/libngs-c++.a ../../../ilib/libngs.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f ngs-pileup.3.0.9
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[ 93%] Building CXX object ngs/ngs-sdk/examples/CMakeFiles/AlignTest.dir/AlignTest.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT ngs/ngs-sdk/examples/CMakeFiles/AlignTest.dir/AlignTest.cpp.o -MF CMakeFiles/AlignTest.dir/AlignTest.cpp.o.d -o CMakeFiles/AlignTest.dir/AlignTest.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/examples/AlignTest.cpp
[ 93%] Building C object tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/loader-imp.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/loader-imp.c.o -MF CMakeFiles/latf-load.dir/loader-imp.c.o.d -o CMakeFiles/latf-load.dir/loader-imp.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/fastq-loader/loader-imp.c
[ 93%] Linking CXX executable ../../../test-bin/FragTest
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/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/fastq-loader/loader-imp.c: In function 'WriteLoaderSignature':
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  180 |         rc = KLoaderMeta_Write(node, progName, __DATE__, "FASTQ", KAppVersion());
      |                                                ^~~~~~~~
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/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/FragTest.dir/link.d CMakeFiles/FragTest.dir/FragTest.cpp.o -o ../../../test-bin/FragTest  ../../../lib/libncbi-ngs.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 93%] Building CXX object ngs/ngs-sdk/examples/CMakeFiles/AlignSliceTest.dir/AlignSliceTest.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT ngs/ngs-sdk/examples/CMakeFiles/AlignSliceTest.dir/AlignSliceTest.cpp.o -MF CMakeFiles/AlignSliceTest.dir/AlignSliceTest.cpp.o.d -o CMakeFiles/AlignSliceTest.dir/AlignSliceTest.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/examples/AlignSliceTest.cpp
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/latf-load.dir/link.d "CMakeFiles/latf-load.dir/spot-assembler.c.o" "CMakeFiles/latf-load.dir/common-writer.c.o" "CMakeFiles/latf-load.dir/sequence-writer.c.o" "CMakeFiles/latf-load.dir/common-reader.c.o" "CMakeFiles/latf-load.dir/fastq-reader.c.o" "CMakeFiles/latf-load.dir/zz_fastq-grammar.c.o" "CMakeFiles/latf-load.dir/zz_fastq-lex.c.o" "CMakeFiles/latf-load.dir/id2name.c.o" "CMakeFiles/latf-load.dir/fastq-loader.c.o" "CMakeFiles/latf-load.dir/loader-imp.c.o" -o ../../../bin/latf-load  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f latf-load.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv latf-load latf-load.3.0.9
[ 93%] Linking CXX executable ../../../test-bin/AlignTest
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/AlignTest.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s latf-load.3.0.9 latf-load.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s latf-load.3 latf-load
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 93%] Built target latf-load
make  -f ngs/ngs-sdk/examples/CMakeFiles/PileupTest.dir/build.make ngs/ngs-sdk/examples/CMakeFiles/PileupTest.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/examples /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples/CMakeFiles/PileupTest.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-sdk/examples/CMakeFiles/PileupTest.dir/build.make ngs/ngs-sdk/examples/CMakeFiles/PileupTest.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 93%] Linking CXX executable ../../bin/gw-dumper
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/general-writer && /usr/bin/cmake -E cmake_link_script CMakeFiles/gw-dumper.dir/link.txt --verbose=1
[ 94%] Building CXX object ngs/ngs-sdk/examples/CMakeFiles/PileupTest.dir/PileupTest.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT ngs/ngs-sdk/examples/CMakeFiles/PileupTest.dir/PileupTest.cpp.o -MF CMakeFiles/PileupTest.dir/PileupTest.cpp.o.d -o CMakeFiles/PileupTest.dir/PileupTest.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/examples/PileupTest.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/gw-dumper.dir/link.d "CMakeFiles/gw-dumper.dir/gw-dumper.cpp.o" -o ../../bin/gw-dumper  ../../ilib/libgeneral-writer.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
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/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/AlignTest.dir/link.d CMakeFiles/AlignTest.dir/AlignTest.cpp.o -o ../../../test-bin/AlignTest  ../../../lib/libncbi-ngs.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 94%] Built target gw-dumper
[ 94%] Built target AlignTest
make  -f ngs/ngs-sdk/examples/CMakeFiles/RefTest.dir/build.make ngs/ngs-sdk/examples/CMakeFiles/RefTest.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/examples /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples/CMakeFiles/RefTest.dir/DependInfo.cmake "--color="
[ 94%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/file-path.posix.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/file-path.posix.cpp.o -MF CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/file-path.posix.cpp.o.d -o CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/file-path.posix.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/file-path.posix.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-sdk/examples/CMakeFiles/RefTest.dir/build.make ngs/ngs-sdk/examples/CMakeFiles/RefTest.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 94%] Building CXX object ngs/ngs-sdk/examples/CMakeFiles/RefTest.dir/RefTest.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT ngs/ngs-sdk/examples/CMakeFiles/RefTest.dir/RefTest.cpp.o -MF CMakeFiles/RefTest.dir/RefTest.cpp.o.d -o CMakeFiles/RefTest.dir/RefTest.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/examples/RefTest.cpp
[ 94%] Linking CXX executable ../../../test-bin/AlignSliceTest
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/AlignSliceTest.dir/link.txt --verbose=1
[ 94%] Linking CXX executable ../../../test-bin/Test_Ngs_Pileup
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/ngs-pileup && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Ngs_Pileup.dir/link.txt --verbose=1
[ 94%] Building C object tools/external/vdb-config/CMakeFiles/vdb-config.dir/vdb-config.c.o
[ 94%] Linking CXX executable ../../../test-bin/PileupTest
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/PileupTest.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-config\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/CMakeFiles/vdb-config.dir/vdb-config.c.o -MF CMakeFiles/vdb-config.dir/vdb-config.c.o.d -o CMakeFiles/vdb-config.dir/vdb-config.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/vdb-config.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/AlignSliceTest.dir/link.d CMakeFiles/AlignSliceTest.dir/AlignSliceTest.cpp.o -o ../../../test-bin/AlignSliceTest  ../../../lib/libncbi-ngs.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 94%] Built target AlignSliceTest
make  -f ngs/ngs-sdk/examples/CMakeFiles/DumpReferenceFASTA.dir/build.make ngs/ngs-sdk/examples/CMakeFiles/DumpReferenceFASTA.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/examples /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples/CMakeFiles/DumpReferenceFASTA.dir/DependInfo.cmake "--color="
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Ngs_Pileup.dir/link.d "CMakeFiles/Test_Ngs_Pileup.dir/test-ngs-pileup.cpp.o" -o ../../../test-bin/Test_Ngs_Pileup  ../../../lib/libncbi-ngs-c++.a ../../../lib/libngs-c++.a ../../../ilib/libngs.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
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make  -f ngs/ngs-sdk/examples/CMakeFiles/DumpReferenceFASTA.dir/build.make ngs/ngs-sdk/examples/CMakeFiles/DumpReferenceFASTA.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 94%] Built target Test_Ngs_Pileup
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs.dir/depend
[ 94%] Building CXX object ngs/ngs-sdk/examples/CMakeFiles/DumpReferenceFASTA.dir/DumpReferenceFASTA.cpp.o
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT ngs/ngs-sdk/examples/CMakeFiles/DumpReferenceFASTA.dir/DumpReferenceFASTA.cpp.o -MF CMakeFiles/DumpReferenceFASTA.dir/DumpReferenceFASTA.cpp.o.d -o CMakeFiles/DumpReferenceFASTA.dir/DumpReferenceFASTA.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk/examples/DumpReferenceFASTA.cpp
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[ 94%] Linking CXX executable ../../../test-bin/RefTest
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/RefTest.dir/link.txt --verbose=1
[ 94%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs.dir/ngstest.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs.dir/ngstest.cpp.o -MF CMakeFiles/test-ngs.dir/ngstest.cpp.o.d -o CMakeFiles/test-ngs.dir/ngstest.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest.cpp
[ 94%] Linking CXX executable ../../../test-bin/SlowTest_Align_estimator
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/internal/align && /usr/bin/cmake -E cmake_link_script CMakeFiles/SlowTest_Align_estimator.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/PileupTest.dir/link.d CMakeFiles/PileupTest.dir/PileupTest.cpp.o -o ../../../test-bin/PileupTest  ../../../lib/libncbi-ngs.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 94%] Built target PileupTest
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_sra.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_sra.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs_sra.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_sra.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_sra.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 94%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_sra.dir/ngstest_sra.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_sra.dir/ngstest_sra.cpp.o -MF CMakeFiles/test-ngs_sra.dir/ngstest_sra.cpp.o.d -o CMakeFiles/test-ngs_sra.dir/ngstest_sra.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest_sra.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/RefTest.dir/link.d CMakeFiles/RefTest.dir/RefTest.cpp.o -o ../../../test-bin/RefTest  ../../../lib/libncbi-ngs.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 94%] Built target RefTest
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb.dir/DependInfo.cmake "--color="
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/SlowTest_Align_estimator.dir/link.d CMakeFiles/SlowTest_Align_estimator.dir/pileup_estimator.cpp.o -o ../../../test-bin/SlowTest_Align_estimator  ../../../lib/libncbi-ngs-c++.a ../../../lib/libngs-c++.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm ../../../ilib/libngs.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 94%] Built target SlowTest_Align_estimator
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1.dir/DependInfo.cmake "--color="
[ 94%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb.dir/ngstest_sradb.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb.dir/ngstest_sradb.cpp.o -MF CMakeFiles/test-ngs_sradb.dir/ngstest_sradb.cpp.o.d -o CMakeFiles/test-ngs_sradb.dir/ngstest_sradb.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest_sradb.cpp
[ 94%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/json-parse.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/json-parse.cpp.o -MF CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/json-parse.cpp.o.d -o CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/json-parse.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/json-parse.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 94%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1.dir/ngstest_csra1.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1.dir/ngstest_csra1.cpp.o -MF CMakeFiles/test-ngs_csra1.dir/ngstest_csra1.cpp.o.d -o CMakeFiles/test-ngs_csra1.dir/ngstest_csra1.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest_csra1.cpp
[ 94%] Linking CXX executable ../../../test-bin/test-ngs
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs.dir/link.txt --verbose=1
[ 94%] Linking CXX executable ../../../test-bin/DumpReferenceFASTA
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/DumpReferenceFASTA.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs.dir/link.d "CMakeFiles/test-ngs.dir/ngstest.cpp.o" -o ../../../test-bin/test-ngs  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 94%] Built target test-ngs
[ 95%] Building CXX object tools/external/vdb-config/CMakeFiles/vdb-config.dir/interactive2.cpp.o
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/DumpReferenceFASTA.dir/link.d CMakeFiles/DumpReferenceFASTA.dir/DumpReferenceFASTA.cpp.o -o ../../../test-bin/DumpReferenceFASTA  ../../../lib/libncbi-ngs.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-config\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/vdb-config/CMakeFiles/vdb-config.dir/interactive2.cpp.o -MF CMakeFiles/vdb-config.dir/interactive2.cpp.o.d -o CMakeFiles/vdb-config.dir/interactive2.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/interactive2.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 95%] Built target DumpReferenceFASTA
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_readcollection.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_readcollection.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_readcollection.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_readcollection.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_readcollection.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 95%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_readcollection.dir/ngstest_csra1_readcollection.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_readcollection.dir/ngstest_csra1_readcollection.cpp.o -MF CMakeFiles/test-ngs_csra1_readcollection.dir/ngstest_csra1_readcollection.cpp.o.d -o CMakeFiles/test-ngs_csra1_readcollection.dir/ngstest_csra1_readcollection.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest_csra1_readcollection.cpp
[ 95%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/build-version.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/build-version.cpp.o -MF CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/build-version.cpp.o.d -o CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/build-version.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/build-version.cpp
[ 95%] Building CXX object tools/external/vdb-config/CMakeFiles/vdb-config.dir/vdb-config-model.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/vdb-config\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/vdb-config/CMakeFiles/vdb-config.dir/vdb-config-model.cpp.o -MF CMakeFiles/vdb-config.dir/vdb-config-model.cpp.o.d -o CMakeFiles/vdb-config.dir/vdb-config-model.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/vdb-config/vdb-config-model.cpp
[ 95%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/tool-args.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/tool-args.cpp.o -MF CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/tool-args.cpp.o.d -o CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/tool-args.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/driver-tool/tool-args.cpp
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_refwin.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_refwin.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_refwin.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 95%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_refwin.dir/ngstest_csra1_refwin.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_refwin.dir/ngstest_csra1_refwin.cpp.o -MF CMakeFiles/test-ngs_csra1_refwin.dir/ngstest_csra1_refwin.cpp.o.d -o CMakeFiles/test-ngs_csra1_refwin.dir/ngstest_csra1_refwin.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp: In member function 'void CSRA1_NGS_ReferenceWindow_Slice_Filtered::Instance::test_method()':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp:591:196: note: '#pragma message: filtering did not work prior to today's changes. I have set filter bits to allow this test to pass. the test should be fixed so that filters are set to the two desired flags.'
  591 | #pragma message ( "filtering did not work prior to today's changes. I have set filter bits to allow this test to pass. the test should be fixed so that filters are set to the two desired flags." )
      |                                                                                                                                                                                                    ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp: In member function 'void CSRA1_NGS_ReferenceGetFilteredAlignmentSlice_Wraparound::Instance::test_method()':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp:669:196: note: '#pragma message: filtering did not work prior to today's changes. I have set filter bits to allow this test to pass. the test should be fixed so that filters are set to the two desired flags.'
  669 | #pragma message ( "filtering did not work prior to today's changes. I have set filter bits to allow this test to pass. the test should be fixed so that filters are set to the two desired flags." )
      |                                                                                                                                                                                                    ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp: In member function 'void CSRA1_NGS_ReferenceGetFilteredAlignmentSlice_Wraparound_StartInWindow::Instance::test_method()':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp:696:196: note: '#pragma message: filtering did not work prior to today's changes. I have set filter bits to allow this test to pass. the test should be fixed so that filters are set to the two desired flags.'
  696 | #pragma message ( "filtering did not work prior to today's changes. I have set filter bits to allow this test to pass. the test should be fixed so that filters are set to the two desired flags." )
      |                                                                                                                                                                                                    ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp: In member function 'void CSRA1_NGS_ReferenceGetFilteredAlignmentSlice_NoWraparound::Instance::test_method()':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp:719:196: note: '#pragma message: filtering did not work prior to today's changes. I have set filter bits to allow this test to pass. the test should be fixed so that filters are set to the two desired flags.'
  719 | #pragma message ( "filtering did not work prior to today's changes. I have set filter bits to allow this test to pass. the test should be fixed so that filters are set to the two desired flags." )
      |                                                                                                                                                                                                    ^
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp: In member function 'void CSRA1_NGS_ReferenceGetFilteredAlignmentSlice_NoWraparound_StartInWindow::Instance::test_method()':
/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp:740:196: note: '#pragma message: filtering did not work prior to today's changes. I have set filter bits to allow this test to pass. the test should be fixed so that filters are set to the two desired flags.'
  740 | #pragma message ( "filtering did not work prior to today's changes. I have set filter bits to allow this test to pass. the test should be fixed so that filters are set to the two desired flags." )
      |                                                                                                                                                                                                    ^
[ 95%] Linking CXX executable ../../../test-bin/Test_SraInfo_Unit
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/sra-info && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_SraInfo_Unit.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_SraInfo_Unit.dir/link.d "CMakeFiles/Test_SraInfo_Unit.dir/test-sra-info.cpp.o" -o ../../../test-bin/Test_SraInfo_Unit  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 95%] Linking CXX executable ../../../bin/vdb-config
[ 95%] Built target Test_SraInfo_Unit
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-config.dir/link.txt --verbose=1
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_pileup.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_pileup.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_pileup.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 96%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_pileup.dir/ngstest_csra1_pileup.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_pileup.dir/ngstest_csra1_pileup.cpp.o -MF CMakeFiles/test-ngs_csra1_pileup.dir/ngstest_csra1_pileup.cpp.o.d -o CMakeFiles/test-ngs_csra1_pileup.dir/ngstest_csra1_pileup.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest_csra1_pileup.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-config.dir/link.d "CMakeFiles/vdb-config.dir/configure.cpp.o" "CMakeFiles/vdb-config.dir/util.cpp.o" "CMakeFiles/vdb-config.dir/vdb-config.c.o" "CMakeFiles/vdb-config.dir/interactive2.cpp.o" "CMakeFiles/vdb-config.dir/vdb-config-model.cpp.o" -o ../../../bin/vdb-config  ../../../ilib/libtui_cpp.a ../../../ilib/libtui.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f vdb-config.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv vdb-config vdb-config.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-config.3.0.9 vdb-config.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-config.3 vdb-config
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config && /usr/bin/cmake -E copy /usr/include/ncbi-vdb/kfg/ncbi/default.kfg /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/ncbi/default.kfg
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_reference.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_reference.dir/depend
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
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cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs_reference.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 96%] Built target vdb-config
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_reference.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_reference.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 96%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_reference.dir/ngstest_reference.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-fragmentblob.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_reference.dir/ngstest_reference.cpp.o -MF CMakeFiles/test-ngs_reference.dir/ngstest_reference.cpp.o.d -o CMakeFiles/test-ngs_reference.dir/ngstest_reference.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest_reference.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-fragmentblob.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-fragmentblob.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 96%] Linking CXX executable ../../../test-bin/Test_Drivertool_RunSource
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Drivertool_RunSource.dir/link.txt --verbose=1
[ 96%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-fragmentblob.dir/ngstest_fragmentblob.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-fragmentblob.dir/ngstest_fragmentblob.cpp.o -MF CMakeFiles/test-fragmentblob.dir/ngstest_fragmentblob.cpp.o.d -o CMakeFiles/test-fragmentblob.dir/ngstest_fragmentblob.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest_fragmentblob.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Drivertool_RunSource.dir/link.d "CMakeFiles/Test_Drivertool_RunSource.dir/test-run-source.cpp.o" "CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/run-source.cpp.o" "CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/command-line.cpp.o" "CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/SDL-response.cpp.o" "CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/file-path.posix.cpp.o" "CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/json-parse.cpp.o" "CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/build-version.cpp.o" "CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/tool-args.cpp.o" -o ../../../test-bin/Test_Drivertool_RunSource  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 96%] Built target Test_Drivertool_RunSource
make  -f libs/ngs-vdb/test/CMakeFiles/test-referenceblob.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-referenceblob.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-referenceblob.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-referenceblob.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-referenceblob.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 96%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-referenceblob.dir/ngstest_referenceblob.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-referenceblob.dir/ngstest_referenceblob.cpp.o -MF CMakeFiles/test-referenceblob.dir/ngstest_referenceblob.cpp.o.d -o CMakeFiles/test-referenceblob.dir/ngstest_referenceblob.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest_referenceblob.cpp
[ 96%] Linking CXX executable ../../../test-bin/test-fragmentblob
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fragmentblob.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-fragmentblob.dir/link.d "CMakeFiles/test-fragmentblob.dir/ngstest_fragmentblob.cpp.o" -o ../../../test-bin/test-fragmentblob  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 96%] Built target test-fragmentblob
make  -f libs/ngs-vdb/test/CMakeFiles/test-byteblob.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-byteblob.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-byteblob.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-byteblob.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-byteblob.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 96%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-byteblob.dir/ngstest_byteblob.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-byteblob.dir/ngstest_byteblob.cpp.o -MF CMakeFiles/test-byteblob.dir/ngstest_byteblob.cpp.o.d -o CMakeFiles/test-byteblob.dir/ngstest_byteblob.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/ngstest_byteblob.cpp
[ 96%] Linking CXX executable ../../../test-bin/test-ngs_csra1_refwin
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_csra1_refwin.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_csra1_refwin.dir/link.d "CMakeFiles/test-ngs_csra1_refwin.dir/ngstest_csra1_refwin.cpp.o" -o ../../../test-bin/test-ngs_csra1_refwin  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 96%] Built target test-ngs_csra1_refwin
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_sra_c++.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_sra_c++.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs_sra_c++.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_sra_c++.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_sra_c++.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 96%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_sra_c++.dir/SRAtest.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_sra_c++.dir/SRAtest.cpp.o -MF CMakeFiles/test-ngs_sra_c++.dir/SRAtest.cpp.o.d -o CMakeFiles/test-ngs_sra_c++.dir/SRAtest.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/SRAtest.cpp
[ 96%] Linking CXX executable ../../../test-bin/test-ngs_sradb
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_sradb.dir/link.txt --verbose=1
[ 96%] Linking CXX executable ../../../test-bin/test-ngs_csra1_pileup
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_csra1_pileup.dir/link.txt --verbose=1
[ 96%] Linking C static library ../../ilib/libvdb-sqlite.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/vdb-sqlite && /usr/bin/cmake -P CMakeFiles/vdb-sqlite.dir/cmake_clean_target.cmake
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/vdb-sqlite && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-sqlite.dir/link.txt --verbose=1
/usr/bin/ar qc ../../ilib/libvdb-sqlite.a "CMakeFiles/vdb-sqlite.dir/sqlite3.c.o" "CMakeFiles/vdb-sqlite.dir/sqlite3vdb.c.o"
/usr/bin/ranlib ../../ilib/libvdb-sqlite.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_sradb.dir/link.d "CMakeFiles/test-ngs_sradb.dir/ngstest_sradb.cpp.o" -o ../../../test-bin/test-ngs_sradb  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 96%] Built target vdb-sqlite
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb_c++.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb_c++.dir/depend
[ 96%] Built target test-ngs_sradb
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_c++.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_c++.dir/depend
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb_c++.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_c++.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb_c++.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb_c++.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_c++.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_c++.dir/build
[ 96%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb_c++.dir/SRADBtest.cpp.o
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb_c++.dir/SRADBtest.cpp.o -MF CMakeFiles/test-ngs_sradb_c++.dir/SRADBtest.cpp.o.d -o CMakeFiles/test-ngs_sradb_c++.dir/SRADBtest.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/SRADBtest.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_csra1_pileup.dir/link.d "CMakeFiles/test-ngs_csra1_pileup.dir/ngstest_csra1_pileup.cpp.o" -o ../../../test-bin/test-ngs_csra1_pileup  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 96%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_c++.dir/CSRA1test.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_c++.dir/CSRA1test.cpp.o -MF CMakeFiles/test-ngs_csra1_c++.dir/CSRA1test.cpp.o.d -o CMakeFiles/test-ngs_csra1_c++.dir/CSRA1test.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/CSRA1test.cpp
[ 96%] Built target test-ngs_csra1_pileup
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1pileup++.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1pileup++.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1pileup++.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1pileup++.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1pileup++.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 96%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1pileup++.dir/CSRA1PileupTest.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1pileup++.dir/CSRA1PileupTest.cpp.o -MF CMakeFiles/test-ngs_csra1pileup++.dir/CSRA1PileupTest.cpp.o.d -o CMakeFiles/test-ngs_csra1pileup++.dir/CSRA1PileupTest.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/CSRA1PileupTest.cpp
[ 96%] Linking CXX executable ../../../test-bin/test-referenceblob
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-referenceblob.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-referenceblob.dir/link.d "CMakeFiles/test-referenceblob.dir/ngstest_referenceblob.cpp.o" -o ../../../test-bin/test-referenceblob  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 96%] Built target test-referenceblob
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs-vdb.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs-vdb.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs-vdb.dir/DependInfo.cmake "--color="
[ 96%] Linking CXX executable ../../../test-bin/test-ngs_csra1_readcollection
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_csra1_readcollection.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs-vdb.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs-vdb.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 96%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs-vdb.dir/test-ngs-vdb.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs-vdb.dir/test-ngs-vdb.cpp.o -MF CMakeFiles/test-ngs-vdb.dir/test-ngs-vdb.cpp.o.d -o CMakeFiles/test-ngs-vdb.dir/test-ngs-vdb.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/test-ngs-vdb.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_csra1_readcollection.dir/link.d "CMakeFiles/test-ngs_csra1_readcollection.dir/ngstest_csra1_readcollection.cpp.o" -o ../../../test-bin/test-ngs_csra1_readcollection  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 96%] Built target test-ngs_csra1_readcollection
make  -f tools/external/ref-variation/CMakeFiles/ref-variation.dir/build.make tools/external/ref-variation/CMakeFiles/ref-variation.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/ref-variation /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation/CMakeFiles/ref-variation.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/ref-variation/CMakeFiles/ref-variation.dir/build.make tools/external/ref-variation/CMakeFiles/ref-variation.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Linking CXX executable ../../../test-bin/test-ngs_reference
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_reference.dir/link.txt --verbose=1
[ 97%] Building CXX object tools/external/ref-variation/CMakeFiles/ref-variation.dir/common.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/ref-variation\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/ref-variation/CMakeFiles/ref-variation.dir/common.cpp.o -MF CMakeFiles/ref-variation.dir/common.cpp.o.d -o CMakeFiles/ref-variation.dir/common.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/ref-variation/common.cpp
[ 97%] Linking CXX executable ../../../test-bin/test-byteblob
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-byteblob.dir/link.txt --verbose=1
[ 97%] Building CXX object tools/external/ref-variation/CMakeFiles/ref-variation.dir/helper.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/ref-variation\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/ref-variation/CMakeFiles/ref-variation.dir/helper.cpp.o -MF CMakeFiles/ref-variation.dir/helper.cpp.o.d -o CMakeFiles/ref-variation.dir/helper.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/ref-variation/helper.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_reference.dir/link.d "CMakeFiles/test-ngs_reference.dir/ngstest_reference.cpp.o" -o ../../../test-bin/test-ngs_reference  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Built target test-ngs_reference
make  -f tools/external/ref-variation/CMakeFiles/var-expand.dir/build.make tools/external/ref-variation/CMakeFiles/var-expand.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/ref-variation /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation/CMakeFiles/var-expand.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/ref-variation/CMakeFiles/var-expand.dir/build.make tools/external/ref-variation/CMakeFiles/var-expand.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-byteblob.dir/link.d "CMakeFiles/test-byteblob.dir/ngstest_byteblob.cpp.o" -o ../../../test-bin/test-byteblob  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
[ 97%] Building CXX object tools/external/ref-variation/CMakeFiles/var-expand.dir/common.cpp.o
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/var-expand\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/ref-variation/CMakeFiles/var-expand.dir/common.cpp.o -MF CMakeFiles/var-expand.dir/common.cpp.o.d -o CMakeFiles/var-expand.dir/common.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/ref-variation/common.cpp
[ 97%] Built target test-byteblob
make  -f tools/external/sra-search/CMakeFiles/sra-search.dir/build.make tools/external/sra-search/CMakeFiles/sra-search.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/CMakeFiles/sra-search.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/sra-search/CMakeFiles/sra-search.dir/build.make tools/external/sra-search/CMakeFiles/sra-search.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Building CXX object tools/external/sra-search/CMakeFiles/sra-search.dir/main.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-search/CMakeFiles/sra-search.dir/main.cpp.o -MF CMakeFiles/sra-search.dir/main.cpp.o.d -o CMakeFiles/sra-search.dir/main.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/main.cpp
[ 97%] Building CXX object tools/external/ref-variation/CMakeFiles/var-expand.dir/helper.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/var-expand\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/ref-variation/CMakeFiles/var-expand.dir/helper.cpp.o -MF CMakeFiles/var-expand.dir/helper.cpp.o.d -o CMakeFiles/var-expand.dir/helper.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/ref-variation/helper.cpp
[ 97%] Linking CXX executable ../../../test-bin/test-ngs_csra1
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_csra1.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_csra1.dir/link.d "CMakeFiles/test-ngs_csra1.dir/ngstest_csra1.cpp.o" -o ../../../test-bin/test-ngs_csra1  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Building CXX object tools/external/ref-variation/CMakeFiles/ref-variation.dir/ref-variation.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/ref-variation\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/ref-variation/CMakeFiles/ref-variation.dir/ref-variation.cpp.o -MF CMakeFiles/ref-variation.dir/ref-variation.cpp.o.d -o CMakeFiles/ref-variation.dir/ref-variation.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/ref-variation/ref-variation.cpp
[ 97%] Built target test-ngs_csra1
make  -f tools/external/sra-search/test/CMakeFiles/test-sra-search.dir/build.make tools/external/sra-search/test/CMakeFiles/test-sra-search.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test/CMakeFiles/test-sra-search.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/sra-search/test/CMakeFiles/test-sra-search.dir/build.make tools/external/sra-search/test/CMakeFiles/test-sra-search.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Building CXX object tools/external/sra-search/test/CMakeFiles/test-sra-search.dir/test-sra-search.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/test-sra-search.dir/test-sra-search.cpp.o -MF CMakeFiles/test-sra-search.dir/test-sra-search.cpp.o.d -o CMakeFiles/test-sra-search.dir/test-sra-search.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/test-sra-search.cpp
[ 97%] Building CXX object tools/external/ref-variation/CMakeFiles/var-expand.dir/var-expand.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/var-expand\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/ref-variation/CMakeFiles/var-expand.dir/var-expand.cpp.o -MF CMakeFiles/var-expand.dir/var-expand.cpp.o.d -o CMakeFiles/var-expand.dir/var-expand.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/ref-variation/var-expand.cpp
[ 97%] Linking CXX executable ../../../bin/var-expand
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation && /usr/bin/cmake -E cmake_link_script CMakeFiles/var-expand.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/var-expand.dir/link.d "CMakeFiles/var-expand.dir/common.cpp.o" "CMakeFiles/var-expand.dir/helper.cpp.o" "CMakeFiles/var-expand.dir/var-expand.cpp.o" -o ../../../bin/var-expand  ../../../ilib/libtk-version.a -lkapp ../../../ilib/libngs-vdb.a ../../../lib/libncbi-ngs.a ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f var-expand.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv var-expand var-expand.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s var-expand.3.0.9 var-expand.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s var-expand.3 var-expand
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Built target var-expand
make  -f tools/external/sra-search/test/CMakeFiles/test-sra-search-slow.dir/build.make tools/external/sra-search/test/CMakeFiles/test-sra-search-slow.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test/CMakeFiles/test-sra-search-slow.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/sra-search/test/CMakeFiles/test-sra-search-slow.dir/build.make tools/external/sra-search/test/CMakeFiles/test-sra-search-slow.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Building CXX object tools/external/sra-search/test/CMakeFiles/test-sra-search-slow.dir/test-sra-search-slow.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/test-sra-search-slow.dir/test-sra-search-slow.cpp.o -MF CMakeFiles/test-sra-search-slow.dir/test-sra-search-slow.cpp.o.d -o CMakeFiles/test-sra-search-slow.dir/test-sra-search-slow.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/test-sra-search-slow.cpp
[ 97%] Linking CXX executable ../../../test-bin/test-ngs_sra
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_sra.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_sra.dir/link.d "CMakeFiles/test-ngs_sra.dir/ngstest_sra.cpp.o" -o ../../../test-bin/test-ngs_sra  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Built target test-ngs_sra
make  -f tools/external/sra-search/test/CMakeFiles/test-searchblock.dir/build.make tools/external/sra-search/test/CMakeFiles/test-searchblock.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test/CMakeFiles/test-searchblock.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/sra-search/test/CMakeFiles/test-searchblock.dir/build.make tools/external/sra-search/test/CMakeFiles/test-searchblock.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Building CXX object tools/external/sra-search/test/CMakeFiles/test-searchblock.dir/test-searchblock.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/test-searchblock.dir/test-searchblock.cpp.o -MF CMakeFiles/test-searchblock.dir/test-searchblock.cpp.o.d -o CMakeFiles/test-searchblock.dir/test-searchblock.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/test-searchblock.cpp
[ 97%] Linking CXX executable ../../../test-bin/test-ngs_csra1pileup++
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_csra1pileup++.dir/link.txt --verbose=1
[ 97%] Building CXX object tools/external/sra-search/CMakeFiles/sra-search.dir/searchblock.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-search/CMakeFiles/sra-search.dir/searchblock.cpp.o -MF CMakeFiles/sra-search.dir/searchblock.cpp.o.d -o CMakeFiles/sra-search.dir/searchblock.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/searchblock.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_csra1pileup++.dir/link.d "CMakeFiles/test-ngs_csra1pileup++.dir/CSRA1PileupTest.cpp.o" -o ../../../test-bin/test-ngs_csra1pileup++  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Built target test-ngs_csra1pileup++
make  -f tools/internal/vdb-sql/CMakeFiles/vdb-sql.dir/build.make tools/internal/vdb-sql/CMakeFiles/vdb-sql.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-sql /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-sql /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-sql/CMakeFiles/vdb-sql.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/vdb-sql/CMakeFiles/vdb-sql.dir/build.make tools/internal/vdb-sql/CMakeFiles/vdb-sql.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Building C object tools/internal/vdb-sql/CMakeFiles/vdb-sql.dir/vdb_shell.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-sql && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/vdb-sql\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-sql/CMakeFiles/vdb-sql.dir/vdb_shell.c.o -MF CMakeFiles/vdb-sql.dir/vdb_shell.c.o.d -o CMakeFiles/vdb-sql.dir/vdb_shell.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-sql/vdb_shell.c
[ 97%] Building CXX object tools/external/sra-search/CMakeFiles/sra-search.dir/fragmentmatchiterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-search/CMakeFiles/sra-search.dir/fragmentmatchiterator.cpp.o -MF CMakeFiles/sra-search.dir/fragmentmatchiterator.cpp.o.d -o CMakeFiles/sra-search.dir/fragmentmatchiterator.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/fragmentmatchiterator.cpp
[ 97%] Linking CXX executable ../../../bin/bam-load
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/bam-load.dir/link.txt --verbose=1
[ 97%] Linking CXX executable ../../../bin/ref-variation
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation && /usr/bin/cmake -E cmake_link_script CMakeFiles/ref-variation.dir/link.txt --verbose=1
[ 97%] Building CXX object tools/external/sra-search/CMakeFiles/sra-search.dir/blobmatchiterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-search/CMakeFiles/sra-search.dir/blobmatchiterator.cpp.o -MF CMakeFiles/sra-search.dir/blobmatchiterator.cpp.o.d -o CMakeFiles/sra-search.dir/blobmatchiterator.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/blobmatchiterator.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/bam-load.dir/link.d "CMakeFiles/bam-load.dir/bam-loader.c.o" "CMakeFiles/bam-load.dir/bam.c.o" "CMakeFiles/bam-load.dir/sam.c.o" "CMakeFiles/bam-load.dir/alignment-writer.c.o" "CMakeFiles/bam-load.dir/reference-writer.c.o" "CMakeFiles/bam-load.dir/sequence-writer.c.o" "CMakeFiles/bam-load.dir/loader-imp.c.o" "CMakeFiles/bam-load.dir/mem-bank.cpp.o" "CMakeFiles/bam-load.dir/low-match-count.cpp.o" -o ../../../bin/bam-load  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lz
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f bam-load.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv bam-load bam-load.3.0.9
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/ref-variation.dir/link.d "CMakeFiles/ref-variation.dir/common.cpp.o" "CMakeFiles/ref-variation.dir/helper.cpp.o" "CMakeFiles/ref-variation.dir/ref-variation.cpp.o" -o ../../../bin/ref-variation  ../../../ilib/libtk-version.a -lkapp ../../../ilib/libngs-vdb.a ../../../lib/libncbi-ngs.a ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f ref-variation.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv ref-variation ref-variation.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s bam-load.3.0.9 bam-load.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s bam-load.3 bam-load
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s ref-variation.3.0.9 ref-variation.3
[ 97%] Built target bam-load
make  -f tools/internal/vdb-sql/CMakeFiles/fastconv.dir/build.make tools/internal/vdb-sql/CMakeFiles/fastconv.dir/depend
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s ref-variation.3 ref-variation
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-sql /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-sql /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-sql/CMakeFiles/fastconv.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/vdb-sql/CMakeFiles/fastconv.dir/build.make tools/internal/vdb-sql/CMakeFiles/fastconv.dir/build
[ 97%] Built target ref-variation
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/pileup-stats/CMakeFiles/pileup-stats.dir/build.make tools/test-tools/pileup-stats/CMakeFiles/pileup-stats.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/pileup-stats /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats/CMakeFiles/pileup-stats.dir/DependInfo.cmake "--color="
[ 97%] Building C object tools/internal/vdb-sql/CMakeFiles/fastconv.dir/fastconv.c.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-sql && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/internal/vdb-sql\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-sql/CMakeFiles/fastconv.dir/fastconv.c.o -MF CMakeFiles/fastconv.dir/fastconv.c.o.d -o CMakeFiles/fastconv.dir/fastconv.c.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-sql/fastconv.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/pileup-stats/CMakeFiles/pileup-stats.dir/build.make tools/test-tools/pileup-stats/CMakeFiles/pileup-stats.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Building CXX object tools/test-tools/pileup-stats/CMakeFiles/pileup-stats.dir/pileup-stats.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/test-tools/pileup-stats/CMakeFiles/pileup-stats.dir/pileup-stats.cpp.o -MF CMakeFiles/pileup-stats.dir/pileup-stats.cpp.o.d -o CMakeFiles/pileup-stats.dir/pileup-stats.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/pileup-stats/pileup-stats.cpp
[ 97%] Linking C executable ../../../bin/fastconv
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-sql && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastconv.dir/link.txt --verbose=1
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/fastconv.dir/link.d CMakeFiles/fastconv.dir/fastconv.c.o -o ../../../bin/fastconv  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a ../../../ilib/libvdb-sqlite.a ../../../ilib/libngs.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f fastconv.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv fastconv fastconv.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s fastconv.3.0.9 fastconv.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s fastconv.3 fastconv
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Built target fastconv
make  -f test/external/ngs/testy-the-bear/CMakeFiles/testy-the-bear.dir/build.make test/external/ngs/testy-the-bear/CMakeFiles/testy-the-bear.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/ngs/testy-the-bear /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/ngs/testy-the-bear /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/ngs/testy-the-bear/CMakeFiles/testy-the-bear.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/ngs/testy-the-bear/CMakeFiles/testy-the-bear.dir/build.make test/external/ngs/testy-the-bear/CMakeFiles/testy-the-bear.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Building CXX object test/external/ngs/testy-the-bear/CMakeFiles/testy-the-bear.dir/testy-the-bear.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/ngs/testy-the-bear && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"test/ngs/testy-the-bear\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ncbi/ngs -I/build/reproducible-path/sra-sdk-3.0.9+dfsg -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/external/ngs/testy-the-bear/CMakeFiles/testy-the-bear.dir/testy-the-bear.cpp.o -MF CMakeFiles/testy-the-bear.dir/testy-the-bear.cpp.o.d -o CMakeFiles/testy-the-bear.dir/testy-the-bear.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/ngs/testy-the-bear/testy-the-bear.cpp
[ 97%] Building CXX object tools/external/sra-search/CMakeFiles/sra-search.dir/referencematchiterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-search/CMakeFiles/sra-search.dir/referencematchiterator.cpp.o -MF CMakeFiles/sra-search.dir/referencematchiterator.cpp.o.d -o CMakeFiles/sra-search.dir/referencematchiterator.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/referencematchiterator.cpp
[ 97%] Building CXX object tools/external/sra-search/test/CMakeFiles/test-searchblock.dir/__/searchblock.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/test-searchblock.dir/__/searchblock.cpp.o -MF CMakeFiles/test-searchblock.dir/__/searchblock.cpp.o.d -o CMakeFiles/test-searchblock.dir/__/searchblock.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/searchblock.cpp
[ 97%] Linking CXX executable ../../../../test-bin/test-searchblock
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-searchblock.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-searchblock.dir/link.d "CMakeFiles/test-searchblock.dir/test-searchblock.cpp.o" "CMakeFiles/test-searchblock.dir/__/searchblock.cpp.o" -o ../../../../test-bin/test-searchblock  ../../../../ilib/libngs-vdb.a ../../../../lib/libncbi-ngs.a -Wl,-Bstatic -lktst -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Linking CXX executable ../../../bin/pileup-stats
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pileup-stats.dir/link.txt --verbose=1
[ 97%] Built target test-searchblock
make  -f test/external/fasterq-dump/CMakeFiles/Build-fasterq-dump.dir/build.make test/external/fasterq-dump/CMakeFiles/Build-fasterq-dump.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/fasterq-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/fasterq-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/fasterq-dump/CMakeFiles/Build-fasterq-dump.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/fasterq-dump/CMakeFiles/Build-fasterq-dump.dir/build.make test/external/fasterq-dump/CMakeFiles/Build-fasterq-dump.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/fasterq-dump/CMakeFiles/Build-fasterq-dump.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Linking CXX executable ../../../../test-bin/testy-the-bear
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/ngs/testy-the-bear && /usr/bin/cmake -E cmake_link_script CMakeFiles/testy-the-bear.dir/link.txt --verbose=1
[ 97%] Built target Build-fasterq-dump
make  -f test/external/ngs-pileup/CMakeFiles/Build-ngs-pileup.dir/build.make test/external/ngs-pileup/CMakeFiles/Build-ngs-pileup.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/ngs-pileup /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/ngs-pileup /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/ngs-pileup/CMakeFiles/Build-ngs-pileup.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/ngs-pileup/CMakeFiles/Build-ngs-pileup.dir/build.make test/external/ngs-pileup/CMakeFiles/Build-ngs-pileup.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/ngs-pileup/CMakeFiles/Build-ngs-pileup.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Built target Build-ngs-pileup
make  -f test/external/prefetch/CMakeFiles/Build-prefetch.dir/build.make test/external/prefetch/CMakeFiles/Build-prefetch.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/prefetch /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/prefetch /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/prefetch/CMakeFiles/Build-prefetch.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/prefetch/CMakeFiles/Build-prefetch.dir/build.make test/external/prefetch/CMakeFiles/Build-prefetch.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/prefetch/CMakeFiles/Build-prefetch.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Built target Build-prefetch
make  -f test/external/sam-dump/CMakeFiles/Build-sam-dump.dir/build.make test/external/sam-dump/CMakeFiles/Build-sam-dump.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sam-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/sam-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/sam-dump/CMakeFiles/Build-sam-dump.dir/DependInfo.cmake "--color="
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/pileup-stats.dir/link.d "CMakeFiles/pileup-stats.dir/pileup-stats.cpp.o" -o ../../../bin/pileup-stats  ../../../ilib/libgeneral-writer.a ../../../lib/libncbi-ngs.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f pileup-stats.3.0.9
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/sam-dump/CMakeFiles/Build-sam-dump.dir/build.make test/external/sam-dump/CMakeFiles/Build-sam-dump.dir/build
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv pileup-stats pileup-stats.3.0.9
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/sam-dump/CMakeFiles/Build-sam-dump.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Built target Build-sam-dump
make  -f test/external/vdb-config/CMakeFiles/Build-vdb-config.dir/build.make test/external/vdb-config/CMakeFiles/Build-vdb-config.dir/depend
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s pileup-stats.3.0.9 pileup-stats.3
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/vdb-config /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-config /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-config/CMakeFiles/Build-vdb-config.dir/DependInfo.cmake "--color="
[ 97%] Building CXX object tools/external/sra-search/test/CMakeFiles/test-sra-search.dir/__/vdb-search.cpp.o
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testy-the-bear.dir/link.d "CMakeFiles/testy-the-bear.dir/testy-the-bear.cpp.o" -o ../../../../test-bin/testy-the-bear  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a ../../../../lib/libncbi-ngs-c++.a ../../../../lib/libncbi-ngs.a ../../../../ilib/libngs.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/test-sra-search.dir/__/vdb-search.cpp.o -MF CMakeFiles/test-sra-search.dir/__/vdb-search.cpp.o.d -o CMakeFiles/test-sra-search.dir/__/vdb-search.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/vdb-search.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s pileup-stats.3 pileup-stats
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/vdb-config/CMakeFiles/Build-vdb-config.dir/build.make test/external/vdb-config/CMakeFiles/Build-vdb-config.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/vdb-config/CMakeFiles/Build-vdb-config.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Built target pileup-stats
[ 97%] Built target testy-the-bear
make  -f test/external/vdb-validate/CMakeFiles/Build-vdb-validate.dir/build.make test/external/vdb-validate/CMakeFiles/Build-vdb-validate.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/vdb-validate /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-validate /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/external/vdb-validate/CMakeFiles/Build-vdb-validate.dir/DependInfo.cmake "--color="
make  -f test/loaders/bam-load/CMakeFiles/Build-bam-load.dir/build.make test/loaders/bam-load/CMakeFiles/Build-bam-load.dir/depend
[ 97%] Built target Build-vdb-config
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/bam-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/bam-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/bam-load/CMakeFiles/Build-bam-load.dir/DependInfo.cmake "--color="
make  -f test/loaders/fastq-loader/CMakeFiles/Build-latf-load.dir/build.make test/loaders/fastq-loader/CMakeFiles/Build-latf-load.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader/CMakeFiles/Build-latf-load.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/vdb-validate/CMakeFiles/Build-vdb-validate.dir/build.make test/external/vdb-validate/CMakeFiles/Build-vdb-validate.dir/build
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/vdb-validate/CMakeFiles/Build-vdb-validate.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/bam-load/CMakeFiles/Build-bam-load.dir/build.make test/loaders/bam-load/CMakeFiles/Build-bam-load.dir/build
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/fastq-loader/CMakeFiles/Build-latf-load.dir/build.make test/loaders/fastq-loader/CMakeFiles/Build-latf-load.dir/build
make[3]: Nothing to be done for 'test/loaders/bam-load/CMakeFiles/Build-bam-load.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/loaders/fastq-loader/CMakeFiles/Build-latf-load.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Built target Build-vdb-validate
[ 97%] Built target Build-bam-load
make  -f test/loaders/fastq-loader/CMakeFiles/SlowTest_FastqLoader_id2name.dir/build.make test/loaders/fastq-loader/CMakeFiles/SlowTest_FastqLoader_id2name.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader/CMakeFiles/SlowTest_FastqLoader_id2name.dir/DependInfo.cmake "--color="
make  -f test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/build.make test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/depend
[ 97%] Built target Build-latf-load
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/fastq-loader/CMakeFiles/SlowTest_FastqLoader_id2name.dir/build.make test/loaders/fastq-loader/CMakeFiles/SlowTest_FastqLoader_id2name.dir/build
[ 97%] Building CXX object tools/external/sra-search/CMakeFiles/sra-search.dir/vdb-search.cpp.o
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -D__mod__=\"tools/sra-search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-search/CMakeFiles/sra-search.dir/vdb-search.cpp.o -MF CMakeFiles/sra-search.dir/vdb-search.cpp.o.d -o CMakeFiles/sra-search.dir/vdb-search.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/vdb-search.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/build.make test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 97%] Building CXX object test/loaders/fastq-loader/CMakeFiles/SlowTest_FastqLoader_id2name.dir/test-id2name.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/loaders/fastq-loader/CMakeFiles/SlowTest_FastqLoader_id2name.dir/test-id2name.cpp.o -MF CMakeFiles/SlowTest_FastqLoader_id2name.dir/test-id2name.cpp.o.d -o CMakeFiles/SlowTest_FastqLoader_id2name.dir/test-id2name.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/test-id2name.cpp
[ 97%] Building CXX object test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/wb-test-fastq.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/wb-test-fastq.cpp.o -MF CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/wb-test-fastq.cpp.o.d -o CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/wb-test-fastq.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/wb-test-fastq.cpp
[ 97%] Linking CXX executable ../../../test-bin/test-ngs_sra_c++
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_sra_c++.dir/link.txt --verbose=1
[ 98%] Linking C executable ../../../bin/vdb-sql
[ 98%] Building CXX object tools/external/sra-search/test/CMakeFiles/test-sra-search.dir/__/searchblock.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-sql && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-sql.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/test-sra-search.dir/__/searchblock.cpp.o -MF CMakeFiles/test-sra-search.dir/__/searchblock.cpp.o.d -o CMakeFiles/test-sra-search.dir/__/searchblock.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/searchblock.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_sra_c++.dir/link.d "CMakeFiles/test-ngs_sra_c++.dir/SRAtest.cpp.o" -o ../../../test-bin/test-ngs_sra_c++  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 98%] Built target test-ngs_sra_c++
/usr/bin/cc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-sql.dir/link.d "CMakeFiles/vdb-sql.dir/vdb_shell.c.o" -o ../../../bin/vdb-sql  ../../../ilib/libvdb-sqlite.a ../../../ilib/libngs.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f vdb-sql.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv vdb-sql vdb-sql.3.0.9
[ 98%] Building CXX object tools/external/sra-search/test/CMakeFiles/test-sra-search.dir/__/blobmatchiterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/test-sra-search.dir/__/blobmatchiterator.cpp.o -MF CMakeFiles/test-sra-search.dir/__/blobmatchiterator.cpp.o.d -o CMakeFiles/test-sra-search.dir/__/blobmatchiterator.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/blobmatchiterator.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-sql.3.0.9 vdb-sql.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-sql.3 vdb-sql
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 98%] Linking CXX executable ../../../test-bin/test-ngs_sradb_c++
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_sradb_c++.dir/link.txt --verbose=1
[ 98%] Built target vdb-sql
make  -f test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqParse.dir/build.make test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqParse.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqParse.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqParse.dir/build.make test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqParse.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[ 99%] Building CXX object test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqParse.dir/wb-test-fastq-parse.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqParse.dir/wb-test-fastq-parse.cpp.o -MF CMakeFiles/Test_FastqLoader_WbFastqParse.dir/wb-test-fastq-parse.cpp.o.d -o CMakeFiles/Test_FastqLoader_WbFastqParse.dir/wb-test-fastq-parse.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/wb-test-fastq-parse.cpp
[100%] Building CXX object tools/external/sra-search/test/CMakeFiles/test-sra-search-slow.dir/__/vdb-search.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/test-sra-search-slow.dir/__/vdb-search.cpp.o -MF CMakeFiles/test-sra-search-slow.dir/__/vdb-search.cpp.o.d -o CMakeFiles/test-sra-search-slow.dir/__/vdb-search.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/vdb-search.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_sradb_c++.dir/link.d "CMakeFiles/test-ngs_sradb_c++.dir/SRADBtest.cpp.o" -o ../../../test-bin/test-ngs_sradb_c++  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[100%] Linking CXX executable ../../../test-bin/test-ngs-vdb
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs-vdb.dir/link.txt --verbose=1
[100%] Built target test-ngs_sradb_c++
make  -f test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/build.make test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/build.make test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[100%] Building CXX object test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/test-fastq-loader.cpp.o
[100%] Building CXX object tools/external/sra-search/test/CMakeFiles/test-sra-search.dir/__/fragmentmatchiterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/test-fastq-loader.cpp.o -MF CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/test-fastq-loader.cpp.o.d -o CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/test-fastq-loader.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/test-fastq-loader.cpp
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/test-sra-search.dir/__/fragmentmatchiterator.cpp.o -MF CMakeFiles/test-sra-search.dir/__/fragmentmatchiterator.cpp.o.d -o CMakeFiles/test-sra-search.dir/__/fragmentmatchiterator.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/fragmentmatchiterator.cpp
[100%] Building CXX object tools/external/sra-search/test/CMakeFiles/test-sra-search.dir/__/referencematchiterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/test-sra-search.dir/__/referencematchiterator.cpp.o -MF CMakeFiles/test-sra-search.dir/__/referencematchiterator.cpp.o.d -o CMakeFiles/test-sra-search.dir/__/referencematchiterator.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/referencematchiterator.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs-vdb.dir/link.d "CMakeFiles/test-ngs-vdb.dir/test-ngs-vdb.cpp.o" -o ../../../test-bin/test-ngs-vdb  ../../../ilib/libtk-version.a ../../../ilib/libngs-vdb.a -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[100%] Built target test-ngs-vdb
make  -f test/loaders/kar/CMakeFiles/Build-kar.dir/build.make test/loaders/kar/CMakeFiles/Build-kar.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/kar /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/kar /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/kar/CMakeFiles/Build-kar.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/kar/CMakeFiles/Build-kar.dir/build.make test/loaders/kar/CMakeFiles/Build-kar.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/loaders/kar/CMakeFiles/Build-kar.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[100%] Linking CXX executable ../../../bin/sra-search
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search && /usr/bin/cmake -E cmake_link_script CMakeFiles/sra-search.dir/link.txt --verbose=1
[100%] Built target Build-kar
make  -f test/loaders/sra-sort/CMakeFiles/Build-sra-sort.dir/build.make test/loaders/sra-sort/CMakeFiles/Build-sra-sort.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/sra-sort /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/sra-sort /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/sra-sort/CMakeFiles/Build-sra-sort.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/sra-sort/CMakeFiles/Build-sra-sort.dir/build.make test/loaders/sra-sort/CMakeFiles/Build-sra-sort.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/loaders/sra-sort/CMakeFiles/Build-sra-sort.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[100%] Built target Build-sra-sort
[100%] Building CXX object tools/external/sra-search/test/CMakeFiles/test-sra-search-slow.dir/__/searchblock.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/test-sra-search-slow.dir/__/searchblock.cpp.o -MF CMakeFiles/test-sra-search-slow.dir/__/searchblock.cpp.o.d -o CMakeFiles/test-sra-search-slow.dir/__/searchblock.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/searchblock.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sra-search.dir/link.d "CMakeFiles/sra-search.dir/main.cpp.o" "CMakeFiles/sra-search.dir/searchblock.cpp.o" "CMakeFiles/sra-search.dir/fragmentmatchiterator.cpp.o" "CMakeFiles/sra-search.dir/blobmatchiterator.cpp.o" "CMakeFiles/sra-search.dir/referencematchiterator.cpp.o" "CMakeFiles/sra-search.dir/vdb-search.cpp.o" -o ../../../bin/sra-search  ../../../ilib/libngs-vdb.a ../../../lib/libncbi-ngs.a ../../../ilib/libtk-version.a -Wl,-Bstatic -lkapp -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && rm -f sra-search.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && mv sra-search sra-search.3.0.9
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-search.3.0.9 sra-search.3
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-search.3 sra-search
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[100%] Building CXX object tools/external/sra-search/test/CMakeFiles/test-sra-search-slow.dir/__/blobmatchiterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/test-sra-search-slow.dir/__/blobmatchiterator.cpp.o -MF CMakeFiles/test-sra-search-slow.dir/__/blobmatchiterator.cpp.o.d -o CMakeFiles/test-sra-search-slow.dir/__/blobmatchiterator.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/blobmatchiterator.cpp
[100%] Built target sra-search
make  -f tools/external/sra-search/test/CMakeFiles/Build-sra-search.dir/build.make tools/external/sra-search/test/CMakeFiles/Build-sra-search.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.0.9+dfsg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test/CMakeFiles/Build-sra-search.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/sra-search/test/CMakeFiles/Build-sra-search.dir/build.make tools/external/sra-search/test/CMakeFiles/Build-sra-search.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'tools/external/sra-search/test/CMakeFiles/Build-sra-search.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[100%] Built target Build-sra-search
[100%] Building CXX object tools/external/sra-search/test/CMakeFiles/test-sra-search-slow.dir/__/fragmentmatchiterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/test-sra-search-slow.dir/__/fragmentmatchiterator.cpp.o -MF CMakeFiles/test-sra-search-slow.dir/__/fragmentmatchiterator.cpp.o.d -o CMakeFiles/test-sra-search-slow.dir/__/fragmentmatchiterator.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/fragmentmatchiterator.cpp
[100%] Building CXX object tools/external/sra-search/test/CMakeFiles/test-sra-search-slow.dir/__/referencematchiterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++11   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/test-sra-search-slow.dir/__/referencematchiterator.cpp.o -MF CMakeFiles/test-sra-search-slow.dir/__/referencematchiterator.cpp.o.d -o CMakeFiles/test-sra-search-slow.dir/__/referencematchiterator.cpp.o -c /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/referencematchiterator.cpp
[100%] Linking CXX executable ../../../test-bin/SlowTest_FastqLoader_id2name
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/SlowTest_FastqLoader_id2name.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/SlowTest_FastqLoader_id2name.dir/link.d "CMakeFiles/SlowTest_FastqLoader_id2name.dir/test-id2name.cpp.o" -o ../../../test-bin/SlowTest_FastqLoader_id2name  ../../../ilib/libfastqloader.a ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[100%] Linking CXX executable ../../../../test-bin/test-sra-search
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-sra-search.dir/link.txt --verbose=1
[100%] Built target SlowTest_FastqLoader_id2name
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-sra-search.dir/link.d "CMakeFiles/test-sra-search.dir/test-sra-search.cpp.o" "CMakeFiles/test-sra-search.dir/__/vdb-search.cpp.o" "CMakeFiles/test-sra-search.dir/__/searchblock.cpp.o" "CMakeFiles/test-sra-search.dir/__/blobmatchiterator.cpp.o" "CMakeFiles/test-sra-search.dir/__/fragmentmatchiterator.cpp.o" "CMakeFiles/test-sra-search.dir/__/referencematchiterator.cpp.o" -o ../../../../test-bin/test-sra-search  ../../../../ilib/libngs-vdb.a ../../../../lib/libncbi-ngs.a -Wl,-Bstatic -lktst -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[100%] Built target test-sra-search
[100%] Linking CXX executable ../../../../test-bin/test-sra-search-slow
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-sra-search-slow.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-sra-search-slow.dir/link.d "CMakeFiles/test-sra-search-slow.dir/test-sra-search-slow.cpp.o" "CMakeFiles/test-sra-search-slow.dir/__/vdb-search.cpp.o" "CMakeFiles/test-sra-search-slow.dir/__/searchblock.cpp.o" "CMakeFiles/test-sra-search-slow.dir/__/blobmatchiterator.cpp.o" "CMakeFiles/test-sra-search-slow.dir/__/fragmentmatchiterator.cpp.o" "CMakeFiles/test-sra-search-slow.dir/__/referencematchiterator.cpp.o" -o ../../../../test-bin/test-sra-search-slow  ../../../../ilib/libngs-vdb.a ../../../../lib/libncbi-ngs.a -Wl,-Bstatic -lktst -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[100%] Built target test-sra-search-slow
[100%] Linking CXX executable ../../../test-bin/Test_FastqLoader_WbFastqParse
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_FastqLoader_WbFastqParse.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_FastqLoader_WbFastqParse.dir/link.d "CMakeFiles/Test_FastqLoader_WbFastqParse.dir/wb-test-fastq-parse.cpp.o" -o ../../../test-bin/Test_FastqLoader_WbFastqParse  ../../../ilib/libfastqloader.a ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[100%] Built target Test_FastqLoader_WbFastqParse
[100%] Linking CXX executable ../../../test-bin/Test_FastqLoader_WbFastqLoader
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/link.d "CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/test-fastq-loader.cpp.o" -o ../../../test-bin/Test_FastqLoader_WbFastqLoader  ../../../ilib/libfastqloader.a ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[100%] Built target Test_FastqLoader_WbFastqLoader
[100%] Linking CXX executable ../../../test-bin/test-ngs_csra1_c++
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_csra1_c++.dir/link.txt --verbose=1
[100%] Linking CXX executable ../../../test-bin/Test_FastqLoader_WbFastq_dflt
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/link.d "CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/wb-test-fastq.cpp.o" -o ../../../test-bin/Test_FastqLoader_WbFastq_dflt  ../../../ilib/libfastqloader.a ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[100%] Built target Test_FastqLoader_WbFastq_dflt
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_csra1_c++.dir/link.d "CMakeFiles/test-ngs_csra1_c++.dir/CSRA1test.cpp.o" -o ../../../test-bin/test-ngs_csra1_c++  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[100%] Built target test-ngs_csra1_c++
[100%] Linking CXX executable ../../../bin/sam-analyze
cd /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sam-analyze && /usr/bin/cmake -E cmake_link_script CMakeFiles/sam-analyze.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.0.9+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sam-analyze.dir/link.d "CMakeFiles/sam-analyze.dir/main.cpp.o" "CMakeFiles/sam-analyze.dir/sqlite3.c.o" -o ../../../bin/sam-analyze  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
[100%] Built target sam-analyze
make[2]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/CMakeFiles 0
make[1]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
   jh_build -O--buildsystem=cmake
   debian/rules override_dh_auto_test
make[1]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg'
cd obj-aarch64-linux-gnu  && \
    ctest --force-new-ctest-process --verbose -j1 -LE online
UpdateCTestConfiguration  from :/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/DartConfiguration.tcl
Parse Config file:/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/DartConfiguration.tcl
UpdateCTestConfiguration  from :/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/DartConfiguration.tcl
Parse Config file:/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/DartConfiguration.tcl
Test project /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu
Constructing a list of tests
Done constructing a list of tests
Updating test list for fixtures
Added 0 tests to meet fixture requirements
Checking test dependency graph...
Checking test dependency graph end
test 9
        Start   9: Test_NGS_Python_install

