I: pbuilder: network access will be disabled during build
I: Current time: Wed May 20 03:03:05 -12 2026
I: pbuilder-time-stamp: 1779289385
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [sra-sdk_3.2.1+dfsg-4.dsc]
I: copying [./sra-sdk_3.2.1+dfsg.orig.tar.xz]
I: copying [./sra-sdk_3.2.1+dfsg-4.debian.tar.xz]
I: Extracting source
dpkg-source: warning: cannot verify inline signature for ./sra-sdk_3.2.1+dfsg-4.dsc: unsupported subcommand
dpkg-source: info: extracting sra-sdk in sra-sdk-3.2.1+dfsg
dpkg-source: info: unpacking sra-sdk_3.2.1+dfsg.orig.tar.xz
dpkg-source: info: unpacking sra-sdk_3.2.1+dfsg-4.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying set_explicit_path_to_schemata.patch
dpkg-source: info: applying python3
dpkg-source: info: applying skip_test_using_lots_of_memory.patch
dpkg-source: info: applying find_ncbi-vdb-interfaces.patch
dpkg-source: info: applying link_vdb_dynamically.patch
dpkg-source: info: applying use_debian_packaged_re2.patch
dpkg-source: info: applying use_debian_packaged_compression_libs.patch
dpkg-source: info: applying use_soversions.patch
dpkg-source: info: applying label_online_tests.patch
dpkg-source: info: applying prefer_dynamic_libraries.patch
dpkg-source: info: applying fix_ngs-c++-underlinkage.patch
dpkg-source: info: applying use_c_locale_for_comma.patch
dpkg-source: info: applying no_sse4.2.patch
dpkg-source: info: applying fix_arm64_build.patch
dpkg-source: info: applying support_libre2-11.patch
dpkg-source: info: applying pyhon3.12-syntax.patch
dpkg-source: info: applying setuptools.patch
dpkg-source: info: applying fix_bm_for_gcc15.patch
dpkg-source: info: applying include_cstdint_for_gcc15.patch
dpkg-source: info: applying auto-gitignore
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/3233477/tmp/hooks/D02_print_environment starting
I: set
  BUILDDIR='/build/reproducible-path'
  BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
  BUILDUSERNAME='pbuilder1'
  BUILD_ARCH='arm64'
  DEBIAN_FRONTEND='noninteractive'
  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 '
  DISTRIBUTION='unstable'
  HOME='/root'
  HOST_ARCH='arm64'
  IFS=' 	
  '
  INVOCATION_ID='82c84049d5cb4b7a99c1910715602302'
  LANG='C'
  LANGUAGE='en_US:en'
  LC_ALL='C'
  MAIL='/var/mail/root'
  OPTIND='1'
  PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
  PBCURRENTCOMMANDLINEOPERATION='build'
  PBUILDER_OPERATION='build'
  PBUILDER_PKGDATADIR='/usr/share/pbuilder'
  PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
  PBUILDER_SYSCONFDIR='/etc'
  PPID='3233477'
  PS1='# '
  PS2='> '
  PS4='+ '
  PWD='/'
  SHELL='/bin/bash'
  SHLVL='2'
  SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.FDOGrFIV/pbuilderrc_5C9N --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.FDOGrFIV/b1 --logfile b1/build.log sra-sdk_3.2.1+dfsg-4.dsc'
  SUDO_GID='109'
  SUDO_UID='104'
  SUDO_USER='jenkins'
  TERM='unknown'
  TZ='/usr/share/zoneinfo/Etc/GMT+12'
  USER='root'
  _='/usr/bin/systemd-run'
  http_proxy='http://192.168.101.4:3128'
I: uname -a
  Linux codethink03-arm64 6.1.0-33-cloud-arm64 #1 SMP Debian 6.1.133-1 (2025-04-10) aarch64 GNU/Linux
I: ls -l /bin
  lrwxrwxrwx 1 root root 7 Mar  4  2025 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/3233477/tmp/hooks/D02_print_environment finished
 -> Attempting to satisfy build-dependencies
 -> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: arm64
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
 This package was created automatically by pbuilder to satisfy the
 build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), cmake, d-shlibs, dh-python, javahelper, libabsl-dev, libncbi-vdb-dev (>= 3.2.1+dfsg~), libhdf5-dev, libmagic-dev, libre2-dev, libxml2-dev, libzstd-dev, liblzma-dev, libsam-extract-dev, maven-repo-helper, python3-all, python3-setuptools, python3-vdb, default-jdk, flex, bison
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19954 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
 pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
  Package debhelper-compat is not installed.
 pbuilder-satisfydepends-dummy depends on cmake; however:
  Package cmake is not installed.
 pbuilder-satisfydepends-dummy depends on d-shlibs; however:
  Package d-shlibs is not installed.
 pbuilder-satisfydepends-dummy depends on dh-python; however:
  Package dh-python is not installed.
 pbuilder-satisfydepends-dummy depends on javahelper; however:
  Package javahelper is not installed.
 pbuilder-satisfydepends-dummy depends on libabsl-dev; however:
  Package libabsl-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libncbi-vdb-dev (>= 3.2.1+dfsg~); however:
  Package libncbi-vdb-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libhdf5-dev; however:
  Package libhdf5-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libmagic-dev; however:
  Package libmagic-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libre2-dev; however:
  Package libre2-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libxml2-dev; however:
  Package libxml2-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libzstd-dev; however:
  Package libzstd-dev is not installed.
 pbuilder-satisfydepends-dummy depends on liblzma-dev; however:
  Package liblzma-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libsam-extract-dev; however:
  Package libsam-extract-dev is not installed.
 pbuilder-satisfydepends-dummy depends on maven-repo-helper; however:
  Package maven-repo-helper is not installed.
 pbuilder-satisfydepends-dummy depends on python3-all; however:
  Package python3-all is not installed.
 pbuilder-satisfydepends-dummy depends on python3-setuptools; however:
  Package python3-setuptools is not installed.
 pbuilder-satisfydepends-dummy depends on python3-vdb; however:
  Package python3-vdb is not installed.
 pbuilder-satisfydepends-dummy depends on default-jdk; however:
  Package default-jdk is not installed.
 pbuilder-satisfydepends-dummy depends on flex; however:
  Package flex is not installed.
 pbuilder-satisfydepends-dummy depends on bison; however:
  Package bison is not installed.

Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
  adwaita-icon-theme{a} at-spi2-common{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} binfmt-support{a} bison{a} bsdextrautils{a} ca-certificates{a} ca-certificates-java{a} cmake{a} cmake-data{a} comerr-dev{a} d-shlibs{a} dbus{a} dbus-bin{a} dbus-daemon{a} dbus-session-bus-common{a} dbus-system-bus-common{a} dbus-user-session{a} dconf-gsettings-backend{a} dconf-service{a} dctrl-tools{a} debhelper{a} default-jdk{a} default-jdk-headless{a} default-jre{a} default-jre-headless{a} devscripts{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} fastjar{a} file{a} flex{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} gettext{a} gettext-base{a} gpg{a} gpg-agent{a} gpgconf{a} gpgv{a} groff-base{a} gtk-update-icon-cache{a} hdf5-helpers{a} hicolor-icon-theme{a} intltool-debian{a} jarwrapper{a} java-common{a} javahelper{a} krb5-multidev{a} libabsl-dev{a} libabsl20240722{a} libaec-dev{a} libaec0{a} libapparmor1{a} libarchive-zip-perl{a} libarchive13t64{a} libasound2-data{a} libasound2t64{a} libassuan9{a} libatk-bridge2.0-0t64{a} libatk1.0-0t64{a} libatspi2.0-0t64{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libb-hooks-op-check-perl{a} libbrotli-dev{a} libbrotli1{a} libbz2-dev{a} libcairo-gobject2{a} libcairo2{a} libclass-method-modifiers-perl{a} libclass-xsaccessor-perl{a} libclone-perl{a} libcloudproviders0{a} libcolord2{a} libcom-err2{a} libcups2t64{a} libcurl4-openssl-dev{a} libcurl4t64{a} libdatrie1{a} libdbus-1-3{a} libdconf1{a} libdebhelper-perl{a} libdeflate0{a} libdevel-callchecker-perl{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm2{a} libdynaloader-functions-perl{a} libedit2{a} libelf1t64{a} libencode-locale-perl{a} libepoxy0{a} libevent-2.1-7t64{a} libexpat1{a} libffi8{a} libfile-dirlist-perl{a} libfile-homedir-perl{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libfile-touch-perl{a} libfile-which-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgbm1{a} libgcrypt20{a} libgdk-pixbuf-2.0-0{a} libgdk-pixbuf2.0-common{a} libgfortran5{a} libgif7{a} libgl1{a} libgl1-mesa-dri{a} libglib2.0-0t64{a} libglvnd0{a} libglx-mesa0{a} libglx0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgnutls30t64{a} libgpg-error0{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgssrpc4t64{a} libgtk-3-0t64{a} libgtk-3-common{a} libharfbuzz0b{a} libhdf5-310{a} libhdf5-cpp-310{a} libhdf5-dev{a} libhdf5-fortran-310{a} libhdf5-hl-310{a} libhdf5-hl-cpp-310{a} libhdf5-hl-fortran-310{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libidn2-0{a} libidn2-dev{a} libimport-into-perl{a} libio-html-perl{a} libio-socket-ssl-perl{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjsoncpp26{a} libk5crypto3{a} libkadm5clnt-mit12{a} libkadm5srv-mit12{a} libkdb5-10t64{a} libkeyutils1{a} libkrb5-3{a} libkrb5-dev{a} libkrb5support0{a} libksba8{a} liblcms2-2{a} libldap-dev{a} libldap2{a} liblerc4{a} libllvm19{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} liblzma-dev{a} libmagic-dev{a} libmagic-mgc{a} libmagic1t64{a} libmbedcrypto16{a} libmbedtls-dev{a} libmbedtls21{a} libmbedx509-7{a} libmodule-runtime-perl{a} libmoo-perl{a} libncbi-vdb-dev{a} libncbi-vdb3{a} libncbi-wvdb-dev{a} libncbi-wvdb3{a} libnet-http-perl{a} libnet-ssleay-perl{a} libnghttp2-14{a} libnghttp2-dev{a} libnghttp3-9{a} libnghttp3-dev{a} libnpth0t64{a} libnspr4{a} libnss3{a} libp11-kit-dev{a} libp11-kit0{a} libpam-systemd{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libparams-classify-perl{a} libpcsclite1{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng16-16t64{a} libproc2-0{a} libpsl-dev{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libre2-11{a} libre2-dev{a} libreadline8t64{a} librhash1{a} librole-tiny-perl{a} librtmp-dev{a} librtmp1{a} libsam-extract-dev{a} libsam-extract3{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsharpyuv0{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libsub-quote-perl{a} libsystemd-shared{a} libsz2{a} libtasn1-6{a} libtasn1-6-dev{a} libthai-data{a} libthai0{a} libtiff6{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} libunbound8{a} libunistring5{a} liburi-perl{a} libuv1t64{a} libvulkan1{a} libwayland-client0{a} libwayland-cursor0{a} libwayland-egl1{a} libwayland-server0{a} libwebp7{a} libwww-perl{a} libwww-robotrules-perl{a} libx11-6{a} libx11-data{a} libx11-xcb1{a} libxau6{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-xfixes0{a} libxcb1{a} libxcomposite1{a} libxcursor1{a} libxdamage1{a} libxdmcp6{a} libxext6{a} libxfixes3{a} libxi6{a} libxinerama1{a} libxkbcommon0{a} libxml2{a} libxml2-dev{a} libxrandr2{a} libxrender1{a} libxshmfence1{a} libxtst6{a} libxxf86vm1{a} libz3-4{a} libzstd-dev{a} m4{a} man-db{a} maven-repo-helper{a} media-types{a} mesa-libgallium{a} ncbi-vdb-data{a} netbase{a} nettle-dev{a} openjdk-21-jdk{a} openjdk-21-jdk-headless{a} openjdk-21-jre{a} openjdk-21-jre-headless{a} openssl{a} patchutils{a} perl-openssl-defaults{a} pinentry-curses{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} python3{a} python3-all{a} python3-autocommand{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-pkg-resources{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} shared-mime-info{a} sopv-gpgv{a} systemd{a} systemd-sysv{a} tzdata{a} wdiff{a} x11-common{a} xkb-data{a} zlib1g-dev{a} 
The following packages are RECOMMENDED but will NOT be installed:
  alsa-topology-conf alsa-ucm-conf at-spi2-core bzip2-doc chrony curl debian-keyring dput dput-ng dupload equivs fonts-dejavu-extra gnupg krb5-locales libarchive-cpio-perl libatk-wrapper-java-jni libdata-dump-perl libdistro-info-perl libfl-dev libgdk-pixbuf2.0-bin libgit-wrapper-perl libgitlab-api-v4-perl libglib2.0-data libgmock-dev libgpg-error-l10n libgtk-3-bin libhtml-form-perl libhtml-format-perl libhttp-daemon-perl libio-compress-brotli-perl libjson-perl libkmod2 libldap-common liblist-compare-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libnamespace-clean-perl libnss-systemd librsvg2-common libsasl2-modules libsoap-lite-perl libstring-shellquote-perl libtasn1-doc libxstring-perl libxt-dev licensecheck lintian linux-sysctl-defaults lynx lzip mesa-vulkan-drivers ntpsec openntpd pristine-tar psmisc publicsuffix python3-apt python3-argcomplete python3-debian python3-magic python3-requests python3-unidiff python3-xdg sopv-doc strace systemd-cryptsetup systemd-timesyncd unzip wget xdg-user-dirs 
0 packages upgraded, 338 newly installed, 0 to remove and 0 not upgraded.
Need to get 269 MB of archives. After unpacking 930 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian unstable/main arm64 libsystemd-shared arm64 257.5-2 [1911 kB]
Get: 2 http://deb.debian.org/debian unstable/main arm64 libapparmor1 arm64 4.1.0-1 [42.9 kB]
Get: 3 http://deb.debian.org/debian unstable/main arm64 systemd arm64 257.5-2 [2920 kB]
Get: 4 http://deb.debian.org/debian unstable/main arm64 systemd-sysv arm64 257.5-2 [63.9 kB]
Get: 5 http://deb.debian.org/debian unstable/main arm64 libdbus-1-3 arm64 1.16.2-2 [169 kB]
Get: 6 http://deb.debian.org/debian unstable/main arm64 dbus-bin arm64 1.16.2-2 [78.8 kB]
Get: 7 http://deb.debian.org/debian unstable/main arm64 dbus-session-bus-common all 1.16.2-2 [52.3 kB]
Get: 8 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.7.1-1 [93.3 kB]
Get: 9 http://deb.debian.org/debian unstable/main arm64 dbus-daemon arm64 1.16.2-2 [152 kB]
Get: 10 http://deb.debian.org/debian unstable/main arm64 dbus-system-bus-common all 1.16.2-2 [53.5 kB]
Get: 11 http://deb.debian.org/debian unstable/main arm64 dbus arm64 1.16.2-2 [70.7 kB]
Get: 12 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB]
Get: 13 http://deb.debian.org/debian unstable/main arm64 binfmt-support arm64 2.2.2-7+b1 [68.2 kB]
Get: 14 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-7 [285 kB]
Get: 15 http://deb.debian.org/debian unstable/main arm64 flex arm64 2.6.4-8.2+b4 [412 kB]
Get: 16 http://deb.debian.org/debian unstable/main arm64 libpython3.13-minimal arm64 3.13.3-2 [855 kB]
Get: 17 http://deb.debian.org/debian unstable/main arm64 python3.13-minimal arm64 3.13.3-2 [1998 kB]
Get: 18 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.13.3-1 [27.2 kB]
Get: 19 http://deb.debian.org/debian unstable/main arm64 media-types all 13.0.0 [29.3 kB]
Get: 20 http://deb.debian.org/debian unstable/main arm64 netbase all 6.5 [12.4 kB]
Get: 21 http://deb.debian.org/debian unstable/main arm64 tzdata all 2025b-2 [260 kB]
Get: 22 http://deb.debian.org/debian unstable/main arm64 libffi8 arm64 3.4.7-1 [21.2 kB]
Get: 23 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.2-6 [69.4 kB]
Get: 24 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.2-6 [159 kB]
Get: 25 http://deb.debian.org/debian unstable/main arm64 libpython3.13-stdlib arm64 3.13.3-2 [1890 kB]
Get: 26 http://deb.debian.org/debian unstable/main arm64 python3.13 arm64 3.13.3-2 [751 kB]
Get: 27 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.13.3-1 [10.2 kB]
Get: 28 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.13.3-1 [28.2 kB]
Get: 29 http://deb.debian.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-8 [63.0 kB]
Get: 30 http://deb.debian.org/debian unstable/main arm64 procps arm64 2:4.0.4-8 [873 kB]
Get: 31 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.24 [24.8 kB]
Get: 32 http://deb.debian.org/debian unstable/main arm64 openssl arm64 3.5.0-1 [1454 kB]
Get: 33 http://deb.debian.org/debian unstable/main arm64 ca-certificates all 20241223 [164 kB]
Get: 34 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB]
Get: 35 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB]
Get: 36 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.46-5 [43.7 kB]
Get: 37 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.23.1-1 [241 kB]
Get: 38 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB]
Get: 39 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-7 [1129 kB]
Get: 40 http://deb.debian.org/debian unstable/main arm64 libpam-systemd arm64 257.5-2 [275 kB]
Get: 41 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.41-4 [93.9 kB]
Get: 42 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.0-1 [1404 kB]
Get: 43 http://deb.debian.org/debian unstable/main arm64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-2 [311 kB]
Get: 44 http://deb.debian.org/debian unstable/main arm64 libglib2.0-0t64 arm64 2.84.1-1 [1423 kB]
Get: 45 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.4 [629 kB]
Get: 46 http://deb.debian.org/debian unstable/main arm64 shared-mime-info arm64 2.4-5+b2 [756 kB]
Get: 47 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo arm64 1:2.1.5-3.1 [173 kB]
Get: 48 http://deb.debian.org/debian unstable/main arm64 libpng16-16t64 arm64 1.6.47-1.1 [274 kB]
Get: 49 http://deb.debian.org/debian unstable/main arm64 libdeflate0 arm64 1.23-2 [42.4 kB]
Get: 50 http://deb.debian.org/debian unstable/main arm64 libjbig0 arm64 2.1-6.1+b2 [30.4 kB]
Get: 51 http://deb.debian.org/debian unstable/main arm64 liblerc4 arm64 4.0.0+ds-5 [146 kB]
Get: 52 http://deb.debian.org/debian unstable/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [114 kB]
Get: 53 http://deb.debian.org/debian unstable/main arm64 libwebp7 arm64 1.5.0-0.1 [271 kB]
Get: 54 http://deb.debian.org/debian unstable/main arm64 libtiff6 arm64 4.7.0-3 [325 kB]
Get: 55 http://deb.debian.org/debian unstable/main arm64 libgdk-pixbuf-2.0-0 arm64 2.42.12+dfsg-2 [131 kB]
Get: 56 http://deb.debian.org/debian unstable/main arm64 gtk-update-icon-cache arm64 4.18.4+ds-1 [51.2 kB]
Get: 57 http://deb.debian.org/debian unstable/main arm64 hicolor-icon-theme all 0.18-2 [11.8 kB]
Get: 58 http://deb.debian.org/debian unstable/main arm64 adwaita-icon-theme all 48.0-1 [504 kB]
Get: 59 http://deb.debian.org/debian unstable/main arm64 at-spi2-common all 2.56.1-2 [171 kB]
Get: 60 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3.1 [494 kB]
Get: 61 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20240727.1 [60.2 kB]
Get: 62 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.17-4 [862 kB]
Get: 63 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.23.1-1 [770 kB]
Get: 64 http://deb.debian.org/debian unstable/main arm64 bison arm64 2:3.8.2+dfsg-1+b2 [1149 kB]
Get: 65 http://deb.debian.org/debian unstable/main arm64 ca-certificates-java all 20240118 [11.6 kB]
Get: 66 http://deb.debian.org/debian unstable/main arm64 cmake-data all 3.31.6-2 [2268 kB]
Get: 67 http://deb.debian.org/debian unstable/main arm64 libarchive13t64 arm64 3.7.4-1.1 [323 kB]
Get: 68 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b7 [308 kB]
Get: 69 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.21.3-5 [32.4 kB]
Get: 70 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.2-1+b1 [24.2 kB]
Get: 71 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.21.3-5 [81.2 kB]
Get: 72 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-6 [9716 B]
Get: 73 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.21.3-5 [308 kB]
Get: 74 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.21.3-5 [127 kB]
Get: 75 http://deb.debian.org/debian unstable/main arm64 libunistring5 arm64 1.3-2 [453 kB]
Get: 76 http://deb.debian.org/debian unstable/main arm64 libidn2-0 arm64 2.3.8-2 [107 kB]
Get: 77 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-9 [20.1 kB]
Get: 78 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-9 [55.6 kB]
Get: 79 http://deb.debian.org/debian unstable/main arm64 libldap2 arm64 2.6.9+dfsg-2 [179 kB]
Get: 80 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1.1 [71.4 kB]
Get: 81 http://deb.debian.org/debian unstable/main arm64 libnghttp3-9 arm64 1.8.0-1 [63.2 kB]
Get: 82 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB]
Get: 83 http://deb.debian.org/debian unstable/main arm64 libp11-kit0 arm64 0.25.5-3 [409 kB]
Get: 84 http://deb.debian.org/debian unstable/main arm64 libtasn1-6 arm64 4.20.0-2 [47.3 kB]
Get: 85 http://deb.debian.org/debian unstable/main arm64 libgnutls30t64 arm64 3.8.9-2 [1374 kB]
Get: 86 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b5 [56.8 kB]
Get: 87 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB]
Get: 88 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.13.0-2 [347 kB]
Get: 89 http://deb.debian.org/debian unstable/main arm64 libjsoncpp26 arm64 1.9.6-3 [72.9 kB]
Get: 90 http://deb.debian.org/debian unstable/main arm64 librhash1 arm64 1.4.5-1 [129 kB]
Get: 91 http://deb.debian.org/debian unstable/main arm64 libuv1t64 arm64 1.50.0-2 [148 kB]
Get: 92 http://deb.debian.org/debian unstable/main arm64 cmake arm64 3.31.6-2 [9906 kB]
Get: 93 http://deb.debian.org/debian unstable/main arm64 comerr-dev arm64 2.1-1.47.2-1+b1 [56.2 kB]
Get: 94 http://deb.debian.org/debian unstable/main arm64 d-shlibs all 0.109 [11.1 kB]
Get: 95 http://deb.debian.org/debian unstable/main arm64 dbus-user-session arm64 1.16.2-2 [52.1 kB]
Get: 96 http://deb.debian.org/debian unstable/main arm64 libdconf1 arm64 0.40.0-5 [40.4 kB]
Get: 97 http://deb.debian.org/debian unstable/main arm64 dconf-service arm64 0.40.0-5 [30.9 kB]
Get: 98 http://deb.debian.org/debian unstable/main arm64 dconf-gsettings-backend arm64 0.40.0-5 [27.3 kB]
Get: 99 http://deb.debian.org/debian unstable/main arm64 dctrl-tools arm64 2.24-3+b1 [125 kB]
Get: 100 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.24.2 [90.9 kB]
Get: 101 http://deb.debian.org/debian unstable/main arm64 libtool all 2.5.4-4 [539 kB]
Get: 102 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB]
Get: 103 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 104 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB]
Get: 105 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.1-2 [8620 B]
Get: 106 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB]
Get: 107 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB]
Get: 108 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.23.1-1 [1610 kB]
Get: 109 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 110 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 111 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.24.2 [919 kB]
Get: 112 http://deb.debian.org/debian unstable/main arm64 java-common all 0.76 [6776 B]
Get: 113 http://deb.debian.org/debian unstable/main arm64 liblcms2-2 arm64 2.16-2 [151 kB]
Get: 114 http://deb.debian.org/debian unstable/main arm64 libnspr4 arm64 2:4.36-1 [102 kB]
Get: 115 http://deb.debian.org/debian unstable/main arm64 libnss3 arm64 2:3.110-1 [1292 kB]
Get: 116 http://deb.debian.org/debian unstable/main arm64 libpcsclite1 arm64 2.3.3-1 [55.0 kB]
Get: 117 http://deb.debian.org/debian unstable/main arm64 openjdk-21-jre-headless arm64 21.0.7~8ea-1 [40.6 MB]
Get: 118 http://deb.debian.org/debian unstable/main arm64 default-jre-headless arm64 2:1.21-76 [3192 B]
Get: 119 http://deb.debian.org/debian unstable/main arm64 libatk1.0-0t64 arm64 2.56.1-2 [50.0 kB]
Get: 120 http://deb.debian.org/debian unstable/main arm64 libxau6 arm64 1:1.0.11-1 [20.6 kB]
Get: 121 http://deb.debian.org/debian unstable/main arm64 libxdmcp6 arm64 1:1.1.5-1 [27.8 kB]
Get: 122 http://deb.debian.org/debian unstable/main arm64 libxcb1 arm64 1.17.0-2+b1 [143 kB]
Get: 123 http://deb.debian.org/debian unstable/main arm64 libx11-data all 2:1.8.12-1 [343 kB]
Get: 124 http://deb.debian.org/debian unstable/main arm64 libx11-6 arm64 2:1.8.12-1 [795 kB]
Get: 125 http://deb.debian.org/debian unstable/main arm64 libxext6 arm64 2:1.3.4-1+b3 [49.2 kB]
Get: 126 http://deb.debian.org/debian unstable/main arm64 libxi6 arm64 2:1.8.2-1 [77.8 kB]
Get: 127 http://deb.debian.org/debian unstable/main arm64 libatspi2.0-0t64 arm64 2.56.1-2 [76.5 kB]
Get: 128 http://deb.debian.org/debian unstable/main arm64 libatk-bridge2.0-0t64 arm64 2.56.1-2 [64.8 kB]
Get: 129 http://deb.debian.org/debian unstable/main arm64 libfreetype6 arm64 2.13.3+dfsg-1 [422 kB]
Get: 130 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-mono all 2.37-8 [489 kB]
Get: 131 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-core all 2.37-8 [840 kB]
Get: 132 http://deb.debian.org/debian unstable/main arm64 fontconfig-config arm64 2.15.0-2.3 [318 kB]
Get: 133 http://deb.debian.org/debian unstable/main arm64 libfontconfig1 arm64 2.15.0-2.3 [387 kB]
Get: 134 http://deb.debian.org/debian unstable/main arm64 libpixman-1-0 arm64 0.44.0-3 [168 kB]
Get: 135 http://deb.debian.org/debian unstable/main arm64 libxcb-render0 arm64 1.17.0-2+b1 [115 kB]
Get: 136 http://deb.debian.org/debian unstable/main arm64 libxcb-shm0 arm64 1.17.0-2+b1 [105 kB]
Get: 137 http://deb.debian.org/debian unstable/main arm64 libxrender1 arm64 1:0.9.12-1 [27.0 kB]
Get: 138 http://deb.debian.org/debian unstable/main arm64 libcairo2 arm64 1.18.4-1+b1 [483 kB]
Get: 139 http://deb.debian.org/debian unstable/main arm64 libcairo-gobject2 arm64 1.18.4-1+b1 [130 kB]
Get: 140 http://deb.debian.org/debian unstable/main arm64 libcloudproviders0 arm64 0.3.6-2 [27.4 kB]
Get: 141 http://deb.debian.org/debian unstable/main arm64 libcolord2 arm64 1.4.7-3 [130 kB]
Get: 142 http://deb.debian.org/debian unstable/main arm64 libavahi-common-data arm64 0.8-16 [112 kB]
Get: 143 http://deb.debian.org/debian unstable/main arm64 libavahi-common3 arm64 0.8-16 [43.3 kB]
Get: 144 http://deb.debian.org/debian unstable/main arm64 libavahi-client3 arm64 0.8-16 [46.7 kB]
Get: 145 http://deb.debian.org/debian unstable/main arm64 libcups2t64 arm64 2.4.10-2+b1 [236 kB]
Get: 146 http://deb.debian.org/debian unstable/main arm64 libepoxy0 arm64 1.5.10-2 [200 kB]
Get: 147 http://deb.debian.org/debian unstable/main arm64 libfribidi0 arm64 1.0.16-1 [26.5 kB]
Get: 148 http://deb.debian.org/debian unstable/main arm64 libgraphite2-3 arm64 1.3.14-2+b1 [70.4 kB]
Get: 149 http://deb.debian.org/debian unstable/main arm64 libharfbuzz0b arm64 10.2.0-1+b1 [442 kB]
Get: 150 http://deb.debian.org/debian unstable/main arm64 fontconfig arm64 2.15.0-2.3 [463 kB]
Get: 151 http://deb.debian.org/debian unstable/main arm64 libthai-data all 0.1.29-2 [168 kB]
Get: 152 http://deb.debian.org/debian unstable/main arm64 libdatrie1 arm64 0.2.13-3+b1 [37.6 kB]
Get: 153 http://deb.debian.org/debian unstable/main arm64 libthai0 arm64 0.1.29-2+b1 [48.4 kB]
Get: 154 http://deb.debian.org/debian unstable/main arm64 libpango-1.0-0 arm64 1.56.3-1 [213 kB]
Get: 155 http://deb.debian.org/debian unstable/main arm64 libpangoft2-1.0-0 arm64 1.56.3-1 [52.9 kB]
Get: 156 http://deb.debian.org/debian unstable/main arm64 libpangocairo-1.0-0 arm64 1.56.3-1 [33.7 kB]
Get: 157 http://deb.debian.org/debian unstable/main arm64 libwayland-client0 arm64 1.23.1-3 [26.1 kB]
Get: 158 http://deb.debian.org/debian unstable/main arm64 libwayland-cursor0 arm64 1.23.1-3 [11.7 kB]
Get: 159 http://deb.debian.org/debian unstable/main arm64 libwayland-egl1 arm64 1.23.1-3 [5952 B]
Get: 160 http://deb.debian.org/debian unstable/main arm64 libxcomposite1 arm64 1:0.4.6-1 [16.4 kB]
Get: 161 http://deb.debian.org/debian unstable/main arm64 libxfixes3 arm64 1:6.0.0-2+b4 [20.5 kB]
Get: 162 http://deb.debian.org/debian unstable/main arm64 libxcursor1 arm64 1:1.2.3-1 [39.3 kB]
Get: 163 http://deb.debian.org/debian unstable/main arm64 libxdamage1 arm64 1:1.1.6-1+b2 [15.6 kB]
Get: 164 http://deb.debian.org/debian unstable/main arm64 libxinerama1 arm64 2:1.1.4-3+b4 [16.0 kB]
Get: 165 http://deb.debian.org/debian unstable/main arm64 xkb-data all 2.42-1 [790 kB]
Get: 166 http://deb.debian.org/debian unstable/main arm64 libxkbcommon0 arm64 1.7.0-2 [106 kB]
Get: 167 http://deb.debian.org/debian unstable/main arm64 libxrandr2 arm64 2:1.5.4-1+b3 [35.9 kB]
Get: 168 http://deb.debian.org/debian unstable/main arm64 libgtk-3-common all 3.24.49-3 [4908 kB]
Get: 169 http://deb.debian.org/debian unstable/main arm64 libgtk-3-0t64 arm64 3.24.49-3 [2565 kB]
Get: 170 http://deb.debian.org/debian unstable/main arm64 libglvnd0 arm64 1.7.0-1+b2 [41.6 kB]
Get: 171 http://deb.debian.org/debian unstable/main arm64 libdrm-common all 2.4.124-2 [8288 B]
Get: 172 http://deb.debian.org/debian unstable/main arm64 libdrm2 arm64 2.4.124-2 [38.3 kB]
Get: 173 http://deb.debian.org/debian unstable/main arm64 libx11-xcb1 arm64 2:1.8.12-1 [247 kB]
Get: 174 http://deb.debian.org/debian unstable/main arm64 libxcb-dri3-0 arm64 1.17.0-2+b1 [107 kB]
Get: 175 http://deb.debian.org/debian unstable/main arm64 libxcb-glx0 arm64 1.17.0-2+b1 [123 kB]
Get: 176 http://deb.debian.org/debian unstable/main arm64 libxcb-present0 arm64 1.17.0-2+b1 [106 kB]
Get: 177 http://deb.debian.org/debian unstable/main arm64 libxcb-xfixes0 arm64 1.17.0-2+b1 [110 kB]
Get: 178 http://deb.debian.org/debian unstable/main arm64 libxxf86vm1 arm64 1:1.1.4-1+b4 [19.2 kB]
Get: 179 http://deb.debian.org/debian unstable/main arm64 libdrm-amdgpu1 arm64 2.4.124-2 [21.8 kB]
Get: 180 http://deb.debian.org/debian unstable/main arm64 libedit2 arm64 3.1-20250104-1 [89.3 kB]
Get: 181 http://deb.debian.org/debian unstable/main arm64 libz3-4 arm64 4.13.3-1 [7507 kB]
Get: 182 http://deb.debian.org/debian unstable/main arm64 libllvm19 arm64 1:19.1.7-3 [23.3 MB]
Get: 183 http://deb.debian.org/debian unstable/main arm64 libsensors-config all 1:3.6.2-2 [16.2 kB]
Get: 184 http://deb.debian.org/debian unstable/main arm64 libsensors5 arm64 1:3.6.2-2 [36.4 kB]
Get: 185 http://deb.debian.org/debian unstable/main arm64 libxcb-randr0 arm64 1.17.0-2+b1 [117 kB]
Get: 186 http://deb.debian.org/debian unstable/main arm64 libxcb-sync1 arm64 1.17.0-2+b1 [109 kB]
Get: 187 http://deb.debian.org/debian unstable/main arm64 libxshmfence1 arm64 1.3.3-1 [11.1 kB]
Get: 188 http://deb.debian.org/debian unstable/main arm64 mesa-libgallium arm64 25.0.3-1 [8027 kB]
Get: 189 http://deb.debian.org/debian unstable/main arm64 libwayland-server0 arm64 1.23.1-3 [33.7 kB]
Get: 190 http://deb.debian.org/debian unstable/main arm64 libgbm1 arm64 25.0.3-1 [43.5 kB]
Get: 191 http://deb.debian.org/debian unstable/main arm64 libvulkan1 arm64 1.4.309.0-1 [127 kB]
Get: 192 http://deb.debian.org/debian unstable/main arm64 libgl1-mesa-dri arm64 25.0.3-1 [45.3 kB]
Get: 193 http://deb.debian.org/debian unstable/main arm64 libglx-mesa0 arm64 25.0.3-1 [142 kB]
Get: 194 http://deb.debian.org/debian unstable/main arm64 libglx0 arm64 1.7.0-1+b2 [31.1 kB]
Get: 195 http://deb.debian.org/debian unstable/main arm64 libgl1 arm64 1.7.0-1+b2 [90.9 kB]
Get: 196 http://deb.debian.org/debian unstable/main arm64 libasound2-data all 1.2.14-1 [21.1 kB]
Get: 197 http://deb.debian.org/debian unstable/main arm64 libasound2t64 arm64 1.2.14-1 [342 kB]
Get: 198 http://deb.debian.org/debian unstable/main arm64 libgif7 arm64 5.2.2-1+b1 [44.2 kB]
Get: 199 http://deb.debian.org/debian unstable/main arm64 x11-common all 1:7.7+24 [217 kB]
Get: 200 http://deb.debian.org/debian unstable/main arm64 libxtst6 arm64 2:1.2.5-1 [25.7 kB]
Get: 201 http://deb.debian.org/debian unstable/main arm64 openjdk-21-jre arm64 21.0.7~8ea-1 [193 kB]
Get: 202 http://deb.debian.org/debian unstable/main arm64 default-jre arm64 2:1.21-76 [1068 B]
Get: 203 http://deb.debian.org/debian unstable/main arm64 openjdk-21-jdk-headless arm64 21.0.7~8ea-1 [81.9 MB]
Get: 204 http://deb.debian.org/debian unstable/main arm64 default-jdk-headless arm64 2:1.21-76 [1124 B]
Get: 205 http://deb.debian.org/debian unstable/main arm64 openjdk-21-jdk arm64 21.0.7~8ea-1 [3549 kB]
Get: 206 http://deb.debian.org/debian unstable/main arm64 default-jdk arm64 2:1.21-76 [1076 B]
Get: 207 http://deb.debian.org/debian unstable/main arm64 libgpg-error0 arm64 1.51-4 [78.5 kB]
Get: 208 http://deb.debian.org/debian unstable/main arm64 libassuan9 arm64 3.0.2-2 [59.1 kB]
Get: 209 http://deb.debian.org/debian unstable/main arm64 libgcrypt20 arm64 1.11.0-7 [742 kB]
Get: 210 http://deb.debian.org/debian unstable/main arm64 gpgconf arm64 2.4.7-15 [121 kB]
Get: 211 http://deb.debian.org/debian unstable/main arm64 libksba8 arm64 1.6.7-2+b1 [125 kB]
Get: 212 http://deb.debian.org/debian unstable/main arm64 libnpth0t64 arm64 1.8-3 [22.9 kB]
Get: 213 http://deb.debian.org/debian unstable/main arm64 gpg arm64 2.4.7-15 [577 kB]
Get: 214 http://deb.debian.org/debian unstable/main arm64 pinentry-curses arm64 1.3.1-2 [83.5 kB]
Get: 215 http://deb.debian.org/debian unstable/main arm64 gpg-agent arm64 2.4.7-15 [248 kB]
Get: 216 http://deb.debian.org/debian unstable/main arm64 gpgv arm64 2.4.7-15 [219 kB]
Get: 217 http://deb.debian.org/debian unstable/main arm64 sopv-gpgv all 0.1.4-1 [11.3 kB]
Get: 218 http://deb.debian.org/debian unstable/main arm64 libfile-dirlist-perl all 0.05-3 [7600 B]
Get: 219 http://deb.debian.org/debian unstable/main arm64 libfile-which-perl all 1.27-2 [15.1 kB]
Get: 220 http://deb.debian.org/debian unstable/main arm64 libfile-homedir-perl all 1.006-2 [42.4 kB]
Get: 221 http://deb.debian.org/debian unstable/main arm64 libfile-touch-perl all 0.12-2 [8816 B]
Get: 222 http://deb.debian.org/debian unstable/main arm64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB]
Get: 223 http://deb.debian.org/debian unstable/main arm64 libclass-xsaccessor-perl arm64 1.19-4+b5 [34.9 kB]
Get: 224 http://deb.debian.org/debian unstable/main arm64 libb-hooks-op-check-perl arm64 0.22-3+b2 [10.6 kB]
Get: 225 http://deb.debian.org/debian unstable/main arm64 libdynaloader-functions-perl all 0.004-2 [12.2 kB]
Get: 226 http://deb.debian.org/debian unstable/main arm64 libdevel-callchecker-perl arm64 0.009-2 [15.7 kB]
Get: 227 http://deb.debian.org/debian unstable/main arm64 libparams-classify-perl arm64 0.015-2+b4 [22.3 kB]
Get: 228 http://deb.debian.org/debian unstable/main arm64 libmodule-runtime-perl all 0.017-1 [17.9 kB]
Get: 229 http://deb.debian.org/debian unstable/main arm64 libimport-into-perl all 1.002005-2 [11.3 kB]
Get: 230 http://deb.debian.org/debian unstable/main arm64 librole-tiny-perl all 2.002004-1 [21.4 kB]
Get: 231 http://deb.debian.org/debian unstable/main arm64 libsub-quote-perl all 2.006008-1 [21.8 kB]
Get: 232 http://deb.debian.org/debian unstable/main arm64 libmoo-perl all 2.005005-1 [58.0 kB]
Get: 233 http://deb.debian.org/debian unstable/main arm64 libencode-locale-perl all 1.05-3 [12.9 kB]
Get: 234 http://deb.debian.org/debian unstable/main arm64 libtimedate-perl all 2.3300-2 [39.3 kB]
Get: 235 http://deb.debian.org/debian unstable/main arm64 libhttp-date-perl all 6.06-1 [10.7 kB]
Get: 236 http://deb.debian.org/debian unstable/main arm64 libfile-listing-perl all 6.16-1 [12.4 kB]
Get: 237 http://deb.debian.org/debian unstable/main arm64 libhtml-tagset-perl all 3.24-1 [14.7 kB]
Get: 238 http://deb.debian.org/debian unstable/main arm64 liburi-perl all 5.30-1 [105 kB]
Get: 239 http://deb.debian.org/debian unstable/main arm64 libhtml-parser-perl arm64 3.83-1+b2 [97.5 kB]
Get: 240 http://deb.debian.org/debian unstable/main arm64 libhtml-tree-perl all 5.07-3 [211 kB]
Get: 241 http://deb.debian.org/debian unstable/main arm64 libclone-perl arm64 0.47-1+b1 [13.7 kB]
Get: 242 http://deb.debian.org/debian unstable/main arm64 libio-html-perl all 1.004-3 [16.2 kB]
Get: 243 http://deb.debian.org/debian unstable/main arm64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB]
Get: 244 http://deb.debian.org/debian unstable/main arm64 libhttp-message-perl all 7.00-2 [79.8 kB]
Get: 245 http://deb.debian.org/debian unstable/main arm64 libhttp-cookies-perl all 6.11-1 [19.1 kB]
Get: 246 http://deb.debian.org/debian unstable/main arm64 libhttp-negotiate-perl all 6.01-2 [13.1 kB]
Get: 247 http://deb.debian.org/debian unstable/main arm64 perl-openssl-defaults arm64 7+b2 [6712 B]
Get: 248 http://deb.debian.org/debian unstable/main arm64 libnet-ssleay-perl arm64 1.94-3 [323 kB]
Get: 249 http://deb.debian.org/debian unstable/main arm64 libio-socket-ssl-perl all 2.089-1 [223 kB]
Get: 250 http://deb.debian.org/debian unstable/main arm64 libnet-http-perl all 6.23-1 [23.9 kB]
Get: 251 http://deb.debian.org/debian unstable/main arm64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB]
Get: 252 http://deb.debian.org/debian unstable/main arm64 libtry-tiny-perl all 0.32-1 [22.9 kB]
Get: 253 http://deb.debian.org/debian unstable/main arm64 libwww-robotrules-perl all 6.02-1 [12.9 kB]
Get: 254 http://deb.debian.org/debian unstable/main arm64 libwww-perl all 6.78-1 [183 kB]
Get: 255 http://deb.debian.org/debian unstable/main arm64 patchutils arm64 0.4.2-1+b1 [71.3 kB]
Get: 256 http://deb.debian.org/debian unstable/main arm64 wdiff arm64 1.2.2-8 [122 kB]
Get: 257 http://deb.debian.org/debian unstable/main arm64 devscripts all 2.25.9 [1057 kB]
Get: 258 http://deb.debian.org/debian unstable/main arm64 dh-python all 6.20250414 [116 kB]
Get: 259 http://deb.debian.org/debian unstable/main arm64 fastjar arm64 2:0.98-7+b1 [74.9 kB]
Get: 260 http://deb.debian.org/debian unstable/main arm64 hdf5-helpers arm64 1.14.5+repack-3 [26.6 kB]
Get: 261 http://deb.debian.org/debian unstable/main arm64 jarwrapper all 0.80 [9692 B]
Get: 262 http://deb.debian.org/debian unstable/main arm64 javahelper all 0.80 [80.4 kB]
Get: 263 http://deb.debian.org/debian unstable/main arm64 libgssrpc4t64 arm64 1.21.3-5 [57.2 kB]
Get: 264 http://deb.debian.org/debian unstable/main arm64 libkadm5clnt-mit12 arm64 1.21.3-5 [41.1 kB]
Get: 265 http://deb.debian.org/debian unstable/main arm64 libkdb5-10t64 arm64 1.21.3-5 [41.3 kB]
Get: 266 http://deb.debian.org/debian unstable/main arm64 libkadm5srv-mit12 arm64 1.21.3-5 [53.0 kB]
Get: 267 http://deb.debian.org/debian unstable/main arm64 krb5-multidev arm64 1.21.3-5 [126 kB]
Get: 268 http://deb.debian.org/debian unstable/main arm64 libabsl20240722 arm64 20240722.0-3 [453 kB]
Get: 269 http://deb.debian.org/debian unstable/main arm64 libabsl-dev arm64 20240722.0-3 [1223 kB]
Get: 270 http://deb.debian.org/debian unstable/main arm64 libaec0 arm64 1.1.3-1+b1 [22.5 kB]
Get: 271 http://deb.debian.org/debian unstable/main arm64 libsz2 arm64 1.1.3-1+b1 [8044 B]
Get: 272 http://deb.debian.org/debian unstable/main arm64 libaec-dev arm64 1.1.3-1+b1 [20.2 kB]
Get: 273 http://deb.debian.org/debian unstable/main arm64 libbrotli-dev arm64 1.1.0-2+b7 [308 kB]
Get: 274 http://deb.debian.org/debian unstable/main arm64 libbz2-dev arm64 1.0.8-6 [31.9 kB]
Get: 275 http://deb.debian.org/debian unstable/main arm64 libidn2-dev arm64 2.3.8-2 [101 kB]
Get: 276 http://deb.debian.org/debian unstable/main arm64 libkrb5-dev arm64 1.21.3-5 [16.1 kB]
Get: 277 http://deb.debian.org/debian unstable/main arm64 libldap-dev arm64 2.6.9+dfsg-2 [305 kB]
Get: 278 http://deb.debian.org/debian unstable/main arm64 libpkgconf3 arm64 1.8.1-4 [35.3 kB]
Get: 279 http://deb.debian.org/debian unstable/main arm64 pkgconf-bin arm64 1.8.1-4 [29.6 kB]
Get: 280 http://deb.debian.org/debian unstable/main arm64 pkgconf arm64 1.8.1-4 [26.1 kB]
Get: 281 http://deb.debian.org/debian unstable/main arm64 libnghttp2-dev arm64 1.64.0-1.1 [112 kB]
Get: 282 http://deb.debian.org/debian unstable/main arm64 libnghttp3-dev arm64 1.8.0-1 [89.4 kB]
Get: 283 http://deb.debian.org/debian unstable/main arm64 libpsl-dev arm64 0.21.2-1.1+b1 [77.9 kB]
Get: 284 http://deb.debian.org/debian unstable/main arm64 libgmpxx4ldbl arm64 2:6.3.0+dfsg-3 [329 kB]
Get: 285 http://deb.debian.org/debian unstable/main arm64 libgmp-dev arm64 2:6.3.0+dfsg-3 [621 kB]
Get: 286 http://deb.debian.org/debian unstable/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10+b1 [170 kB]
Get: 287 http://deb.debian.org/debian unstable/main arm64 libunbound8 arm64 1.22.0-1+b1 [553 kB]
Get: 288 http://deb.debian.org/debian unstable/main arm64 libgnutls-dane0t64 arm64 3.8.9-2 [452 kB]
Get: 289 http://deb.debian.org/debian unstable/main arm64 libgnutls-openssl27t64 arm64 3.8.9-2 [452 kB]
Get: 290 http://deb.debian.org/debian unstable/main arm64 libp11-kit-dev arm64 0.25.5-3 [208 kB]
Get: 291 http://deb.debian.org/debian unstable/main arm64 libtasn1-6-dev arm64 4.20.0-2 [96.7 kB]
Get: 292 http://deb.debian.org/debian unstable/main arm64 nettle-dev arm64 3.10.1-1 [1325 kB]
Get: 293 http://deb.debian.org/debian unstable/main arm64 libgnutls28-dev arm64 3.8.9-2 [1419 kB]
Get: 294 http://deb.debian.org/debian unstable/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB]
Get: 295 http://deb.debian.org/debian unstable/main arm64 librtmp-dev arm64 2.4+20151223.gitfa8646d.1-2+b5 [67.5 kB]
Get: 296 http://deb.debian.org/debian unstable/main arm64 libssl-dev arm64 3.5.0-1 [3383 kB]
Get: 297 http://deb.debian.org/debian unstable/main arm64 libssh2-1-dev arm64 1.11.1-1 [388 kB]
Get: 298 http://deb.debian.org/debian unstable/main arm64 libzstd-dev arm64 1.5.7+dfsg-1 [335 kB]
Get: 299 http://deb.debian.org/debian unstable/main arm64 libcurl4-openssl-dev arm64 8.13.0-2 [479 kB]
Get: 300 http://deb.debian.org/debian unstable/main arm64 libgfortran5 arm64 14.2.0-19 [361 kB]
Get: 301 http://deb.debian.org/debian unstable/main arm64 libhdf5-310 arm64 1.14.5+repack-3 [1155 kB]
Get: 302 http://deb.debian.org/debian unstable/main arm64 libhdf5-cpp-310 arm64 1.14.5+repack-3 [121 kB]
Get: 303 http://deb.debian.org/debian unstable/main arm64 libhdf5-fortran-310 arm64 1.14.5+repack-3 [110 kB]
Get: 304 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-310 arm64 1.14.5+repack-3 [66.1 kB]
Get: 305 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-fortran-310 arm64 1.14.5+repack-3 [42.1 kB]
Get: 306 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-cpp-310 arm64 1.14.5+repack-3 [24.4 kB]
Get: 307 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo-dev arm64 1:2.1.5-3.1 [293 kB]
Get: 308 http://deb.debian.org/debian unstable/main arm64 libjpeg-dev arm64 1:2.1.5-3.1 [72.0 kB]
Get: 309 http://deb.debian.org/debian unstable/main arm64 libhdf5-dev arm64 1.14.5+repack-3 [3225 kB]
Get: 310 http://deb.debian.org/debian unstable/main arm64 liblzma-dev arm64 5.8.1-1 [344 kB]
Get: 311 http://deb.debian.org/debian unstable/main arm64 libmagic-dev arm64 1:5.46-5 [117 kB]
Get: 312 http://deb.debian.org/debian unstable/main arm64 libmbedcrypto16 arm64 3.6.3-1 [343 kB]
Get: 313 http://deb.debian.org/debian unstable/main arm64 libmbedx509-7 arm64 3.6.3-1 [148 kB]
Get: 314 http://deb.debian.org/debian unstable/main arm64 libmbedtls21 arm64 3.6.3-1 [224 kB]
Get: 315 http://deb.debian.org/debian unstable/main arm64 libmbedtls-dev arm64 3.6.3-1 [816 kB]
Get: 316 http://deb.debian.org/debian unstable/main arm64 ncbi-vdb-data all 3.2.1+dfsg-2 [88.5 kB]
Get: 317 http://deb.debian.org/debian unstable/main arm64 libncbi-vdb3 arm64 3.2.1+dfsg-2 [1096 kB]
Get: 318 http://deb.debian.org/debian unstable/main arm64 libncbi-wvdb3 arm64 3.2.1+dfsg-2 [1097 kB]
Get: 319 http://deb.debian.org/debian unstable/main arm64 libncbi-wvdb-dev arm64 3.2.1+dfsg-2 [1269 kB]
Get: 320 http://deb.debian.org/debian unstable/main arm64 libncbi-vdb-dev arm64 3.2.1+dfsg-2 [1572 kB]
Get: 321 http://deb.debian.org/debian unstable/main arm64 libre2-11 arm64 20240702-3+b1 [149 kB]
Get: 322 http://deb.debian.org/debian unstable/main arm64 libre2-dev arm64 20240702-3+b1 [212 kB]
Get: 323 http://deb.debian.org/debian unstable/main arm64 libsam-extract3 arm64 3.2.1+dfsg-2 [43.3 kB]
Get: 324 http://deb.debian.org/debian unstable/main arm64 libsam-extract-dev arm64 3.2.1+dfsg-2 [47.0 kB]
Get: 325 http://deb.debian.org/debian unstable/main arm64 libxml2-dev arm64 2.12.7+dfsg+really2.9.14-0.4 [750 kB]
Get: 326 http://deb.debian.org/debian unstable/main arm64 maven-repo-helper all 1.11 [142 kB]
Get: 327 http://deb.debian.org/debian unstable/main arm64 python3-all arm64 3.13.3-1 [1048 B]
Get: 328 http://deb.debian.org/debian unstable/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB]
Get: 329 http://deb.debian.org/debian unstable/main arm64 python3-more-itertools all 10.6.0-1 [65.3 kB]
Get: 330 http://deb.debian.org/debian unstable/main arm64 python3-typing-extensions all 4.13.2-1 [90.5 kB]
Get: 331 http://deb.debian.org/debian unstable/main arm64 python3-typeguard all 4.4.2-1 [37.3 kB]
Get: 332 http://deb.debian.org/debian unstable/main arm64 python3-inflect all 7.3.1-2 [32.4 kB]
Get: 333 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get: 334 http://deb.debian.org/debian unstable/main arm64 python3-pkg-resources all 78.1.0-1.1 [224 kB]
Get: 335 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB]
Get: 336 http://deb.debian.org/debian unstable/main arm64 python3-zipp all 3.21.0-1 [10.6 kB]
Get: 337 http://deb.debian.org/debian unstable/main arm64 python3-setuptools all 78.1.0-1.1 [738 kB]
Get: 338 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.context all 6.0.1-1 [8276 B]
Fetched 269 MB in 1s (189 MB/s)
Preconfiguring packages ...
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Selecting previously unselected package libapparmor1:arm64.
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Unpacking libapparmor1:arm64 (4.1.0-1) ...
Setting up libsystemd-shared:arm64 (257.5-2) ...
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Unpacking systemd (257.5-2) ...
Setting up libapparmor1:arm64 (4.1.0-1) ...
Setting up systemd (257.5-2) ...
Created symlink '/etc/systemd/system/getty.target.wants/getty@tty1.service' -> '/usr/lib/systemd/system/getty@.service'.