9: Test command: /usr/bin/python3 "/build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-python/setup.py" "-q" "install" "--user"
9: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/ngs/ngs-python
9: Environment variables: 
9:  PYTHONUSERBASE=/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/tmp/python
9: Test timeout computed to be: 1500
9: /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
9: !!
9: 
9:         ********************************************************************************
9:         Please avoid running ``setup.py`` directly.
9:         Instead, use pypa/build, pypa/installer or other
9:         standards-based tools.
9: 
9:         See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
9:         ********************************************************************************
9: 
9: !!
9:   self.initialize_options()
9: /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: EasyInstallDeprecationWarning: easy_install command is deprecated.
9: !!
9: 
9:         ********************************************************************************
9:         Please avoid running ``setup.py`` and ``easy_install``.
9:         Instead, use pypa/build, pypa/installer or other
9:         standards-based tools.
9: 
9:         See https://github.com/pypa/setuptools/issues/917 for details.
9:         ********************************************************************************
9: 
9: !!
9:   self.initialize_options()
9: build/bdist.linux-aarch64/egg/ngs/LibManager.py:123: SyntaxWarning: invalid escape sequence '\.'
9:   arr = re.split('\.\s*|\-\s*|\s+', version_str)
9: zip_safe flag not set; analyzing archive contents...
  1/187 Test   #9: Test_NGS_Python_install ...........................   Passed    0.39 sec
test 15
        Start  15: Ngs_MakeDB

15: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/ngs-makedb
15: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test/data
15: Test timeout computed to be: 1500
15: Running 1 test case...
15: SparseFragmentBlobs (0 s)
15: 
15: *** No errors detected (0 s total)
  2/187 Test  #15: Ngs_MakeDB ........................................   Passed    0.06 sec
test 16
        Start  16: Test_Ngs

16: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/test-ngs
16: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/ngs-vdb/test
16: Test timeout computed to be: 1500
16: 
16: *** No errors detected (0 s total)
  3/187 Test  #16: Test_Ngs ..........................................   Passed    0.02 sec
test 32
        Start  32: GeneralWriterTest

32: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/test-general-writer
32: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/libs/general-writer/test
32: Test timeout computed to be: 1500
32: CreateGw Success
32: ---------------------------------
32: addTable Success
32: ---------------------------------
32: addColumn Success
32: ---------------------------------
32: dbAddDatabase Success
32: ---------------------------------
32: dbAddTable Success
32: ---------------------------------
32: write Success
32: ---------------------------------
32: setDBMetadataNode Success
32: ---------------------------------
32: setTblMetadataNode Success
32: ---------------------------------
32: setColMetadataNode Success
32: ---------------------------------
32: setProgMsg Success
32: ---------------------------------
32: Attempting add table after endStream
32: state violation adding table
32: addTable correctly failed
32: endStream Success
32: ---------------------------------
  4/187 Test  #32: GeneralWriterTest .................................   Passed    0.02 sec
test 33
        Start  33: Ref-Variation-1.0

33: Test command: /usr/bin/sh "./have-access.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "ref-variation"
33: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/ref-variation/test
33: Test timeout computed to be: 1500
33: ./have-access.sh: 6: vdb-config: not found
33: no access to repository, skipping ref-variation test...
  5/187 Test  #33: Ref-Variation-1.0 .................................   Passed    0.01 sec
test 34
        Start  34: Var-Expand-1.0

34: Test command: /usr/bin/sh "./have-access.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "var-expand"
34: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/ref-variation/test
34: Test timeout computed to be: 1500
34: ./have-access.sh: 6: vdb-config: not found
34: no access to repository, skipping var-expand test...
  6/187 Test  #34: Var-Expand-1.0 ....................................   Passed    0.01 sec
test 35
        Start  35: SearchBlockWhiteBox

35: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/test-searchblock
35: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test
35: Test timeout computed to be: 1500
35: Running 8 test cases...
35: FgrepDumb (0 s)
35: SearchFgrepBoyerMoore (0 s)
35: SearchFgrepAho (0 s)
35: SearchAgrepDP (0 s)
35: SearchNucStrstr_NoExpr_NoCoords (0 s)
35: SearchNucStrstr_NoExpr_Coords_NotSupported (0 s)
35: SearchNucStrstr_Expr_Coords (0 s)
35: SearchSmithWaterman_Coords_NotSupported (0 s)
35: 
35: *** No errors detected (0 s total)
  7/187 Test  #35: SearchBlockWhiteBox ...............................   Passed    0.01 sec
test 38
        Start  38: SraSearch-1.0-h

38: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "1.0-h" "--args" "-h"
38: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test
38: Test timeout computed to be: 1500
38: running test case 1.0-h... passed
  8/187 Test  #38: SraSearch-1.0-h ...................................   Passed    0.02 sec
test 39
        Start  39: SraSearch-1.1-help

39: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "1.1-help" "--args" "--help"
39: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test
39: Test timeout computed to be: 1500
39: running test case 1.1-help... passed
  9/187 Test  #39: SraSearch-1.1-help ................................   Passed    0.02 sec
test 40
        Start  40: SraSearch-1.2-V

40: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/execandgrep.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-search -V" "3.0.9"
40: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test
40: Test timeout computed to be: 1500
40: sra-search : 3.0.9
 10/187 Test  #40: SraSearch-1.2-V ...................................   Passed    0.01 sec
test 41
        Start  41: SraSearch-1.3-version

41: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/execandgrep.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-search --version" "3.0.9"
41: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test
41: Test timeout computed to be: 1500
41: sra-search : 3.0.9
 11/187 Test  #41: SraSearch-1.3-version .............................   Passed    0.01 sec
test 42
        Start  42: SraSearch-2.0-no-args

42: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "2.0-no-args" "--rc" "3"
42: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test
42: Test timeout computed to be: 1500
42: running test case 2.0-no-args... passed
 12/187 Test  #42: SraSearch-2.0-no-args .............................   Passed    0.05 sec
test 43
        Start  43: SraSearch-2.1-no-run

43: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "2.1-no-run" "--rc" "3" "--args" "AGCT"
43: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test
43: Test timeout computed to be: 1500
43: running test case 2.1-no-run... passed
 13/187 Test  #43: SraSearch-2.1-no-run ..............................   Passed    0.02 sec
test 44
        Start  44: SraSearch-2.2-missing-algorithm

44: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "2.2-missing-algorithm" "--rc" "3" "--args" "AGCT SRR000001 -a"
44: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test
44: Test timeout computed to be: 1500
44: running test case 2.2-missing-algorithm... passed
 14/187 Test  #44: SraSearch-2.2-missing-algorithm ...................   Passed    0.03 sec
test 45
        Start  45: SraSearch-2.3-bad-algorithm

45: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "2.3-bad-algorithm" "--rc" "3" "--args" "--algorithm bad AGCT SRR000001"
45: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test
45: Test timeout computed to be: 1500
45: running test case 2.3-bad-algorithm... passed
 15/187 Test  #45: SraSearch-2.3-bad-algorithm .......................   Passed    0.02 sec
test 61
        Start  61: SraSearch-5.1-run-not-nucstrstr-with-expression

61: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "5.1-run-not-nucstrstr-with-expression" "--args" "AAAAAAACCCCCCCAAAAAAACCCCCCC\|\|AGCTAGCTAGCT --algorithm FgrepStandard --expression  SRR000001" "--rc" "3"
61: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test
61: Test timeout computed to be: 1500
61: running test case 5.1-run-not-nucstrstr-with-expression... passed
 16/187 Test  #61: SraSearch-5.1-run-not-nucstrstr-with-expression ...   Passed    0.02 sec
test 62
        Start  62: SraSearch-6.0.1-imperfect-match-no-arg

62: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "6.0.1-imperfect-match-no-arg" "--args" "AGCTAGCTAGCT SRR000001 -S" "--rc" "3"
62: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test
62: Test timeout computed to be: 1500
62: running test case 6.0.1-imperfect-match-no-arg... passed
 17/187 Test  #62: SraSearch-6.0.1-imperfect-match-no-arg ............   Passed    0.02 sec
test 63
        Start  63: SraSearch-6.0.2-imperfect-match-bad-arg

63: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "6.0.2-imperfect-match-bad-arg" "--args" "AGCTAGCTAGCT SRR000001 -S qq" "--rc" "3"
63: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test
63: Test timeout computed to be: 1500
63: running test case 6.0.2-imperfect-match-bad-arg... passed
 18/187 Test  #63: SraSearch-6.0.2-imperfect-match-bad-arg ...........   Passed    0.02 sec
test 64
        Start  64: SraSearch-6.0.3-imperfect-match-default

64: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "6.0.3-imperfect-match-default" "--args" "AGCTAGCTAGCT -S 90 SRR000001" "--rc" "3"
64: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test
64: Test timeout computed to be: 1500
64: running test case 6.0.3-imperfect-match-default... passed
 19/187 Test  #64: SraSearch-6.0.3-imperfect-match-default ...........   Passed    0.02 sec
test 65
        Start  65: SraSearch-6.1-imperfect-match-fgrep-standard

65: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "6.1-imperfect-match-fgrep-standard" "--args" "AGCTAGCTAGCT --score 90 -a FgrepStandard SRR000001" "--rc" "3"
65: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test
65: Test timeout computed to be: 1500
65: running test case 6.1-imperfect-match-fgrep-standard... passed
 20/187 Test  #65: SraSearch-6.1-imperfect-match-fgrep-standard ......   Passed    0.02 sec
test 66
        Start  66: SraSearch-6.2-imperfect-match-fgrep-boyer-moore

66: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "6.2-imperfect-match-fgrep-boyer-moore" "--args" "AGCTAGCTAGCT --score 90 --algorithm FgrepBoyerMoore SRR000001" "--rc" "3"
66: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test
66: Test timeout computed to be: 1500
66: running test case 6.2-imperfect-match-fgrep-boyer-moore... passed
 21/187 Test  #66: SraSearch-6.2-imperfect-match-fgrep-boyer-moore ...   Passed    0.02 sec
test 67
        Start  67: SraSearch-6.3-imperfect-match-fgrep-aho

67: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "6.3-imperfect-match-fgrep-aho" "--args" "AGCTAGCTAGCT --score 90 --algorithm FgrepAho SRR000001" "--rc" "3"
67: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test
67: Test timeout computed to be: 1500
67: running test case 6.3-imperfect-match-fgrep-aho... passed
 22/187 Test  #67: SraSearch-6.3-imperfect-match-fgrep-aho ...........   Passed    0.02 sec
test 72
        Start  72: SraSearch-6.8-imperfect-match-nucstrstr

72: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "6.8-imperfect-match-nucstrstr" "--args" "AGCTAGCTAGCT --score 90 --algorithm NucStrstr SRR000001" "--rc" "3"
72: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test
72: Test timeout computed to be: 1500
72: running test case 6.8-imperfect-match-nucstrstr... passed
 23/187 Test  #72: SraSearch-6.8-imperfect-match-nucstrstr ...........   Passed    0.02 sec
test 74
        Start  74: SraSearch-7.0.1-threads-no-arg

74: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "7.0.1-threads-no-arg" "--rc" "3" "--args" "AGCTAGCTAGCT SRR600094 SRR600095 -T"
74: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test
74: Test timeout computed to be: 1500
74: running test case 7.0.1-threads-no-arg... passed
 24/187 Test  #74: SraSearch-7.0.1-threads-no-arg ....................   Passed    0.04 sec
test 75
        Start  75: SraSearch-7.0.2-threads-bad-arg

75: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "7.0.2-threads-bad-arg" "--rc" "3" "--args" "AGCTAGCTAGCT SRR600094 SRR600095 --threads -1"
75: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test
75: Test timeout computed to be: 1500
75: running test case 7.0.2-threads-bad-arg... passed
 25/187 Test  #75: SraSearch-7.0.2-threads-bad-arg ...................   Passed    0.04 sec
test 80
        Start  80: SlowTest_SraSearch-8.0-nothing-found

80: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "8.0-nothing-found" "--rc" "3" "--args" "TTTTTTTTAAAAAAACCCC -T 1 SRR000001"
80: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test
80: Test timeout computed to be: 1500
80: running test case 8.0-nothing-found... passed
 26/187 Test  #80: SlowTest_SraSearch-8.0-nothing-found ..............   Passed    1.10 sec
test 84
        Start  84: SraSearch-9.3-reference-expression

84: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "9.3-reference-expression" "--args" "ACGTAGGGTCC SRR600094 --reference --expression" "--rc" "3"
84: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/external/sra-search/test
84: Test timeout computed to be: 1500
84: running test case 9.3-reference-expression... passed
 27/187 Test  #84: SraSearch-9.3-reference-expression ................   Passed    0.04 sec
test 86
        Start  86: GeneralLoaderWhiteBox

86: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/test-general-loader
86: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test
86: Test timeout computed to be: 1500
86: Unpacked protocol: Running 62 test cases...
86: EmptyInput (0 s)
86: ShortInput (0 s)
86: BadSignature (0 s)
86: BadEndianness (0 s)
86: ReverseEndianness (0 s)
86: LaterVersion (0 s)
86: BadSchemaFileName (0 s)
86: BadSchemaFileName_Long (0 s)
86: BadSchemaName (0 s)
86: BadSchemaName_Long (0 s)
86: BadTableName (0 s)
86: BadTableName_Long (0 s)
86: DuplicateTableId (0 s)
86: BadColumnName (0 s)
86: BadTableId (0 s)
86: DuplicateColumnName (0 s)
86: DuplicateColumnId (0 s)
86: NoOpenStreamEvent (0 s)
86: NoCloseStreamEvent (0 s)
86: NoColumns (0 s)
86: SoftwareName (0 s)
86: SoftwareName_BadVersion (0 s)
86: DBAddDatabase (0 s)
86: DBAddSubDatabase (0 s)
86: DBAddTable (0 s)
86: DBAddTableToSubDb (0 s)
86: DBMetadataNode (0 s)
86: SubDBMetadataNode (0 s)
86: TblMetadataNode (0 s)
86: ColMetadataNode (0 s)
86: NoData (0 s)
86: Chunk_BadColumnId (0 s)
86: WriteNoCommit (0 s)
86: CommitBadTableId (0 s)
86: OneColumnOneCellOneChunk (0 s)
86: OneColumnOneCellOneChunk_Long (0 s)
86: OneColumnOneCellManyChunks (0 s)
86: IntegerCompression_MinimumCompression (0 s)
86: IntegerCompression_MaximumCompression (0 s)
86: IntegerCompression_MultipleValues (0 s)
86: OneColumnDefaultNoWrite (0 s)
86: OneColumnDefaultNoWrite_Long (0 s)
86: MoveAhead (0 s)
86: OneColumnDefaultOverwite (0 s)
86: OneColumnChangeDefault (0 s)
86: OneColumnDataAndDefaultsMixed (0 s)
86: TwoColumnsFullRow (0 s)
86: TwoColumnsIncompleteRow (0 s)
86: TwoColumnsPartialRowWithDefaults (0 s)
86: TwoColumnsPartialRowWithDefaultsAndOverride (0 s)
86: EmptyDefault_String (0 s)
86: EmptyDefault_Int (0 s)
86: MultipleTables_Multiple_Columns_MultipleRows (0 s)
86: AdditionalSchemaIncludePaths_Single (0 s)
86: AdditionalSchemaIncludePaths_Multiple (0 s)
86: AdditionalSchemaFiles_Single (0 s)
86: AdditionalSchemaFiles_Multiple (0 s)
86: ErrorMessage (0 s)
86: ErrorMessage_Long (0 s)
86: LogMessage (0 s)
86: ProgressMessage (0 s)
86: TargetOverride (0 s)
86: 
86: *** No errors detected (0 s total)
86: Packed protocol: Running 62 test cases...
86: EmptyInput (0 s)
86: ShortInput (0 s)
86: BadSignature (0 s)
86: BadEndianness (0 s)
86: ReverseEndianness (0 s)
86: LaterVersion (0 s)
86: BadSchemaFileName (0 s)
86: BadSchemaFileName_Long (0 s)
86: BadSchemaName (0 s)
86: BadSchemaName_Long (0 s)
86: BadTableName (0 s)
86: BadTableName_Long (0 s)
86: DuplicateTableId (0 s)
86: BadColumnName (0 s)
86: BadTableId (0 s)
86: DuplicateColumnName (0 s)
86: DuplicateColumnId (0 s)
86: NoOpenStreamEvent (0 s)
86: NoCloseStreamEvent (0 s)
86: NoColumns (0 s)
86: SoftwareName (0 s)
86: SoftwareName_BadVersion (0 s)
86: DBAddDatabase (0 s)
86: DBAddSubDatabase (0 s)
86: DBAddTable (0 s)
86: DBAddTableToSubDb (0 s)
86: DBMetadataNode (0 s)
86: SubDBMetadataNode (0 s)
86: TblMetadataNode (0 s)
86: ColMetadataNode (0 s)
86: NoData (0 s)
86: Chunk_BadColumnId (0 s)
86: WriteNoCommit (0 s)
86: CommitBadTableId (0 s)
86: OneColumnOneCellOneChunk (0 s)
86: OneColumnOneCellOneChunk_Long (0 s)
86: OneColumnOneCellManyChunks (0 s)
86: IntegerCompression_MinimumCompression (0 s)
86: IntegerCompression_MaximumCompression (0 s)
86: IntegerCompression_MultipleValues (0 s)
86: OneColumnDefaultNoWrite (0 s)
86: OneColumnDefaultNoWrite_Long (0 s)
86: MoveAhead (0 s)
86: OneColumnDefaultOverwite (0 s)
86: OneColumnChangeDefault (0 s)
86: OneColumnDataAndDefaultsMixed (0 s)
86: TwoColumnsFullRow (0 s)
86: TwoColumnsIncompleteRow (0 s)
86: TwoColumnsPartialRowWithDefaults (0 s)
86: TwoColumnsPartialRowWithDefaultsAndOverride (0 s)
86: EmptyDefault_String (0 s)
86: EmptyDefault_Int (0 s)
86: MultipleTables_Multiple_Columns_MultipleRows (0 s)
86: AdditionalSchemaIncludePaths_Single (0 s)
86: AdditionalSchemaIncludePaths_Multiple (0 s)
86: AdditionalSchemaFiles_Single (0 s)
86: AdditionalSchemaFiles_Multiple (0 s)
86: ErrorMessage (0 s)
86: ErrorMessage_Long (0 s)
86: LogMessage (0 s)
86: ProgressMessage (0 s)
86: TargetOverride (0 s)
86: 
86: *** No errors detected (0 s total)
 28/187 Test  #86: GeneralLoaderWhiteBox .............................   Passed    0.34 sec
test 87
        Start  87: GWDumper

87: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/test-gw-dumper
87: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test
87: Test timeout computed to be: 1500
 29/187 Test  #87: GWDumper ..........................................   Passed    0.01 sec
test 88
        Start  88: makeinputs

88: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/makeinputs
88: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test
88: Test timeout computed to be: 1500
 30/187 Test  #88: makeinputs ........................................   Passed    0.01 sec
test 89
        Start  89: GeneralLoader-1.0-Basic-Unpacked

89: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test" "1" "0" "-I/usr/include/ncbi-vdb"
89: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test
89: Test timeout computed to be: 1500
89: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test 1 0 -I/usr/include/ncbi-vdb
89: running test case 1
89: cat input/1.gl | /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader -I/usr/include/ncbi-vdb 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/1/load.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/1/load.stderr
89: Load succeeded, dumping and matching stdout
89: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/1/db 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/1/dump.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/1/dump.stderr
 31/187 Test  #89: GeneralLoader-1.0-Basic-Unpacked ..................   Passed    0.36 sec
test 90
        Start  90: GeneralLoader-1.1-Basic-Packed

90: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test" "1packed" "0" "-I/usr/include/ncbi-vdb"
90: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test
90: Test timeout computed to be: 1500
90: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test 1packed 0 -I/usr/include/ncbi-vdb
90: running test case 1packed
90: cat input/1packed.gl | /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader -I/usr/include/ncbi-vdb 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/1packed/load.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/1packed/load.stderr
90: Load succeeded, dumping and matching stdout
90: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/1packed/db 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/1packed/dump.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/1packed/dump.stderr
 32/187 Test  #90: GeneralLoader-1.1-Basic-Packed ....................   Passed    0.36 sec
test 91
        Start  91: GeneralLoader-1.2-TargetDbOverride

91: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test" "1override" "0" "-I/usr/include/ncbi-vdb --target actual/1override/db"
91: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test
91: Test timeout computed to be: 1500
91: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test 1override 0 -I/usr/include/ncbi-vdb --target actual/1override/db
91: running test case 1override
91: cat input/1override.gl | /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader -I/usr/include/ncbi-vdb --target actual/1override/db 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/1override/load.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/1override/load.stderr
91: Load succeeded, dumping and matching stdout
91: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/1override/db 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/1override/dump.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/1override/dump.stderr
 33/187 Test  #91: GeneralLoader-1.2-TargetDbOverride ................   Passed    0.35 sec
test 92
        Start  92: GeneralLoader-1.3-TargetDbOverrideShorthand

92: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test" "1override" "0" "-I/usr/include/ncbi-vdb -T actual/1override/db"
92: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test
92: Test timeout computed to be: 1500
92: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test 1override 0 -I/usr/include/ncbi-vdb -T actual/1override/db
92: running test case 1override
92: cat input/1override.gl | /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader -I/usr/include/ncbi-vdb -T actual/1override/db 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/1override/load.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/1override/load.stderr
92: Load succeeded, dumping and matching stdout
92: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/1override/db 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/1override/dump.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/1override/dump.stderr
 34/187 Test  #92: GeneralLoader-1.3-TargetDbOverrideShorthand .......   Passed    0.30 sec
test 93
        Start  93: GeneralLoader-2.0-ErrorMessageEvent-Unpacked

93: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test" "2" "3" "-I/usr/include/ncbi-vdb -L=err"
93: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test
93: Test timeout computed to be: 1500
93: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test 2 3 -I/usr/include/ncbi-vdb -L=err
93: running test case 2
93: cat input/2.gl | /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader -I/usr/include/ncbi-vdb -L=err 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/2/load.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/2/load.stderr
93: Load failed as expected, matching stderr
 35/187 Test  #93: GeneralLoader-2.0-ErrorMessageEvent-Unpacked ......   Passed    0.19 sec
test 94
        Start  94: GeneralLoader-2.1-ErrorMessageEvent-Packed

94: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test" "2packed" "3" "-I/usr/include/ncbi-vdb -L=err"
94: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test
94: Test timeout computed to be: 1500
94: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test 2packed 3 -I/usr/include/ncbi-vdb -L=err
94: running test case 2packed
94: cat input/2packed.gl | /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader -I/usr/include/ncbi-vdb -L=err 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/2packed/load.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/2packed/load.stderr
94: Load failed as expected, matching stderr
 36/187 Test  #94: GeneralLoader-2.1-ErrorMessageEvent-Packed ........   Passed    0.17 sec
test 95
        Start  95: GeneralLoader-3.0-EmptyDefaultValues-Unpacked

95: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test" "3" "0" "-I/usr/include/ncbi-vdb"
95: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test
95: Test timeout computed to be: 1500
95: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test 3 0 -I/usr/include/ncbi-vdb
95: running test case 3
95: cat input/3.gl | /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader -I/usr/include/ncbi-vdb 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/3/load.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/3/load.stderr
95: Load succeeded, dumping and matching stdout
95: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/3/db 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/3/dump.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/3/dump.stderr
 37/187 Test  #95: GeneralLoader-3.0-EmptyDefaultValues-Unpacked .....   Passed    0.33 sec
test 96
        Start  96: GeneralLoader-3.1-EmptyDefaultValues-Packed

96: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test" "3" "0" "-I/usr/include/ncbi-vdb"
96: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test
96: Test timeout computed to be: 1500
96: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test 3 0 -I/usr/include/ncbi-vdb
96: running test case 3
96: cat input/3.gl | /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader -I/usr/include/ncbi-vdb 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/3/load.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/3/load.stderr
96: Load succeeded, dumping and matching stdout
96: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/3/db 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/3/dump.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/3/dump.stderr
 38/187 Test  #96: GeneralLoader-3.1-EmptyDefaultValues-Packed .......   Passed    0.37 sec
test 97
        Start  97: GeneralLoader-4.0-MoveAheadEvent-Unpacked

97: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test" "4" "0" "-I/usr/include/ncbi-vdb"
97: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test
97: Test timeout computed to be: 1500
97: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test 4 0 -I/usr/include/ncbi-vdb
97: running test case 4
97: cat input/4.gl | /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader -I/usr/include/ncbi-vdb 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/4/load.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/4/load.stderr
97: Load succeeded, dumping and matching stdout
97: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/4/db 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/4/dump.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/4/dump.stderr
 39/187 Test  #97: GeneralLoader-4.0-MoveAheadEvent-Unpacked .........   Passed    0.37 sec
test 98
        Start  98: GeneralLoader-4.1-MoveAheadEvent-Packed

98: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test" "4packed" "0" "-I/usr/include/ncbi-vdb"
98: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test
98: Test timeout computed to be: 1500
98: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test 4packed 0 -I/usr/include/ncbi-vdb
98: running test case 4packed
98: cat input/4packed.gl | /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader -I/usr/include/ncbi-vdb 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/4packed/load.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/4packed/load.stderr
98: Load succeeded, dumping and matching stdout
98: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/4packed/db 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/4packed/dump.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/4packed/dump.stderr
 40/187 Test  #98: GeneralLoader-4.1-MoveAheadEvent-Packed ...........   Passed    0.36 sec
test 99
        Start  99: GeneralLoader-5.0-IntegerConversion

99: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test" "5packed" "0" "-I/usr/include/ncbi-vdb"
99: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test
99: Test timeout computed to be: 1500
99: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test 5packed 0 -I/usr/include/ncbi-vdb
99: running test case 5packed
99: cat input/5packed.gl | /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader -I/usr/include/ncbi-vdb 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/5packed/load.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/5packed/load.stderr
99: Load succeeded, dumping and matching stdout
99: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/5packed/db 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/5packed/dump.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/5packed/dump.stderr
 41/187 Test  #99: GeneralLoader-5.0-IntegerConversion ...............   Passed    0.36 sec
test 100
        Start 100: GeneralLoader-6.0-SoftwareName-Unpacked

100: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test" "6" "0" "-L=info -I/usr/include/ncbi-vdb" "SOFTWARE/formatter"
100: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test
100: Test timeout computed to be: 1500
100: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test 6 0 -L=info -I/usr/include/ncbi-vdb SOFTWARE/formatter
100: running test case 6
100: cat input/6.gl | /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader -L=info -I/usr/include/ncbi-vdb 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/6/load.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/6/load.stderr
100: Load succeeded, dumping and matching stdout
100: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/6/db SOFTWARE/formatter 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/6/dump.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/6/dump.stderr
 42/187 Test #100: GeneralLoader-6.0-SoftwareName-Unpacked ...........   Passed    0.23 sec
test 101
        Start 101: GeneralLoader-6.1-SoftwareName-Packed

101: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test" "6packed" "0" "-L=info -I/usr/include/ncbi-vdb" "SOFTWARE/formatter"
101: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test
101: Test timeout computed to be: 1500
101: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/runtestcase.sh /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test 6packed 0 -L=info -I/usr/include/ncbi-vdb SOFTWARE/formatter
101: running test case 6packed
101: cat input/6packed.gl | /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader -L=info -I/usr/include/ncbi-vdb 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/6packed/load.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/6packed/load.stderr
101: Load succeeded, dumping and matching stdout
101: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/6packed/db SOFTWARE/formatter 1>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/6packed/dump.stdout 2>/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/actual/6packed/dump.stderr
 43/187 Test #101: GeneralLoader-6.1-SoftwareName-Packed .............   Passed    0.21 sec
test 102
        Start 102: bio-end-makeinputs