Created symlink '/etc/systemd/system/multi-user.target.wants/remote-fs.target' -> '/usr/lib/systemd/system/remote-fs.target'.

Created symlink '/etc/systemd/system/sysinit.target.wants/systemd-pstore.service' -> '/usr/lib/systemd/system/systemd-pstore.service'.

Initializing machine ID from random generator.

Creating group 'systemd-journal' with GID 999.

Creating group 'systemd-network' with GID 998.

Creating user 'systemd-network' (systemd Network Management) with UID 998 and GID 998.

/usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring.

Selecting previously unselected package systemd-sysv.
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Selecting previously unselected package libdbus-1-3:arm64.
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Unpacking dbus-bin (1.16.2-2) ...
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Unpacking dbus-session-bus-common (1.16.2-2) ...
Selecting previously unselected package libexpat1:arm64.
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Unpacking libexpat1:arm64 (2.7.1-1) ...
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Unpacking dbus (1.16.2-2) ...
Selecting previously unselected package libpipeline1:arm64.
Preparing to unpack .../08-libpipeline1_1.5.8-1_arm64.deb ...
Unpacking libpipeline1:arm64 (1.5.8-1) ...
Selecting previously unselected package binfmt-support.
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Unpacking binfmt-support (2.2.2-7+b1) ...
Selecting previously unselected package m4.
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Unpacking m4 (1.4.19-7) ...
Selecting previously unselected package flex.
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Unpacking flex (2.6.4-8.2+b4) ...
Selecting previously unselected package libpython3.13-minimal:arm64.
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Unpacking libpython3.13-minimal:arm64 (3.13.3-2) ...
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Unpacking python3.13-minimal (3.13.3-2) ...
Setting up libpython3.13-minimal:arm64 (3.13.3-2) ...
Setting up libexpat1:arm64 (2.7.1-1) ...
Setting up python3.13-minimal (3.13.3-2) ...
Selecting previously unselected package python3-minimal.
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Selecting previously unselected package libffi8:arm64.
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Selecting previously unselected package readline-common.
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Selecting previously unselected package libreadline8t64:arm64.
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Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
Unpacking libreadline8t64:arm64 (8.2-6) ...
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Unpacking procps (2:4.0.4-8) ...
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Unpacking sensible-utils (0.0.24) ...
Selecting previously unselected package openssl.
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Unpacking openssl (3.5.0-1) ...
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Unpacking ca-certificates (20241223) ...
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Unpacking libmagic-mgc (1:5.46-5) ...
Selecting previously unselected package libmagic1t64:arm64.
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Unpacking file (1:5.46-5) ...
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Unpacking gettext-base (0.23.1-1) ...
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Unpacking libuchardet0:arm64 (0.0.8-1+b2) ...
Selecting previously unselected package groff-base.
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Unpacking groff-base (1.23.0-7) ...
Selecting previously unselected package libpam-systemd:arm64.
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Unpacking libpam-systemd:arm64 (257.5-2) ...
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Unpacking bsdextrautils (2.41-4) ...
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Unpacking man-db (2.13.0-1) ...
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Unpacking libgdk-pixbuf2.0-common (2.42.12+dfsg-2) ...
Selecting previously unselected package libglib2.0-0t64:arm64.
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Unpacking libglib2.0-0t64:arm64 (2.84.1-1) ...
Selecting previously unselected package libxml2:arm64.
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Unpacking libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.4) ...
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Current default time zone: 'Etc/UTC'
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Universal Time is now:  Wed May 20 15:04:47 UTC 2026.
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invoke-rc.d: policy-rc.d denied execution of start.
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Creating user 'messagebus' (System Message Bus) with UID 997 and GID 997.