102: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/bio-end-makeinputs
102: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema
102: Test timeout computed to be: 1500
 44/187 Test #102: bio-end-makeinputs ................................   Passed    0.00 sec
test 103
        Start 103: BioEnd-Excl-1

103: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema" "bio-end" "excl-1" "0" "n" "-I/usr/include/ncbi-vdb" "-L=debug"
103: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema
103: Test timeout computed to be: 1500
103: running test bio-end:excl-1
 45/187 Test #103: BioEnd-Excl-1 .....................................   Passed    0.22 sec
test 104
        Start 104: BioEnd-Excl-2

104: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema" "bio-end" "excl-2" "0" "n" "-I/usr/include/ncbi-vdb"
104: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema
104: Test timeout computed to be: 1500
104: running test bio-end:excl-2
 46/187 Test #104: BioEnd-Excl-2 .....................................   Passed    0.19 sec
test 105
        Start 105: BioEnd-Excl-3

105: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema" "bio-end" "excl-3" "0" "n" "-I/usr/include/ncbi-vdb"
105: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema
105: Test timeout computed to be: 1500
105: running test bio-end:excl-3
 47/187 Test #105: BioEnd-Excl-3 .....................................   Passed    0.23 sec
test 106
        Start 106: BioEnd-Excl-4

106: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema" "bio-end" "excl-4" "0" "n" "-I/usr/include/ncbi-vdb"
106: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema
106: Test timeout computed to be: 1500
106: running test bio-end:excl-4
 48/187 Test #106: BioEnd-Excl-4 .....................................   Passed    0.23 sec
test 107
        Start 107: BioEnd-Incl-1

107: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema" "bio-end" "incl-1" "0" "n" "-I/usr/include/ncbi-vdb"
107: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema
107: Test timeout computed to be: 1500
107: running test bio-end:incl-1
 49/187 Test #107: BioEnd-Incl-1 .....................................   Passed    0.23 sec
test 108
        Start 108: IdxText-CI-1

108: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema" "bio-end" "excl-1" "0" "n" "-I/usr/include/ncbi-vdb"
108: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema
108: Test timeout computed to be: 1500
108: running test bio-end:excl-1
 50/187 Test #108: IdxText-CI-1 ......................................   Passed    0.23 sec
test 109
        Start 109: idx-text-makeinputs

109: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/idx-text-makeinputs
109: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema
109: Test timeout computed to be: 1500
 51/187 Test #109: idx-text-makeinputs ...............................   Passed    0.00 sec
test 110
        Start 110: IdxText-ci-1

110: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema" "idx-text" "ci-1" "0" "y" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/idx-text-checklookup" "-I/usr/include/ncbi-vdb"
110: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema
110: Test timeout computed to be: 1500
110: running test idx-text:ci-1
 52/187 Test #110: IdxText-ci-1 ......................................   Passed    0.23 sec
test 111
        Start 111: IdxText-ci-2

111: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema" "idx-text" "ci-2" "0" "y" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/idx-text-checklookup" "-I/usr/include/ncbi-vdb"
111: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema
111: Test timeout computed to be: 1500
111: running test idx-text:ci-2
 53/187 Test #111: IdxText-ci-2 ......................................   Passed    0.27 sec
test 112
        Start 112: IdxText-ci-3

112: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema" "idx-text" "ci-3" "0" "y" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/idx-text-checklookup" "-I/usr/include/ncbi-vdb"
112: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema
112: Test timeout computed to be: 1500
112: running test idx-text:ci-3
 54/187 Test #112: IdxText-ci-3 ......................................   Passed    0.27 sec
test 113
        Start 113: IdxText-ci-4

113: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema" "idx-text" "ci-4" "0" "y" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/idx-text-checklookup" "-I/usr/include/ncbi-vdb"
113: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema
113: Test timeout computed to be: 1500
113: running test idx-text:ci-4
 55/187 Test #113: IdxText-ci-4 ......................................   Passed    0.24 sec
test 114
        Start 114: IdxText-ci-5

114: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema" "idx-text" "ci-5" "0" "n" "-I/usr/include/ncbi-vdb"
114: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema
114: Test timeout computed to be: 1500
114: running test idx-text:ci-5
 56/187 Test #114: IdxText-ci-5 ......................................   Passed    0.19 sec
test 115
        Start 115: IdxText-cs-1

115: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema" "idx-text" "cs-1" "0" "y" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/idx-text-checklookup" "-I/usr/include/ncbi-vdb"
115: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema
115: Test timeout computed to be: 1500
115: running test idx-text:cs-1
 57/187 Test #115: IdxText-cs-1 ......................................   Passed    0.27 sec
test 116
        Start 116: IdxText-cs-2

116: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema" "idx-text" "cs-2" "0" "y" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/idx-text-checklookup" "-I/usr/include/ncbi-vdb"
116: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema
116: Test timeout computed to be: 1500
116: running test idx-text:cs-2
 58/187 Test #116: IdxText-cs-2 ......................................   Passed    0.24 sec
test 117
        Start 117: IdxText-cs-3

117: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema" "idx-text" "cs-3" "0" "n" "-I/usr/include/ncbi-vdb"
117: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/loaders/general-loader/test/vschema
117: Test timeout computed to be: 1500
117: running test idx-text:cs-3
 59/187 Test #117: IdxText-cs-3 ......................................   Passed    0.19 sec
test 118
        Start 118: PileupStats-Version

118: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats -V |
        grep --quiet `head -n 1 /build/reproducible-path/sra-sdk-3.0.9+dfsg/shared/toolkit.vers`"
118: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats/test
118: Test timeout computed to be: 1500
 60/187 Test #118: PileupStats-Version ...............................   Passed    0.01 sec
test 119
        Start 119: PileupStats-Help

119: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats -h | grep --quiet Usage"
119: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats/test
119: Test timeout computed to be: 1500
 61/187 Test #119: PileupStats-Help ..................................   Passed    0.01 sec
test 120
        Start 120: PileupStats-NoArgs

120: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats; if [ $? == 0 ] ; then exit 1; fi;"
120: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats/test
120: Test timeout computed to be: 1500
120: 
120: Usage:
120:   pileup-stats [options] <accession>
120: 
120: Options:
120:   -o|--output-file                 file for output
120:                                    (default pipe to stdout)
120:   -r|--remote-db                   name of remote database to create
120:                                    (default <accession>.pileup_stat)
120:   -x|--depth-cutoff                cutoff for depth <= value (default 1)
120:   -e|--event-cutoff                cutoff for number of events > value (default 1)
120:   -p|--num-significant-bits        number of significant bits for depth and counts to store (default 4)
120:   -a|--align-category              the types of alignments to pile up:
120:                                    { primary, secondary, all } (default primary)
120:   --buffer-size bytes              size of output pipe buffer - default 32K bytes
120:   -U|--unpack-integer              don't pack integers in output pipe - uses more bandwidth
120:   -h|--help                        output brief explanation of the program
120:   -v|--verbose                     increase the verbosity of the program.
120:   -V|--version                     display the version of the program then quit.
120:                                    use multiple times for more verbosity.
120:   --log-stderr                     log via stderr rather than general-writer API (default - general-writer API)
120: 
120: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats : 3.0.9
120: 
120: /usr/bin/sh: 1: [: 3: unexpected operator
 62/187 Test #120: PileupStats-NoArgs ................................   Passed    0.01 sec
test 121
        Start 121: PileupStats-IgnoreArgs-L

121: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats -L 1; if [ $? == 0 ] ; then exit 1; fi;"
121: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats/test
121: Test timeout computed to be: 1500
121: 
121: Usage:
121:   pileup-stats [options] <accession>
121: 
121: Options:
121:   -o|--output-file                 file for output
121:                                    (default pipe to stdout)
121:   -r|--remote-db                   name of remote database to create
121:                                    (default <accession>.pileup_stat)
121:   -x|--depth-cutoff                cutoff for depth <= value (default 1)
121:   -e|--event-cutoff                cutoff for number of events > value (default 1)
121:   -p|--num-significant-bits        number of significant bits for depth and counts to store (default 4)
121:   -a|--align-category              the types of alignments to pile up:
121:                                    { primary, secondary, all } (default primary)
121:   --buffer-size bytes              size of output pipe buffer - default 32K bytes
121:   -U|--unpack-integer              don't pack integers in output pipe - uses more bandwidth
121:   -h|--help                        output brief explanation of the program
121:   -v|--verbose                     increase the verbosity of the program.
121:   -V|--version                     display the version of the program then quit.
121:                                    use multiple times for more verbosity.
121:   --log-stderr                     log via stderr rather than general-writer API (default - general-writer API)
121: 
121: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats : 3.0.9
121: 
121: /usr/bin/sh: 1: [: 3: unexpected operator
 63/187 Test #121: PileupStats-IgnoreArgs-L ..........................   Passed    0.01 sec
test 122
        Start 122: PileupStats-IgnoreArgs-z

122: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats -z ignore.txt; if [ $? == 0 ] ; then exit 1; fi;"
122: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats/test
122: Test timeout computed to be: 1500
122: 
122: Usage:
122:   pileup-stats [options] <accession>
122: 
122: Options:
122:   -o|--output-file                 file for output
122:                                    (default pipe to stdout)
122:   -r|--remote-db                   name of remote database to create
122:                                    (default <accession>.pileup_stat)
122:   -x|--depth-cutoff                cutoff for depth <= value (default 1)
122:   -e|--event-cutoff                cutoff for number of events > value (default 1)
122:   -p|--num-significant-bits        number of significant bits for depth and counts to store (default 4)
122:   -a|--align-category              the types of alignments to pile up:
122:                                    { primary, secondary, all } (default primary)
122:   --buffer-size bytes              size of output pipe buffer - default 32K bytes
122:   -U|--unpack-integer              don't pack integers in output pipe - uses more bandwidth
122:   -h|--help                        output brief explanation of the program
122:   -v|--verbose                     increase the verbosity of the program.
122:   -V|--version                     display the version of the program then quit.
122:                                    use multiple times for more verbosity.
122:   --log-stderr                     log via stderr rather than general-writer API (default - general-writer API)
122: 
122: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats : 3.0.9
122: 
122: /usr/bin/sh: 1: [: 3: unexpected operator
 64/187 Test #122: PileupStats-IgnoreArgs-z ..........................   Passed    0.01 sec
test 123
        Start 123: PileupStats-IgnoreArgs-loglevel

123: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats --log-level 1; if [ $? == 0 ] ; then exit 1; fi;"
123: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats/test
123: Test timeout computed to be: 1500
123: 
123: Usage:
123:   pileup-stats [options] <accession>
123: 
123: Options:
123:   -o|--output-file                 file for output
123:                                    (default pipe to stdout)
123:   -r|--remote-db                   name of remote database to create
123:                                    (default <accession>.pileup_stat)
123:   -x|--depth-cutoff                cutoff for depth <= value (default 1)
123:   -e|--event-cutoff                cutoff for number of events > value (default 1)
123:   -p|--num-significant-bits        number of significant bits for depth and counts to store (default 4)
123:   -a|--align-category              the types of alignments to pile up:
123:                                    { primary, secondary, all } (default primary)
123:   --buffer-size bytes              size of output pipe buffer - default 32K bytes
123:   -U|--unpack-integer              don't pack integers in output pipe - uses more bandwidth
123:   -h|--help                        output brief explanation of the program
123:   -v|--verbose                     increase the verbosity of the program.
123:   -V|--version                     display the version of the program then quit.
123:                                    use multiple times for more verbosity.
123:   --log-stderr                     log via stderr rather than general-writer API (default - general-writer API)
123: 
123: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats : 3.0.9
123: 
123: /usr/bin/sh: 1: [: 3: unexpected operator
 65/187 Test #123: PileupStats-IgnoreArgs-loglevel ...................   Passed    0.01 sec
test 124
        Start 124: PileupStats-IgnoreArgs-xmllog

124: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats --xml-log ignore.txt; if [ $? == 0 ] ; then exit 1; fi;"
124: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats/test
124: Test timeout computed to be: 1500
124: 
124: Usage:
124:   pileup-stats [options] <accession>
124: 
124: Options:
124:   -o|--output-file                 file for output
124:                                    (default pipe to stdout)
124:   -r|--remote-db                   name of remote database to create
124:                                    (default <accession>.pileup_stat)
124:   -x|--depth-cutoff                cutoff for depth <= value (default 1)
124:   -e|--event-cutoff                cutoff for number of events > value (default 1)
124:   -p|--num-significant-bits        number of significant bits for depth and counts to store (default 4)
124:   -a|--align-category              the types of alignments to pile up:
124:                                    { primary, secondary, all } (default primary)
124:   --buffer-size bytes              size of output pipe buffer - default 32K bytes
124:   -U|--unpack-integer              don't pack integers in output pipe - uses more bandwidth
124:   -h|--help                        output brief explanation of the program
124:   -v|--verbose                     increase the verbosity of the program.
124:   -V|--version                     display the version of the program then quit.
124:                                    use multiple times for more verbosity.
124:   --log-stderr                     log via stderr rather than general-writer API (default - general-writer API)
124: 
124: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats : 3.0.9
124: 
124: /usr/bin/sh: 1: [: 3: unexpected operator
 66/187 Test #124: PileupStats-IgnoreArgs-xmllog .....................   Passed    0.01 sec
test 125
        Start 125: PileupStats-IgnoreArgs-xmllogfd

125: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats --xml-log-fd ignore.txt; if [ $? == 0 ] ; then exit 1; fi;"
125: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats/test
125: Test timeout computed to be: 1500
125: 
125: Usage:
125:   pileup-stats [options] <accession>
125: 
125: Options:
125:   -o|--output-file                 file for output
125:                                    (default pipe to stdout)
125:   -r|--remote-db                   name of remote database to create
125:                                    (default <accession>.pileup_stat)
125:   -x|--depth-cutoff                cutoff for depth <= value (default 1)
125:   -e|--event-cutoff                cutoff for number of events > value (default 1)
125:   -p|--num-significant-bits        number of significant bits for depth and counts to store (default 4)
125:   -a|--align-category              the types of alignments to pile up:
125:                                    { primary, secondary, all } (default primary)
125:   --buffer-size bytes              size of output pipe buffer - default 32K bytes
125:   -U|--unpack-integer              don't pack integers in output pipe - uses more bandwidth
125:   -h|--help                        output brief explanation of the program
125:   -v|--verbose                     increase the verbosity of the program.
125:   -V|--version                     display the version of the program then quit.
125:                                    use multiple times for more verbosity.
125:   --log-stderr                     log via stderr rather than general-writer API (default - general-writer API)
125: 
125: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats : 3.0.9
125: 
125: /usr/bin/sh: 1: [: 3: unexpected operator
 67/187 Test #125: PileupStats-IgnoreArgs-xmllogfd ...................   Passed    0.01 sec
test 126
        Start 126: test-vdb

126: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/test-vdb
126: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/vdb
126: Test timeout computed to be: 1500
126: Running 38 test cases...
126: Error_RcToString (0 s)
126: Error_RcToString_English (0 s)
126: Manager_Construction (0 s)
126: RC 1426393646 thrown by ./libs/inc/vdb.hpp:239
126: Manager_Schema_Bad (0 s)
126: Manager_Schema_Good (0 s)
126: Manager_Schema_Include (0 s)
126: Manager_SchemaFromFile (0 s)
126: Manager_SchemaFromFile_Bad (0 s)
126: RC 2615477144 thrown by ./libs/inc/vdb.hpp:621
126: Manager_Database_Bad (0 s)
126: Manager_OpenDatabase_Good (0 s)
126: RC 1273301772 thrown by ./libs/inc/vdb.hpp:628
126: Manager_OpenTable_Bad (0 s)
126: Manager_OpenTable_Good (0 s)
126: Manager_PathType_Table (0 s)
126: Manager_PathType_Database (0 s)
126: Manager_PathType_Invalid (1 s)
126: RC 807538648 thrown by ./libs/inc/vdb.hpp:551
126: Database_Table_Bad (0 s)
126: Database_Table_Good (0 s)
126: Database_hasTable_Yes (0 s)
126: Database_hasTable_No (0 s)
126: Table_Default (0 s)
126: Table_Assign (0 s)
126: RC 1367638680 thrown by ./libs/inc/vdb.hpp:437
126: Table_ReadCursor1_BadColumn (0 s)
126: Table_ReadCursor1 (0 s)
126: RC 1367638680 thrown by ./libs/inc/vdb.hpp:470
126: Table_ReadCursor2_BadColumn (0 s)
126: Table_ReadCursor2 (0 s)
126: Table_PhysicaColumns (0 s)
126: Cursor_Columns (0 s)
126: Cursor_RowRange (0 s)
126: Cursor_ReadOne (0 s)
126: Cursor_ReadN (0 s)
126: Cursor_ForEach (0 s)
126: Cursor_ForEachWithFilter (0 s)
126: Cursor_IsStaticColumn_True (0 s)
126: Cursor_IsStaticColumn_False (0 s)
126: RawData_asVector_badCast (0 s)
126: RawData_asVector (0 s)
126: RawData_value_badCast (0 s)
126: RawData_value (0 s)
126: 
126: *** No errors detected (2 s total)
 68/187 Test #126: test-vdb ..........................................   Passed    2.15 sec
test 127
        Start 127: Test_NgsJava_lib_load

127: Test command: /usr/bin/java "-cp" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib/test-ngs-java.jar:/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/lib/ngs-java.jar:/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/ngs/ngs-java/junit-4.11.jar" "-Dvdb.System.loadLibrary=1" "-Dvdb.log=FINEST" "org.junit.runner.JUnitCore" "gov.nih.nlm.ncbi.ngs.ngs_test_lib_load"
127: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/ngs/ngs-java
127: Test timeout computed to be: 1500
127: JUnit version 4.11
127: .........
127: Time: 0.063
127: 
127: OK (9 tests)
127: 
 69/187 Test #127: Test_NgsJava_lib_load .............................   Passed    0.28 sec
test 131
        Start 131: Test_Align_Info

131: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/align-info "-h"
131: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/align-info
131: Test timeout computed to be: 1500
131: Usage:
131:   align-info [options] <db-path>
131: 
131: Summary:
131:   Print database alignment information
131: 
131: Parameters:
131:   db-path                          Path to the database
131: 
131: Options:
131:   -a|--all                         print all information 
131:   -r|--ref                         print refseq information [default] 
131:   -b|--bam                         print bam header (if present) 
131:   -Q|--qual                        print quality statistics (if present) 
131:   -H|--headers                     print headers for output blocks 
131:   --ngc <path>                     path to ngc file 
131: 
131:   -h|--help                        Output brief explanation for the program. 
131:   -V|--version                     Display the version of the program then 
131:                                    quit. 
131:   -L|--log-level <level>           Logging level as number or enum string. One 
131:                                    of (fatal|sys|int|err|warn|info|debug) or 
131:                                    (0-6) Current/default is warn. 
131:   -v|--verbose                     Increase the verbosity of the program 
131:                                    status messages. Use multiple times for more 
131:                                    verbosity. Negates quiet. 
131:   -q|--quiet                       Turn off all status messages for the 
131:                                    program. Negated by verbose. 
131:   --option-file <file>             Read more options and parameters from the 
131:                                    file. 
131: 
131: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/align-info : 3.0.9
131: 
 70/187 Test #131: Test_Align_Info ...................................   Passed    0.01 sec
test 132
        Start 132: Test_Drivertool_BuildVersion

132: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Drivertool_BuildVersion
132: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool
132: Test timeout computed to be: 1500
132: Test_Version passed.
 71/187 Test #132: Test_Drivertool_BuildVersion ......................   Passed    0.00 sec
test 133
        Start 133: Test_Drivertool_FilePath

133: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Drivertool_FilePath
133: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool
133: Test timeout computed to be: 1500
133: Running 27 test cases...
133: DefaultConstruct (0 s)
133: Construct_Cstring (0 s)
133: Construct_String (0 s)
133: CopyConstruct_Empty (0 s)
133: CopyConstruct (0 s)
133: Assign_Empty (0 s)
133: Assign (0 s)
133: Copy (0 s)
133: Split (0 s)
133: BaseName (0 s)
133: Append (0 s)
133: RemoveSuffix_0 (0 s)
133: RemoveSuffix (0 s)
133: RemoveSuffix_Ext (0 s)
133: RemoveSuffix_Oversized (0 s)
133: SimpleName (0 s)
133: CWD (0 s)
133: Exists (0 s)
133: CWD_Append (0 s)
133: Exists_Static (0 s)
133: Readable (0 s)
133: IsSame_Directory (0 s)
133: NotIsSame_Directory (0 s)
133: IsSame_File (0 s)
133: NotIsSame_File (0 s)
133: Current_Executable (0 s)
133: Executable_Yes (0 s)
133: 
133: *** No errors detected (0 s total)
 72/187 Test #133: Test_Drivertool_FilePath ..........................   Passed    0.01 sec
test 134
        Start 134: Test_Drivertool_CommandLine

134: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Drivertool_CommandLine
134: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool
134: Test timeout computed to be: 1500
134: Test_CommandLine passed.
 73/187 Test #134: Test_Drivertool_CommandLine .......................   Passed    0.00 sec
test 135
        Start 135: Test_Drivertool_JsonParsing

135: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Drivertool_JsonParsing
135: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool
135: Test timeout computed to be: 1500
 74/187 Test #135: Test_Drivertool_JsonParsing .......................   Passed    0.03 sec
test 136
        Start 136: Test_Drivertool_SDLResponse

136: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Drivertool_SDLResponse
136: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool
136: Test timeout computed to be: 1500
 75/187 Test #136: Test_Drivertool_SDLResponse .......................   Passed    0.01 sec
test 137
        Start 137: Test_Drivertool_Accession

137: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Drivertool_Accession
137: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool
137: Test timeout computed to be: 1500
 76/187 Test #137: Test_Drivertool_Accession .........................   Passed    0.00 sec
test 138
        Start 138: Test_Drivertool_UUID

138: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Drivertool_UUID
138: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool
138: Test timeout computed to be: 1500
 77/187 Test #138: Test_Drivertool_UUID ..............................   Passed    0.22 sec
test 139
        Start 139: Test_Drivertool_RunSource

139: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Drivertool_RunSource
139: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool
139: Test timeout computed to be: 1500
139: Running 18 test cases...
139: CopmmandLine_GetToolPath (0 s)
139: CommandLine_Defaults (0 s)
139: UnknownTool (0 s)
139: URL_parameter (0 s)
139: ConstructNoSDL (0 s)
139: ConstructSDL_false (0 s)
139: ConstructSDL_true (0 s)
139: ConstructSDL_badSDL (0 s)
139: ConstructSDL_noResults (0 s)
139: ConstructSDL_oneResult (0 s)
139: ConstructSDL_multipleFiles (0 s)
139: ConstructSDL_multipleLocations (0 s)
139: Query SRR000001: Error 400 no data
139: ConstructSDL_status_400 (0 s)
139: ConstructSDL_status_404 (0 s)
139: No usable source for SRR000001 was found.
139: SRR000001 might be available in a different cloud provider or region.
139: ConstructSDL_pileupIgnored (0 s)
139: No usable source for SRR000001 was found.
139: SRR000001 might be available in a different cloud provider or region.
139: ConstructSDL_noObject_Ignored (0 s)
139: No usable source for SRR000001 was found.
139: SRR000001 might be available in a different cloud provider or region.
139: ConstructSDL_noQuality_Ignored (0 s)
139: No usable source for SRR000001 was found.
139: SRR000001 might be available in a different cloud provider or region.
139: ConstructSDL_Encrypted_NoNGC_Skipped (0 s)
139: 
139: *** No errors detected (0 s total)
 78/187 Test #139: Test_Drivertool_RunSource .........................   Passed    0.01 sec
test 140
        Start 140: Test_Drivertool_ToolArgs

140: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Drivertool_ToolArgs
140: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/driver-tool
140: Test timeout computed to be: 1500
140: Running 1 test case...
140: ParseArgs (0 s)
140: 
140: *** No errors detected (0 s total)
 79/187 Test #140: Test_Drivertool_ToolArgs ..........................   Passed    0.01 sec
test 141
        Start 141: Test_FasterqDump_Help

141: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/fasterq-dump "-h"
141: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/fasterq-dump
141: Test timeout computed to be: 1500
141: 
141: Usage:
141:   fasterq-dump <path> [options]
141:   fasterq-dump <accession> [options]
141: 
141: Options:
141:   -F|--format                      format (special, fastq, default=fastq) 
141:   -o|--outfile                     output-file 
141:   -O|--outdir                      output-dir 
141:   -b|--bufsize                     size of file-buffer dflt=1MB 
141:   -c|--curcache                    size of cursor-cache dflt=10MB 
141:   -m|--mem                         memory limit for sorting dflt=100MB 
141:   -t|--temp                        where to put temp. files dflt=curr dir 
141:   -e|--threads                     how many thread dflt=6 
141:   -p|--progress                    show progress 
141:   -x|--details                     print details 
141:   -s|--split-spot                  split spots into reads 
141:   -S|--split-files                 write reads into different files 
141:   -3|--split-3                     writes single reads in special file 
141:   --concatenate-reads              writes whole spots into one file 
141:   -Z|--stdout                      print output to stdout 
141:   -f|--force                       force to overwrite existing file(s) 
141:   --skip-technical                 skip technical reads 
141:   --include-technical              include technical reads 
141:   -M|--min-read-len                filter by sequence-len 
141:   --table                          which seq-table to use in case of pacbio 
141:   -B|--bases                       filter by bases 
141:   -A|--append                      append to output-file 
141:   --fasta                          produce FASTA output 
141:   --fasta-unsorted                 produce FASTA output, unsorted 
141:   --fasta-ref-tbl                  produce FASTA output from REFERENCE tbl 
141:   --fasta-concat-all               concatenate all rows and produce FASTA 
141:   --internal-ref                   extract only internal REFERENCEs 
141:   --external-ref                   extract only external REFERENCEs 
141:   --ref-name                       extract only these REFERENCEs 
141:   --ref-report                     enumerate references 
141:   --use-name                       print name instead of seq-id 
141:   --seq-defline                    custom defline for sequence:  $ac=accession, 
141:                                    $sn=spot-name,  $sg=spot-group, $si=spot-id,  
141:                                    $ri=read-id, $rl=read-length 
141:   --qual-defline                   custom defline for qualities:  same as 
141:                                    seq-defline 
141:   -U|--only-unaligned              process only unaligned reads 
141:   -a|--only-aligned                process only aligned reads 
141:   --disk-limit                     explicitly set disk-limit 
141:   --disk-limit-tmp                 explicitly set disk-limit for temp. files 
141:   --size-check                     switch to control: on=perform size-check 
141:                                    (default),  off=do not perform size-check,  
141:                                    only=perform size-check only 
141:   --ngc <PATH>                     PATH to ngc file 
141: 
141:   -h|--help                        Output brief explanation for the program. 
141:   -V|--version                     Display the version of the program then 
141:                                    quit. 
141:   -L|--log-level <level>           Logging level as number or enum string. One 
141:                                    of (fatal|sys|int|err|warn|info|debug) or 
141:                                    (0-6) Current/default is warn. 
141:   -v|--verbose                     Increase the verbosity of the program 
141:                                    status messages. Use multiple times for more 
141:                                    verbosity. Negates quiet. 
141:   -q|--quiet                       Turn off all status messages for the 
141:                                    program. Negated by verbose. 
141:   --option-file <file>             Read more options and parameters from the 
141:                                    file. 
141: for more information visit:
141:    https://github.com/ncbi/sra-tools/wiki/HowTo:-fasterq-dump
141:    https://github.com/ncbi/sra-tools/wiki/08.-prefetch-and-fasterq-dump
141: 
141: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/fasterq-dump : 3.0.9
141: 
 80/187 Test #141: Test_FasterqDump_Help .............................   Passed    0.01 sec
test 142
        Start 142: Test_FasterqDump_NotZeroWithoutParameters