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Setting up libbrotli-dev:arm64 (1.1.0-2+b7) ...
Setting up libfile-touch-perl (0.12-2) ...
Setting up libsz2:arm64 (1.1.3-1+b1) ...
Setting up dctrl-tools (2.24-3+b1) ...
Setting up libbz2-dev:arm64 (1.0.8-6) ...
Setting up libxkbcommon0:arm64 (1.7.0-2) ...
Setting up libwayland-client0:arm64 (1.23.1-3) ...
Setting up libnet-ssleay-perl:arm64 (1.94-3) ...
Setting up automake (1:1.17-4) ...
update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode
Setting up libksba8:arm64 (1.6.7-2+b1) ...
Setting up pinentry-curses (1.3.1-2) ...
Setting up libfile-stripnondeterminism-perl (1.14.1-2) ...
Setting up libxcb-dri3-0:arm64 (1.17.0-2+b1) ...
Setting up libllvm19:arm64 (1:19.1.7-3) ...
Setting up libwayland-server0:arm64 (1.23.1-3) ...
Setting up libx11-xcb1:arm64 (2:1.8.12-1) ...
Setting up libhttp-date-perl (6.06-1) ...
Setting up libre2-11:arm64 (20240702-3+b1) ...
Setting up flex (2.6.4-8.2+b4) ...
Setting up gettext (0.23.1-1) ...
Setting up libxdamage1:arm64 (1:1.1.6-1+b2) ...
Setting up libgmp-dev:arm64 (2:6.3.0+dfsg-3) ...
Setting up libfile-listing-perl (6.16-1) ...
Setting up nettle-dev:arm64 (3.10.1-1) ...
Setting up libxrender1:arm64 (1:0.9.12-1) ...
Setting up jarwrapper (0.80) ...
Setting up libtool (2.5.4-4) ...
Setting up fontconfig-config (2.15.0-2.3) ...
Setting up libaec-dev:arm64 (1.1.3-1+b1) ...
Setting up libavahi-common3:arm64 (0.8-16) ...
Setting up libjpeg-dev:arm64 (1:2.1.5-3.1) ...
Setting up libxext6:arm64 (2:1.3.4-1+b3) ...
Setting up libnet-http-perl (6.23-1) ...
Setting up libidn2-0:arm64 (2.3.8-2) ...
Setting up libnss3:arm64 (2:3.110-1) ...
Setting up dbus-daemon (1.16.2-2) ...
Setting up libdevel-callchecker-perl:arm64 (0.009-2) ...
Setting up pkgconf:arm64 (1.8.1-4) ...
Setting up libxxf86vm1:arm64 (1:1.1.4-1+b4) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up dh-autoreconf (20) ...
Setting up patchutils (0.4.2-1+b1) ...
Setting up libthai0:arm64 (0.1.29-2+b1) ...
Setting up ca-certificates (20241223) ...
Updating certificates in /etc/ssl/certs...
152 added, 0 removed; done.
Setting up libxml2-dev:arm64 (2.12.7+dfsg+really2.9.14-0.4) ...
Setting up libglib2.0-0t64:arm64 (2.84.1-1) ...
Setting up libmbedx509-7:arm64 (3.6.3-1) ...
Setting up libfreetype6:arm64 (2.13.3+dfsg-1) ...
Setting up libxfixes3:arm64 (1:6.0.0-2+b4) ...
Setting up libldap-dev:arm64 (2.6.9+dfsg-2) ...
Setting up dbus (1.16.2-2) ...
Running in chroot, ignoring request.

invoke-rc.d: policy-rc.d denied execution of start.
Setting up shared-mime-info (2.4-5+b2) ...
Setting up libp11-kit0:arm64 (0.25.5-3) ...
Setting up libxinerama1:arm64 (2:1.1.4-3+b4) ...
Setting up libgssapi-krb5-2:arm64 (1.21.3-5) ...
Setting up libxrandr2:arm64 (2:1.5.4-1+b3) ...
Setting up libssh2-1-dev:arm64 (1.11.1-1) ...
Setting up libidn2-dev:arm64 (2.3.8-2) ...
Setting up libmbedtls21:arm64 (3.6.3-1) ...
Setting up libreadline8t64:arm64 (8.2-6) ...
Setting up dh-strip-nondeterminism (1.14.1-2) ...
Setting up libwww-robotrules-perl (6.02-1) ...
Setting up libdrm2:arm64 (2.4.124-2) ...
Setting up groff-base (1.23.0-7) ...
Setting up libwayland-cursor0:arm64 (1.23.1-3) ...
Setting up libhtml-parser-perl:arm64 (3.83-1+b2) ...
Setting up gpgconf (2.4.7-15) ...
Setting up libpam-systemd:arm64 (257.5-2) ...
Setting up libharfbuzz0b:arm64 (10.2.0-1+b1) ...
Setting up libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-2) ...
Setting up libfontconfig1:arm64 (2.15.0-2.3) ...
Setting up ca-certificates-java (20240118) ...
No JRE found. Skipping Java certificates setup.
Setting up libre2-dev:arm64 (20240702-3+b1) ...
Setting up libarchive13t64:arm64 (3.7.4-1.1) ...
Setting up libpython3.13-stdlib:arm64 (3.13.3-2) ...
Setting up libavahi-client3:arm64 (0.8-16) ...
Setting up libio-socket-ssl-perl (2.089-1) ...
Setting up gpg (2.4.7-15) ...
Created symlink '/etc/systemd/user/sockets.target.wants/keyboxd.socket' -> '/usr/lib/systemd/user/keyboxd.socket'.

Setting up libp11-kit-dev:arm64 (0.25.5-3) ...
Setting up libpython3-stdlib:arm64 (3.13.3-1) ...
Setting up libhttp-message-perl (7.00-2) ...
Setting up libdrm-amdgpu1:arm64 (2.4.124-2) ...
Setting up libgnutls30t64:arm64 (3.8.9-2) ...
Setting up libgnutls-openssl27t64:arm64 (3.8.9-2) ...
Setting up gtk-update-icon-cache (4.18.4+ds-1) ...
Setting up libnghttp2-dev:arm64 (1.64.0-1.1) ...
Setting up libhttp-negotiate-perl (6.01-2) ...
Setting up mesa-libgallium:arm64 (25.0.3-1) ...
Setting up fontconfig (2.15.0-2.3) ...
Regenerating fonts cache... done.
Setting up gpg-agent (2.4.7-15) ...
Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent-browser.socket' -> '/usr/lib/systemd/user/gpg-agent-browser.socket'.

Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent-extra.socket' -> '/usr/lib/systemd/user/gpg-agent-extra.socket'.

Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent-ssh.socket' -> '/usr/lib/systemd/user/gpg-agent-ssh.socket'.

Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent.socket' -> '/usr/lib/systemd/user/gpg-agent.socket'.

Setting up libatk1.0-0t64:arm64 (2.56.1-2) ...
Setting up openjdk-21-jre-headless:arm64 (21.0.7~8ea-1) ...
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/java to provide /usr/bin/java (java) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode
Setting up libxi6:arm64 (2:1.8.2-1) ...
Setting up libgbm1:arm64 (25.0.3-1) ...
Setting up libhttp-cookies-perl (6.11-1) ...
Setting up python3.13 (3.13.3-2) ...
Setting up libxtst6:arm64 (2:1.2.5-1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libhtml-tree-perl (5.07-3) ...
Setting up libxcursor1:arm64 (1:1.2.3-1) ...
Setting up libparams-classify-perl:arm64 (0.015-2+b4) ...
Setting up libpango-1.0-0:arm64 (1.56.3-1) ...
Setting up libgl1-mesa-dri:arm64 (25.0.3-1) ...
Setting up libpsl5t64:arm64 (0.21.2-1.1+b1) ...
Setting up libncbi-vdb3:arm64 (3.2.1+dfsg-2) ...
Setting up libcloudproviders0:arm64 (0.3.6-2) ...
Setting up python3 (3.13.3-1) ...
Setting up libmbedtls-dev:arm64 (3.6.3-1) ...
Setting up sopv-gpgv (0.1.4-1) ...
update-alternatives: using /usr/bin/sopv-gpgv to provide /usr/bin/sopv (sopv) in auto mode
Setting up python3-zipp (3.21.0-1) ...
Setting up python3-autocommand (2.2.2-3) ...
Setting up man-db (2.13.0-1) ...
Not building database; man-db/auto-update is not 'true'.
Created symlink '/etc/systemd/system/timers.target.wants/man-db.timer' -> '/usr/lib/systemd/system/man-db.timer'.

Setting up libcairo2:arm64 (1.18.4-1+b1) ...
Setting up libcolord2:arm64 (1.4.7-3) ...
Setting up libpsl-dev:arm64 (0.21.2-1.1+b1) ...
Setting up libdconf1:arm64 (0.40.0-5) ...
Setting up dbus-user-session (1.16.2-2) ...
Setting up libgnutls-dane0t64:arm64 (3.8.9-2) ...
Setting up adwaita-icon-theme (48.0-1) ...
update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode
Setting up libmodule-runtime-perl (0.017-1) ...
Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ...
Setting up libgssrpc4t64:arm64 (1.21.3-5) ...
Setting up libatspi2.0-0t64:arm64 (2.56.1-2) ...
Setting up libncbi-wvdb3:arm64 (3.2.1+dfsg-2) ...
Setting up python3-typing-extensions (4.13.2-1) ...
Setting up libcairo-gobject2:arm64 (1.18.4-1+b1) ...
Setting up libncbi-wvdb-dev:arm64 (3.2.1+dfsg-2) ...
Setting up libpangoft2-1.0-0:arm64 (1.56.3-1) ...
Setting up libcups2t64:arm64 (2.4.10-2+b1) ...
Setting up libpangocairo-1.0-0:arm64 (1.56.3-1) ...
Setting up libkadm5clnt-mit12:arm64 (1.21.3-5) ...
Setting up dh-python (6.20250414) ...
Setting up libgnutls28-dev:arm64 (3.8.9-2) ...
Setting up libatk-bridge2.0-0t64:arm64 (2.56.1-2) ...
Setting up python3-more-itertools (10.6.0-1) ...
Setting up libglx-mesa0:arm64 (25.0.3-1) ...
Setting up python3-jaraco.functools (4.1.0-1) ...
Setting up libglx0:arm64 (1.7.0-1+b2) ...
Setting up python3-jaraco.context (6.0.1-1) ...
Setting up libcurl4t64:arm64 (8.13.0-2) ...
Setting up libkdb5-10t64:arm64 (1.21.3-5) ...
Setting up libimport-into-perl (1.002005-2) ...
Setting up libmoo-perl (2.005005-1) ...
Setting up python3-typeguard (4.4.2-1) ...
Setting up python3-all (3.13.3-1) ...
Setting up debhelper (13.24.2) ...
Setting up dconf-service (0.40.0-5) ...
Setting up python3-inflect (7.3.1-2) ...
Setting up libgl1:arm64 (1.7.0-1+b2) ...
Setting up python3-jaraco.text (4.0.0-1) ...
Setting up librtmp-dev:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ...
Setting up libhdf5-310:arm64 (1.14.5+repack-3) ...
Setting up libkadm5srv-mit12:arm64 (1.21.3-5) ...
Setting up cmake (3.31.6-2) ...
Setting up libncbi-vdb-dev:arm64 (3.2.1+dfsg-2) ...
Setting up libhdf5-fortran-310:arm64 (1.14.5+repack-3) ...
Setting up krb5-multidev:arm64 (1.21.3-5) ...
Setting up libhdf5-cpp-310:arm64 (1.14.5+repack-3) ...
Setting up python3-pkg-resources (78.1.0-1.1) ...
Setting up libhdf5-hl-310:arm64 (1.14.5+repack-3) ...
Setting up python3-setuptools (78.1.0-1.1) ...
Setting up dconf-gsettings-backend:arm64 (0.40.0-5) ...
Setting up libkrb5-dev:arm64 (1.21.3-5) ...
Setting up libcurl4-openssl-dev:arm64 (8.13.0-2) ...
Setting up libgtk-3-common (3.24.49-3) ...
Setting up libhdf5-hl-cpp-310:arm64 (1.14.5+repack-3) ...
Setting up libhdf5-hl-fortran-310:arm64 (1.14.5+repack-3) ...
Setting up libgtk-3-0t64:arm64 (3.24.49-3) ...
Setting up libhdf5-dev (1.14.5+repack-3) ...
update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
Setting up liblwp-protocol-https-perl (6.14-1) ...
Setting up libwww-perl (6.78-1) ...
Setting up devscripts (2.25.9) ...
Setting up javahelper (0.80) ...
Processing triggers for libc-bin (2.41-7) ...
Processing triggers for systemd (257.5-2) ...
Processing triggers for ca-certificates-java (20240118) ...
Adding debian:ACCVRAIZ1.pem
Adding debian:AC_RAIZ_FNMT-RCM.pem
Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem
Adding debian:ANF_Secure_Server_Root_CA.pem
Adding debian:Actalis_Authentication_Root_CA.pem
Adding debian:AffirmTrust_Commercial.pem
Adding debian:AffirmTrust_Networking.pem
Adding debian:AffirmTrust_Premium.pem
Adding debian:AffirmTrust_Premium_ECC.pem
Adding debian:Amazon_Root_CA_1.pem
Adding debian:Amazon_Root_CA_2.pem
Adding debian:Amazon_Root_CA_3.pem
Adding debian:Amazon_Root_CA_4.pem
Adding debian:Atos_TrustedRoot_2011.pem
Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem
Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem
Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
Adding debian:BJCA_Global_Root_CA1.pem
Adding debian:BJCA_Global_Root_CA2.pem
Adding debian:Baltimore_CyberTrust_Root.pem
Adding debian:Buypass_Class_2_Root_CA.pem
Adding debian:Buypass_Class_3_Root_CA.pem
Adding debian:CA_Disig_Root_R2.pem
Adding debian:CFCA_EV_ROOT.pem
Adding debian:COMODO_Certification_Authority.pem
Adding debian:COMODO_ECC_Certification_Authority.pem
Adding debian:COMODO_RSA_Certification_Authority.pem
Adding debian:Certainly_Root_E1.pem
Adding debian:Certainly_Root_R1.pem
Adding debian:Certigna.pem
Adding debian:Certigna_Root_CA.pem
Adding debian:Certum_EC-384_CA.pem
Adding debian:Certum_Trusted_Network_CA.pem
Adding debian:Certum_Trusted_Network_CA_2.pem
Adding debian:Certum_Trusted_Root_CA.pem
Adding debian:CommScope_Public_Trust_ECC_Root-01.pem
Adding debian:CommScope_Public_Trust_ECC_Root-02.pem
Adding debian:CommScope_Public_Trust_RSA_Root-01.pem
Adding debian:CommScope_Public_Trust_RSA_Root-02.pem
Adding debian:Comodo_AAA_Services_root.pem
Adding debian:D-TRUST_BR_Root_CA_1_2020.pem
Adding debian:D-TRUST_EV_Root_CA_1_2020.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
Adding debian:DigiCert_Assured_ID_Root_CA.pem
Adding debian:DigiCert_Assured_ID_Root_G2.pem
Adding debian:DigiCert_Assured_ID_Root_G3.pem
Adding debian:DigiCert_Global_Root_CA.pem
Adding debian:DigiCert_Global_Root_G2.pem
Adding debian:DigiCert_Global_Root_G3.pem
Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem
Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem
Adding debian:DigiCert_Trusted_Root_G4.pem
Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
Adding debian:Entrust_Root_Certification_Authority.pem
Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem
Adding debian:Entrust_Root_Certification_Authority_-_G2.pem
Adding debian:Entrust_Root_Certification_Authority_-_G4.pem
Adding debian:FIRMAPROFESIONAL_CA_ROOT-A_WEB.pem
Adding debian:GDCA_TrustAUTH_R5_ROOT.pem
Adding debian:GLOBALTRUST_2020.pem
Adding debian:GTS_Root_R1.pem
Adding debian:GTS_Root_R2.pem
Adding debian:GTS_Root_R3.pem
Adding debian:GTS_Root_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem
Adding debian:GlobalSign_Root_CA.pem
Adding debian:GlobalSign_Root_CA_-_R3.pem
Adding debian:GlobalSign_Root_CA_-_R6.pem
Adding debian:GlobalSign_Root_E46.pem
Adding debian:GlobalSign_Root_R46.pem
Adding debian:Go_Daddy_Class_2_CA.pem
Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem
Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem
Adding debian:HiPKI_Root_CA_-_G1.pem
Adding debian:Hongkong_Post_Root_CA_3.pem
Adding debian:ISRG_Root_X1.pem
Adding debian:ISRG_Root_X2.pem
Adding debian:IdenTrust_Commercial_Root_CA_1.pem
Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem
Adding debian:Izenpe.com.pem
Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem
Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem
Adding debian:NAVER_Global_Root_Certification_Authority.pem
Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem
Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem
Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem
Adding debian:QuoVadis_Root_CA_1_G3.pem
Adding debian:QuoVadis_Root_CA_2.pem
Adding debian:QuoVadis_Root_CA_2_G3.pem
Adding debian:QuoVadis_Root_CA_3.pem
Adding debian:QuoVadis_Root_CA_3_G3.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem
Adding debian:SSL.com_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_Root_Certification_Authority_RSA.pem
Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem
Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem
Adding debian:SZAFIR_ROOT_CA2.pem
Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem
Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem
Adding debian:SecureSign_RootCA11.pem
Adding debian:SecureSign_Root_CA12.pem
Adding debian:SecureSign_Root_CA14.pem
Adding debian:SecureSign_Root_CA15.pem
Adding debian:SecureTrust_CA.pem
Adding debian:Secure_Global_CA.pem
Adding debian:Security_Communication_ECC_RootCA1.pem
Adding debian:Security_Communication_RootCA2.pem
Adding debian:Security_Communication_RootCA3.pem
Adding debian:Starfield_Class_2_CA.pem
Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
Adding debian:SwissSign_Gold_CA_-_G2.pem
Adding debian:SwissSign_Silver_CA_-_G2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem
Adding debian:TWCA_CYBER_Root_CA.pem
Adding debian:TWCA_Global_Root_CA.pem
Adding debian:TWCA_Root_Certification_Authority.pem
Adding debian:Telekom_Security_TLS_ECC_Root_2020.pem
Adding debian:Telekom_Security_TLS_RSA_Root_2023.pem
Adding debian:TeliaSonera_Root_CA_v1.pem
Adding debian:Telia_Root_CA_v2.pem
Adding debian:TrustAsia_Global_Root_CA_G3.pem
Adding debian:TrustAsia_Global_Root_CA_G4.pem
Adding debian:Trustwave_Global_Certification_Authority.pem
Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem
Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem
Adding debian:TunTrust_Root_CA.pem
Adding debian:UCA_Extended_Validation_Root.pem
Adding debian:UCA_Global_G2_Root.pem
Adding debian:USERTrust_ECC_Certification_Authority.pem
Adding debian:USERTrust_RSA_Certification_Authority.pem
Adding debian:XRamp_Global_CA_Root.pem
Adding debian:certSIGN_ROOT_CA.pem
Adding debian:certSIGN_Root_CA_G2.pem
Adding debian:e-Szigno_Root_CA_2017.pem
Adding debian:ePKI_Root_Certification_Authority.pem
Adding debian:emSign_ECC_Root_CA_-_C3.pem
Adding debian:emSign_ECC_Root_CA_-_G3.pem
Adding debian:emSign_Root_CA_-_C1.pem
Adding debian:emSign_Root_CA_-_G1.pem
Adding debian:vTrus_ECC_Root_CA.pem
Adding debian:vTrus_Root_CA.pem
done.
Setting up openjdk-21-jre:arm64 (21.0.7~8ea-1) ...
Setting up openjdk-21-jdk-headless:arm64 (21.0.7~8ea-1) ...
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jar to provide /usr/bin/jar (jar) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/javac to provide /usr/bin/javac (javac) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/javap to provide /usr/bin/javap (javap) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jps to provide /usr/bin/jps (jps) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jwebserver to provide /usr/bin/jwebserver (jwebserver) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode
Setting up default-jre-headless (2:1.21-76) ...
Setting up maven-repo-helper (1.11) ...
Setting up default-jre (2:1.21-76) ...
Setting up openjdk-21-jdk:arm64 (21.0.7~8ea-1) ...
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode
Setting up default-jdk-headless (2:1.21-76) ...
Setting up default-jdk (2:1.21-76) ...
Processing triggers for ca-certificates (20241223) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for ca-certificates-java (20240118) ...
done.
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
 -> Finished parsing the build-deps
I: Building the package
I: Running cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S  > ../sra-sdk_3.2.1+dfsg-4_source.changes
dpkg-buildpackage: info: source package sra-sdk
dpkg-buildpackage: info: source version 3.2.1+dfsg-4
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Aaron M. Ucko <ucko@debian.org>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture arm64
 debian/rules clean
dh clean --buildsystem=cmake \
    --with python3,javahelper,jh_maven_repo_helper
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg'
dh_auto_clean
rm -rf ngs/ngs-java/aarch64-linux-gnu
rm -rf ngs/ngs-bam/aarch64-linux-gnu
rm -f ngs/ngs-bam/Makefile.config
rm -f ngs/ngs-bam/Makefile.config.install.linux.x86_64.prl
rm -f ngs/ngs-bam/Makefile.config.linux.x86_64
rm -f ngs/ngs-bam/reconfigure
rm -rf ngs/ngs-sdk/ngs/unix/generic
rm -rf ngs/ngs-sdk/aarch64-linux-gnu
rm -rf ngs/ngs-python/build ngs/ngs-python/dist
rm -rf ngs/ngs-python/ngs.egg-info
find test tools -name actual -type d | xargs -rt rm -rf
rm -rf ngs/ngs-*/examples/actual/*
rm -fv test/*/*/tmp.kfg
rm -rf libs/general-writer/test/actual
rm -rf libs/ngs-vdb/test/data/SparseFragmentBlobs
rm -rf test/external/vdb-dump/db test/loaders/bam-load/out.sra
rm -rf test/schema/test_*.db test/vdb/db
find tools/loaders/general-loader/test -name input | xargs -rt rm -rf
rm -f ngs/ngs-sdk/examples/actual.txt
rm -f debian/libngs-jni.links
rm -rf .pybuild
make[1]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg'
   dh_autoreconf_clean -O--buildsystem=cmake
   jh_clean -O--buildsystem=cmake
Duplicate specification "u=s" for option "u"
   dh_clean -O--buildsystem=cmake
 debian/rules binary
dh binary --buildsystem=cmake \
    --with python3,javahelper,jh_maven_repo_helper
   dh_update_autotools_config -O--buildsystem=cmake
   dh_autoreconf -O--buildsystem=cmake
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg'
dh_auto_configure -- -DVDB_LIBDIR=/usr/lib/aarch64-linux-gnu \
    -DVDB_INCDIR=/usr/include/ncbi-vdb -DBUILD_TOOLS_LOADERS=ON \
    -DBUILD_TOOLS_INTERNAL=ON -DBUILD_TOOLS_TEST_TOOLS=ON \
    -DCMAKE_SKIP_RPATH=ON -DTOOLS_ONLY=OFF \
    -DCOMPILER_OPTION_SSE42_SUPPORTED=FALSE
	cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DVDB_LIBDIR=/usr/lib/aarch64-linux-gnu -DVDB_INCDIR=/usr/include/ncbi-vdb -DBUILD_TOOLS_LOADERS=ON -DBUILD_TOOLS_INTERNAL=ON -DBUILD_TOOLS_TEST_TOOLS=ON -DCMAKE_SKIP_RPATH=ON -DTOOLS_ONLY=OFF -DCOMPILER_OPTION_SSE42_SUPPORTED=FALSE ..
CMAKE_VERSION=3.31.6
-- The C compiler identification is GNU 14.2.0
-- The CXX compiler identification is GNU 14.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
CMake Deprecation Warning at build/env.cmake:32 (cmake_policy):
  The OLD behavior for policy CMP0115 will be removed from a future version
  of CMake.