142: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/fasterq-dump
142: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/fasterq-dump
142: Test timeout computed to be: 1500
142: 
142: Usage:
142:   fasterq-dump <path> [options]
142:   fasterq-dump <accession> [options]
142: 
142: Options:
142:   -F|--format                      format (special, fastq, default=fastq) 
142:   -o|--outfile                     output-file 
142:   -O|--outdir                      output-dir 
142:   -b|--bufsize                     size of file-buffer dflt=1MB 
142:   -c|--curcache                    size of cursor-cache dflt=10MB 
142:   -m|--mem                         memory limit for sorting dflt=100MB 
142:   -t|--temp                        where to put temp. files dflt=curr dir 
142:   -e|--threads                     how many thread dflt=6 
142:   -p|--progress                    show progress 
142:   -x|--details                     print details 
142:   -s|--split-spot                  split spots into reads 
142:   -S|--split-files                 write reads into different files 
142:   -3|--split-3                     writes single reads in special file 
142:   --concatenate-reads              writes whole spots into one file 
142:   -Z|--stdout                      print output to stdout 
142:   -f|--force                       force to overwrite existing file(s) 
142:   --skip-technical                 skip technical reads 
142:   --include-technical              include technical reads 
142:   -M|--min-read-len                filter by sequence-len 
142:   --table                          which seq-table to use in case of pacbio 
142:   -B|--bases                       filter by bases 
142:   -A|--append                      append to output-file 
142:   --fasta                          produce FASTA output 
142:   --fasta-unsorted                 produce FASTA output, unsorted 
142:   --fasta-ref-tbl                  produce FASTA output from REFERENCE tbl 
142:   --fasta-concat-all               concatenate all rows and produce FASTA 
142:   --internal-ref                   extract only internal REFERENCEs 
142:   --external-ref                   extract only external REFERENCEs 
142:   --ref-name                       extract only these REFERENCEs 
142:   --ref-report                     enumerate references 
142:   --use-name                       print name instead of seq-id 
142:   --seq-defline                    custom defline for sequence:  $ac=accession, 
142:                                    $sn=spot-name,  $sg=spot-group, $si=spot-id,  
142:                                    $ri=read-id, $rl=read-length 
142:   --qual-defline                   custom defline for qualities:  same as 
142:                                    seq-defline 
142:   -U|--only-unaligned              process only unaligned reads 
142:   -a|--only-aligned                process only aligned reads 
142:   --disk-limit                     explicitly set disk-limit 
142:   --disk-limit-tmp                 explicitly set disk-limit for temp. files 
142:   --size-check                     switch to control: on=perform size-check 
142:                                    (default),  off=do not perform size-check,  
142:                                    only=perform size-check only 
142:   --ngc <PATH>                     PATH to ngc file 
142: 
142:   -h|--help                        Output brief explanation for the program. 
142:   -V|--version                     Display the version of the program then 
142:                                    quit. 
142:   -L|--log-level <level>           Logging level as number or enum string. One 
142:                                    of (fatal|sys|int|err|warn|info|debug) or 
142:                                    (0-6) Current/default is warn. 
142:   -v|--verbose                     Increase the verbosity of the program 
142:                                    status messages. Use multiple times for more 
142:                                    verbosity. Negates quiet. 
142:   -q|--quiet                       Turn off all status messages for the 
142:                                    program. Negated by verbose. 
142:   --option-file <file>             Read more options and parameters from the 
142:                                    file. 
142: for more information visit:
142:    https://github.com/ncbi/sra-tools/wiki/HowTo:-fasterq-dump
142:    https://github.com/ncbi/sra-tools/wiki/08.-prefetch-and-fasterq-dump
142: 
142: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/fasterq-dump : 3.0.9
142: 
 81/187 Test #142: Test_FasterqDump_NotZeroWithoutParameters .........   Passed    0.01 sec
test 143
        Start 143: Test_FasterDump_Fasta_unsorted_flat_tbl_read_id

143: Test command: /usr/bin/bash "test_for_read_id_flat.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin"
143: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/fasterq-dump
143: Test timeout computed to be: 1500
143: spots read      : 10
143: reads read      : 20
143: reads written   : 20
143: READ_ID1: 10
143: READ_ID2: 10
143: success testing read-id for --fasta-unsorted mode on flat table
 82/187 Test #143: Test_FasterDump_Fasta_unsorted_flat_tbl_read_id ...   Passed    0.27 sec
test 144
        Start 144: Test_FasterDump_Fasta_unsorted_cSRA_read_id

144: Test command: /usr/bin/cmake "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/fasterq-dump" "bash" "-c" "echo 'vdb/schema/paths = "/usr/include/ncbi-vdb"' > tmp.kfg; ./test_for_read_id_cSRA.sh /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin"
144: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/fasterq-dump
144: Test timeout computed to be: 1500
144: spots read      : 10
144: reads read      : 20
144: reads written   : 20
144: READ_ID1: 10
144: READ_ID2: 10
144: success testing read-id for --fasta-unsorted mode on cSRA table
 83/187 Test #144: Test_FasterDump_Fasta_unsorted_cSRA_read_id .......   Passed    0.57 sec
test 145
        Start 145: Test_Tiny_cSRA

145: Test command: /usr/bin/cmake "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/fasterq-dump" "bash" "-c" "echo 'vdb/schema/paths = "/usr/include/ncbi-vdb"' > tmp.kfg; ./tiny_csra.sh /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin"
145: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/fasterq-dump
145: Test timeout computed to be: 1500
145: 
145: testing /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/fasterq-dump on tiny cSRA-accession
145: spots read      : 3
145: reads read      : 3
145: reads written   : 3
 84/187 Test #145: Test_Tiny_cSRA ....................................   Passed    0.89 sec
test 159
        Start 159: SamDumpTestSetup

159: Test command: /usr/bin/bash "-c" "echo 'vdb/schema/paths = "/usr/include/ncbi-vdb"
/LIBS/GUID="8test002-6ab7-41b2-bfd0-sam-dump-test"' > tmp.kfg"
159: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sam-dump
159: Test timeout computed to be: 1500
 85/187 Test #159: SamDumpTestSetup ..................................   Passed    0.00 sec
test 160
        Start 160: Test_sam_dump_verify_omit

160: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sam-dump" "./verify_omit_qual.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin"
160: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sam-dump
160: Test timeout computed to be: 1500
 86/187 Test #160: Test_sam_dump_verify_omit .........................   Passed    1.35 sec
test 161
        Start 161: Test_sam_dump_star_quality

161: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sam-dump" "./print_star_on_missing_qual.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin"
161: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sam-dump
161: Test timeout computed to be: 1500
 87/187 Test #161: Test_sam_dump_star_quality ........................   Passed    0.91 sec
test 162
        Start 162: Test_Srapath_Check_exit_code

162: Test command: /usr/bin/cmake "-E" "env" "VDB_CONFIG=../.." "/usr/bin/python3" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/build/check-exit-code.py" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/srapath"
162: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/srapath
162: Test timeout computed to be: 1500
162: [check-exit-code.py] test passed for [/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/srapath]
 88/187 Test #162: Test_Srapath_Check_exit_code ......................   Passed    0.10 sec
test 164
        Start 164: Test_SraPileup_Check_exit_code

164: Test command: /usr/bin/cmake "-E" "env" "VDB_CONFIG=.." "/usr/bin/python3" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/build/check-exit-code.py" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-pileup"
164: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-pileup
164: Test timeout computed to be: 1500
164: WARNING[TEST1] help message is in 'STDOUT'
164: [check-exit-code.py] test passed for [/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-pileup]
 89/187 Test #164: Test_SraPileup_Check_exit_code ....................   Passed    0.18 sec
test 168
        Start 168: Test_VDB_Config_model

168: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/vdb-config/model.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/test-vdb-config-model"
168: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/vdb-config
168: Test timeout computed to be: 1500
168: testing /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/test-vdb-config-model
168: Running 11 test cases...
168: get_config_changed (0 s)
168: prefetch_download_to_cache (0 s)
168: user_accept_aws_charges (0 s)
168: user_accept_gcp_charges (0 s)
168: ./test/external/vdb-config/test-vdb-config-model.cpp:92: fatal error in "temp_cache_location": critical check string ( "path" ) == m . get_temp_cache_location() failed [path != /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/vdb-config/path]
168: temp_cache_location (0 s)
168: gcp_credential_file_location (0 s)
168: aws_credential_file_location (0 s)
168: aws_profile (0 s)
168: noCommit (0 s)
168: Commit (0 s)
168: Reload (0 s)
168: 
168: *** 1 failure detected in test suite "VdbConfStridesModelTestSuite"
168: VDB Copy model test is finished
 90/187 Test #168: Test_VDB_Config_model .............................   Passed    0.10 sec
test 169
        Start 169: Test_VDB_Config

169: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/vdb-config/test-vdb-config.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin"
169: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/vdb-config
169: Test timeout computed to be: 1500
169: Testing /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-config... 
169: VDB config test is finished
 91/187 Test #169: Test_VDB_Config ...................................   Passed    0.08 sec
test 170
        Start 170: Test_Vdb_dump_Check_exit_code

170: Test command: /usr/bin/cmake "-E" "env" "VDB_CONFIG=.." "/usr/bin/python3" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/build/check-exit-code.py" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump"
170: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/vdb-dump
170: Test timeout computed to be: 1500
170: WARNING[TEST1] help message is in 'STDOUT'
170: [check-exit-code.py] test passed for [/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump]
 92/187 Test #170: Test_Vdb_dump_Check_exit_code .....................   Passed    0.18 sec
test 171
        Start 171: Test_Vdb_dump_view-spec

171: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Vdb_dump_view-spec
171: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/vdb-dump
171: Test timeout computed to be: 1500
171: Running 21 test cases...
171: NullSelf (0 s)
171: NullSpec (0 s)
171: EmptySpec (0 s)
171: NullError (0 s)
171: ZeroSizeError (0 s)
171: MissingLeftAngle (0 s)
171: EmptyAngles (0 s)
171: OneParam (0 s)
171: ManyParams (0 s)
171: MissingComma (0 s)
171: MissingParam (0 s)
171: ExtraChars (0 s)
171: NestedViews (0 s)
171: ViewSpecOpen_NullSelf (0 s)
171: ViewSpecOpen_NullParam_Db (0 s)
171: ViewSpecOpen_NullParam_Schema (0 s)
171: ViewSpecOpen_NullParam_View (0 s)
171: ViewSpecOpen_WrongNumberOfParams (0 s)
171: ViewSpecOpen_ParamNotTable (0 s)
171: MakeCursor (0 s)
171: NestedView (0 s)
171: 
171: *** No errors detected (0 s total)
 93/187 Test #171: Test_Vdb_dump_view-spec ...........................   Passed    0.09 sec
test 174
        Start 174: Test_VdbValidate_Unit

174: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/Test_VdbValidate_Unit
174: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/vdb-validate
174: Test timeout computed to be: 1500
174: Running 3 test cases...
174: is_sorted_empty (0 s)
174: is_sorted_sorted (0 s)
174: is_sorted_unsorted (0 s)
174: 
174: *** No errors detected (0 s total)
 94/187 Test #174: Test_VdbValidate_Unit .............................   Passed    0.01 sec
test 178
        Start 178: Test_Sra_Info_Help

178: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info "-h" ">actual/Test_Sra_Info_Help.stdout"
178: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info
178: Test timeout computed to be: 1500
178: 
178: Usage:
178:   sra-info <accession> [options]
178: 
178: Options:
178:   -P|--platform                    print platform(s) 
178:   -Q|--quality                     are quality scores stored or generated 
178:   -A|--is-aligned                  is data aligned 
178:   -C|--schema                      print schema version and dependencies 
178:   -S|--spot-layout                 print spot layout(s). Uses CONSENSUS table 
178:                                    if present, SEQUENCE table otherwise 
178:   -f|--format <format>             output format: 
178:       csv ..... comma separated values on one line
178:       xml ..... xml-style
178:       json .... json-style
178:       tab ..... tab-separated values on one line
178:              csv and tab formats can be used just with a single query
178:              --schema does npt support csv and tab
178:   -l|--limit <N>                   limit output to <N> elements, e.g. <N> most 
178:                                    popular spot layouts; <N> must be positive 
178:   -D|--detail <N>                  detail level, <0> the least detailed 
178:                                    output; <N> must be or greater 
178:   -R|--rows <N>                    report spot layouts for the first <N> rows 
178:                                    of the table 
178:   -h|--help                        Output brief explanation for the program. 
178:   -V|--version                     Display the version of the program then 
178:                                    quit. 
178:   -L|--log-level <level>           Logging level as number or enum string. One 
178:                                    of (fatal|sys|int|err|warn|info|debug) or 
178:                                    (0-6) Current/default is warn. 
178:   -v|--verbose                     Increase the verbosity of the program 
178:                                    status messages. Use multiple times for more 
178:                                    verbosity. Negates quiet. 
178:   -q|--quiet                       Turn off all status messages for the 
178:                                    program. Negated by verbose. 
178:   --option-file <file>             Read more options and parameters from the 
178:                                    file. 
178: 
178: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info : 3.0.9
178: 
 95/187 Test #178: Test_Sra_Info_Help ................................   Passed    0.01 sec
test 179
        Start 179: Test_Sra_Info_NoParam

179: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info
179: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info
179: Test timeout computed to be: 1500
179: 
179: Usage:
179:   sra-info <accession> [options]
179: 
179: 
179: Use option --help for more information.
179: 
 96/187 Test #179: Test_Sra_Info_NoParam .............................   Passed    0.08 sec
test 180
        Start 180: Test_Sra_Info_MultipleParams

180: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info "SRR000123" "SRR0001234"
180: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info
180: Test timeout computed to be: 1500
180: 
180: Usage:
180:   sra-info <accession> [options]
180: 
180: 
180: Use option --help for more information.
180: 
 97/187 Test #180: Test_Sra_Info_MultipleParams ......................   Passed    0.05 sec
test 181
        Start 181: Test_Sra_Info_Limit_Negative

181: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info "--spot-layout" "DRR032985" "--limit" "-1"
181: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info
181: Test timeout computed to be: 1500
181: 
181: 
181: invalid value for --limit(not a positive number)
 98/187 Test #181: Test_Sra_Info_Limit_Negative ......................   Passed    0.07 sec
test 182
        Start 182: Test_Sra_Info_Limit_Zero

182: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info "--spot-layout" "DRR032985" "--limit" "0"
182: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info
182: Test timeout computed to be: 1500
182: 
182: 
182: invalid value for --limit(not a positive number)
 99/187 Test #182: Test_Sra_Info_Limit_Zero ..........................   Passed    0.08 sec
test 188
        Start 188: Test_Sra_Info_Platform_Format_CSV

188: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info -P ./input/MultiPlatform.sra -f csv" "." "4.1"
188: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info
188: Test timeout computed to be: 1500
188: running 4.1
188: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info -P ./input/MultiPlatform.sra -f csv 1>./actual/4.1/stdout 2>./actual/4.1/stderr
100/187 Test #188: Test_Sra_Info_Platform_Format_CSV .................   Passed    0.19 sec
test 189
        Start 189: Test_Sra_Info_Platform_Format_XML

189: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info -P ./input/MultiPlatform.sra -f xml" "." "4.2"
189: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info
189: Test timeout computed to be: 1500
189: running 4.2
189: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info -P ./input/MultiPlatform.sra -f xml 1>./actual/4.2/stdout 2>./actual/4.2/stderr
101/187 Test #189: Test_Sra_Info_Platform_Format_XML .................   Passed    0.20 sec
test 190
        Start 190: Test_Sra_Info_Platform_Format_Json

190: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info -P ./input/MultiPlatform.sra -f json" "." "4.3"
190: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info
190: Test timeout computed to be: 1500
190: running 4.3
190: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info -P ./input/MultiPlatform.sra -f json 1>./actual/4.3/stdout 2>./actual/4.3/stderr
102/187 Test #190: Test_Sra_Info_Platform_Format_Json ................   Passed    0.19 sec
test 191
        Start 191: Test_Sra_Info_Platform_Format_Tab

191: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info -P ./input/MultiPlatform.sra -f tab" "." "4.4"
191: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info
191: Test timeout computed to be: 1500
191: running 4.4
191: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info -P ./input/MultiPlatform.sra -f tab 1>./actual/4.4/stdout 2>./actual/4.4/stderr
103/187 Test #191: Test_Sra_Info_Platform_Format_Tab .................   Passed    0.15 sec
test 192
        Start 192: Test_Sra_Info_IsAligned_No

192: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info -A SRR000123" "." "5.1"
192: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info
192: Test timeout computed to be: 1500
192: running 5.1
192: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info -A SRR000123 1>./actual/5.1/stdout 2>./actual/5.1/stderr
104/187 Test #192: Test_Sra_Info_IsAligned_No ........................   Passed    1.09 sec
test 194
        Start 194: Test_Sra_Info_Quality_Physical

194: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info --quality ./input/MultiPlatform.sra" "." "6.1"
194: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info
194: Test timeout computed to be: 1500
194: running 6.1
194: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info --quality ./input/MultiPlatform.sra 1>./actual/6.1/stdout 2>./actual/6.1/stderr
105/187 Test #194: Test_Sra_Info_Quality_Physical ....................   Passed    0.18 sec
test 208
        Start 208: Test_Sra_Info_Schema_Default

208: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info --schema input/MultiPlatform.sra" "." "9.0"
208: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info
208: Test timeout computed to be: 1500
208: running 9.0
208: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info --schema input/MultiPlatform.sra 1>./actual/9.0/stdout 2>./actual/9.0/stderr
106/187 Test #208: Test_Sra_Info_Schema_Default ......................   Passed    0.17 sec
test 209
        Start 209: Test_Sra_Info_Schema_Json

209: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info --schema input/MultiPlatform.sra -fjson" "." "9.1"
209: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info
209: Test timeout computed to be: 1500
209: running 9.1
209: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info --schema input/MultiPlatform.sra -fjson 1>./actual/9.1/stdout 2>./actual/9.1/stderr
107/187 Test #209: Test_Sra_Info_Schema_Json .........................   Passed    0.17 sec
test 210
        Start 210: Test_Sra_Info_Schema_Xml

210: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info --schema input/MultiPlatform.sra -fxml" "." "9.2"
210: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info
210: Test timeout computed to be: 1500
210: running 9.2
210: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info --schema input/MultiPlatform.sra -fxml 1>./actual/9.2/stdout 2>./actual/9.2/stderr
108/187 Test #210: Test_Sra_Info_Schema_Xml ..........................   Passed    0.17 sec
test 211
        Start 211: Test_Sra_Info_ACPQS_Default

211: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info input/MultiPlatform.sra -ACPQS" "." "10.0"
211: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info
211: Test timeout computed to be: 1500
211: running 10.0
211: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info input/MultiPlatform.sra -ACPQS 1>./actual/10.0/stdout 2>./actual/10.0/stderr
109/187 Test #211: Test_Sra_Info_ACPQS_Default .......................   Passed    0.38 sec
test 212
        Start 212: Test_Sra_Info_ACPQS_Json

212: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info input/MultiPlatform.sra -ACPQS -fjson" "." "10.1"
212: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info
212: Test timeout computed to be: 1500
212: running 10.1
212: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info input/MultiPlatform.sra -ACPQS -fjson 1>./actual/10.1/stdout 2>./actual/10.1/stderr
110/187 Test #212: Test_Sra_Info_ACPQS_Json ..........................   Passed    0.32 sec
test 213
        Start 213: Test_Sra_Info_ACPQS_Xml

213: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info input/MultiPlatform.sra -ACPQS -fxml" "." "10.2"
213: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/external/sra-info
213: Test timeout computed to be: 1500
213: running 10.2
213: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/sra-info input/MultiPlatform.sra -ACPQS -fxml 1>./actual/10.2/stdout 2>./actual/10.2/stderr
111/187 Test #213: Test_Sra_Info_ACPQS_Xml ...........................   Passed    0.38 sec
test 214
        Start 214: BamTestSetup

214: Test command: /usr/bin/bash "-c" "echo 'vdb/schema/paths = "/usr/include/ncbi-vdb"
/LIBS/GUID="8test002-6ab7-41b2-bfd0-bamfload"' > tmp.kfg"
214: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/bam-load
214: Test timeout computed to be: 1500
112/187 Test #214: BamTestSetup ......................................   Passed    0.00 sec
test 215
        Start 215: Test_BamLoader_1

215: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/bam-load" "bash" "-c" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/bam-load -o out.sra test.sam"
215: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/bam-load
215: Test timeout computed to be: 1500
113/187 Test #215: Test_BamLoader_1 ..................................   Passed    0.33 sec
test 216
        Start 216: Test_BamLoader_MinBatchSize

216: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/bam-load" "bash" "-c" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/bam-load -o out.sra --min-batch-size 999999 test.sam"
216: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/bam-load
216: Test timeout computed to be: 1500
114/187 Test #216: Test_BamLoader_MinBatchSize .......................   Passed    0.35 sec
test 217
        Start 217: Test_BamLoader_MinBatchSize_Bad

217: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/bam-load" "bash" "-c" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/bam-load -o out.sra --min-batch-size notanumber test.sam"
217: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/bam-load
217: Test timeout computed to be: 1500
217: min-batch-size: bad value
217: Usage:
217: 	bam-load [options] <bam-file>
217: 
217: Summary:
217: 	Load a BAM formatted data file
217: 
217: Example:
217: 	bam-load -o /tmp/SRZ123456 -k analysis.bam.cfg 123456.bam
217: 
217: 
217: Use option --help for more information.
217: 
217: 2026-02-13T16:51:58 bam-load.3.0.9 err: param incorrect while accessing argument list within application support module - load failed
115/187 Test #217: Test_BamLoader_MinBatchSize_Bad ...................   Passed    0.06 sec
test 218
        Start 218: Test_BamLoader_platform

218: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/Test_BamLoader_platform
218: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/bam-load
218: Test timeout computed to be: 1500
116/187 Test #218: Test_BamLoader_platform ...........................   Passed    0.00 sec
test 219
        Start 219: LatfTestSetup

219: Test command: /usr/bin/bash "-c" "echo 'vdb/schema/paths = "/usr/include/ncbi-vdb"
/LIBS/GUID="8test002-6ab7-41b2-bfd0-latfload"' > tmp.kfg"
219: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
219: Test timeout computed to be: 1500
117/187 Test #219: LatfTestSetup .....................................   Passed    0.00 sec
test 220
        Start 220: SlowTest_FastqLoader_id2name

220: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/SlowTest_FastqLoader_id2name
220: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
220: Test timeout computed to be: 1500
220: Running 12 test cases...
220: Init_NullSelf (0 s)
220: Whack_NullSelf (0 s)
220: Init_Whack (0 s)
220: Add_NullSelf (0 s)
220: Add_NullName (0 s)
220: Get_NullSelf (0 s)
220: Get_NullRes (0 s)
220: Get_Empty (0 s)
220: Get_Found (0 s)
220: Get_NotFound (0 s)
220: AddMultiple_Get (0 s)
220: AddRealloc (0 s)
220: 
220: *** No errors detected (0 s total)
118/187 Test #220: SlowTest_FastqLoader_id2name ......................   Passed    0.01 sec
test 221
        Start 221: Test_FastqLoader_WbFastq_dflt

221: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/Test_FastqLoader_WbFastq_dflt
221: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
221: Test timeout computed to be: 1500
221: Running 103 test cases...
221: EmptyFile (0 s)
221: EndLines (0 s)
221: SyntaxError1 (0 s)
221: SyntaxError2 (0 s)
221: RecoveryFromErrorAtTopLevel (0 s)
221: RecoveryFromErrorInHeader (0 s)
221: RecoveryFromErrorInRead (0 s)
221: RecoveryFromErrorInQuality (0 s)
221: ErrorLineNumber (0 s)
221: Tag1 (0 s)
221: Tag2_1 (0 s)
221: Tag2_2 (0 s)
221: Tag3 (0 s)
221: Tag4 (0 s)
221: Tag5 (0 s)
221: Tag6 (0 s)
221: Tag7 (0 s)
221: Tag8 (0 s)
221: Tag9 (0 s)
221: Tag10 (0 s)
221: Tag11 (0 s)
221: Tag12 (0 s)
221: Tag13 (0 s)
221: Tag14 (0 s)
221: Tag15 (0 s)
221: NotRejected (0 s)
221: SequenceNoAlignment (0 s)
221: TestSequenceGetReadLength (0 s)
221: TestSequenceGetReadLength_MultiLine (0 s)
221: TestSequenceGetRead (0 s)
221: TestSequenceGetRead_MultiLine (0 s)
221: TestSequenceGetRead2 (0 s)
221: TestSequenceGetRead2_StopOutOfRange (0 s)
221: TestSequenceGetRead2_StartOutOfRange (0 s)
221: TestSequenceGetRead2_MultiLine_InsideFirstLine (0 s)
221: TestSequenceGetRead2_MultiLine_InsideSecondLine (0 s)
221: TestSequenceGetRead2_MultiLine_AcrossEOL (0 s)
221: TestSequenceGetRead2_MultiLine_StopOutOfRange (0 s)
221: TestSequenceGetRead2_MultiLine_StartOutOfRange (0 s)
221: SequenceGetQuality33 (0 s)
221: SequenceGetQuality64 (0 s)
221: SequenceGetQualityLogOdds (0 s)
221: SequenceBaseSpace (0 s)
221: SequenceColorSpace (0 s)
221: SequenceGetOrientationIsReverse (0 s)
221: ReadNumber (0 s)
221: ReadNumberMissing (0 s)
221: ReadNumberDefault (0 s)
221: ReadNumberOverride (0 s)
221: RunSpotRead (0 s)
221: RunSpotRead_withTail (0 s)
221: RunSpotNothing (0 s)
221: SequenceGetSpotNameIllumina (0 s)
221: SequenceGetSpotGroupIllumina (0 s)
221: SequenceGetSpotGroupIllumina_Ignored (0 s)
221: SequenceGetSpotGroup_Empty (0 s)
221: SequenceGetSpotGroup_Zero (0 s)
221: SequenceGetSpotGroupBarcode (0 s)
221: SequenceGetSpotGroupBarcode_WithPluses (0 s)
221: SequenceGetSpotGroupUnderscore (0 s)
221: HashStyleBarcodeAndReadNumbersAndJunk (0 s)
221: SequenceWasPaired1 (0 s)
221: SequenceWasPaired2 (0 s)
221: SequenceWasPaired3 (0 s)
221: SequenceWasPaired4 (0 s)
221: SequenceWasPaired5 (0 s)
221: SequenceGetSpotNameOneLine (0 s)
221: SequenceGetNameNumeric (0 s)
221: GtStartsQualityOnly (0 s)
221: OneLineRead (0 s)
221: ForcePhredOffset (0 s)
221: IlluminaCasava_1_8 (0 s)
221: IlluminaCasava_1_8_SpotGroupNumber (0 s)
221: IlluminaCasava_1_8_SpotGroup_MoreMadness (0 s)
221: IlluminaCasava_1_8_EmptyTag (0 s)
221: Illumina_NegativeCoords (0 s)
221: Illumina_Underscore (0 s)
221: Illumina_IdentifierAtFront (0 s)
221: Illumina_SpaceAndIdentifierAtFront (0 s)
221: SRR1778155 (0 s)
221: SRA192487 (0 s)
221: NoEolAtEof (0 s)
221: GtStartsReadOnly (0 s)
221: Quality33TooLow (0 s)
221: Quality64TooLow (0 s)
221: QualityLogoddsTooLow (0 s)
221: DecimalQualityRejected (0 s)
221: PacbioRaw (0 s)
221: PacbioCcs (0 s)
221: PacbioNoReadNumbers (0 s)
221: PacbioWsCcs (0 s)
221: PacbioError (0 s)
221: NotPairedRead_Error (0 s)
221: NoFragmentInfo_Error (0 s)
221: NoColonAtTheEnd_Error (0 s)
221: MissingRead (0 s)
221: UnexpectedEOLreported (0 s)
221: AnotherUnexpectedEOLreported (0 s)
221: FastqDumpOutput (0 s)
221: Barcodes_Plus (0 s)
221: Barcodes_Underscore (0 s)
221: FastqMultiLineSequenceFasta (0 s)
221: FastqMultiLineSequenceFastq (0 s)
221: 
221: *** No errors detected (0 s total)
119/187 Test #221: Test_FastqLoader_WbFastq_dflt .....................   Passed    0.05 sec
test 222
        Start 222: Test_FastqLoader_WbFastqParse

222: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/Test_FastqLoader_WbFastqParse
222: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
222: Test timeout computed to be: 1500
222: Running 17 test cases...
222: EmptyInput (0 s)
222: TagLine1 (0 s)
222: SequenceQuality (0 s)
222: QualityOnly (0 s)
222: NoEOL_InQuality (0 s)
222: CRnoLF (0 s)
222: CommaSeparatedQuality3 (0 s)
222: WsBeforeEol (0 s)
222: SkipToEol (0 s)
222: InlineBaseSequence (0 s)
222: BufferBreakInTag (0 s)
222: BufferBreakInMultilineRead (0 s)
222: BufferBreakInMultilineQuality (0 s)
222: ReadNumberNotSeparated (0 s)
222: ReadNumberNotSeparated_Variation (0 s)
222: BarcodesReadNumbersJunkOhMy (0 s)
222: Aviti (0 s)
222: 
222: *** No errors detected (0 s total)
120/187 Test #222: Test_FastqLoader_WbFastqParse .....................   Passed    0.01 sec
test 223
        Start 223: Test_FastqLoader_WbFastqLoader

223: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/Test_FastqLoader_WbFastqLoader
223: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
223: Environment variables: 
223:  NCBI_SETTINGS=/
223:  VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
223: Test timeout computed to be: 1500
223: Running 14 test cases...
223: CommonWriterOneFile (0 s)
223: 2026-02-13T16:51:59 Test_FastqLoader_WbFastqLoader.1.0.0 err: data inconsistent while reading file within application support module - Duplicate read name 'HWUSI-EAS499:1:3:9:1822'
223: CommonWriterDuplicateReadnames_Error (0 s)
223: 2026-02-13T16:51:59 Test_FastqLoader_WbFastqLoader.1.0.0 warn: Spot 'HWUSI-EAS499:1:3:9:1822' has already been assigned a spot id
223: CommonWriterDuplicateReadnames_Allowed (0 s)
223: 2026-02-13T16:51:59 Test_FastqLoader_WbFastqLoader.1.0.0 err: data inconsistent while reading file within application support module - Duplicate read name 'HWUSI-EAS499:1:3:9:1822'
223: CommonWriterDuplicateReadnames_SameFragment (0 s)
223: CommonWriterDuplicateReadnames_DiffFragment (0 s)
223: 2026-02-13T16:51:59 Test_FastqLoader_WbFastqLoader.1.0.0 warn: data inconsistent while reading file within application support module - Spot 'HWUSI-EAS499:1:3:9:1822', which was first seen with mate info, now has no mate info
223: 2026-02-13T16:51:59 Test_FastqLoader_WbFastqLoader.1.0.0 err: data invalid while closing table - Too many bad records: records: 2, bad records: 1, bad records percentage: 0.50, allowed percentage: 0.00
223: CommonWriterDuplicateReadnames_MatedThenUnmated (0 s)
223: 2026-02-13T16:51:59 Test_FastqLoader_WbFastqLoader.1.0.0 warn: data inconsistent while reading file within application support module - Spot 'HWUSI-EAS499:1:3:9:1822', which was first seen without mate info, now has mate info
223: 2026-02-13T16:51:59 Test_FastqLoader_WbFastqLoader.1.0.0 err: data invalid while closing table - Too many bad records: records: 2, bad records: 1, bad records percentage: 0.50, allowed percentage: 0.00
223: CommonWriterDuplicateReadnames_UnmatedThenMated (0 s)
223: NoSpotAssemply (0 s)
223: NoSpotAssemply_case2 (0 s)
223: Interleaved_OneRead (0 s)
223: Interleaved_MultipleReads (0 s)
223: Interleaved_NoMatch (0 s)
223: Interleaved_1_longer (0 s)
223: Interleaved_2_longer (0 s)
223: 
223: *** No errors detected (1 s total)
121/187 Test #223: Test_FastqLoader_WbFastqLoader ....................   Passed    1.53 sec
test 224
        Start 224: Test_FastqLoader_1.1

224: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/1.1.fastq --quality PHRED_33" "." "1.1" "0"
224: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
224: Test timeout computed to be: 1500
224: running 1.1
224: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/1.1.fastq --quality PHRED_33 -o ./actual/1.1/obj 1>./actual/1.1/load.stdout 2>./actual/1.1/load.stderr
122/187 Test #224: Test_FastqLoader_1.1 ..............................   Passed    0.45 sec
test 225
        Start 225: Test_FastqLoader_1.2

225: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/1.2.fastq --quality PHRED_64" "." "1.2" "0"
225: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
225: Test timeout computed to be: 1500
225: running 1.2
225: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/1.2.fastq --quality PHRED_64 -o ./actual/1.2/obj 1>./actual/1.2/load.stdout 2>./actual/1.2/load.stderr
123/187 Test #225: Test_FastqLoader_1.2 ..............................   Passed    0.47 sec
test 226
        Start 226: Test_FastqLoader_1.3

226: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/1.3.fastq --quality PHRED_33" "." "1.3" "3"
226: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
226: Test timeout computed to be: 1500
226: running 1.3
226: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/1.3.fastq --quality PHRED_33 -o ./actual/1.3/obj 1>./actual/1.3/load.stdout 2>./actual/1.3/load.stderr
124/187 Test #226: Test_FastqLoader_1.3 ..............................   Passed    0.19 sec
test 227
        Start 227: Test_FastqLoader_1.4

227: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/1.4.fastq --quality LOGODDS" "." "1.4" "0"
227: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
227: Test timeout computed to be: 1500
227: running 1.4
227: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/1.4.fastq --quality LOGODDS -o ./actual/1.4/obj 1>./actual/1.4/load.stdout 2>./actual/1.4/load.stderr
125/187 Test #227: Test_FastqLoader_1.4 ..............................   Passed    0.48 sec
test 228
        Start 228: Test_FastqLoader_2.1

228: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/2.1.fastq --quality PHRED_33" "." "2.1" "0"
228: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
228: Test timeout computed to be: 1500
228: running 2.1
228: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/2.1.fastq --quality PHRED_33 -o ./actual/2.1/obj 1>./actual/2.1/load.stdout 2>./actual/2.1/load.stderr
126/187 Test #228: Test_FastqLoader_2.1 ..............................   Passed    0.47 sec
test 229
        Start 229: Test_FastqLoader_2.5

229: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/2.5.fastq --quality PHRED_33" "." "2.5" "0"
229: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
229: Test timeout computed to be: 1500
229: running 2.5
229: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/2.5.fastq --quality PHRED_33 -o ./actual/2.5/obj 1>./actual/2.5/load.stdout 2>./actual/2.5/load.stderr
127/187 Test #229: Test_FastqLoader_2.5 ..............................   Passed    0.47 sec
test 230
        Start 230: Test_FastqLoader_2.6

230: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/2.6.fastq --quality PHRED_33" "." "2.6" "0"
230: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
230: Test timeout computed to be: 1500
230: running 2.6
230: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/2.6.fastq --quality PHRED_33 -o ./actual/2.6/obj 1>./actual/2.6/load.stdout 2>./actual/2.6/load.stderr
128/187 Test #230: Test_FastqLoader_2.6 ..............................   Passed    0.44 sec
test 231
        Start 231: Test_FastqLoader_2.7

231: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/2.7.fastq --quality PHRED_33" "." "2.7" "3"
231: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
231: Test timeout computed to be: 1500
231: running 2.7
231: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/2.7.fastq --quality PHRED_33 -o ./actual/2.7/obj 1>./actual/2.7/load.stdout 2>./actual/2.7/load.stderr
129/187 Test #231: Test_FastqLoader_2.7 ..............................   Passed    0.27 sec
test 232
        Start 232: Test_FastqLoader_2.7.1

232: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/2.7.fastq --quality PHRED_33 --allow_duplicates" "." "2.7.1" "0"
232: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
232: Test timeout computed to be: 1500
232: running 2.7.1
232: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/2.7.fastq --quality PHRED_33 --allow_duplicates -o ./actual/2.7.1/obj 1>./actual/2.7.1/load.stdout 2>./actual/2.7.1/load.stderr
130/187 Test #232: Test_FastqLoader_2.7.1 ............................   Passed    0.47 sec
test 233
        Start 233: Test_FastqLoader_2.8.1

233: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/2.8.1.fastq --quality PHRED_33" "." "2.8.1" "0"
233: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
233: Test timeout computed to be: 1500
233: running 2.8.1
233: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/2.8.1.fastq --quality PHRED_33 -o ./actual/2.8.1/obj 1>./actual/2.8.1/load.stdout 2>./actual/2.8.1/load.stderr
131/187 Test #233: Test_FastqLoader_2.8.1 ............................   Passed    0.46 sec
test 234
        Start 234: Test_FastqLoader_2.9

234: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/2.9.fastq --quality PHRED_33" "." "2.9" "3"
234: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
234: Test timeout computed to be: 1500
234: running 2.9
234: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/2.9.fastq --quality PHRED_33 -o ./actual/2.9/obj 1>./actual/2.9/load.stdout 2>./actual/2.9/load.stderr
132/187 Test #234: Test_FastqLoader_2.9 ..............................   Passed    0.24 sec
test 235
        Start 235: Test_FastqLoader_2.9.1

235: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/2.9.1.fastq --quality PHRED_33" "." "2.9.1" "3"
235: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
235: Test timeout computed to be: 1500
235: running 2.9.1
235: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/2.9.1.fastq --quality PHRED_33 -o ./actual/2.9.1/obj 1>./actual/2.9.1/load.stdout 2>./actual/2.9.1/load.stderr
133/187 Test #235: Test_FastqLoader_2.9.1 ............................   Passed    0.24 sec
test 236
        Start 236: Test_FastqLoader_3.1

236: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/3.1a.fastq input/3.1b.fastq --quality PHRED_33" "." "3.1" "0"
236: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
236: Test timeout computed to be: 1500
236: running 3.1
236: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/3.1a.fastq input/3.1b.fastq --quality PHRED_33 -o ./actual/3.1/obj 1>./actual/3.1/load.stdout 2>./actual/3.1/load.stderr
134/187 Test #236: Test_FastqLoader_3.1 ..............................   Passed    0.48 sec
test 237
        Start 237: Test_FastqLoader_4.1

237: Test command: /usr/bin/cmake "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "bash" "-c" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load ./input/4.fastq --tmpfs ./actual -v -o actual/4.1.obj --quality PHRED_33 2>&1 | grep "Path for scratch files: ./actual/key2id""
237: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
237: Test timeout computed to be: 1500
237: 2026-02-13T16:52:05 latf-load.3.0.9: Path for scratch files: ./actual/key2id.1042707.1 
135/187 Test #237: Test_FastqLoader_4.1 ..............................   Passed    0.23 sec
test 238
        Start 238: Test_FastqLoader_4.2

238: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/4.fastq --qual-quant 1:10,10:20,20:30,30:- --quality PHRED_33" "." "4.2" "0"
238: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
238: Test timeout computed to be: 1500
238: running 4.2
238: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/4.fastq --qual-quant 1:10,10:20,20:30,30:- --quality PHRED_33 -o ./actual/4.2/obj 1>./actual/4.2/load.stdout 2>./actual/4.2/load.stderr
136/187 Test #238: Test_FastqLoader_4.2 ..............................   Passed    0.45 sec
test 239
        Start 239: Test_FastqLoader_4.3.1

239: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/4.fastq --cache-size BIG --quality PHRED_33" "." "4.3.1" "3"
239: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
239: Test timeout computed to be: 1500
239: running 4.3.1
239: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/4.fastq --cache-size BIG --quality PHRED_33 -o ./actual/4.3.1/obj 1>./actual/4.3.1/load.stdout 2>./actual/4.3.1/load.stderr
137/187 Test #239: Test_FastqLoader_4.3.1 ............................   Passed    0.09 sec
test 240
        Start 240: Test_FastqLoader_4.5

240: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/4.5.fastq --max-err-count 2 --quality PHRED_33" "." "4.5" "3"
240: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
240: Test timeout computed to be: 1500
240: running 4.5
240: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/4.5.fastq --max-err-count 2 --quality PHRED_33 -o ./actual/4.5/obj 1>./actual/4.5/load.stdout 2>./actual/4.5/load.stderr
138/187 Test #240: Test_FastqLoader_4.5 ..............................   Passed    0.24 sec
test 241
        Start 241: Test_FastqLoader_4.5.2

241: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/4.5.2.fastq --platform ILLUMINA --quality PHRED_33 --max-err-count 2" "." "4.5.2" "3"
241: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
241: Test timeout computed to be: 1500
241: running 4.5.2
241: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/4.5.2.fastq --platform ILLUMINA --quality PHRED_33 --max-err-count 2 -o ./actual/4.5.2/obj 1>./actual/4.5.2/load.stdout 2>./actual/4.5.2/load.stderr
139/187 Test #241: Test_FastqLoader_4.5.2 ............................   Passed    0.27 sec
test 242
        Start 242: Test_FastqLoader_4.6

242: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/4.fastq -p LS454 --quality PHRED_33" "." "4.6" "0"
242: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
242: Test timeout computed to be: 1500
242: running 4.6
242: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/4.fastq -p LS454 --quality PHRED_33 -o ./actual/4.6/obj 1>./actual/4.6/load.stdout 2>./actual/4.6/load.stderr
140/187 Test #242: Test_FastqLoader_4.6 ..............................   Passed    0.45 sec
test 243
        Start 243: Test_FastqLoader_4.6.1

243: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/4.fastq -p SOMETHINGELSE --quality PHRED_33" "." "4.6.1" "3"
243: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
243: Test timeout computed to be: 1500
243: running 4.6.1
243: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/4.fastq -p SOMETHINGELSE --quality PHRED_33 -o ./actual/4.6.1/obj 1>./actual/4.6.1/load.stdout 2>./actual/4.6.1/load.stderr
141/187 Test #243: Test_FastqLoader_4.6.1 ............................   Passed    0.08 sec
test 244
        Start 244: Test_FastqLoader_4.7

244: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/not_there --quality PHRED_33" "." "4.7" "3"
244: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
244: Test timeout computed to be: 1500
244: running 4.7
244: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/not_there --quality PHRED_33 -o ./actual/4.7/obj 1>./actual/4.7/load.stdout 2>./actual/4.7/load.stderr
142/187 Test #244: Test_FastqLoader_4.7 ..............................   Passed    0.24 sec
test 245
        Start 245: Test_FastqLoader_4.8

245: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/4.8.fastq --quality PHRED_33 --no-readnames" "." "4.8" "0"
245: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
245: Test timeout computed to be: 1500
245: running 4.8
245: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/4.8.fastq --quality PHRED_33 --no-readnames -o ./actual/4.8/obj 1>./actual/4.8/load.stdout 2>./actual/4.8/load.stderr
143/187 Test #245: Test_FastqLoader_4.8 ..............................   Passed    0.45 sec
test 246
        Start 246: Test_FastqLoader_5.0

246: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/5.0.fastq.gz --quality PHRED_33" "." "5.0" "0"
246: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
246: Test timeout computed to be: 1500
246: running 5.0
246: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/5.0.fastq.gz --quality PHRED_33 -o ./actual/5.0/obj 1>./actual/5.0/load.stdout 2>./actual/5.0/load.stderr
144/187 Test #246: Test_FastqLoader_5.0 ..............................   Passed    0.45 sec
test 247
        Start 247: Test_FastqLoader_6.0

247: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/6.0.fastq --quality PHRED_33" "." "6.0" "0"
247: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
247: Test timeout computed to be: 1500
247: running 6.0
247: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/6.0.fastq --quality PHRED_33 -o ./actual/6.0/obj 1>./actual/6.0/load.stdout 2>./actual/6.0/load.stderr
145/187 Test #247: Test_FastqLoader_6.0 ..............................   Passed    0.47 sec
test 248
        Start 248: Test_FastqLoader_7.1

248: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/7.1.fastq --platform=PACBIO --quality PHRED_33" "." "7.1" "0"
248: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
248: Test timeout computed to be: 1500
248: running 7.1
248: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/7.1.fastq --platform=PACBIO --quality PHRED_33 -o ./actual/7.1/obj 1>./actual/7.1/load.stdout 2>./actual/7.1/load.stderr
146/187 Test #248: Test_FastqLoader_7.1 ..............................   Passed    0.46 sec
test 249
        Start 249: Test_FastqLoader_7.2

249: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/7.2.fastq --platform=PACBIO --quality PHRED_33" "." "7.2" "0"
249: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
249: Test timeout computed to be: 1500
249: running 7.2
249: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/7.2.fastq --platform=PACBIO --quality PHRED_33 -o ./actual/7.2/obj 1>./actual/7.2/load.stdout 2>./actual/7.2/load.stderr
147/187 Test #249: Test_FastqLoader_7.2 ..............................   Passed    0.46 sec
test 250
        Start 250: Test_FastqLoader_7.3

250: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/7.3.fastq --platform=PACBIO --quality PHRED_33" "." "7.3" "0"
250: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
250: Test timeout computed to be: 1500
250: running 7.3
250: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/7.3.fastq --platform=PACBIO --quality PHRED_33 -o ./actual/7.3/obj 1>./actual/7.3/load.stdout 2>./actual/7.3/load.stderr
148/187 Test #250: Test_FastqLoader_7.3 ..............................   Passed    0.46 sec
test 251
        Start 251: Test_FastqLoader_8.0

251: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/8.0.fastq --quality PHRED_33" "." "8.0" "0"
251: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
251: Test timeout computed to be: 1500
251: running 8.0
251: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/8.0.fastq --quality PHRED_33 -o ./actual/8.0/obj 1>./actual/8.0/load.stdout 2>./actual/8.0/load.stderr
149/187 Test #251: Test_FastqLoader_8.0 ..............................   Passed    0.46 sec
test 252
        Start 252: Test_FastqLoader_8.1

252: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/8.1.fastq --quality PHRED_33" "." "8.1" "3"
252: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
252: Test timeout computed to be: 1500
252: running 8.1
252: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/8.1.fastq --quality PHRED_33 -o ./actual/8.1/obj 1>./actual/8.1/load.stdout 2>./actual/8.1/load.stderr
150/187 Test #252: Test_FastqLoader_8.1 ..............................   Passed    0.26 sec
test 253
        Start 253: Test_FastqLoader_9.0

253: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/9.0.fastq --quality PHRED_33" "." "9.0" "0"
253: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
253: Test timeout computed to be: 1500
253: running 9.0
253: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/9.0.fastq --quality PHRED_33 -o ./actual/9.0/obj 1>./actual/9.0/load.stdout 2>./actual/9.0/load.stderr
151/187 Test #253: Test_FastqLoader_9.0 ..............................   Passed    0.46 sec
test 254
        Start 254: Test_FastqLoader_10.0

254: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/10.0.fastq --quality PHRED_33" "." "10.0" "0"
254: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
254: Test timeout computed to be: 1500
254: running 10.0
254: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/10.0.fastq --quality PHRED_33 -o ./actual/10.0/obj 1>./actual/10.0/load.stdout 2>./actual/10.0/load.stderr
152/187 Test #254: Test_FastqLoader_10.0 .............................   Passed    0.46 sec
test 255
        Start 255: Test_FastqLoader_11.0

255: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/11.0.1.fasta input/11.0.2.fasta --quality PHRED_33" "." "11.0" "0"
255: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
255: Test timeout computed to be: 1500
255: running 11.0
255: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/11.0.1.fasta input/11.0.2.fasta --quality PHRED_33 -o ./actual/11.0/obj 1>./actual/11.0/load.stdout 2>./actual/11.0/load.stderr
153/187 Test #255: Test_FastqLoader_11.0 .............................   Passed    0.47 sec
test 256
        Start 256: Test_FastqLoader_11.1

256: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/11.1.1.fastq input/11.1.2.fastq --quality PHRED_33" "." "11.1" "0"
256: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
256: Test timeout computed to be: 1500
256: running 11.1
256: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/11.1.1.fastq input/11.1.2.fastq --quality PHRED_33 -o ./actual/11.1/obj 1>./actual/11.1/load.stdout 2>./actual/11.1/load.stderr
154/187 Test #256: Test_FastqLoader_11.1 .............................   Passed    0.46 sec
test 257
        Start 257: Test_FastqLoader_12.0

257: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/12.0.fastq --quality PHRED_33 --ignore-illumina-tags" "." "12.0" "0"
257: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
257: Test timeout computed to be: 1500
257: running 12.0
257: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/12.0.fastq --quality PHRED_33 --ignore-illumina-tags -o ./actual/12.0/obj 1>./actual/12.0/load.stdout 2>./actual/12.0/load.stderr
155/187 Test #257: Test_FastqLoader_12.0 .............................   Passed    0.49 sec
test 258
        Start 258: Test_FastqLoader_12.1

258: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/12.1.fastq --quality PHRED_33" "." "12.1" "0"
258: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
258: Test timeout computed to be: 1500
258: running 12.1
258: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/12.1.fastq --quality PHRED_33 -o ./actual/12.1/obj 1>./actual/12.1/load.stdout 2>./actual/12.1/load.stderr
156/187 Test #258: Test_FastqLoader_12.1 .............................   Passed    0.46 sec
test 259
        Start 259: Test_FastqLoader_12.2

259: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/12.2.fastq --quality PHRED_33" "." "12.2" "0"
259: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
259: Test timeout computed to be: 1500
259: running 12.2
259: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/12.2.fastq --quality PHRED_33 -o ./actual/12.2/obj 1>./actual/12.2/load.stdout 2>./actual/12.2/load.stderr
157/187 Test #259: Test_FastqLoader_12.2 .............................   Passed    0.46 sec
test 260
        Start 260: Test_FastqLoader_13.0

260: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/13.0.fastq --quality PHRED_33" "." "13.0" "0"
260: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
260: Test timeout computed to be: 1500
260: running 13.0
260: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/13.0.fastq --quality PHRED_33 -o ./actual/13.0/obj 1>./actual/13.0/load.stdout 2>./actual/13.0/load.stderr
158/187 Test #260: Test_FastqLoader_13.0 .............................   Passed    0.51 sec
test 261
        Start 261: Test_FastqLoader_13.1

261: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/13.1.fastq --quality PHRED_33" "." "13.1" "0"
261: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
261: Test timeout computed to be: 1500
261: running 13.1
261: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/13.1.fastq --quality PHRED_33 -o ./actual/13.1/obj 1>./actual/13.1/load.stdout 2>./actual/13.1/load.stderr
159/187 Test #261: Test_FastqLoader_13.1 .............................   Passed    0.46 sec
test 262
        Start 262: Test_FastqLoader_14.0

262: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/14.0.fasta --quality PHRED_33" "." "14.0" "0"
262: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
262: Test timeout computed to be: 1500
262: running 14.0
262: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/14.0.fasta --quality PHRED_33 -o ./actual/14.0/obj 1>./actual/14.0/load.stdout 2>./actual/14.0/load.stderr
160/187 Test #262: Test_FastqLoader_14.0 .............................   Passed    0.45 sec
test 263
        Start 263: Test_FastqLoader_15.0

263: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump -x READ_SEG" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load ./input/15.0.fastq --quality PHRED_33" "." "15.0" "0"
263: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
263: Test timeout computed to be: 1500
263: running 15.0
263: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load ./input/15.0.fastq --quality PHRED_33 -o ./actual/15.0/obj 1>./actual/15.0/load.stdout 2>./actual/15.0/load.stderr
161/187 Test #263: Test_FastqLoader_15.0 .............................   Passed    0.64 sec
test 264
        Start 264: Test_FastqLoader_16.0

264: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/16.0.fasta --quality PHRED_33 --platform=PACBIO" "." "16.0" "0"
264: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
264: Test timeout computed to be: 1500
264: running 16.0
264: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/16.0.fasta --quality PHRED_33 --platform=PACBIO -o ./actual/16.0/obj 1>./actual/16.0/load.stdout 2>./actual/16.0/load.stderr
162/187 Test #264: Test_FastqLoader_16.0 .............................   Passed    0.49 sec
test 265
        Start 265: Test_FastqLoader_16.1

265: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/16.1.fastq --quality PHRED_33 --platform=PACBIO" "." "16.1" "0"
265: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
265: Test timeout computed to be: 1500
265: running 16.1
265: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/16.1.fastq --quality PHRED_33 --platform=PACBIO -o ./actual/16.1/obj 1>./actual/16.1/load.stdout 2>./actual/16.1/load.stderr
163/187 Test #265: Test_FastqLoader_16.1 .............................   Passed    0.48 sec
test 266
        Start 266: Test_FastqLoader_17.0

266: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/17.0.fastq --quality PHRED_33" "." "17.0" "3"
266: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
266: Test timeout computed to be: 1500
266: running 17.0
266: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/17.0.fastq --quality PHRED_33 -o ./actual/17.0/obj 1>./actual/17.0/load.stdout 2>./actual/17.0/load.stderr
164/187 Test #266: Test_FastqLoader_17.0 .............................   Passed    0.25 sec
test 267
        Start 267: Test_FastqLoader_18.0

267: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader" "./runtestcase.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/18.0.fastq --quality PHRED_33" "." "18.0" "3"
267: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader
267: Test timeout computed to be: 1500
267: running 18.0
267: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/fastq-loader/input/18.0.fastq --quality PHRED_33 -o ./actual/18.0/obj 1>./actual/18.0/load.stdout 2>./actual/18.0/load.stderr
165/187 Test #267: Test_FastqLoader_18.0 .............................   Passed    0.24 sec
test 269
        Start 269: Test_KAPP_qfile

269: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/Test_KAPP_qfile
269: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/loader
269: Test timeout computed to be: 1500
269: start-position : 0
269: queue-size     : 1024
269: block-size     : 0
269: chunk-size     : 1024
166/187 Test #269: Test_KAPP_qfile ...................................   Passed    0.01 sec
test 270
        Start 270: Test_LOADERFILE

270: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/Test_LOADERFILE
270: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/loader
270: Test timeout computed to be: 1500
270: Running 5 test cases...
270: KQueueFile_ReadTimeout_FGsleeps (2 s)
270: KQueueFile_ReadTimeout_BGsleeps (3 s)
270: KQueueFile_WriteTimeout (2 s)
270: KLoaderFile_eolBeforeEof (0 s)
270: KLoaderFile_noEolBeforeEof (0 s)
270: 
270: *** No errors detected (7 s total)
167/187 Test #270: Test_LOADERFILE ...................................   Passed    7.09 sec
test 271
        Start 271: Test_LOADER

271: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/Test_LOADER
271: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/loader
271: Test timeout computed to be: 1500
271: Running 2 test cases...
271: LoaderMeta_Write (0 s)
271: LoaderMeta_WriteWithVersion (0 s)
271: 
271: *** No errors detected (0 s total)
168/187 Test #271: Test_LOADER .......................................   Passed    0.08 sec
test 272
        Start 272: Test_sra_sort_meta_copy

272: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/sra-sort/sra_sort_meta_copy.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "/usr/include/ncbi-vdb" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin"
272: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/loaders/sra-sort
272: Test timeout computed to be: 1500
272: Files before.xml and after.xml are identical
169/187 Test #272: Test_sra_sort_meta_copy ...........................   Passed    5.00 sec
test 273
        Start 273: Test_Align_samextract

273: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Align_samextract
273: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/align
273: Test timeout computed to be: 1500
273: Running 14 test cases...
273: Test_Qual_Decode (0 s)
273: Fast_Sequence (0 s)
273: Fast_u32toa (0 s)
273: Fast_i32toa (0 s)
273: Fast_strtoi64 (0 s)
273: Decode_Cigar (0 s)
273: Check_Cigar (0 s)
273: In_Range (0 s)
273: Is_MD5 (0 s)
273: Is_floworder (0 s)
273: header1 (0 s)
273: BAMfile (0 s)
273: Filter (0 s)
273: None of below files should hang:
273: 	fuzz/id000000,sig11,src000036,ophavoc,rep128
273: 	fuzz/id000000,src000000+000001,opsplice,rep16
273: 	fuzz/id000000,src000000,oparith8,pos3,val+10
273: 	fuzz/id000001,src000001,oparith16,pos10,val-6
273: 	fuzz/id000001,src000001,oparith8,pos10,val+9
273: 	fuzz/id000001,src000003,ophavoc,rep2
273: 	fuzz/id000002,src000000+000006,opsplice,rep64
273: 	fuzz/id000002,src000001,oparith8,pos10,val-31
273: 	fuzz/id000002,src000001,ophavoc,rep4
273: 	fuzz/id000003,src000001,ophavoc,rep2
273: 	fuzz/id000003,src000001,ophavoc,rep8
273: 	fuzz/id000003,src000007,ophavoc,rep2
273: 	fuzz/id000004,src000001,ophavoc,rep2
273: 	fuzz/id000004,src000001,ophavoc,rep32
273: 	fuzz/id000004,src000012,ophavoc,rep8
273: 	fuzz/id000005,src000001,ophavoc,rep2
273: 	fuzz/id000005,src000001,ophavoc,rep8
273: 	fuzz/id000005,src000013+000012,opsplice,rep4
273: 	fuzz/id000006,src000001,ophavoc,rep2
273: 	fuzz/id000006,src000001,ophavoc,rep4
273: 	fuzz/id000006,src000014,ophavoc,rep2
273: 	fuzz/id000007,src000002,opflip1,pos4
273: 	fuzz/id000007,src000023,ophavoc,rep4
273: 	fuzz/id000008,src000002,opflip1,pos8
273: 	fuzz/id000008,src000029,ophavoc,rep64
273: 	fuzz/id000009,src000002,opflip1,pos22
273: 	fuzz/id000009,src000031,ophavoc,rep2
273: 	fuzz/id000010,src000002,opflip1,pos25
273: 	fuzz/id000010,src000037+000017,opsplice,rep2
273: 	fuzz/id000011,src000002,opflip1,pos33
273: 	fuzz/id000011,src000046,ophavoc,rep2
273: 	fuzz/id000012,src000002,opflip4,pos20
273: 	fuzz/id000012,src000049,ophavoc,rep4
273: 	fuzz/id000013,src000002,opflip4,pos38
273: 	fuzz/id000013,src000048,ophavoc,rep2
273: 	fuzz/id000014,src000002,opflip4,pos76
273: 	fuzz/id000014,src000021+000026,opsplice,rep2
273: 	fuzz/id000015,src000002,opflip8,pos25
273: 	fuzz/id000015,src000056,ophavoc,rep2
273: 	fuzz/id000016,src000002,opint16,pos77,val-129
273: 	fuzz/id000016,src000002,opint8,pos14,val-1
273: 	fuzz/id000017,src000002,ophavoc,rep32
273: 	fuzz/id000017,src000002,opint16,pos77,val-129
273: 	fuzz/id000018,src000002,opint32,pos25,val+2147483647
273: 	fuzz/id000018,src000003,opint16,pos3,val-129
273: 	fuzz/id000019,src000002,opint32,pos33,valbe-128
273: 	fuzz/id000019,src000007,opflip16,pos33
273: 	fuzz/id000020,src000002,ophavoc,rep4
273: 	fuzz/id000020,src000007,opint16,pos117,val-129
273: 	fuzz/id000021,src000004,opint16,pos4,val+32767
273: 	fuzz/id000021,src000011,opflip4,pos76
273: 	fuzz/id000022,src000004,ophavoc,rep16
273: 	fuzz/id000022,src000011,opflip4,pos116
273: 	fuzz/id000023,src000011,opflip4,pos116
273: 	fuzz/id000023,src000018,opflip1,pos15
273: 	fuzz/id000024,src000011,opflip16,pos52
273: 	fuzz/id000024,src000018,opflip1,pos26
273: 	fuzz/id000025,src000018,opflip1,pos15
273: 	fuzz/id000025,src000018,opflip4,pos92
273: 	fuzz/id000026,src000018,opflip1,pos26
273: 	fuzz/id000026,src000018,opflip4,pos137
273: 	fuzz/id000027,src000018,opflip4,pos24
273: 	fuzz/id000028,src000018,opflip4,pos92
273: 	fuzz/id000029,src000018,opflip4,pos137
273: 	fuzz/id000030,src000018,opint16,pos138,val-129
273: 	fuzz/id000031,src000018,ophavoc,rep8
273: 
273: Fuzz_Hangs (0 s)
273: 
273: *** No errors detected (0 s total)
170/187 Test #273: Test_Align_samextract .............................   Passed    0.42 sec
test 275
        Start 275: Test_Align_Cache