  The cmake-policies(7) manual explains that the OLD behaviors of all
  policies are deprecated and that a policy should be set to OLD only under
  specific short-term circumstances.  Projects should be ported to the NEW
  behavior and not rely on setting a policy to OLD.
Call Stack (most recent call first):
  CMakeLists.txt:62 (include)


BUILD_TOOLS_INTERNAL=ON
BUILD_TOOLS_LOADERS=ON
BUILD_TOOLS_TEST_TOOLS=ON
TOOLS_ONLY=OFF
VERSION=3.2.1
-- Found FLEX: /usr/bin/flex (found suitable version "2.6.4", minimum required is "2.6")
-- Found BISON: /usr/bin/bison (found suitable version "3.8.2", minimum required is "3")
-- Found LibXml2: /usr/lib/aarch64-linux-gnu/libxml2.so (found version "2.9.14")
LIBXML2_INCLUDE_DIR=/usr/include/libxml2
LIBXML2_LIBRARIES=/usr/lib/aarch64-linux-gnu/libxml2.so
-- Found Java: /usr/bin/java (found version "21.0.7") found components: Development
-- Found Python3: /usr/bin/python3 (found version "3.13.3") found components: Interpreter
Using ncbi-vdb interfaces: /usr/include/ncbi-vdb
Using ncbi-vdb binary libraries: /usr/lib/aarch64-linux-gnu
-- Looking for C++ include mbedtls/md.h
-- Looking for C++ include mbedtls/md.h - found
-- Performing Test HAVE_MBEDTLS_F
-- Performing Test HAVE_MBEDTLS_F - Failed
RUN_SANITIZER_TESTS: OFF
-- Found JNI: /usr/lib/jvm/default-java/include  found components: AWT JVM
-- Found ZLIB: /usr/lib/aarch64-linux-gnu/libz.so (found version "1.3.1")
-- Found BZip2: /usr/lib/aarch64-linux-gnu/libbz2.so (found version "1.0.8")
-- Looking for BZ2_bzCompressInit
-- Looking for BZ2_bzCompressInit - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE
RE2_FOUND=TRUE
-- Found HDF5: /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/aarch64-linux-gnu/libcrypto.so;/usr/lib/aarch64-linux-gnu/libcurl.so;/usr/lib/aarch64-linux-gnu/libpthread.a;/usr/lib/aarch64-linux-gnu/libsz.so;/usr/lib/aarch64-linux-gnu/libz.so;/usr/lib/aarch64-linux-gnu/libdl.a;/usr/lib/aarch64-linux-gnu/libm.so (found version "1.14.5") found components: C
CMake Deprecation Warning at tools/test-tools/qa-stats/CMakeLists.txt:1 (cmake_minimum_required):
  Compatibility with CMake < 3.10 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value.  Or, use the <min>...<max> syntax
  to tell CMake that the project requires at least <min> but has been updated
  to work with policies introduced by <max> or earlier.


CMake Deprecation Warning at tools/test-tools/rnd2sra/CMakeLists.txt:25 (cmake_minimum_required):
  Compatibility with CMake < 3.10 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value.  Or, use the <min>...<max> syntax
  to tell CMake that the project requires at least <min> but has been updated
  to work with policies introduced by <max> or earlier.


RE2_FOUND=TRUE
-- Configuring done (6.4s)
-- Generating done (1.6s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
    CMAKE_INSTALL_LOCALSTATEDIR
    CMAKE_INSTALL_RUNSTATEDIR
    CMAKE_INSTALL_SYSCONFDIR
    FETCHCONTENT_FULLY_DISCONNECTED