275: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/align-cache/runtest.sh "/usr/include/ncbi-vdb" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "align-cache"
275: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/align-cache
275: Test timeout computed to be: 1500
275: testing align-cache
171/187 Test #275: Test_Align_Cache ..................................   Passed    0.36 sec
test 276
        Start 276: Test_KFF

276: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/Test_KFF
276: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/copycat
276: Test timeout computed to be: 1500
276: Running 2 test cases...
276: ExtFileFormat (0 s)
276: MagicFileFormat (0 s)
276: 
276: *** No errors detected (0 s total)
172/187 Test #276: Test_KFF ..........................................   Passed    0.01 sec
test 277
        Start 277: Test_Copycat_Help

277: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/copycat "-h"
277: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/copycat
277: Test timeout computed to be: 1500
277: 
277: Usage:
277:   copycat [options] src-file dst-file
277:   copycat [options] src-file [src-file...] dst-dir
277:   copycat [options] -o dst-dir src-file [src-file...]
277: 
277: Summary:
277:   Copies files and/or directories, creating a catalog of the copied files.
277:   -x|--cache-dir <dir-path>        location of output cached files 
277:   -f|--force                       force overwrite of existing files 
277:   -o|--output <file-path>          location of output 
277:   -e|--extract <dir-path>          location of extracted files 
277:   -E|--extract-to-dir              extracted directories match normal XML 
277:   -X|--xml-dir                     XML matches extracted files 
277:   --input-buffer <size-in-KB>      system file reads are of blocks of this size 
277:   --output-buffer <size-in-KB>     system file writes are of blocks of this 
277:                                    size 
277:   --no-bzip2                       do not decompress files compressed with 
277:                                    bzip2 
277:   --no-md5                         do not calculate md5 hashes 
277:   -h|--help                        Output brief explanation for the program. 
277:   -V|--version                     Display the version of the program then 
277:                                    quit. 
277:   -L|--log-level <level>           Logging level as number or enum string. One 
277:                                    of (fatal|sys|int|err|warn|info|debug) or 
277:                                    (0-6) Current/default is warn. 
277:   -v|--verbose                     Increase the verbosity of the program 
277:                                    status messages. Use multiple times for more 
277:                                    verbosity. Negates quiet. 
277:   -q|--quiet                       Turn off all status messages for the 
277:                                    program. Negated by verbose. 
277:   --option-file <file>             Read more options and parameters from the 
277:                                    file. 
277: Use:
277:  Copy and catalog:
277:   Some quick examples:
277:     copycat dir/file.tar other-dir/file.tar
277:       copy file.tar from dir to other-dir and write the catalog to stdout
277:     copycat dir/file.tar otherdir/
277:       the same
277:     copycat "ncbi-file:dir/file.tar.nenc?encrypt&pwfile=pw other-dir.file.tar
277:       copy and decrypt file.tar.nenc from dir to other-dir and catalog
277:     copycat dir/file.tar "ncbi-file:other-dir/file.tar.nenc?encrypt&pwfile=pw
277:       copy and encrypt file.tar from dir to other-dir/file.tar.nenc and catalog
277:     copycat "ncbi-file:dir/file.tar.nenc?encrypt&pwfile=pw1 \
277:                    "ncbi-file:other-dir/file.tar.nenc?encrypt&pwfile=pw2
277:       copy the file as above while changing the encryption
277: 
277: Use:
277:   Copy source file[s] to a destination file or directory.
277:   File names can either be typical path names or they can be URLs (IRLs) using
277:   the standard "file" or extended "ncbi-file" schemes.
277:   The catalog is XML output sent by default to stdout.
277:   As UTF-8 is accepted in the paths they are IRLs for International Resource
277:   Locators.
277: 
277:   If the specified destination does not exist, there could be an ambiguity
277:   whether the destination is supposed to be a file or directory.  If the
277:   entered path ends in a '/' character or if there is more than one source
277:   it is assumed to mean a directory and is created as such.  If neither of
277:   of those apply it is assumed to be a file.
277: 
277:   The sources or destination may also be special Unix devices:
277:     /dev/stdin is supported as a source.
277:     /dev/stdout and /dev/stderr is supported as a destination.
277:   Other file descriptor devices can be used in the form:
277:     /dev/fd/<fd-number>
277:   For example /dev/stdin is synonymous with /dev/fd/0 as a source.
277:   If /dev/stdout or /dev/fd/1 is used as the destination then the XML
277:   output is redirected to /dev/stderr (/dev/fd/2).
277:   Device /dev/null as the destination is treated as a file with only one
277:   source but as a directory if more than one source.  Using this device
277:   means no actual file will be copied but the cataloging will be done but
277:   xml-base-node must be used.
277: 
277:   These special devices can be entered using the URL (IRL) schemes if
277:   desired.  This allows the use of 'query' decorators.
277:   
277:   If a query is added to the URL it will need to be enclosed within '"'
277:   characters on a command line to prevent premature interpretation.
277:   The query for the 'ncbi-file' extension to the 'file' scheme allows
277:   encryption and decryption.  The supported query is introduced by the
277:   standard URI/IRI syntax of a '?' character with a '&' character
277:   separating individual query-entries.
277: 
277:   The supported query entries are:
277:     'encrypt' or 'enc' to mean the input may be encrypted or the output
277:       will be encrypted,
277:     'pwfile=<path>' gives the path to file containing the password.
277:     'pwfd=<FD>' gives the numerical file descriptor from which to read
277:       the password,
277: 
277:   In this program the encrypted input can apply to a file contained within
277:   the source rather than just the source file itself.  The tool is fully
277:   compatible with all versions of NCBI encryption.
277: 
277:   If the output is to be encrypted only the newer FIPS compliant encryption
277:   will be used and applies to the whole file.
277: 
277: NOTE: Not all combinations of URL specifications will work at this point.
277: 
277: NOTE: using the same file descriptor for multiple sources or overlapping with
277:       stdin/stdout/stderr may cause undefined behavior including hanging the
277:       the program.
277: 
277:   The '-x' option allows small files that are typed as eligible for
277:   caching to be copied to the cache directory provided. the directory
277:   will be created if necessary.
277:   the intent is to capture top-level files, such that files are copied
277:   into the flat cache directory without regard to where they were found
277:   in the input hierarchy. in the case of name conflict, output files will
277:   be renamed.
277: 
277:   To prevent internal decompression of bzipped files, use the option
277:     '--no-bzip2'
277: 
277:   To prevent calculation of MD5 hashes, use the option
277:     '--no-md5'
277: 
277: 
277: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/copycat : 3.0.9
277: 
173/187 Test #277: Test_Copycat_Help .................................   Passed    0.00 sec
test 278
        Start 278: Test_Copycat_Bad_Name

278: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/copycat/test-bad-name.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "copycat"
278: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/copycat
278: Test timeout computed to be: 1500
278: testing copycat expected output for file name with %
278: copycat test file name with % succeeded
174/187 Test #278: Test_Copycat_Bad_Name .............................   Passed    0.05 sec
test 279
        Start 279: Test_Copycat_IdenticalCopy

279: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/copycat/test-copy.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "copycat"
279: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/copycat
279: Test timeout computed to be: 1500
279: testing copycat copy
279: copycat copy succeeded
175/187 Test #279: Test_Copycat_IdenticalCopy ........................   Passed    0.12 sec
test 280
        Start 280: Test_Copycat_FastqParser

280: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/copycat/test-fastq.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "copycat"
280: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/copycat
280: Test timeout computed to be: 1500
280: testing copycat fastq parser
280: copycat fastq parser succeeded
176/187 Test #280: Test_Copycat_FastqParser ..........................   Passed    0.20 sec
test 281
        Start 281: Test_MakeReadFilter

281: Test command: /usr/bin/cmake "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/tmp" "/usr/bin/cmake" "-E" "env" "NCBI_SETTINGS=/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/tmp/tmp.mkfg" "/usr/bin/cmake" "-E" "env" "VDB_LIBRARY_PATH=/usr/lib/aarch64-linux-gnu" "./runtest.sh" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "/usr/lib/aarch64-linux-gnu" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/tmp" ""
281: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/make-read-filter
281: Test timeout computed to be: 1500
281: /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin /usr/lib/aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/test-bin/tmp
177/187 Test #281: Test_MakeReadFilter ...............................   Passed    0.40 sec
test 282
        Start 282: Test_Read_filter_redact_Check_exit_code

282: Test command: /usr/bin/python3 "/build/reproducible-path/sra-sdk-3.0.9+dfsg/build/check-exit-code.py" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/read-filter-redact"
282: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/read-filter-redact
282: Test timeout computed to be: 1500
282: [check-exit-code.py] test passed for [/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/read-filter-redact]
178/187 Test #282: Test_Read_filter_redact_Check_exit_code ...........   Passed    0.06 sec
test 283
        Start 283: Test_Read_filter_redact

283: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/read-filter-redact/runtests.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "read-filter-redact"
283: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/read-filter-redact
283: Test timeout computed to be: 1500
283: Testing read-filter-redact from /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin
179/187 Test #283: Test_Read_filter_redact ...........................   Passed    0.51 sec
test 284
        Start 284: Test_VDB_Copy_Check_exit_code

284: Test command: /usr/bin/python3 "/build/reproducible-path/sra-sdk-3.0.9+dfsg/build/check-exit-code.py" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-copy"
284: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/vdb-copy
284: Test timeout computed to be: 1500
284: [check-exit-code.py] test passed for [/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-copy]
180/187 Test #284: Test_VDB_Copy_Check_exit_code .....................   Passed    0.08 sec
test 286
        Start 286: Test_VDB_Copy_Should_Fail_On_Invalid_Accession

286: Test command: /usr/bin/bash "-c" "./return_code_on_error.sh /build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin"
286: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/vdb-copy
286: Test timeout computed to be: 1500
286: 2026-02-13T16:52:32 vdb-copy.3.0.9 int: item not found while copying within virtual database module -  the path 'NOT_EXISTING_DIR' cannot be opened as vdb-database or vdb-table
286: SUCCESS: vdb-copy returned 3 if ask to copy a none-existing object.
181/187 Test #286: Test_VDB_Copy_Should_Fail_On_Invalid_Accession ....   Passed    0.08 sec
test 288
        Start 288: Test_VDB_Diff_Check_exit_code

288: Test command: /usr/bin/python3 "/build/reproducible-path/sra-sdk-3.0.9+dfsg/build/check-exit-code.py" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-diff"
288: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/internal/vdb-diff
288: Test timeout computed to be: 1500
288: WARNING[TEST1] help message is in 'STDOUT'
288: [check-exit-code.py] test passed for [/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin/vdb-diff]
182/187 Test #288: Test_VDB_Diff_Check_exit_code .....................   Passed    0.06 sec
test 291
        Start 291: Test_qa-stat

291: Test command: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/test-tools/qa-stats/runtests.sh "/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/test-tools/qa-stats"
291: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/test-tools/qa-stats
291: Test timeout computed to be: 1500
291: Testing with default parameters.
291: Testing with one biological read.
291: Testing with one technical read.
291: Testing with two biological read.
291: Testing with one biological and one technical read.
291: Testing with multiple layouts.
183/187 Test #291: Test_qa-stat ......................................   Passed    2.07 sec
test 292
        Start 292: Test_Scripts_prepare-sra-names

292: Test command: /usr/bin/perl "test-prepare-sra-names.pl"
292: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/scripts
292: Test timeout computed to be: 1500
184/187 Test #292: Test_Scripts_prepare-sra-names ....................   Passed    0.18 sec
test 293
        Start 293: Test_Scripts_fix-sra-names

293: Test command: /usr/bin/perl "test-fix-sra-names.pl"
293: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/scripts
293: Test timeout computed to be: 1500
185/187 Test #293: Test_Scripts_fix-sra-names ........................   Passed    0.08 sec
test 294
        Start 294: Test_Scripts_prepare-sra-names-py

294: Test command: /usr/bin/perl "test-prepare-sra-names-py.pl"
294: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/scripts
294: Test timeout computed to be: 1500
186/187 Test #294: Test_Scripts_prepare-sra-names-py .................   Passed    0.82 sec
test 295
        Start 295: Test_Scripts_fix-sra-names-py

295: Test command: /usr/bin/perl "test-fix-sra-names-py.pl"
295: Working Directory: /build/reproducible-path/sra-sdk-3.0.9+dfsg/test/scripts
295: Test timeout computed to be: 1500
187/187 Test #295: Test_Scripts_fix-sra-names-py .....................   Passed    0.48 sec