-- Build files have been written to: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu
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   jh_linkjars -O--buildsystem=cmake
Duplicate specification "u=s" for option "u"
   dh_auto_build -O--buildsystem=cmake
	cd obj-aarch64-linux-gnu && make -j12 "INSTALL=install --strip-program=true" VERBOSE=1
make[1]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
/usr/bin/cmake -S/build/reproducible-path/sra-sdk-3.2.1+dfsg -B/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/CMakeFiles /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu//CMakeFiles/progress.marks
make  -f CMakeFiles/Makefile2 all
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/shared /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/shared /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/shared/CMakeFiles/tk-version.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs/CMakeFiles/ngs.dir/DependInfo.cmake "--color="
make  -f ngs/ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/build.make ngs/ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-jni /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-py /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-py/CMakeFiles/ngs-py.dir/DependInfo.cmake "--color="
make  -f ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/build.make ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/c++ /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/DependInfo.cmake "--color="
make  -f ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/build.make ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/depend
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/dispatch /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/DependInfo.cmake "--color="
make  -f shared/CMakeFiles/tk-version.dir/build.make shared/CMakeFiles/tk-version.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/build.make ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/depend
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/python /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/java /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/DependInfo.cmake "--color="
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make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[  0%] Building C object shared/CMakeFiles/tk-version.dir/toolkit.vers.c.o
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/shared && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"shared\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT shared/CMakeFiles/tk-version.dir/toolkit.vers.c.o -MF CMakeFiles/tk-version.dir/toolkit.vers.c.o.d -o CMakeFiles/tk-version.dir/toolkit.vers.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/shared/toolkit.vers.c
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NCBI-NGS.c.o -MF CMakeFiles/ngs.dir/NCBI-NGS.c.o.d -o CMakeFiles/ngs.dir/NCBI-NGS.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/NCBI-NGS.c
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-jni && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs-jni\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_String.c.o -MF CMakeFiles/ngs-jni.dir/jni_String.c.o.d -o CMakeFiles/ngs-jni.dir/jni_String.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni/jni_String.c
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_PileupEvent.c.o -MF CMakeFiles/ngs.dir/CSRA1_PileupEvent.c.o.d -o CMakeFiles/ngs.dir/CSRA1_PileupEvent.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/CSRA1_PileupEvent.c
[  1%] Building C object ngs/ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_ErrorMsg.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-py && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs-py\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs-py/CMakeFiles/ngs-py.dir/py_Manager.c.o -MF CMakeFiles/ngs-py.dir/py_Manager.c.o.d -o CMakeFiles/ngs-py.dir/py_Manager.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py/py_Manager.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-jni && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs-jni\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_Manager.c.o -MF CMakeFiles/ngs-jni.dir/jni_Manager.c.o.d -o CMakeFiles/ngs-jni.dir/jni_Manager.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni/jni_Manager.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Pileup.c.o -MF CMakeFiles/ngs.dir/CSRA1_Pileup.c.o.d -o CMakeFiles/ngs.dir/CSRA1_Pileup.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/CSRA1_Pileup.c
[  1%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReadCollection.cpp.o
[  1%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_AlignmentItf.cpp.o
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReadCollection.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/ReadCollection.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/ReadCollection.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/c++/ReadCollection.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_AlignmentItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_AlignmentItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_AlignmentItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/python/py_AlignmentItf.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-jni && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs-jni\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_ErrorMsg.c.o -MF CMakeFiles/ngs-jni.dir/jni_ErrorMsg.c.o.d -o CMakeFiles/ngs-jni.dir/jni_ErrorMsg.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni/jni_ErrorMsg.c
[  1%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ReadCollectionItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadCollectionItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_ReadCollectionItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_ReadCollectionItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/java/jni_ReadCollectionItf.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ReadCollectionItf.cpp.o -MF CMakeFiles/ngs-disp.dir/ReadCollectionItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/ReadCollectionItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/dispatch/ReadCollectionItf.cpp
[  1%] Linking C static library ../ilib/libtk-version.a
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/shared && /usr/bin/cmake -E cmake_link_script CMakeFiles/tk-version.dir/link.txt --verbose=1
[  1%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Alignment.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Alignment.c.o -MF CMakeFiles/ngs.dir/CSRA1_Alignment.c.o.d -o CMakeFiles/ngs.dir/CSRA1_Alignment.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/CSRA1_Alignment.c
/usr/bin/ar qc ../ilib/libtk-version.a "CMakeFiles/tk-version.dir/toolkit.vers.c.o"
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make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/build.make ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/depend
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[  1%] Built target tk-version
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/adapter /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/DependInfo.cmake "--color="
make  -f ngs/ngs-java/CMakeFiles/ngs-java.dir/build.make ngs/ngs-java/CMakeFiles/ngs-java.dir/depend
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-py && /usr/bin/cmake -P CMakeFiles/ngs-py.dir/cmake_clean_target.cmake
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-java.dir/DependInfo.cmake "--color="
[  1%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_AlignmentIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_AlignmentIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_AlignmentIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_AlignmentIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/python/py_AlignmentIteratorItf.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/build.make ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-java/CMakeFiles/ngs-java.dir/build.make ngs/ngs-java/CMakeFiles/ngs-java.dir/build
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-py && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-py.dir/link.txt --verbose=1
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[  1%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ReadCollectionItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ReadCollectionItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/ReadCollectionItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/ReadCollectionItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/adapter/ReadCollectionItf.cpp
[  1%] Linking C static library ../../../ilib/libngs-jni.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-jni && /usr/bin/cmake -P CMakeFiles/ngs-jni.dir/cmake_clean_target.cmake
[  1%] Building Java objects for ngs-java.jar
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java && /usr/bin/cmake -DCMAKE_JAVA_CLASS_OUTPUT_PATH=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-java.dir -DCMAKE_JAR_CLASSES_PREFIX= -P /usr/share/cmake-3.31/Modules/UseJava/ClearClassFiles.cmake --log-level STATUS
/usr/bin/ar qc ../../../ilib/libngs-py.a "CMakeFiles/ngs-py.dir/py_Manager.c.o"
/usr/bin/ranlib ../../../ilib/libngs-py.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-jni && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-jni.dir/link.txt --verbose=1
[  1%] Built target ngs-py
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java && /usr/bin/javac -classpath :/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java:/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib -d /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-java.dir -h ./jni @/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-java.dir/java_sources
make  -f ngs/ngs-java/CMakeFiles/ngs-doc_javadoc.dir/build.make ngs/ngs-java/CMakeFiles/ngs-doc_javadoc.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-doc_javadoc.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-java/CMakeFiles/ngs-doc_javadoc.dir/build.make ngs/ngs-java/CMakeFiles/ngs-doc_javadoc.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java && /usr/bin/javadoc -d /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc -sourcepath "/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java" gov.nih.nlm.ncbi.ngs ngs
/usr/bin/ar qc ../../../ilib/libngs-jni.a "CMakeFiles/ngs-jni.dir/jni_Manager.c.o" "CMakeFiles/ngs-jni.dir/jni_String.c.o" "CMakeFiles/ngs-jni.dir/jni_ErrorMsg.c.o"
/usr/bin/ranlib ../../../ilib/libngs-jni.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[  1%] Built target ngs-jni
make  -f libs/kxml/CMakeFiles/kxml.dir/build.make libs/kxml/CMakeFiles/kxml.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/kxml /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/kxml /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/kxml/CMakeFiles/kxml.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/kxml/CMakeFiles/kxml.dir/build.make libs/kxml/CMakeFiles/kxml.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[  2%] Building C object libs/kxml/CMakeFiles/kxml.dir/xml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/kxml && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/kxml\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/usr/include/libxml2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/kxml/CMakeFiles/kxml.dir/xml.c.o -MF CMakeFiles/kxml.dir/xml.c.o.d -o CMakeFiles/kxml.dir/xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/kxml/xml.c
[  2%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReferenceWindow.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReferenceWindow.c.o -MF CMakeFiles/ngs.dir/CSRA1_ReferenceWindow.c.o.d -o CMakeFiles/ngs.dir/CSRA1_ReferenceWindow.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/CSRA1_ReferenceWindow.c
[  2%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceSequence.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceSequence.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/ReferenceSequence.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/ReferenceSequence.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/c++/ReferenceSequence.cpp
[  2%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/PileupItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/PileupItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/PileupItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/PileupItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/adapter/PileupItf.cpp
[  2%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_FragmentItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_FragmentItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_FragmentItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_FragmentItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/python/py_FragmentItf.cpp
[  2%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Reference.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Reference.c.o -MF CMakeFiles/ngs.dir/CSRA1_Reference.c.o.d -o CMakeFiles/ngs.dir/CSRA1_Reference.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/CSRA1_Reference.c
[  2%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_ReferenceIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_ReferenceIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/java/jni_ReferenceIteratorItf.cpp
[  3%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ReferenceItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ReferenceItf.cpp.o -MF CMakeFiles/ngs-disp.dir/ReferenceItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/ReferenceItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/dispatch/ReferenceItf.cpp
[  3%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReadCollection.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReadCollection.c.o -MF CMakeFiles/ngs.dir/CSRA1_ReadCollection.c.o.d -o CMakeFiles/ngs.dir/CSRA1_ReadCollection.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/CSRA1_ReadCollection.c
[  3%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_FragmentIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_FragmentIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_FragmentIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_FragmentIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/python/py_FragmentIteratorItf.cpp
[  3%] Building C object libs/kxml/CMakeFiles/kxml.dir/xtoc-parsexml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/kxml && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/kxml\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/usr/include/libxml2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/kxml/CMakeFiles/kxml.dir/xtoc-parsexml.c.o -MF CMakeFiles/kxml.dir/xtoc-parsexml.c.o.d -o CMakeFiles/kxml.dir/xtoc-parsexml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/kxml/xtoc-parsexml.c
[  3%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/PileupEventItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/PileupEventItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/PileupEventItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/PileupEventItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/adapter/PileupEventItf.cpp
[  3%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Read.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Read.c.o -MF CMakeFiles/ngs.dir/CSRA1_Read.c.o.d -o CMakeFiles/ngs.dir/CSRA1_Read.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/CSRA1_Read.c
[  3%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceIterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceIterator.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/ReferenceIterator.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/ReferenceIterator.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/c++/ReferenceIterator.cpp
Loading source files for package gov.nih.nlm.ncbi.ngs...
Loading source files for package ngs...
[  3%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Reference.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Reference.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/Reference.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/Reference.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/c++/Reference.cpp
[  3%] Building C object libs/kxml/CMakeFiles/kxml.dir/xtoc.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/kxml && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/kxml\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/usr/include/libxml2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/kxml/CMakeFiles/kxml.dir/xtoc.c.o -MF CMakeFiles/kxml.dir/xtoc.c.o.d -o CMakeFiles/kxml.dir/xtoc.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/kxml/xtoc.c
[  3%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/EBI_ReferenceSequence.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/EBI_ReferenceSequence.c.o -MF CMakeFiles/ngs.dir/EBI_ReferenceSequence.c.o.d -o CMakeFiles/ngs.dir/EBI_ReferenceSequence.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/EBI_ReferenceSequence.c
[  3%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_ReferenceItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_ReferenceItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/java/jni_ReferenceItf.cpp
[  3%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_Statistics.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_Statistics.c.o -MF CMakeFiles/ngs.dir/SRA_Statistics.c.o.d -o CMakeFiles/ngs.dir/SRA_Statistics.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/SRA_Statistics.c
Constructing Javadoc information...
[  3%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_PackageItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_PackageItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_PackageItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_PackageItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/python/py_PackageItf.cpp
[  3%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_DB_ReadCollection.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_DB_ReadCollection.c.o -MF CMakeFiles/ngs.dir/SRA_DB_ReadCollection.c.o.d -o CMakeFiles/ngs.dir/SRA_DB_ReadCollection.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/SRA_DB_ReadCollection.c
[  3%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_Read.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_Read.c.o -MF CMakeFiles/ngs.dir/SRA_Read.c.o.d -o CMakeFiles/ngs.dir/SRA_Read.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/SRA_Read.c
[  4%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ReferenceItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ReferenceItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/ReferenceItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/ReferenceItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/adapter/ReferenceItf.cpp
[  5%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroup.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroup.c.o -MF CMakeFiles/ngs.dir/SRA_ReadGroup.c.o.d -o CMakeFiles/ngs.dir/SRA_ReadGroup.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/SRA_ReadGroup.c
ngs/itf/Refcount.java:57: warning: [removal] finalize() in Object has been deprecated and marked for removal
    protected void finalize ()
                   ^
[  5%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/PileupIterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/PileupIterator.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/PileupIterator.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/PileupIterator.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/c++/PileupIterator.cpp
[  5%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroupInfo.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroupInfo.c.o -MF CMakeFiles/ngs.dir/SRA_ReadGroupInfo.c.o.d -o CMakeFiles/ngs.dir/SRA_ReadGroupInfo.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/SRA_ReadGroupInfo.c
[  5%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadCollection.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadCollection.c.o -MF CMakeFiles/ngs.dir/SRA_ReadCollection.c.o.d -o CMakeFiles/ngs.dir/SRA_ReadCollection.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/SRA_ReadCollection.c
Creating destination directory: "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/"
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/kxml && /usr/bin/cmake -P CMakeFiles/kxml.dir/cmake_clean_target.cmake
[  5%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ReferenceSequenceItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ReferenceSequenceItf.cpp.o -MF CMakeFiles/ngs-disp.dir/ReferenceSequenceItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/ReferenceSequenceItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/dispatch/ReferenceSequenceItf.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/kxml && /usr/bin/cmake -E cmake_link_script CMakeFiles/kxml.dir/link.txt --verbose=1
Building index for all the packages and classes...
[  5%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceSequenceItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceSequenceItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_ReferenceSequenceItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_ReferenceSequenceItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/java/jni_ReferenceSequenceItf.cpp
Standard Doclet version 21.0.7-ea+8-Debian-1
Building tree for all the packages and classes...
/usr/bin/ar qc ../../ilib/libkxml.a CMakeFiles/kxml.dir/xml.c.o "CMakeFiles/kxml.dir/xtoc-parsexml.c.o" CMakeFiles/kxml.dir/xtoc.c.o
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[  6%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_PileupEventItf.cpp.o
[  6%] Built target kxml
make  -f libs/loader/CMakeFiles/loader.dir/build.make libs/loader/CMakeFiles/loader.dir/depend
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_PileupEventItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_PileupEventItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_PileupEventItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/python/py_PileupEventItf.cpp
[  6%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Pileup.cpp.o
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Pileup.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/Pileup.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/Pileup.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/c++/Pileup.cpp
[  6%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReferenceSequence.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReferenceSequence.c.o -MF CMakeFiles/ngs.dir/SRA_ReferenceSequence.c.o.d -o CMakeFiles/ngs.dir/SRA_ReferenceSequence.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/SRA_ReferenceSequence.c
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/Alignment.html...
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[  6%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Statistics.c.o
[  6%] Building C object libs/loader/CMakeFiles/loader.dir/progressbar.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Statistics.c.o -MF CMakeFiles/ngs.dir/NGS_Statistics.c.o.d -o CMakeFiles/ngs.dir/NGS_Statistics.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/NGS_Statistics.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/loader/CMakeFiles/loader.dir/progressbar.c.o -MF CMakeFiles/loader.dir/progressbar.c.o.d -o CMakeFiles/loader.dir/progressbar.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/loader/progressbar.c
[  6%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ReferenceSequenceItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ReferenceSequenceItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/ReferenceSequenceItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/ReferenceSequenceItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/adapter/ReferenceSequenceItf.cpp
[  6%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadCollection.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadCollection.c.o -MF CMakeFiles/ngs.dir/NGS_ReadCollection.c.o.d -o CMakeFiles/ngs.dir/NGS_ReadCollection.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/NGS_ReadCollection.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Alignment.java:140: warning: no comment
    static int all                = primaryAlignment | secondaryAlignment;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Alignment.java:176: warning: no comment
    static int clipLeft  = 0;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Alignment.java:177: warning: no comment
    static int clipRight = 1;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Alignment.java:132: warning: no comment
    static int maxMapQuality = 8;      // pass alignments with mappingQuality <= param
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Alignment.java:131: warning: no comment
    static int minMapQuality = 4;      // pass alignments with mappingQuality >= param
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Alignment.java:133: warning: no comment
    static int noWraparound = 16;      // do not include leading wrapped around alignments to circular references
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Alignment.java:130: warning: no comment
    static int passDuplicates = 2;     // either a PCR or optical duplicate
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Alignment.java:129: warning: no comment
    static int passFailed = 1;         // reads rejected due to platform/vendor quality criteria
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Alignment.java:138: warning: no comment
    static int primaryAlignment   = 1;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Alignment.java:139: warning: no comment
    static int secondaryAlignment = 2;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Alignment.java:134: warning: no comment
    static int startWithinSlice = 32;  // change slice intersection criteria so that start pos is within slice
               ^
[  6%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_PileupEvent.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_PileupEvent.c.o -MF CMakeFiles/ngs.dir/NGS_PileupEvent.c.o.d -o CMakeFiles/ngs.dir/NGS_PileupEvent.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/NGS_PileupEvent.c
[  6%] Building C object libs/loader/CMakeFiles/loader.dir/loader-file.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/loader/CMakeFiles/loader.dir/loader-file.c.o -MF CMakeFiles/loader.dir/loader-file.c.o.d -o CMakeFiles/loader.dir/loader-file.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/loader/loader-file.c
[  6%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Pileup.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Pileup.c.o -MF CMakeFiles/ngs.dir/NGS_Pileup.c.o.d -o CMakeFiles/ngs.dir/NGS_Pileup.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/NGS_Pileup.c
[  6%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/AlignmentItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/AlignmentItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/AlignmentItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/AlignmentItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/adapter/AlignmentItf.cpp
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/AlignmentIterator.html...
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/ErrorMsg.html...
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/ErrorMsg.java:38: warning: no main description
     * @return What went wrong
       ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/ErrorMsg.java:49: warning: no comment
    public ErrorMsg ()
           ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/ErrorMsg.java:53: warning: no comment
    public ErrorMsg ( String message )
           ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/ErrorMsg.java:58: warning: no comment
    public ErrorMsg ( ErrorMsg obj )
           ^
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/Fragment.html...
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/FragmentIterator.html...
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/gov/nih/nlm/ncbi/ngs/LibDependencies.html...
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/gov/nih/nlm/ncbi/ngs/LibDependencies.java:29: warning: no comment
public class LibDependencies {
       ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/gov/nih/nlm/ncbi/ngs/LibDependencies.java:34: warning: no comment
    public final static String NCBI_VDB = "ncbi-ngs";
                               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/gov/nih/nlm/ncbi/ngs/LibDependencies.java:30: warning: no comment
    public final static String NGS_SDK  = "ngs-sdk";
                               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/gov/nih/nlm/ncbi/ngs/LibDependencies.java:29: warning: use of default constructor, which does not provide a comment
public class LibDependencies {
       ^
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/gov/nih/nlm/ncbi/ngs/NGS.html...
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/gov/nih/nlm/ncbi/ngs/NGS.java:40: warning: no comment
public class NGS
       ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/gov/nih/nlm/ncbi/ngs/NGS.java:40: warning: use of default constructor, which does not provide a comment
public class NGS
       ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/gov/nih/nlm/ncbi/ngs/NGS.java:133: warning: no comment
[  6%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_PileupIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_PileupIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/java/jni_PileupIteratorItf.cpp
    public static void main(String[] args) {
                       ^
[  6%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadGroup.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadGroup.c.o -MF CMakeFiles/ngs.dir/NGS_ReadGroup.c.o.d -o CMakeFiles/ngs.dir/NGS_ReadGroup.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/NGS_ReadGroup.c
[  7%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Alignment.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Alignment.c.o -MF CMakeFiles/ngs.dir/NGS_Alignment.c.o.d -o CMakeFiles/ngs.dir/NGS_Alignment.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/NGS_Alignment.c
[  7%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Reference.c.o
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/Package.html...
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Package.java:37: warning: no main description
     * @return package version as a 1..3 part string
       ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Package.java:33: warning: use of default constructor, which does not provide a comment
public class Package
       ^
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Reference.c.o -MF CMakeFiles/ngs.dir/NGS_Reference.c.o.d -o CMakeFiles/ngs.dir/NGS_Reference.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/NGS_Reference.c
[  8%] Building C object libs/loader/CMakeFiles/loader.dir/loader-meta.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/loader/CMakeFiles/loader.dir/loader-meta.c.o -MF CMakeFiles/loader.dir/loader-meta.c.o.d -o CMakeFiles/loader.dir/loader-meta.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/loader/loader-meta.c
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/Pileup.html...
[  8%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEventIterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEventIterator.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/PileupEventIterator.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/PileupEventIterator.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/c++/PileupEventIterator.cpp
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Pileup.java:58: warning: no main description
[  8%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_PileupEventIteratorItf.cpp.o
     * @return base at current Reference position
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_PileupEventIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_PileupEventIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_PileupEventIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/python/py_PileupEventIteratorItf.cpp
       ^
[  8%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_PileupItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_PileupItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/java/jni_PileupItf.cpp
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/PileupEvent.html...
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/PileupEvent.java:118: warning: no comment
    static int alignment_minus_strand    = 0x20;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/PileupEvent.java:116: warning: no comment
    static int alignment_start           = 0x80;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/PileupEvent.java:117: warning: no comment
    static int alignment_stop            = 0x40;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/PileupEvent.java:98: warning: no comment
    static int deletion                  = 2;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/PileupEvent.java:104: warning: no comment
    static int insertion                 = 0x08;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/PileupEvent.java:112: warning: no comment
    static int insertion_before_deletion = insertion | deletion;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/PileupEvent.java:107: warning: no comment
    static int insertion_before_match    = insertion | match;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/PileupEvent.java:108: warning: no comment
    static int insertion_before_mismatch = insertion | mismatch;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/PileupEvent.java:180: warning: no comment
    static int intron_minus              = 2;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/PileupEvent.java:179: warning: no comment
    static int intron_plus               = 1;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/PileupEvent.java:181: warning: no comment
    static int intron_unknown            = 3;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/PileupEvent.java:97: warning: no comment
    static int mismatch                  = 1;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/PileupEvent.java:191: warning: no comment
    static int read_gap                  = 5;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/PileupEvent.java:186: warning: no comment
    static int read_overlap              = 4;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/PileupEvent.java:113: warning: no comment
    static int replacement               = insertion_before_deletion;
               ^
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/PileupEventIterator.html...
[  8%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/PileupItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/PileupItf.cpp.o -MF CMakeFiles/ngs-disp.dir/PileupItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/PileupItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/dispatch/PileupItf.cpp
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/PileupIterator.html...
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/Read.html...
[  8%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/PileupEventItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/PileupEventItf.cpp.o -MF CMakeFiles/ngs-disp.dir/PileupEventItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/PileupEventItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/dispatch/PileupEventItf.cpp
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Read.java:35: warning: no comment
public interface Read
       ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Read.java:79: warning: no comment
    static int aligned          = fullyAligned | partiallyAligned;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Read.java:81: warning: no comment
    static int all              = aligned | unaligned;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Read.java:78: warning: no comment
    static int partiallyAligned = 2;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Read.java:80: warning: no comment
    static int unaligned        = 4;
               ^
[  8%] Building C object libs/loader/CMakeFiles/loader.dir/queue-file.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/loader/CMakeFiles/loader.dir/queue-file.c.o -MF CMakeFiles/loader.dir/queue-file.c.o.d -o CMakeFiles/loader.dir/queue-file.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/loader/queue-file.c
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/ReadCollection.html...
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/ReadCollection.java:88: warning: no main description
     * @param spec the name of a contained read group    
       ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/ReadCollection.java:121: warning: no main description
     * @param spec the name of a contained Reference
       ^
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
1 warning
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/ReadGroup.html...
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/ReadGroupIterator.html...
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/ReadIterator.html...
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java && /usr/bin/cmake -E touch /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-java.dir/java_compiled_ngs-java
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/ReadIterator.java:34: warning: no comment
public interface ReadIterator
       ^
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/Reference.html...
[  8%] Generating CMakeFiles/ngs-java.dir/java_class_filelist
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java && /usr/bin/cmake -DCMAKE_JAVA_CLASS_OUTPUT_PATH=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-java.dir -DCMAKE_JAR_CLASSES_PREFIX= -P /usr/share/cmake-3.31/Modules/UseJava/ClassFilelist.cmake
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/ReferenceIterator.html...
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/ReferenceSequence.html...
[  8%] Building C object libs/loader/CMakeFiles/loader.dir/alignment-writer.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/loader/CMakeFiles/loader.dir/alignment-writer.c.o -MF CMakeFiles/loader.dir/alignment-writer.c.o.d -o CMakeFiles/loader.dir/alignment-writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/loader/alignment-writer.c
[  9%] Creating Java archive ngs-java.jar
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/Statistics.html...
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-java.dir && /usr/bin/jar -cf /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib/ngs-java.jar @java_class_filelist
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Statistics.java:41: warning: no comment
    static int int64 = 2;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Statistics.java:43: warning: no comment
    static int real = 4;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Statistics.java:40: warning: no comment
    static int string = 1;
               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/ngs/Statistics.java:42: warning: no comment
    static int uint64 = 3;
               ^
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/gov/nih/nlm/ncbi/ngs/package-summary.html...
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/gov/nih/nlm/ncbi/ngs/package-tree.html...
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/package-summary.html...
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/ngs/package-tree.html...
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/constant-values.html...
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/serialized-form.html...
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/overview-tree.html...
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/index.html...
Building index for all classes...
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/allclasses-index.html...
[  9%] Building C object libs/loader/CMakeFiles/loader.dir/common-reader.c.o
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/allpackages-index.html...
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/loader/CMakeFiles/loader.dir/common-reader.c.o -MF CMakeFiles/loader.dir/common-reader.c.o.d -o CMakeFiles/loader.dir/common-reader.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/loader/common-reader.c
[ 10%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEvent.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEvent.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/PileupEvent.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/PileupEvent.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/c++/PileupEvent.cpp
[ 10%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupEventIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupEventIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_PileupEventIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_PileupEventIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/java/jni_PileupEventIteratorItf.cpp
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/index-all.html...
[ 10%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_PileupItf.cpp.o
[ 10%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ReadGroupItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ReadGroupItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/ReadGroupItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/ReadGroupItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/adapter/ReadGroupItf.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_PileupItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_PileupItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_PileupItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/python/py_PileupItf.cpp
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/search.html...
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/overview-summary.html...
Generating /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc/help-doc.html...
52 warnings
[ 10%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceSequence.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceSequence.c.o -MF CMakeFiles/ngs.dir/NGS_ReferenceSequence.c.o.d -o CMakeFiles/ngs.dir/NGS_ReferenceSequence.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/NGS_ReferenceSequence.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 10%] Built target ngs-doc_javadoc
make  -f libs/vdb-sqlite/CMakeFiles/vdb-sqlite.dir/build.make libs/vdb-sqlite/CMakeFiles/vdb-sqlite.dir/depend
[ 10%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Read.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Read.c.o -MF CMakeFiles/ngs.dir/NGS_Read.c.o.d -o CMakeFiles/ngs.dir/NGS_Read.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/NGS_Read.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 10%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/AlignmentItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/vdb-sqlite /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/vdb-sqlite /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/vdb-sqlite/CMakeFiles/vdb-sqlite.dir/DependInfo.cmake "--color="
[ 10%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ReadGroupItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/AlignmentItf.cpp.o -MF CMakeFiles/ngs-disp.dir/AlignmentItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/AlignmentItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/dispatch/AlignmentItf.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ReadGroupItf.cpp.o -MF CMakeFiles/ngs-disp.dir/ReadGroupItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/ReadGroupItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/dispatch/ReadGroupItf.cpp
[ 10%] Building C object libs/loader/CMakeFiles/loader.dir/common-writer.c.o
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/vdb-sqlite/CMakeFiles/vdb-sqlite.dir/build.make libs/vdb-sqlite/CMakeFiles/vdb-sqlite.dir/build
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/loader/CMakeFiles/loader.dir/common-writer.c.o -MF CMakeFiles/loader.dir/common-writer.c.o.d -o CMakeFiles/loader.dir/common-writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/loader/common-writer.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-java.dir && /usr/bin/cmake -D_JAVA_TARGET_DIR=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib -D_JAVA_TARGET_OUTPUT_NAME=ngs-java.jar -D_JAVA_TARGET_OUTPUT_LINK= -P /usr/share/cmake-3.31/Modules/UseJava/Symlinks.cmake
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 10%] Building C object libs/vdb-sqlite/CMakeFiles/vdb-sqlite.dir/sqlite3.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/vdb-sqlite && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/vdb-sqlite\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/vdb-sqlite/CMakeFiles/vdb-sqlite.dir/sqlite3.c.o -MF CMakeFiles/vdb-sqlite.dir/sqlite3.c.o.d -o CMakeFiles/vdb-sqlite.dir/sqlite3.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/vdb-sqlite/sqlite3.c
[ 11%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupEventItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupEventItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_PileupEventItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_PileupEventItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/java/jni_PileupEventItf.cpp
[ 11%] Built target ngs-java
[ 11%] Building C object libs/vdb-sqlite/CMakeFiles/vdb-sqlite.dir/sqlite3vdb.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/vdb-sqlite && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/vdb-sqlite\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/vdb-sqlite/CMakeFiles/vdb-sqlite.dir/sqlite3vdb.c.o -MF CMakeFiles/vdb-sqlite.dir/sqlite3vdb.c.o.d -o CMakeFiles/vdb-sqlite.dir/sqlite3vdb.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/vdb-sqlite/sqlite3vdb.c
[ 11%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Fragment.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Fragment.c.o -MF CMakeFiles/ngs.dir/NGS_Fragment.c.o.d -o CMakeFiles/ngs.dir/NGS_Fragment.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/NGS_Fragment.c
[ 11%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_AlignmentIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_AlignmentIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_AlignmentIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_AlignmentIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/java/jni_AlignmentIteratorItf.cpp
[ 11%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ReadItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ReadItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/ReadItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/ReadItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/adapter/ReadItf.cpp
[ 11%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Cursor.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Cursor.c.o -MF CMakeFiles/ngs.dir/NGS_Cursor.c.o.d -o CMakeFiles/ngs.dir/NGS_Cursor.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/NGS_Cursor.c
[ 11%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Refcount.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Refcount.c.o -MF CMakeFiles/ngs.dir/NGS_Refcount.c.o.d -o CMakeFiles/ngs.dir/NGS_Refcount.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/NGS_Refcount.c
[ 11%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_PileupIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_PileupIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_PileupIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_PileupIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/python/py_PileupIteratorItf.cpp
[ 11%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ReadItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ReadItf.cpp.o -MF CMakeFiles/ngs-disp.dir/ReadItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/ReadItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/dispatch/ReadItf.cpp
[ 11%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/AlignmentIterator.cpp.o
[ 11%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_String.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/AlignmentIterator.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/AlignmentIterator.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/AlignmentIterator.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/c++/AlignmentIterator.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_String.c.o -MF CMakeFiles/ngs.dir/NGS_String.c.o.d -o CMakeFiles/ngs.dir/NGS_String.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/NGS_String.c
[ 11%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_AlignmentItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_AlignmentItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_AlignmentItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_AlignmentItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/java/jni_AlignmentItf.cpp
[ 11%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Id.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_Id.c.o -MF CMakeFiles/ngs.dir/NGS_Id.c.o.d -o CMakeFiles/ngs.dir/NGS_Id.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/NGS_Id.c
[ 11%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadGroupIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadGroupIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_ReadGroupIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_ReadGroupIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/java/jni_ReadGroupIteratorItf.cpp
[ 11%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ErrBlock.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ErrBlock.c.o -MF CMakeFiles/ngs.dir/NGS_ErrBlock.c.o.d -o CMakeFiles/ngs.dir/NGS_ErrBlock.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/NGS_ErrBlock.c
[ 12%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlob.c.o
[ 12%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/FragmentItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlob.c.o -MF CMakeFiles/ngs.dir/NGS_FragmentBlob.c.o.d -o CMakeFiles/ngs.dir/NGS_FragmentBlob.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/NGS_FragmentBlob.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/FragmentItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/FragmentItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/FragmentItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/adapter/FragmentItf.cpp
[ 12%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlobIterator.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlobIterator.c.o -MF CMakeFiles/ngs.dir/NGS_FragmentBlobIterator.c.o.d -o CMakeFiles/ngs.dir/NGS_FragmentBlobIterator.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/NGS_FragmentBlobIterator.c
[ 12%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReadCollectionItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReadCollectionItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_ReadCollectionItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_ReadCollectionItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/python/py_ReadCollectionItf.cpp
[ 12%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlob.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlob.c.o -MF CMakeFiles/ngs.dir/NGS_ReferenceBlob.c.o.d -o CMakeFiles/ngs.dir/NGS_ReferenceBlob.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/NGS_ReferenceBlob.c
[ 12%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Alignment.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Alignment.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/Alignment.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/Alignment.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/c++/Alignment.cpp
[ 12%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/FragmentItf.cpp.o
[ 12%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlobIterator.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/FragmentItf.cpp.o -MF CMakeFiles/ngs-disp.dir/FragmentItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/FragmentItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/dispatch/FragmentItf.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlobIterator.c.o -MF CMakeFiles/ngs.dir/NGS_ReferenceBlobIterator.c.o.d -o CMakeFiles/ngs.dir/NGS_ReferenceBlobIterator.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/NGS_ReferenceBlobIterator.c
[ 12%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/StatisticsItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/StatisticsItf.cpp.o -MF CMakeFiles/ngs-disp.dir/StatisticsItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/StatisticsItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/dispatch/StatisticsItf.cpp
[ 12%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadGroupItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadGroupItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_ReadGroupItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_ReadGroupItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/java/jni_ReadGroupItf.cpp
[ 12%] Building C object ngs/ncbi/ngs/CMakeFiles/ngs.dir/VByteBlob.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs/CMakeFiles/ngs.dir/VByteBlob.c.o -MF CMakeFiles/ngs.dir/VByteBlob.c.o.d -o CMakeFiles/ngs.dir/VByteBlob.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs/VByteBlob.c
[ 12%] Building C object libs/loader/CMakeFiles/loader.dir/mmarray.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/loader/CMakeFiles/loader.dir/mmarray.c.o -MF CMakeFiles/loader.dir/mmarray.c.o.d -o CMakeFiles/loader.dir/mmarray.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/loader/mmarray.c
[ 12%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/StatisticsItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/StatisticsItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/StatisticsItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/StatisticsItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/adapter/StatisticsItf.cpp
[ 12%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_ReadIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_ReadIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/java/jni_ReadIteratorItf.cpp
[ 12%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/StringItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/StringItf.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/StringItf.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/StringItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/adapter/StringItf.cpp
[ 12%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_ReadItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_ReadItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/java/jni_ReadItf.cpp
[ 12%] Building C object libs/loader/CMakeFiles/loader.dir/reference-writer.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/loader/CMakeFiles/loader.dir/reference-writer.c.o -MF CMakeFiles/loader.dir/reference-writer.c.o.d -o CMakeFiles/loader.dir/reference-writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/loader/reference-writer.c
[ 12%] Linking C static library ../../../ilib/libngs.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cmake -P CMakeFiles/ngs.dir/cmake_clean_target.cmake
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../ilib/libngs.a "CMakeFiles/ngs.dir/NCBI-NGS.c.o" CMakeFiles/ngs.dir/CSRA1_PileupEvent.c.o CMakeFiles/ngs.dir/CSRA1_Pileup.c.o CMakeFiles/ngs.dir/CSRA1_Alignment.c.o CMakeFiles/ngs.dir/CSRA1_ReferenceWindow.c.o CMakeFiles/ngs.dir/CSRA1_Reference.c.o CMakeFiles/ngs.dir/CSRA1_ReadCollection.c.o CMakeFiles/ngs.dir/CSRA1_Read.c.o CMakeFiles/ngs.dir/EBI_ReferenceSequence.c.o CMakeFiles/ngs.dir/SRA_Statistics.c.o CMakeFiles/ngs.dir/SRA_DB_ReadCollection.c.o CMakeFiles/ngs.dir/SRA_Read.c.o CMakeFiles/ngs.dir/SRA_ReadGroup.c.o CMakeFiles/ngs.dir/SRA_ReadGroupInfo.c.o CMakeFiles/ngs.dir/SRA_ReadCollection.c.o CMakeFiles/ngs.dir/SRA_ReferenceSequence.c.o CMakeFiles/ngs.dir/NGS_Statistics.c.o CMakeFiles/ngs.dir/NGS_ReadCollection.c.o CMakeFiles/ngs.dir/NGS_PileupEvent.c.o CMakeFiles/ngs.dir/NGS_Pileup.c.o CMakeFiles/ngs.dir/NGS_ReadGroup.c.o CMakeFiles/ngs.dir/NGS_Alignment.c.o CMakeFiles/ngs.dir/NGS_Reference.c.o CMakeFiles/ngs.dir/NGS_ReferenceSequence.c.o CMakeFiles/ngs.dir/NGS_Read.c.o CMakeFiles/ngs.dir/NGS_Fragment.c.o CMakeFiles/ngs.dir/NGS_Cursor.c.o CMakeFiles/ngs.dir/NGS_Refcount.c.o CMakeFiles/ngs.dir/NGS_String.c.o CMakeFiles/ngs.dir/NGS_Id.c.o CMakeFiles/ngs.dir/NGS_ErrBlock.c.o CMakeFiles/ngs.dir/NGS_FragmentBlob.c.o CMakeFiles/ngs.dir/NGS_FragmentBlobIterator.c.o CMakeFiles/ngs.dir/NGS_ReferenceBlob.c.o CMakeFiles/ngs.dir/NGS_ReferenceBlobIterator.c.o CMakeFiles/ngs.dir/VByteBlob.c.o
/usr/bin/ranlib ../../../ilib/libngs.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 12%] Built target ngs
make  -f libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/build.make libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/build.make libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 12%] Building CXX object libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/VdbReadCollection.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/VdbReadCollection.cpp.o -MF CMakeFiles/ngs-vdb.dir/VdbReadCollection.cpp.o.d -o CMakeFiles/ngs-vdb.dir/VdbReadCollection.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/VdbReadCollection.cpp
[ 13%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/PackageItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/PackageItf.cpp.o -MF CMakeFiles/ngs-disp.dir/PackageItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/PackageItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/dispatch/PackageItf.cpp
[ 13%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReadGroupItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReadGroupItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_ReadGroupItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_ReadGroupItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/python/py_ReadGroupItf.cpp
[ 13%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroupIterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroupIterator.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/ReadGroupIterator.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/ReadGroupIterator.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/c++/ReadGroupIterator.cpp
[ 13%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/StringItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/StringItf.cpp.o -MF CMakeFiles/ngs-disp.dir/StringItf.cpp.o.d -o CMakeFiles/ngs-disp.dir/StringItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/dispatch/StringItf.cpp
[ 13%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/Refcount.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/Refcount.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/Refcount.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/Refcount.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/adapter/Refcount.cpp
[ 13%] Building C object libs/loader/CMakeFiles/loader.dir/sequence-writer.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/loader/CMakeFiles/loader.dir/sequence-writer.c.o -MF CMakeFiles/loader.dir/sequence-writer.c.o.d -o CMakeFiles/loader.dir/sequence-writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/loader/sequence-writer.c
[ 13%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_FragmentItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_FragmentItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_FragmentItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_FragmentItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/java/jni_FragmentItf.cpp
[ 13%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_StatisticsItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_StatisticsItf.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_StatisticsItf.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_StatisticsItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/java/jni_StatisticsItf.cpp
[ 13%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ErrorMsg.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ErrorMsg.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/ErrorMsg.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/ErrorMsg.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/adapter/ErrorMsg.cpp
[ 13%] Linking C static library ../../ilib/libloader.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cmake -P CMakeFiles/loader.dir/cmake_clean_target.cmake
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/loader.dir/link.txt --verbose=1
[ 14%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_Package.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_Package.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_Package.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_Package.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/java/jni_Package.cpp
/usr/bin/ar qc ../../ilib/libloader.a CMakeFiles/loader.dir/progressbar.c.o "CMakeFiles/loader.dir/loader-file.c.o" "CMakeFiles/loader.dir/loader-meta.c.o" "CMakeFiles/loader.dir/queue-file.c.o" "CMakeFiles/loader.dir/alignment-writer.c.o" "CMakeFiles/loader.dir/common-reader.c.o" "CMakeFiles/loader.dir/common-writer.c.o" CMakeFiles/loader.dir/mmarray.c.o "CMakeFiles/loader.dir/reference-writer.c.o" "CMakeFiles/loader.dir/sequence-writer.c.o"
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make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 14%] Built target loader
make  -f libs/ngs-vdb/test/CMakeFiles/ngs-makedb.dir/build.make libs/ngs-vdb/test/CMakeFiles/ngs-makedb.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/ngs-makedb.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/ngs-makedb.dir/build.make libs/ngs-vdb/test/CMakeFiles/ngs-makedb.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 14%] Building CXX object libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/FragmentBlobIterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/FragmentBlobIterator.cpp.o -MF CMakeFiles/ngs-vdb.dir/FragmentBlobIterator.cpp.o.d -o CMakeFiles/ngs-vdb.dir/FragmentBlobIterator.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/FragmentBlobIterator.cpp
[ 14%] Building CXX object libs/ngs-vdb/test/CMakeFiles/ngs-makedb.dir/ngstest_makedb.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/ngs-makedb.dir/ngstest_makedb.cpp.o -MF CMakeFiles/ngs-makedb.dir/ngstest_makedb.cpp.o.d -o CMakeFiles/ngs-makedb.dir/ngstest_makedb.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest_makedb.cpp
[ 14%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/Refcount.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/Refcount.cpp.o -MF CMakeFiles/ngs-disp.dir/Refcount.cpp.o.d -o CMakeFiles/ngs-disp.dir/Refcount.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/dispatch/Refcount.cpp
[ 14%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/VTable.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/VTable.cpp.o -MF CMakeFiles/ngs-disp.dir/VTable.cpp.o.d -o CMakeFiles/ngs-disp.dir/VTable.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/dispatch/VTable.cpp
[ 15%] Building CXX object ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ErrBlock.cpp.o
[ 15%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReadGroupIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/ErrBlock.cpp.o -MF CMakeFiles/ngs-adapt-c++.dir/ErrBlock.cpp.o.d -o CMakeFiles/ngs-adapt-c++.dir/ErrBlock.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/adapter/ErrBlock.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReadGroupIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_ReadGroupIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_ReadGroupIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/python/py_ReadGroupIteratorItf.cpp
[ 15%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReadItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReadItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_ReadItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_ReadItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/python/py_ReadItf.cpp
[ 15%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_String.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_String.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_String.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_String.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/java/jni_String.cpp
[ 15%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroup.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroup.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/ReadGroup.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/ReadGroup.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/c++/ReadGroup.cpp