100% tests passed, 0 tests failed out of 187

Total Test time (real) =  59.12 sec
make[1]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg'
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=cmake
   debian/rules override_dh_prep
make[1]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg'
dh_prep -X debian/tmp
make[1]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg'
   debian/rules override_dh_auto_install
make[1]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg'
dh_auto_install
	cd obj-aarch64-linux-gnu && make -j12 install DESTDIR=/build/reproducible-path/sra-sdk-3.0.9\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[2]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
/usr/bin/cmake -S/build/reproducible-path/sra-sdk-3.0.9+dfsg -B/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 preinstall
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'preinstall'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
mkdir: cannot create directory '/usr/bin/ncbi': Permission denied
cp: cannot create regular file '/usr/bin/ncbi/default.kfg': No such file or directory
mkdir: cannot create directory '/usr/bin/ncbi': Permission denied
cp: cannot create regular file '/usr/bin/ncbi/certs.kfg': No such file or directory
mkdir: cannot create directory '/usr/bin/ncbi': Permission denied
cp: cannot create regular file '/usr/bin/ncbi/vdb-copy.kfg': No such file or directory
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs-c++.a.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs-c++.a.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs-c++.a
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs-c++-static.a
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ncbi-vdb/NGS.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples/FragTest.cpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples/AlignTest.cpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples/AlignSliceTest.cpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples/PileupTest.cpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples/RefTest.cpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples/DumpReferenceFASTA.cpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples/expected.txt
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples/Makefile
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples/README.txt
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libngs-c++.a.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libngs-c++.a.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libngs-c++.a
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libngs-c++-static.a
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libngs-c++.so.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libngs-c++.so
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs.a.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs.a.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs.a
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs-static.a
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs.so.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs.so.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs.so
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/win
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/win/stdbool.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/win/atomic32.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/unix
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/unix/x86_64
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/unix/x86_64/atomic32.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/unix/i386
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/unix/i386/atomic32.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/unix/fat86
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/unix/fat86/atomic32.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/unix/arm64
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/unix/arm64/atomic32.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/defs.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/VTable.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/VTable.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/StringItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/StringItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/StatisticsItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/StatisticsItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/ReferenceSequenceItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/ReferenceSequenceItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/ReferenceItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/ReferenceItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/Refcount.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/Refcount.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/ReadItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/ReadItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/ReadGroupItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/ReadGroupItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/ReadCollectionItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/ReadCollectionItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/PileupItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/PileupItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/PileupEventItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/PileupEventItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/PackageItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/FragmentItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/FragmentItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/ErrorMsg.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/ErrBlock.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/ErrBlock.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/AlignmentItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/itf/AlignmentItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/inl
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/inl/StringRef.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/inl/Statistics.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/inl/ReferenceSequence.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/inl/ReferenceIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/inl/Reference.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/inl/ReadIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/inl/ReadGroupIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/inl/ReadGroup.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/inl/ReadCollection.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/inl/Read.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/inl/PileupIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/inl/PileupEventIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/inl/PileupEvent.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/inl/Pileup.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/inl/Package.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/inl/FragmentIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/inl/Fragment.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/inl/AlignmentIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/inl/Alignment.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/adapter
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/adapter/defs.h
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/adapter/StringItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/adapter/StatisticsItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/adapter/ReferenceSequenceItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/adapter/ReferenceItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/adapter/Refcount.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/adapter/ReadItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/adapter/ReadGroupItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/adapter/ReadCollectionItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/adapter/PileupItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/adapter/PileupEventItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/adapter/FragmentItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/adapter/ErrorMsg.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/adapter/AlignmentItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/StringRef.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/Statistics.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/ReferenceSequence.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/ReferenceIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/Reference.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/ReadIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/ReadGroupIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/ReadGroup.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/ReadCollection.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/Read.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/PileupIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/PileupEventIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/PileupEvent.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/Pileup.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/Package.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/FragmentIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/Fragment.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/ErrorMsg.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/AlignmentIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/include/ngs/Alignment.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/jar/ngs-java.jar
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples-java/examples/AlignTest.java
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples-java/examples/AlignSliceTest.java
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples-java/examples/FragTest.java
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples-java/examples/PileupTest.java
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples-java/examples/RefTest.java
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples-java/examples/ReadGroupTest.java
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples-java/examples/DumpReferenceFASTA.java
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples-java/Makefile
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples-java/README.txt
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples-java/expected.txt
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/jar/ngs-examples.jar
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/legal
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/legal/jquery.md
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/legal/jqueryUI.md
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/legal/ASSEMBLY_EXCEPTION
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/script-dir
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/script-dir/jquery-ui.min.css
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/script-dir/jquery-ui.min.js
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/script-dir/jquery-3.7.1.min.js
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/resources
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/resources/x.png
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/resources/glass.png
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/search-page.js
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/search.js
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/link.svg
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/copy.svg
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/script.js
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/stylesheet.css
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/help-doc.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/overview-summary.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/search.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/index-all.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/tag-search-index.js
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/member-search-index.js
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/type-search-index.js
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/package-search-index.js
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/module-search-index.js
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/allpackages-index.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/allclasses-index.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/index.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/overview-tree.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/serialized-form.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/constant-values.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/element-list
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/gov
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/gov/nih
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/gov/nih/nlm
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/gov/nih/nlm/ncbi
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/gov/nih/nlm/ncbi/ngs
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/gov/nih/nlm/ncbi/ngs/package-tree.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/gov/nih/nlm/ncbi/ngs/package-summary.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/gov/nih/nlm/ncbi/ngs/NGS.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/gov/nih/nlm/ncbi/ngs/LibDependencies.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/package-tree.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/package-summary.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/Statistics.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/ReferenceSequence.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/ReferenceIterator.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/Reference.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/ReadIterator.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/ReadGroupIterator.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/ReadGroup.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/ReadCollection.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/Read.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/PileupIterator.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/PileupEventIterator.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/PileupEvent.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/Pileup.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/Package.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/FragmentIterator.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/Fragment.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/ErrorMsg.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/AlignmentIterator.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/Alignment.html
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/jar/ngs-doc.jar
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/jar/ngs-src.jar
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples-python/AlignTest.py
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples-python/AlignSliceTest.py
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples-python/FragTest.py
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples-python/PileupTest.py
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples-python/RefTest.py
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples-python/expected.txt
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples-python/Makefile
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/share/examples-python/README.txt
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/prefetch
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/prefetch.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/prefetch-orig.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/prefetch.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-config.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-config.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-config
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/fastq-dump
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/fastq-dump.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/fastq-dump-orig.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/fastq-dump.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sff-dump.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sff-dump.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sff-dump
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/illumina-dump.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/illumina-dump.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/illumina-dump
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/abi-dump.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/abi-dump.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/abi-dump
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sra-pileup
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sra-pileup.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sra-pileup-orig.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sra-pileup.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sam-dump
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sam-dump.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sam-dump-orig.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sam-dump.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/fasterq-dump
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/fasterq-dump.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/fasterq-dump-orig.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/fasterq-dump.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-dump
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-dump.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-dump-orig.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-dump.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-validate.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-validate.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-validate
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/check-corrupt.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/check-corrupt.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/check-corrupt
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-decrypt.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-decrypt.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-decrypt
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-encrypt.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-encrypt.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-encrypt
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/srapath
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/srapath.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/srapath-orig.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/srapath.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sra-stat.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sra-stat.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sra-stat
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/ngs-pileup.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/ngs-pileup.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/ngs-pileup
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/rcexplain.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/rcexplain.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/rcexplain
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/kdbmeta.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/kdbmeta.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/kdbmeta
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/align-info.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/align-info.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/align-info
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/ref-variation.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/ref-variation.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/ref-variation
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/var-expand.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/var-expand.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/var-expand
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sra-search.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sra-search.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sra-search
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/test-sra.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/test-sra.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/test-sra
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/cache-mgr.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/cache-mgr.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/cache-mgr
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sratools.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sratools.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sratools
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sra-info.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sra-info.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sra-info
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/bam-load.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/bam-load.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/bam-load
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/samview.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/samview.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/samview
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/kar.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/kar.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/kar
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/kar+.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/kar+.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/kar+
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/kar+meta.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/kar+meta.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/kar+meta
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/dump-blob-boundaries.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/dump-blob-boundaries.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/dump-blob-boundaries
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sra-sort.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sra-sort.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sra-sort
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sra-sort-cg.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sra-sort-cg.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sra-sort-cg
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/latf-load.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/latf-load.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/latf-load
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sff-load.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sff-load.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sff-load
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/fastq-load.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/fastq-load.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/fastq-load
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/srf-load.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/srf-load.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/srf-load
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/abi-load.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/abi-load.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/abi-load
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/illumina-load.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/illumina-load.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/illumina-load
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/helicos-load.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/helicos-load.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/helicos-load
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/pacbio-loadxml.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/pacbio-loadxml.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/pacbio-loadxml
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/pacbio-load.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/pacbio-load.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/pacbio-load
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/cg-load.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/cg-load.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/cg-load
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/general-loader.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/general-loader.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/general-loader
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-lock.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-lock.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-lock
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-unlock.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-unlock.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-unlock
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/align-cache.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/align-cache.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/align-cache
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/ccextract.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/ccextract.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/ccextract
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/copycat.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/copycat.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/copycat
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/make-read-filter.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/make-read-filter.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/make-read-filter
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/md5cp.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/md5cp.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/md5cp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/meta-cmp.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/meta-cmp.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/meta-cmp
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/meta-copy.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/meta-copy.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/meta-copy
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/meta-repair.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/meta-repair.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/meta-repair
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/test-read-write-cursor.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/test-read-write-cursor.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/test-read-write-cursor
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/read-filter-redact.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/read-filter-redact.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/read-filter-redact
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-copy.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-copy.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-copy
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-diff.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-diff.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-diff
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-sql.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-sql.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/vdb-sql
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/fastconv.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/fastconv.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/fastconv
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/check-redact.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/check-redact.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/check-redact
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/crc32sum.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/crc32sum.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/crc32sum
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/test-download.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/test-download.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/test-download
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/kdb-index.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/kdb-index.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/kdb-index
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/pacbio-correct.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/pacbio-correct.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/pacbio-correct
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/schema-replace.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/schema-replace.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/schema-replace
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sortreadtest.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sortreadtest.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/sortreadtest
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/rowwritetest.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/rowwritetest.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/rowwritetest
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/samview-util.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/samview-util.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/samview-util
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/testld.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/testld.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/testld
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/txt2kdb.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/txt2kdb.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/txt2kdb
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/pileup-stats.3.0.9
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/pileup-stats.3
-- Installing: /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/bin/pileup-stats
make[2]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg/obj-aarch64-linux-gnu'
# build/install.sh /usr/include/ncbi-vdb/kfg/ncbi \
# 		 /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-copy \
# 		 debian/sra-toolkit/etc/ncbi \
# 		 debian/sra-toolkit/etc/ncbi \
# 		 debian/sra-toolkit/usr/bin \
# 		 debian/sra-toolkit/usr/lib/aarch64-linux-gnu \
# 		 /build/reproducible-path/sra-sdk-3.0.9+dfsg/shared/kfgsums
build/install-kfg.sh default.kfg /usr/include/ncbi-vdb/kfg/ncbi debian/sra-toolkit/etc/ncbi \
		     /usr/include/ncbi-vdb/kfg/ncbi/kfgsums
build/install-kfg.sh certs.kfg /usr/include/ncbi-vdb/kfg/ncbi debian/sra-toolkit/etc/ncbi \
		     /usr/include/ncbi-vdb/kfg/ncbi/kfgsums
build/install-kfg.sh vdb-copy.kfg /build/reproducible-path/sra-sdk-3.0.9+dfsg/tools/internal/vdb-copy \
		     debian/sra-toolkit/etc/ncbi /build/reproducible-path/sra-sdk-3.0.9+dfsg/shared/kfgsums
d-shlibmove --commit \
	    --multiarch \
	    --devunversioned \
	    --exclude-a \
	    --exclude-la \
	    --movedev "debian/*/usr/lib/aarch64-linux-gnu/libncbi-ngs.a*" \
		usr/lib/aarch64-linux-gnu \
	    --override "s/libncbi-vdb3-dev/libncbi-vdb-dev/" \
	    debian/*/usr/lib/aarch64-linux-gnu/libncbi-ngs.so
Library package automatic movement utility
 --> libncbi-vdb-dev package exists.
set -e
install -d -m 755 debian/libncbi-ngs-dev/usr/lib/aarch64-linux-gnu
install -d -m 755 debian/libncbi-ngs3/usr/lib/aarch64-linux-gnu
mv debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs.so debian/libncbi-ngs-dev/usr/lib/aarch64-linux-gnu
mv /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs.so.3 debian/libncbi-ngs3/usr/lib/aarch64-linux-gnu
mv /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs.so.3.0.9 debian/libncbi-ngs3/usr/lib/aarch64-linux-gnu
PKGDEV=libncbi-ngs-dev
PKGSHL=libncbi-ngs3
install -d -m 755 debian/libncbi-ngs-dev/usr/lib/aarch64-linux-gnu
mv debian/*/usr/lib/aarch64-linux-gnu/libncbi-ngs.a* debian/libncbi-ngs-dev/usr/lib/aarch64-linux-gnu
d-shlibmove --commit \
	    --multiarch \
	    --devunversioned \
	    --exclude-a \
	    --exclude-la \
	    --movedev "debian/*/usr/lib/aarch64-linux-gnu/lib*c++.a*" \
		usr/lib/aarch64-linux-gnu \
	    --movedev "debian/tmp/usr/include/*" usr/include \
	    --ignorelibdep \
	    debian/*/usr/lib/aarch64-linux-gnu/libngs-c++.so | \
	tee /dev/stderr | LC_ALL=C grep '^[a-z]' | sh
tee: /dev/stderr: Permission denied
Error occurred, aborting
make[1]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg'
   debian/rules override_dh_install
make[1]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg'
# upstream installs versioned *.a libs - we only want a single version
for d in debian/lib*-dev/usr/lib/aarch64-linux-gnu ; do \
    for slib in $d/lib*.a ; do \
	mv $d/`readlink $slib` $slib ; \
	mv $d/`readlink $slib` $slib ; \
    done ; \
done
ls -l debian/tmp/usr/bin
total 68920
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 abi-dump -> abi-dump.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 abi-dump.3 -> abi-dump.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   311104 Feb 13 04:49 abi-dump.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 abi-load -> abi-load.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 abi-load.3 -> abi-load.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   669840 Feb 13 04:49 abi-load.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 Feb 13 04:52 align-cache -> align-cache.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       17 Feb 13 04:52 align-cache.3 -> align-cache.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   284776 Feb 13 04:49 align-cache.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       12 Feb 13 04:52 align-info -> align-info.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 Feb 13 04:52 align-info.3 -> align-info.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   112752 Feb 13 04:49 align-info.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 bam-load -> bam-load.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 bam-load.3 -> bam-load.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1 12980008 Feb 13 04:50 bam-load.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       11 Feb 13 04:52 cache-mgr -> cache-mgr.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 Feb 13 04:52 cache-mgr.3 -> cache-mgr.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   132824 Feb 13 04:49 cache-mgr.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       11 Feb 13 04:52 ccextract -> ccextract.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 Feb 13 04:52 ccextract.3 -> ccextract.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   319072 Feb 13 04:49 ccextract.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1        9 Feb 13 04:52 cg-load -> cg-load.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 Feb 13 04:52 cg-load.3 -> cg-load.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   692560 Feb 13 04:49 cg-load.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 Feb 13 04:52 check-corrupt -> check-corrupt.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       19 Feb 13 04:52 check-corrupt.3 -> check-corrupt.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   286952 Feb 13 04:49 check-corrupt.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 check-redact -> check-redact.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       18 Feb 13 04:52 check-redact.3 -> check-redact.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   112624 Feb 13 04:49 check-redact.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1        9 Feb 13 04:52 copycat -> copycat.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 Feb 13 04:52 copycat.3 -> copycat.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   553360 Feb 13 04:49 copycat.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 crc32sum -> crc32sum.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 crc32sum.3 -> crc32sum.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1    99424 Feb 13 04:49 crc32sum.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       22 Feb 13 04:52 dump-blob-boundaries -> dump-blob-boundaries.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       26 Feb 13 04:52 dump-blob-boundaries.3 -> dump-blob-boundaries.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1    87176 Feb 13 04:49 dump-blob-boundaries.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 fastconv -> fastconv.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 fastconv.3 -> fastconv.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1  5166360 Feb 13 04:50 fastconv.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 fasterq-dump -> fasterq-dump.3
-rwxr-xr-x 1 pbuilder1 pbuilder1   951568 Feb 13 04:49 fasterq-dump-orig.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       18 Feb 13 04:52 fasterq-dump.3 -> fasterq-dump.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 fasterq-dump.3.0.9 -> sratools.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       12 Feb 13 04:52 fastq-dump -> fastq-dump.3
-rwxr-xr-x 1 pbuilder1 pbuilder1   370744 Feb 13 04:49 fastq-dump-orig.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 Feb 13 04:52 fastq-dump.3 -> fastq-dump.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 fastq-dump.3.0.9 -> sratools.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       12 Feb 13 04:52 fastq-load -> fastq-load.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 Feb 13 04:52 fastq-load.3 -> fastq-load.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   775360 Feb 13 04:49 fastq-load.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 Feb 13 04:52 general-loader -> general-loader.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       20 Feb 13 04:52 general-loader.3 -> general-loader.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1  1367736 Feb 13 04:49 general-loader.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 helicos-load -> helicos-load.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       18 Feb 13 04:52 helicos-load.3 -> helicos-load.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   644424 Feb 13 04:49 helicos-load.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 Feb 13 04:52 illumina-dump -> illumina-dump.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       19 Feb 13 04:52 illumina-dump.3 -> illumina-dump.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   295864 Feb 13 04:49 illumina-dump.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 Feb 13 04:52 illumina-load -> illumina-load.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       19 Feb 13 04:52 illumina-load.3 -> illumina-load.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   676416 Feb 13 04:49 illumina-load.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1        5 Feb 13 04:52 kar -> kar.3
lrwxrwxrwx 1 pbuilder1 pbuilder1        6 Feb 13 04:52 kar+ -> kar+.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 kar+.3 -> kar+.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   284104 Feb 13 04:49 kar+.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 kar+meta -> kar+meta.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 kar+meta.3 -> kar+meta.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   163576 Feb 13 04:49 kar+meta.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1        9 Feb 13 04:52 kar.3 -> kar.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   245184 Feb 13 04:49 kar.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       11 Feb 13 04:52 kdb-index -> kdb-index.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 Feb 13 04:52 kdb-index.3 -> kdb-index.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1    98080 Feb 13 04:49 kdb-index.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1        9 Feb 13 04:52 kdbmeta -> kdbmeta.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 Feb 13 04:52 kdbmeta.3 -> kdbmeta.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   127112 Feb 13 04:49 kdbmeta.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       11 Feb 13 04:52 latf-load -> latf-load.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 Feb 13 04:52 latf-load.3 -> latf-load.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   561408 Feb 13 04:50 latf-load.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       18 Feb 13 04:52 make-read-filter -> make-read-filter.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       22 Feb 13 04:52 make-read-filter.3 -> make-read-filter.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   158728 Feb 13 04:49 make-read-filter.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1        7 Feb 13 04:52 md5cp -> md5cp.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       11 Feb 13 04:52 md5cp.3 -> md5cp.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   109408 Feb 13 04:49 md5cp.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 meta-cmp -> meta-cmp.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 meta-cmp.3 -> meta-cmp.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   101352 Feb 13 04:49 meta-cmp.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       11 Feb 13 04:52 meta-copy -> meta-copy.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 Feb 13 04:52 meta-copy.3 -> meta-copy.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   101328 Feb 13 04:49 meta-copy.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 Feb 13 04:52 meta-repair -> meta-repair.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       17 Feb 13 04:52 meta-repair.3 -> meta-repair.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   200880 Feb 13 04:49 meta-repair.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       12 Feb 13 04:52 ngs-pileup -> ngs-pileup.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 Feb 13 04:52 ngs-pileup.3 -> ngs-pileup.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1  2632144 Feb 13 04:50 ngs-pileup.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 Feb 13 04:52 pacbio-correct -> pacbio-correct.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       20 Feb 13 04:52 pacbio-correct.3 -> pacbio-correct.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1    95200 Feb 13 04:49 pacbio-correct.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 Feb 13 04:52 pacbio-load -> pacbio-load.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       17 Feb 13 04:52 pacbio-load.3 -> pacbio-load.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   540040 Feb 13 04:49 pacbio-load.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 Feb 13 04:52 pacbio-loadxml -> pacbio-loadxml.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       20 Feb 13 04:52 pacbio-loadxml.3 -> pacbio-loadxml.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   631552 Feb 13 04:49 pacbio-loadxml.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 pileup-stats -> pileup-stats.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       18 Feb 13 04:52 pileup-stats.3 -> pileup-stats.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1  2816320 Feb 13 04:50 pileup-stats.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 prefetch -> prefetch.3
-rwxr-xr-x 1 pbuilder1 pbuilder1   519728 Feb 13 04:50 prefetch-orig.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 prefetch.3 -> prefetch.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 prefetch.3.0.9 -> sratools.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       11 Feb 13 04:52 rcexplain -> rcexplain.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 Feb 13 04:52 rcexplain.3 -> rcexplain.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1    90840 Feb 13 04:49 rcexplain.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       20 Feb 13 04:52 read-filter-redact -> read-filter-redact.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       24 Feb 13 04:52 read-filter-redact.3 -> read-filter-redact.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   123296 Feb 13 04:49 read-filter-redact.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 Feb 13 04:52 ref-variation -> ref-variation.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       19 Feb 13 04:52 ref-variation.3 -> ref-variation.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1  2953232 Feb 13 04:50 ref-variation.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 rowwritetest -> rowwritetest.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       18 Feb 13 04:52 rowwritetest.3 -> rowwritetest.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   108288 Feb 13 04:49 rowwritetest.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 sam-dump -> sam-dump.3
-rwxr-xr-x 1 pbuilder1 pbuilder1   889096 Feb 13 04:49 sam-dump-orig.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 sam-dump.3 -> sam-dump.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 sam-dump.3.0.9 -> sratools.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1        9 Feb 13 04:52 samview -> samview.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 samview-util -> samview-util.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       18 Feb 13 04:52 samview-util.3 -> samview-util.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1    87528 Feb 13 04:49 samview-util.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 Feb 13 04:52 samview.3 -> samview.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   304416 Feb 13 04:49 samview.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 Feb 13 04:52 schema-replace -> schema-replace.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       20 Feb 13 04:52 schema-replace.3 -> schema-replace.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   102136 Feb 13 04:49 schema-replace.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 sff-dump -> sff-dump.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 sff-dump.3 -> sff-dump.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   283288 Feb 13 04:49 sff-dump.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 sff-load -> sff-load.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 sff-load.3 -> sff-load.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   675928 Feb 13 04:49 sff-load.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 sortreadtest -> sortreadtest.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       18 Feb 13 04:52 sortreadtest.3 -> sortreadtest.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1    99024 Feb 13 04:49 sortreadtest.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 sra-info -> sra-info.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 sra-info.3 -> sra-info.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1  2240104 Feb 13 04:49 sra-info.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       12 Feb 13 04:52 sra-pileup -> sra-pileup.3
-rwxr-xr-x 1 pbuilder1 pbuilder1   459072 Feb 13 04:49 sra-pileup-orig.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 Feb 13 04:52 sra-pileup.3 -> sra-pileup.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 sra-pileup.3.0.9 -> sratools.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       12 Feb 13 04:52 sra-search -> sra-search.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 Feb 13 04:52 sra-search.3 -> sra-search.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1  4070504 Feb 13 04:50 sra-search.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 sra-sort -> sra-sort.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 Feb 13 04:52 sra-sort-cg -> sra-sort-cg.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       17 Feb 13 04:52 sra-sort-cg.3 -> sra-sort-cg.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   851616 Feb 13 04:49 sra-sort-cg.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 sra-sort.3 -> sra-sort.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   851640 Feb 13 04:49 sra-sort.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 sra-stat -> sra-stat.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 sra-stat.3 -> sra-stat.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   348224 Feb 13 04:49 sra-stat.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1        9 Feb 13 04:52 srapath -> srapath.3
-rwxr-xr-x 1 pbuilder1 pbuilder1   296360 Feb 13 04:49 srapath-orig.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 Feb 13 04:52 srapath.3 -> srapath.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 srapath.3.0.9 -> sratools.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 sratools -> sratools.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 sratools.3 -> sratools.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1  5056128 Feb 13 04:49 sratools.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 srf-load -> srf-load.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 srf-load.3 -> srf-load.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   886208 Feb 13 04:49 srf-load.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 Feb 13 04:52 test-download -> test-download.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       19 Feb 13 04:52 test-download.3 -> test-download.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   108952 Feb 13 04:49 test-download.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       24 Feb 13 04:52 test-read-write-cursor -> test-read-write-cursor.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       28 Feb 13 04:52 test-read-write-cursor.3 -> test-read-write-cursor.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1    94864 Feb 13 04:49 test-read-write-cursor.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 test-sra -> test-sra.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 test-sra.3 -> test-sra.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   354608 Feb 13 04:49 test-sra.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1        8 Feb 13 04:52 testld -> testld.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       12 Feb 13 04:52 testld.3 -> testld.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1    95888 Feb 13 04:49 testld.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1        9 Feb 13 04:52 txt2kdb -> txt2kdb.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 Feb 13 04:52 txt2kdb.3 -> txt2kdb.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   102320 Feb 13 04:49 txt2kdb.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       12 Feb 13 04:52 var-expand -> var-expand.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 Feb 13 04:52 var-expand.3 -> var-expand.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1  2073096 Feb 13 04:50 var-expand.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       12 Feb 13 04:52 vdb-config -> vdb-config.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 Feb 13 04:52 vdb-config.3 -> vdb-config.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1  2907064 Feb 13 04:50 vdb-config.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 vdb-copy -> vdb-copy.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 vdb-copy.3 -> vdb-copy.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   356664 Feb 13 04:49 vdb-copy.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 Feb 13 04:52 vdb-decrypt -> vdb-decrypt.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       17 Feb 13 04:52 vdb-decrypt.3 -> vdb-decrypt.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   128752 Feb 13 04:49 vdb-decrypt.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 vdb-diff -> vdb-diff.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 vdb-diff.3 -> vdb-diff.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   159832 Feb 13 04:49 vdb-diff.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 vdb-dump -> vdb-dump.3
-rwxr-xr-x 1 pbuilder1 pbuilder1   947072 Feb 13 04:49 vdb-dump-orig.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 vdb-dump.3 -> vdb-dump.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 vdb-dump.3.0.9 -> sratools.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 Feb 13 04:52 vdb-encrypt -> vdb-encrypt.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       17 Feb 13 04:52 vdb-encrypt.3 -> vdb-encrypt.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   127320 Feb 13 04:49 vdb-encrypt.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 Feb 13 04:52 vdb-lock -> vdb-lock.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 vdb-lock.3 -> vdb-lock.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1    91648 Feb 13 04:49 vdb-lock.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1        9 Feb 13 04:52 vdb-sql -> vdb-sql.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 Feb 13 04:52 vdb-sql.3 -> vdb-sql.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1  5419528 Feb 13 04:50 vdb-sql.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       12 Feb 13 04:52 vdb-unlock -> vdb-unlock.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 Feb 13 04:52 vdb-unlock.3 -> vdb-unlock.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1    91672 Feb 13 04:49 vdb-unlock.3.0.9
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 Feb 13 04:52 vdb-validate -> vdb-validate.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       18 Feb 13 04:52 vdb-validate.3 -> vdb-validate.3.0.9
-rwxr-xr-x 1 pbuilder1 pbuilder1   287672 Feb 13 04:49 vdb-validate.3.0.9
cd debian/tmp/usr/bin && \
for bin in *-orig.* ; do \
    base=${bin%-orig.*} && \
    vbase=$(readlink "$(readlink $base)") && \
    vdriver=$(readlink "$vbase") && \
    mv -v $bin $base-orig && \
    ln -snfv ${vdriver%%.[0-9]*} $vbase || exit $? ; \
done && \
for bin in *[a-z+] ; do \
    bin2=$(readlink $bin) ; \
    bin3=$(readlink "$bin2") ; \
    case $bin2 in \
        $bin.* ) rm -v $bin2 && mv -v $bin3 $bin || exit $? ;; \
    esac ; \
done
renamed 'fasterq-dump-orig.3.0.9' -> 'fasterq-dump-orig'
'fasterq-dump.3.0.9' -> 'sratools'
renamed 'fastq-dump-orig.3.0.9' -> 'fastq-dump-orig'
'fastq-dump.3.0.9' -> 'sratools'
renamed 'prefetch-orig.3.0.9' -> 'prefetch-orig'
'prefetch.3.0.9' -> 'sratools'
renamed 'sam-dump-orig.3.0.9' -> 'sam-dump-orig'
'sam-dump.3.0.9' -> 'sratools'
renamed 'sra-pileup-orig.3.0.9' -> 'sra-pileup-orig'
'sra-pileup.3.0.9' -> 'sratools'
renamed 'srapath-orig.3.0.9' -> 'srapath-orig'
'srapath.3.0.9' -> 'sratools'
renamed 'vdb-dump-orig.3.0.9' -> 'vdb-dump-orig'
'vdb-dump.3.0.9' -> 'sratools'
removed 'abi-dump.3'
renamed 'abi-dump.3.0.9' -> 'abi-dump'
removed 'abi-load.3'
renamed 'abi-load.3.0.9' -> 'abi-load'
removed 'align-cache.3'
renamed 'align-cache.3.0.9' -> 'align-cache'
removed 'align-info.3'
renamed 'align-info.3.0.9' -> 'align-info'
removed 'bam-load.3'
renamed 'bam-load.3.0.9' -> 'bam-load'
removed 'cache-mgr.3'
renamed 'cache-mgr.3.0.9' -> 'cache-mgr'
removed 'ccextract.3'
renamed 'ccextract.3.0.9' -> 'ccextract'
removed 'cg-load.3'
renamed 'cg-load.3.0.9' -> 'cg-load'
removed 'check-corrupt.3'
renamed 'check-corrupt.3.0.9' -> 'check-corrupt'
removed 'check-redact.3'
renamed 'check-redact.3.0.9' -> 'check-redact'
removed 'copycat.3'
renamed 'copycat.3.0.9' -> 'copycat'
removed 'crc32sum.3'
renamed 'crc32sum.3.0.9' -> 'crc32sum'
removed 'dump-blob-boundaries.3'
renamed 'dump-blob-boundaries.3.0.9' -> 'dump-blob-boundaries'
removed 'fastconv.3'
renamed 'fastconv.3.0.9' -> 'fastconv'
removed 'fasterq-dump.3'
renamed 'fasterq-dump.3.0.9' -> 'fasterq-dump'
removed 'fastq-dump.3'
renamed 'fastq-dump.3.0.9' -> 'fastq-dump'
removed 'fastq-load.3'
renamed 'fastq-load.3.0.9' -> 'fastq-load'
removed 'general-loader.3'
renamed 'general-loader.3.0.9' -> 'general-loader'
removed 'helicos-load.3'
renamed 'helicos-load.3.0.9' -> 'helicos-load'
removed 'illumina-dump.3'
renamed 'illumina-dump.3.0.9' -> 'illumina-dump'
removed 'illumina-load.3'
renamed 'illumina-load.3.0.9' -> 'illumina-load'
removed 'kar.3'
renamed 'kar.3.0.9' -> 'kar'
removed 'kar+.3'
renamed 'kar+.3.0.9' -> 'kar+'
removed 'kar+meta.3'
renamed 'kar+meta.3.0.9' -> 'kar+meta'
removed 'kdb-index.3'
renamed 'kdb-index.3.0.9' -> 'kdb-index'
removed 'kdbmeta.3'
renamed 'kdbmeta.3.0.9' -> 'kdbmeta'
removed 'latf-load.3'
renamed 'latf-load.3.0.9' -> 'latf-load'
removed 'make-read-filter.3'
renamed 'make-read-filter.3.0.9' -> 'make-read-filter'
removed 'md5cp.3'
renamed 'md5cp.3.0.9' -> 'md5cp'
removed 'meta-cmp.3'
renamed 'meta-cmp.3.0.9' -> 'meta-cmp'
removed 'meta-copy.3'
renamed 'meta-copy.3.0.9' -> 'meta-copy'
removed 'meta-repair.3'
renamed 'meta-repair.3.0.9' -> 'meta-repair'
removed 'ngs-pileup.3'
renamed 'ngs-pileup.3.0.9' -> 'ngs-pileup'
removed 'pacbio-correct.3'
renamed 'pacbio-correct.3.0.9' -> 'pacbio-correct'
removed 'pacbio-load.3'
renamed 'pacbio-load.3.0.9' -> 'pacbio-load'
removed 'pacbio-loadxml.3'
renamed 'pacbio-loadxml.3.0.9' -> 'pacbio-loadxml'
removed 'pileup-stats.3'
renamed 'pileup-stats.3.0.9' -> 'pileup-stats'
removed 'prefetch.3'
renamed 'prefetch.3.0.9' -> 'prefetch'
removed 'rcexplain.3'
renamed 'rcexplain.3.0.9' -> 'rcexplain'
removed 'read-filter-redact.3'
renamed 'read-filter-redact.3.0.9' -> 'read-filter-redact'
removed 'ref-variation.3'
renamed 'ref-variation.3.0.9' -> 'ref-variation'
removed 'rowwritetest.3'
renamed 'rowwritetest.3.0.9' -> 'rowwritetest'
removed 'sam-dump.3'
renamed 'sam-dump.3.0.9' -> 'sam-dump'
removed 'samview.3'
renamed 'samview.3.0.9' -> 'samview'
removed 'samview-util.3'
renamed 'samview-util.3.0.9' -> 'samview-util'
removed 'schema-replace.3'
renamed 'schema-replace.3.0.9' -> 'schema-replace'
removed 'sff-dump.3'
renamed 'sff-dump.3.0.9' -> 'sff-dump'
removed 'sff-load.3'
renamed 'sff-load.3.0.9' -> 'sff-load'
removed 'sortreadtest.3'
renamed 'sortreadtest.3.0.9' -> 'sortreadtest'
removed 'sra-info.3'
renamed 'sra-info.3.0.9' -> 'sra-info'
removed 'sra-pileup.3'
renamed 'sra-pileup.3.0.9' -> 'sra-pileup'
removed 'sra-search.3'
renamed 'sra-search.3.0.9' -> 'sra-search'
removed 'sra-sort.3'
renamed 'sra-sort.3.0.9' -> 'sra-sort'
removed 'sra-sort-cg.3'
renamed 'sra-sort-cg.3.0.9' -> 'sra-sort-cg'
removed 'sra-stat.3'
renamed 'sra-stat.3.0.9' -> 'sra-stat'
removed 'srapath.3'
renamed 'srapath.3.0.9' -> 'srapath'
removed 'sratools.3'
renamed 'sratools.3.0.9' -> 'sratools'
removed 'srf-load.3'
renamed 'srf-load.3.0.9' -> 'srf-load'
removed 'test-download.3'
renamed 'test-download.3.0.9' -> 'test-download'
removed 'test-read-write-cursor.3'
renamed 'test-read-write-cursor.3.0.9' -> 'test-read-write-cursor'
removed 'test-sra.3'
renamed 'test-sra.3.0.9' -> 'test-sra'
removed 'testld.3'
renamed 'testld.3.0.9' -> 'testld'
removed 'txt2kdb.3'
renamed 'txt2kdb.3.0.9' -> 'txt2kdb'
removed 'var-expand.3'
renamed 'var-expand.3.0.9' -> 'var-expand'
removed 'vdb-config.3'
renamed 'vdb-config.3.0.9' -> 'vdb-config'
removed 'vdb-copy.3'
renamed 'vdb-copy.3.0.9' -> 'vdb-copy'
removed 'vdb-decrypt.3'
renamed 'vdb-decrypt.3.0.9' -> 'vdb-decrypt'
removed 'vdb-diff.3'
renamed 'vdb-diff.3.0.9' -> 'vdb-diff'
removed 'vdb-dump.3'
renamed 'vdb-dump.3.0.9' -> 'vdb-dump'
removed 'vdb-encrypt.3'
renamed 'vdb-encrypt.3.0.9' -> 'vdb-encrypt'
removed 'vdb-lock.3'
renamed 'vdb-lock.3.0.9' -> 'vdb-lock'
removed 'vdb-sql.3'
renamed 'vdb-sql.3.0.9' -> 'vdb-sql'
removed 'vdb-unlock.3'
renamed 'vdb-unlock.3.0.9' -> 'vdb-unlock'
removed 'vdb-validate.3'
renamed 'vdb-validate.3.0.9' -> 'vdb-validate'
mkdir debian/tmp/usr/lib/sra-toolkit
mv debian/tmp/usr/bin/sratools debian/tmp/usr/lib/sra-toolkit
for x in debian/tmp/usr/bin/*-orig; do \
    mv -v $x debian/tmp/usr/lib/sra-toolkit ; \
    ln -snfv ../lib/sra-toolkit/sratools ${x%-orig} ; \
done
renamed 'debian/tmp/usr/bin/fasterq-dump-orig' -> 'debian/tmp/usr/lib/sra-toolkit/fasterq-dump-orig'
'debian/tmp/usr/bin/fasterq-dump' -> '../lib/sra-toolkit/sratools'
renamed 'debian/tmp/usr/bin/fastq-dump-orig' -> 'debian/tmp/usr/lib/sra-toolkit/fastq-dump-orig'
'debian/tmp/usr/bin/fastq-dump' -> '../lib/sra-toolkit/sratools'
renamed 'debian/tmp/usr/bin/prefetch-orig' -> 'debian/tmp/usr/lib/sra-toolkit/prefetch-orig'
'debian/tmp/usr/bin/prefetch' -> '../lib/sra-toolkit/sratools'
renamed 'debian/tmp/usr/bin/sam-dump-orig' -> 'debian/tmp/usr/lib/sra-toolkit/sam-dump-orig'
'debian/tmp/usr/bin/sam-dump' -> '../lib/sra-toolkit/sratools'
renamed 'debian/tmp/usr/bin/sra-pileup-orig' -> 'debian/tmp/usr/lib/sra-toolkit/sra-pileup-orig'
'debian/tmp/usr/bin/sra-pileup' -> '../lib/sra-toolkit/sratools'
renamed 'debian/tmp/usr/bin/srapath-orig' -> 'debian/tmp/usr/lib/sra-toolkit/srapath-orig'
'debian/tmp/usr/bin/srapath' -> '../lib/sra-toolkit/sratools'
renamed 'debian/tmp/usr/bin/vdb-dump-orig' -> 'debian/tmp/usr/lib/sra-toolkit/vdb-dump-orig'
'debian/tmp/usr/bin/vdb-dump' -> '../lib/sra-toolkit/sratools'
dh_install
# remove susipcious file which is not executable and conflicts with package magic
rm -f debian/*/usr/bin/magic
# Formally supply a standard installation ID to satisfy sratools
echo '/LIBS/GUID = "806b5c3b-0088-4732-8359-51630950d723"' >debian/sra-toolkit/etc/ncbi/debian.kfg
set -e && for i in 3.12 3.13; do \
    cd ngs/ngs-python; \
    python$i ./setup.py install --install-layout=deb \
        --root /build/reproducible-path/sra-sdk-3.0.9+dfsg/debian/python3-ngs; \
    cd ../..; \
done
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` directly.
        Instead, use pypa/build, pypa/installer or other
        standards-based tools.

        See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
        ********************************************************************************

!!
  self.initialize_options()
/usr/lib/python3/dist-packages/ngs/LibManager.py:123: SyntaxWarning: invalid escape sequence '\.'
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` directly.
        Instead, use pypa/build, pypa/installer or other
        standards-based tools.

        See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
        ********************************************************************************

!!
  self.initialize_options()
/usr/lib/python3/dist-packages/ngs/LibManager.py:123: SyntaxWarning: invalid escape sequence '\.'
find debian -name "*.pyc" -delete
find debian -type d -name __pycache__ | xargs rm -rf
make[1]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg'
   jh_installjavadoc -O--buildsystem=cmake
Duplicate specification "A" for option "A"
   dh_installdocs -O--buildsystem=cmake
   dh_installchangelogs -O--buildsystem=cmake
   debian/rules override_dh_installexamples
make[1]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg'
dh_installexamples
find debian/*/ -name .gitignore -delete
make[1]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg'
   dh_python3 -O--buildsystem=cmake
   dh_installsystemduser -O--buildsystem=cmake
   dh_lintian -O--buildsystem=cmake
   dh_perl -O--buildsystem=cmake
   debian/rules execute_before_dh_link
make[1]: Entering directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg'
# Putting the upstream version number (without the dfsg part) at the end of
# symlink source in the -jni package.
sed -e 's/\(#STRIPPED_UPSTREAM_VERSION#\)/\13.0.9+dfsg/' \
    -e 's/#STRIPPED_UPSTREAM_VERSION#\(.*\)+dfsg[0-9]*/\1/' \
    -e 's/\$[({]DEB_HOST_MULTIARCH[)}]/aarch64-linux-gnu/g' \
    debian/libngs-jni.links.in > debian/libngs-jni.links
make[1]: Leaving directory '/build/reproducible-path/sra-sdk-3.0.9+dfsg'
   dh_link -O--buildsystem=cmake
   jh_installlibs -O--buildsystem=cmake
   jh_classpath -O--buildsystem=cmake
   jh_manifest -O--buildsystem=cmake
Duplicate specification "version|V" for option "V"
   jh_exec -O--buildsystem=cmake
   jh_depends -O--buildsystem=cmake
   mh_installpoms -O--buildsystem=cmake
   mh_linkjars --skip-clean-poms -O--buildsystem=cmake
   dh_strip_nondeterminism -O--buildsystem=cmake
   dh_compress -O--buildsystem=cmake
   dh_fixperms -O--buildsystem=cmake
   dh_missing -O--buildsystem=cmake
   dh_dwz -a -O--buildsystem=cmake
   dh_strip -a -O--buildsystem=cmake
   dh_makeshlibs -a -O--buildsystem=cmake
   dh_shlibdeps -a -O--buildsystem=cmake
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 from: /lib/ld-linux-aarch64.so.1
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 from: /lib/ld-linux-aarch64.so.1
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged
dpkg-shlibdeps: warning: symbol VFSManagerMake used by debian/libngs-c++3/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.0.9 found in none of the libraries
dpkg-shlibdeps: warning: symbol KClientHttpResultStatus used by debian/libngs-c++3/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.0.9 found in none of the libraries
dpkg-shlibdeps: warning: symbol KNSManagerMakeClientRequest used by debian/libngs-c++3/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.0.9 found in none of the libraries
dpkg-shlibdeps: warning: symbol KMDataNodeRelease used by debian/libngs-c++3/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.0.9 found in none of the libraries
dpkg-shlibdeps: warning: symbol KVectorRelease used by debian/libngs-c++3/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.0.9 found in none of the libraries
dpkg-shlibdeps: warning: symbol KMDataNodeListChildren used by debian/libngs-c++3/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.0.9 found in none of the libraries
dpkg-shlibdeps: warning: symbol KRepositoryMgrRelease used by debian/libngs-c++3/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.0.9 found in none of the libraries
dpkg-shlibdeps: warning: symbol KDataBufferWhack used by debian/libngs-c++3/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.0.9 found in none of the libraries
dpkg-shlibdeps: warning: symbol VDBManagerOpenTableRead used by debian/libngs-c++3/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.0.9 found in none of the libraries
dpkg-shlibdeps: warning: symbol VCursorOpenParentRead used by debian/libngs-c++3/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.0.9 found in none of the libraries
dpkg-shlibdeps: warning: 133 other similar warnings have been skipped (use -v to see them all)
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 from: /lib/ld-linux-aarch64.so.1
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged
   dh_installdeb -O--buildsystem=cmake
   dh_gencontrol -O--buildsystem=cmake
dpkg-gencontrol: warning: Depends field of package libngs-jni: substitution variable ${shlibs:Depends} used, but is not defined
dpkg-gencontrol: warning: package libncbi-ngs-dev: substitution variable ${devlibs:Depends} unused, but is defined
   dh_md5sums -O--buildsystem=cmake
   dh_builddeb -O--buildsystem=cmake
dpkg-deb: building package 'sra-toolkit' in '../sra-toolkit_3.0.9+dfsg-7_arm64.deb'.
dpkg-deb: building package 'sra-toolkit-dbgsym' in '../sra-toolkit-dbgsym_3.0.9+dfsg-7_arm64.deb'.
dpkg-deb: building package 'libngs-c++3' in '../libngs-c++3_3.0.9+dfsg-7_arm64.deb'.
dpkg-deb: building package 'libngs-c++3-dbgsym' in '../libngs-c++3-dbgsym_3.0.9+dfsg-7_arm64.deb'.
dpkg-deb: building package 'libncbi-ngs3' in '../libncbi-ngs3_3.0.9+dfsg-7_arm64.deb'.
dpkg-deb: building package 'libngs-java-doc' in '../libngs-java-doc_3.0.9+dfsg-7_all.deb'.
dpkg-deb: building package 'libngs-java' in '../libngs-java_3.0.9+dfsg-7_arm64.deb'.
dpkg-deb: building package 'libngs-c++-dev' in '../libngs-c++-dev_3.0.9+dfsg-7_arm64.deb'.
dpkg-deb: building package 'libncbi-ngs-dev' in '../libncbi-ngs-dev_3.0.9+dfsg-7_arm64.deb'.
dpkg-deb: building package 'libngs-jni' in '../libngs-jni_3.0.9+dfsg-7_arm64.deb'.
dpkg-deb: building package 'libncbi-ngs3-dbgsym' in '../libncbi-ngs3-dbgsym_3.0.9+dfsg-7_arm64.deb'.
dpkg-deb: building package 'python3-ngs' in '../python3-ngs_3.0.9+dfsg-7_all.deb'.
 dpkg-genbuildinfo --build=binary -O../sra-sdk_3.0.9+dfsg-7_arm64.buildinfo
 dpkg-genchanges --build=binary -O../sra-sdk_3.0.9+dfsg-7_arm64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env 
I: removing directory /srv/workspace/pbuilder/970501 and its subdirectories
I: Current time: Fri Feb 13 04:53:34 -12 2026
I: pbuilder-time-stamp: 1771001614