[ 15%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_Refcount.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_Refcount.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_Refcount.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_Refcount.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/java/jni_Refcount.cpp
[ 15%] Building CXX object ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ErrorMsg.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-jni -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/java/CMakeFiles/ngs-bind-java.dir/jni_ErrorMsg.cpp.o -MF CMakeFiles/ngs-bind-java.dir/jni_ErrorMsg.cpp.o.d -o CMakeFiles/ngs-bind-java.dir/jni_ErrorMsg.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/java/jni_ErrorMsg.cpp
[ 15%] Building CXX object libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/FragmentBlob.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/FragmentBlob.cpp.o -MF CMakeFiles/ngs-vdb.dir/FragmentBlob.cpp.o.d -o CMakeFiles/ngs-vdb.dir/FragmentBlob.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/FragmentBlob.cpp
[ 15%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReadIterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/ReadIterator.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/ReadIterator.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/ReadIterator.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/c++/ReadIterator.cpp
[ 15%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ErrBlock.cpp.o
[ 15%] Building CXX object ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ErrorMsg.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ErrorMsg.cpp.o -MF CMakeFiles/ngs-disp.dir/ErrorMsg.cpp.o.d -o CMakeFiles/ngs-disp.dir/ErrorMsg.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/dispatch/ErrorMsg.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/ErrBlock.cpp.o -MF CMakeFiles/ngs-disp.dir/ErrBlock.cpp.o.d -o CMakeFiles/ngs-disp.dir/ErrBlock.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/dispatch/ErrBlock.cpp
[ 15%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReadIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReadIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_ReadIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_ReadIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/python/py_ReadIteratorItf.cpp
[ 15%] Linking CXX static library ../../../ilib/libngs-adapt-c++.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/cmake -P CMakeFiles/ngs-adapt-c++.dir/cmake_clean_target.cmake
[ 15%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Read.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Read.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/Read.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/Read.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/c++/Read.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/adapter && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-adapt-c++.dir/link.txt --verbose=1
[ 16%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_ReferenceItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_ReferenceItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/python/py_ReferenceItf.cpp
[ 16%] Linking CXX static library ../../../../ilib/libngs-bind-java.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/cmake -P CMakeFiles/ngs-bind-java.dir/cmake_clean_target.cmake
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/java && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-bind-java.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../ilib/libngs-adapt-c++.a "CMakeFiles/ngs-adapt-c++.dir/ReadCollectionItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/PileupItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/PileupEventItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/ReferenceItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/ReferenceSequenceItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/AlignmentItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/ReadGroupItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/ReadItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/FragmentItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/StatisticsItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/StringItf.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/Refcount.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/ErrorMsg.cpp.o" "CMakeFiles/ngs-adapt-c++.dir/ErrBlock.cpp.o"
/usr/bin/ranlib ../../../ilib/libngs-adapt-c++.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 16%] Built target ngs-adapt-c++
make  -f libs/ascp/CMakeFiles/ascp.dir/build.make libs/ascp/CMakeFiles/ascp.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ascp /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ascp /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ascp/CMakeFiles/ascp.dir/DependInfo.cmake "--color="
/usr/bin/ar qc ../../../../ilib/libngs-bind-java.a "CMakeFiles/ngs-bind-java.dir/jni_ReadCollectionItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_ReferenceIteratorItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_ReferenceItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_ReferenceSequenceItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_PileupIteratorItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_PileupItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_PileupEventIteratorItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_PileupEventItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_AlignmentIteratorItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_AlignmentItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_ReadGroupIteratorItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_ReadGroupItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_ReadIteratorItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_ReadItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_FragmentItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_StatisticsItf.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_Package.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_String.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_Refcount.cpp.o" "CMakeFiles/ngs-bind-java.dir/jni_ErrorMsg.cpp.o"
/usr/bin/ranlib ../../../../ilib/libngs-bind-java.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ascp/CMakeFiles/ascp.dir/build.make libs/ascp/CMakeFiles/ascp.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 16%] Built target ngs-bind-java
make  -f libs/diagnose/CMakeFiles/diagnose.dir/build.make libs/diagnose/CMakeFiles/diagnose.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/diagnose /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/diagnose /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/diagnose/CMakeFiles/diagnose.dir/DependInfo.cmake "--color="
[ 16%] Building C object libs/ascp/CMakeFiles/ascp.dir/ascp.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ascp && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/ascp\" -Darm64 -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ascp -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/ascp/CMakeFiles/ascp.dir/ascp.c.o -MF CMakeFiles/ascp.dir/ascp.c.o.d -o CMakeFiles/ascp.dir/ascp.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ascp/ascp.c
[ 16%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/FragmentIterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/FragmentIterator.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/FragmentIterator.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/FragmentIterator.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/c++/FragmentIterator.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/diagnose/CMakeFiles/diagnose.dir/build.make libs/diagnose/CMakeFiles/diagnose.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 16%] Building C object libs/diagnose/CMakeFiles/diagnose.dir/diagnose.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/diagnose && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/ascp\" -Darm64 -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/diagnose -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/diagnose/CMakeFiles/diagnose.dir/diagnose.c.o -MF CMakeFiles/diagnose.dir/diagnose.c.o.d -o CMakeFiles/diagnose.dir/diagnose.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/diagnose/diagnose.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/FragmentBlob.cpp: In member function 'void ncbi::ngs::vdb::FragmentBlob::GetFragmentInfo(uint64_t, std::string*, uint64_t*, uint64_t*, bool*) const':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/FragmentBlob.cpp:125:24: warning: ignoring return value of 'bool std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::empty() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]', declared with attribute 'nodiscard' [-Wunused-result]
  125 |         fragId . empty ();
      |         ~~~~~~~~~~~~~~~^~
In file included from /usr/include/c++/14/string:54,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/ngs/itf/ErrorMsg.hpp:35,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/ngs/ErrorMsg.hpp:31,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/ngs-vdb/FragmentBlob.hpp:30,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/FragmentBlob.cpp:27:
/usr/include/c++/14/bits/basic_string.h:1231:7: note: declared here
 1231 |       empty() const _GLIBCXX_NOEXCEPT
      |       ^~~~~
[ 16%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceIteratorItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceIteratorItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_ReferenceIteratorItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_ReferenceIteratorItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/python/py_ReferenceIteratorItf.cpp
[ 16%] Linking CXX static library ../../../ilib/libngs-disp.a
[ 16%] Building C object libs/diagnose/CMakeFiles/diagnose.dir/endpoint.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/cmake -P CMakeFiles/ngs-disp.dir/cmake_clean_target.cmake
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/diagnose && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/ascp\" -Darm64 -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/diagnose -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/diagnose/CMakeFiles/diagnose.dir/endpoint.c.o -MF CMakeFiles/diagnose.dir/endpoint.c.o.d -o CMakeFiles/diagnose.dir/endpoint.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/diagnose/endpoint.c
[ 16%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Fragment.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Fragment.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/Fragment.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/Fragment.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/c++/Fragment.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/dispatch && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-disp.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../ilib/libngs-disp.a "CMakeFiles/ngs-disp.dir/ReadCollectionItf.cpp.o" "CMakeFiles/ngs-disp.dir/ReferenceItf.cpp.o" "CMakeFiles/ngs-disp.dir/ReferenceSequenceItf.cpp.o" "CMakeFiles/ngs-disp.dir/PileupItf.cpp.o" "CMakeFiles/ngs-disp.dir/PileupEventItf.cpp.o" "CMakeFiles/ngs-disp.dir/AlignmentItf.cpp.o" "CMakeFiles/ngs-disp.dir/ReadGroupItf.cpp.o" "CMakeFiles/ngs-disp.dir/ReadItf.cpp.o" "CMakeFiles/ngs-disp.dir/FragmentItf.cpp.o" "CMakeFiles/ngs-disp.dir/StatisticsItf.cpp.o" "CMakeFiles/ngs-disp.dir/PackageItf.cpp.o" "CMakeFiles/ngs-disp.dir/StringItf.cpp.o" "CMakeFiles/ngs-disp.dir/Refcount.cpp.o" "CMakeFiles/ngs-disp.dir/VTable.cpp.o" "CMakeFiles/ngs-disp.dir/ErrBlock.cpp.o" "CMakeFiles/ngs-disp.dir/ErrorMsg.cpp.o"
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[ 16%] Linking CXX executable ../../../test-bin/ngs-makedb
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make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 16%] Built target ngs-disp
make  -f libs/schema/CMakeFiles/sra.dir/build.make libs/schema/CMakeFiles/sra.dir/depend
[ 16%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Statistics.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/Statistics.cpp.o -MF CMakeFiles/ngs-bind-c++.dir/Statistics.cpp.o.d -o CMakeFiles/ngs-bind-c++.dir/Statistics.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/c++/Statistics.cpp
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/schema /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/schema/CMakeFiles/sra.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 16%] Building CXX object libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/VdbReference.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/VdbReference.cpp.o -MF CMakeFiles/ngs-vdb.dir/VdbReference.cpp.o.d -o CMakeFiles/ngs-vdb.dir/VdbReference.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/VdbReference.cpp
[ 16%] Building CXX object libs/schema/CMakeFiles/sra.dir/SraSchema.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/schema && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT libs/schema/CMakeFiles/sra.dir/SraSchema.cpp.o -MF CMakeFiles/sra.dir/SraSchema.cpp.o.d -o CMakeFiles/sra.dir/SraSchema.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema/SraSchema.cpp
[ 16%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceSequenceItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceSequenceItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_ReferenceSequenceItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_ReferenceSequenceItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/python/py_ReferenceSequenceItf.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/ngs-makedb.dir/link.d "CMakeFiles/ngs-makedb.dir/ngstest_makedb.cpp.o" -o ../../../test-bin/ngs-makedb  -Wl,-Bstatic -lktst -lkapp -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
[ 17%] Building C object libs/ascp/CMakeFiles/ascp.dir/unix/connect.c.o
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ascp && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/ascp\" -Darm64 -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ascp -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -Wno-unused-result -MD -MT libs/ascp/CMakeFiles/ascp.dir/unix/connect.c.o -MF CMakeFiles/ascp.dir/unix/connect.c.o.d -o CMakeFiles/ascp.dir/unix/connect.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ascp/unix/connect.c
[ 17%] Linking CXX static library ../../ilib/libsra.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/schema && /usr/bin/cmake -P CMakeFiles/sra.dir/cmake_clean_target.cmake
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[ 18%] Building CXX object ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/StringRef.cpp.o
make  -f libs/search/CMakeFiles/ksrch.dir/build.make libs/search/CMakeFiles/ksrch.dir/depend
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/schema && /usr/bin/cmake -E cmake_link_script CMakeFiles/sra.dir/link.txt --verbose=1
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/search && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/search/CMakeFiles/ksrch.dir/agrep-dp.c.o -MF CMakeFiles/ksrch.dir/agrep-dp.c.o.d -o CMakeFiles/ksrch.dir/agrep-dp.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/agrep-dp.c
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/search && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/search/CMakeFiles/ksrch.dir/agrep-myers.c.o -MF CMakeFiles/ksrch.dir/agrep-myers.c.o.d -o CMakeFiles/ksrch.dir/agrep-myers.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/agrep-myers.c
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/general-writer && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT libs/general-writer/CMakeFiles/general-writer.dir/general-writer.cpp.o -MF CMakeFiles/general-writer.dir/general-writer.cpp.o.d -o CMakeFiles/general-writer.dir/general-writer.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/general-writer/general-writer.cpp
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[ 19%] Building CXX object tools/loaders/bam-loader/CMakeFiles/bam-load.dir/bam-loader.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/bam-load.dir/bam-loader.c.o -MF CMakeFiles/bam-load.dir/bam-loader.c.o.d -o CMakeFiles/bam-load.dir/bam-loader.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/bam-loader.c
[ 19%] Building C object libs/ascp/CMakeFiles/ascp.dir/linux/ascp-path.c.o
[ 19%] Building C object tools/loaders/bam-loader/CMakeFiles/bam-load.dir/bam.c.o
[ 19%] Building CXX object libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/ReferenceBlob.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/bam-load.dir/bam.c.o -MF CMakeFiles/bam-load.dir/bam.c.o.d -o CMakeFiles/bam-load.dir/bam.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/bam.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ascp && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/ascp\" -Darm64 -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ascp -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/ascp/CMakeFiles/ascp.dir/linux/ascp-path.c.o -MF CMakeFiles/ascp.dir/linux/ascp-path.c.o.d -o CMakeFiles/ascp.dir/linux/ascp-path.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ascp/linux/ascp-path.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/ReferenceBlob.cpp.o -MF CMakeFiles/ngs-vdb.dir/ReferenceBlob.cpp.o.d -o CMakeFiles/ngs-vdb.dir/ReferenceBlob.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/ReferenceBlob.cpp
[ 19%] Building C object libs/search/CMakeFiles/ksrch.dir/agrep-myersunltd.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/search && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/search/CMakeFiles/ksrch.dir/agrep-myersunltd.c.o -MF CMakeFiles/ksrch.dir/agrep-myersunltd.c.o.d -o CMakeFiles/ksrch.dir/agrep-myersunltd.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/agrep-myersunltd.c
[ 19%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_Refcount.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_Refcount.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_Refcount.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_Refcount.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/python/py_Refcount.cpp
[ 19%] Linking CXX static library ../../../../ilib/libngs-bind-c++.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/cmake -P CMakeFiles/ngs-bind-c++.dir/cmake_clean_target.cmake
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/c++ && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-bind-c++.dir/link.txt --verbose=1
[ 19%] Linking C static library ../../ilib/libascp.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ascp && /usr/bin/cmake -P CMakeFiles/ascp.dir/cmake_clean_target.cmake
/usr/bin/ar qc ../../../../ilib/libngs-bind-c++.a "CMakeFiles/ngs-bind-c++.dir/ReadCollection.cpp.o" "CMakeFiles/ngs-bind-c++.dir/ReferenceSequence.cpp.o" "CMakeFiles/ngs-bind-c++.dir/ReferenceIterator.cpp.o" "CMakeFiles/ngs-bind-c++.dir/Reference.cpp.o" "CMakeFiles/ngs-bind-c++.dir/PileupIterator.cpp.o" "CMakeFiles/ngs-bind-c++.dir/Pileup.cpp.o" "CMakeFiles/ngs-bind-c++.dir/PileupEventIterator.cpp.o" "CMakeFiles/ngs-bind-c++.dir/PileupEvent.cpp.o" "CMakeFiles/ngs-bind-c++.dir/AlignmentIterator.cpp.o" "CMakeFiles/ngs-bind-c++.dir/Alignment.cpp.o" "CMakeFiles/ngs-bind-c++.dir/ReadGroupIterator.cpp.o" "CMakeFiles/ngs-bind-c++.dir/ReadGroup.cpp.o" "CMakeFiles/ngs-bind-c++.dir/ReadIterator.cpp.o" "CMakeFiles/ngs-bind-c++.dir/Read.cpp.o" "CMakeFiles/ngs-bind-c++.dir/FragmentIterator.cpp.o" "CMakeFiles/ngs-bind-c++.dir/Fragment.cpp.o" "CMakeFiles/ngs-bind-c++.dir/Statistics.cpp.o" "CMakeFiles/ngs-bind-c++.dir/StringRef.cpp.o"
/usr/bin/ranlib ../../../../ilib/libngs-bind-c++.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 19%] Building C object libs/search/CMakeFiles/ksrch.dir/agrep-wumanber.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ascp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ascp.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/search && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/search/CMakeFiles/ksrch.dir/agrep-wumanber.c.o -MF CMakeFiles/ksrch.dir/agrep-wumanber.c.o.d -o CMakeFiles/ksrch.dir/agrep-wumanber.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/agrep-wumanber.c
[ 19%] Built target ngs-bind-c++
make  -f tools/loaders/bam-loader/CMakeFiles/samview.dir/build.make tools/loaders/bam-loader/CMakeFiles/samview.dir/depend
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader/CMakeFiles/samview.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
/usr/bin/ar qc ../../ilib/libascp.a CMakeFiles/ascp.dir/ascp.c.o CMakeFiles/ascp.dir/unix/connect.c.o "CMakeFiles/ascp.dir/linux/ascp-path.c.o"
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[ 20%] Building C object tools/loaders/bam-loader/CMakeFiles/samview.dir/bam.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/samview.dir/bam.c.o -MF CMakeFiles/samview.dir/bam.c.o.d -o CMakeFiles/samview.dir/bam.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/bam.c
[ 20%] Built target ascp
make  -f tools/loaders/kar/CMakeFiles/kar.dir/build.make tools/loaders/kar/CMakeFiles/kar.dir/depend
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/kar /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar/CMakeFiles/kar.dir/DependInfo.cmake "--color="
[ 20%] Building CXX object ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_StringItf.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-py -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_StringItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_StringItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_StringItf.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/language/python/py_StringItf.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/kar/CMakeFiles/kar.dir/build.make tools/loaders/kar/CMakeFiles/kar.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 20%] Building C object tools/loaders/kar/CMakeFiles/kar.dir/kar-path.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/kar\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/kar/CMakeFiles/kar.dir/kar-path.c.o -MF CMakeFiles/kar.dir/kar-path.c.o.d -o CMakeFiles/kar.dir/kar-path.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/kar/kar-path.c
[ 20%] Building C object libs/search/CMakeFiles/ksrch.dir/fgrep-aho.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/search && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/search/CMakeFiles/ksrch.dir/fgrep-aho.c.o -MF CMakeFiles/ksrch.dir/fgrep-aho.c.o.d -o CMakeFiles/ksrch.dir/fgrep-aho.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/fgrep-aho.c
[ 21%] Building CXX object libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/ReferenceBlobIterator.cpp.o
[ 21%] Building C object tools/loaders/bam-loader/CMakeFiles/bam-load.dir/sam.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/bam-load.dir/sam.c.o -MF CMakeFiles/bam-load.dir/sam.c.o.d -o CMakeFiles/bam-load.dir/sam.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/sam.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/ReferenceBlobIterator.cpp.o -MF CMakeFiles/ngs-vdb.dir/ReferenceBlobIterator.cpp.o.d -o CMakeFiles/ngs-vdb.dir/ReferenceBlobIterator.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/ReferenceBlobIterator.cpp
[ 21%] Building C object tools/loaders/kar/CMakeFiles/kar.dir/kar-args.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/kar\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/kar/CMakeFiles/kar.dir/kar-args.c.o -MF CMakeFiles/kar.dir/kar-args.c.o.d -o CMakeFiles/kar.dir/kar-args.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/kar/kar-args.c
[ 21%] Building C object tools/loaders/kar/CMakeFiles/kar.dir/kar.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/kar\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/kar/CMakeFiles/kar.dir/kar.c.o -MF CMakeFiles/kar.dir/kar.c.o.d -o CMakeFiles/kar.dir/kar.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/kar/kar.c
[ 21%] Building C object libs/search/CMakeFiles/ksrch.dir/fgrep-boyermoore.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/search && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/search/CMakeFiles/ksrch.dir/fgrep-boyermoore.c.o -MF CMakeFiles/ksrch.dir/fgrep-boyermoore.c.o.d -o CMakeFiles/ksrch.dir/fgrep-boyermoore.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/fgrep-boyermoore.c
[ 21%] Building C object libs/search/CMakeFiles/ksrch.dir/fgrep-dumb.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/search && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/search/CMakeFiles/ksrch.dir/fgrep-dumb.c.o -MF CMakeFiles/ksrch.dir/fgrep-dumb.c.o.d -o CMakeFiles/ksrch.dir/fgrep-dumb.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/fgrep-dumb.c
[ 21%] Building C object libs/search/CMakeFiles/ksrch.dir/nucstrstr.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/search && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/search/CMakeFiles/ksrch.dir/nucstrstr.c.o -MF CMakeFiles/ksrch.dir/nucstrstr.c.o.d -o CMakeFiles/ksrch.dir/nucstrstr.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c
[ 21%] Linking CXX static library ../../../../ilib/libngs-bind-python.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/cmake -P CMakeFiles/ngs-bind-python.dir/cmake_clean_target.cmake
[ 21%] Building C object libs/search/CMakeFiles/ksrch.dir/search.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/search && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/search/CMakeFiles/ksrch.dir/search.c.o -MF CMakeFiles/ksrch.dir/search.c.o.d -o CMakeFiles/ksrch.dir/search.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/search.c
In function 'nss_unary_expr',
    inlined from 'nss_expr' at /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1415:13:
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1387:29: warning: array subscript 'NucStrExpr {aka NucStrstr}[0]' is partly outside array bounds of 'unsigned char[16]' [-Warray-bounds=]
 1387 |             e -> sub . type = type_EXPR;
      |             ~~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1382:25: note: object of size 16 allocated by 'malloc'
 1382 |         NucStrExpr *e = malloc ( sizeof e -> sub );
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1388:27: warning: array subscript 'NucStrExpr {aka NucStrstr}[0]' is partly outside array bounds of 'unsigned char[16]' [-Warray-bounds=]
 1388 |             e -> sub . op = op_NOT;
      |             ~~~~~~~~~~~~~~^~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1382:25: note: object of size 16 allocated by 'malloc'
 1382 |         NucStrExpr *e = malloc ( sizeof e -> sub );
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1389:29: warning: array subscript 'NucStrExpr {aka NucStrstr}[0]' is partly outside array bounds of 'unsigned char[16]' [-Warray-bounds=]
 1389 |             e -> sub . expr = NULL;
      |                             ^
[ 21%] Building CXX object libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/VdbAlignment.cpp.o
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1382:25: note: object of size 16 allocated by 'malloc'
 1382 |         NucStrExpr *e = malloc ( sizeof e -> sub );
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'nss_primary_expr',
    inlined from 'nss_unary_expr' at /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1367:16,
    inlined from 'nss_expr' at /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1415:13:
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1306:29: warning: array subscript 'NucStrExpr {aka NucStrstr}[0]' is partly outside array bounds of 'unsigned char[16]' [-Warray-bounds=]
 1306 |             e -> sub . type = type_EXPR;
      |             ~~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1301:13: note: object of size 16 allocated by 'malloc'
 1301 |         e = malloc ( sizeof e -> sub );
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1307:27: warning: array subscript 'NucStrExpr {aka NucStrstr}[0]' is partly outside array bounds of 'unsigned char[16]' [-Warray-bounds=]
 1307 |             e -> sub . op = op_HEAD;
      |             ~~~~~~~~~~~~~~^~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1301:13: note: object of size 16 allocated by 'malloc'
 1301 |         e = malloc ( sizeof e -> sub );
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1308:29: warning: array subscript 'NucStrExpr {aka NucStrstr}[0]' is partly outside array bounds of 'unsigned char[16]' [-Warray-bounds=]
 1308 |             e -> sub . expr = NULL;
      |                             ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1301:13: note: object of size 16 allocated by 'malloc'
 1301 |         e = malloc ( sizeof e -> sub );
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1321:29: warning: array subscript 'NucStrExpr {aka NucStrstr}[0]' is partly outside array bounds of 'unsigned char[16]' [-Warray-bounds=]
 1321 |             e -> sub . type = type_EXPR;
      |             ~~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1316:13: note: object of size 16 allocated by 'malloc'
 1316 |         e = malloc ( sizeof e -> sub );
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1322:27: warning: array subscript 'NucStrExpr {aka NucStrstr}[0]' is partly outside array bounds of 'unsigned char[16]' [-Warray-bounds=]
 1322 |             e -> sub . op = 0;
      |             ~~~~~~~~~~~~~~^~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1316:13: note: object of size 16 allocated by 'malloc'
 1316 |         e = malloc ( sizeof e -> sub );
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1328:31: warning: array subscript 'NucStrExpr {aka NucStrstr}[0]' is partly outside array bounds of 'unsigned char[16]' [-Warray-bounds=]
 1328 |                 if ( e -> sub . expr == NULL || p == end || * p ++ != ')' )
      |                      ~~~~~~~~~^~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1316:13: note: object of size 16 allocated by 'malloc'
 1316 |         e = malloc ( sizeof e -> sub );
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1348:33: warning: array subscript 'NucStrExpr {aka NucStrstr}[0]' is partly outside array bounds of 'unsigned char[16]' [-Warray-bounds=]
 1348 |                 e -> sub . type = type_EXPR;
      |                 ~~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1343:17: note: object of size 16 allocated by 'malloc'
 1343 |             e = malloc ( sizeof e -> sub );
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1349:31: warning: array subscript 'NucStrExpr {aka NucStrstr}[0]' is partly outside array bounds of 'unsigned char[16]' [-Warray-bounds=]
 1349 |                 e -> sub . op = op_TAIL;
      |                 ~~~~~~~~~~~~~~^~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1343:17: note: object of size 16 allocated by 'malloc'
 1343 |             e = malloc ( sizeof e -> sub );
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1350:33: warning: array subscript 'NucStrExpr {aka NucStrstr}[0]' is partly outside array bounds of 'unsigned char[16]' [-Warray-bounds=]
 1350 |                 e -> sub . expr = * expr;
      |                 ~~~~~~~~~~~~~~~~^~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1343:17: note: object of size 16 allocated by 'malloc'
 1343 |             e = malloc ( sizeof e -> sub );
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c: In function 'nss_expr':
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/VdbAlignment.cpp.o -MF CMakeFiles/ngs-vdb.dir/VdbAlignment.cpp.o.d -o CMakeFiles/ngs-vdb.dir/VdbAlignment.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/VdbAlignment.cpp
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1461:19: warning: array subscript 'NucStrExpr {aka NucStrstr}[0]' is partly outside array bounds of 'unsigned char[24]' [-Warray-bounds=]
 1461 |                 e -> boolean . type = type_OP;
      |                   ^~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1454:21: note: object of size 24 allocated by 'malloc'
 1454 |                 e = malloc ( sizeof e -> boolean );
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1462:19: warning: array subscript 'NucStrExpr {aka NucStrstr}[0]' is partly outside array bounds of 'unsigned char[24]' [-Warray-bounds=]
 1462 |                 e -> boolean . op = op;
      |                   ^~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1454:21: note: object of size 24 allocated by 'malloc'
 1454 |                 e = malloc ( sizeof e -> boolean );
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1463:19: warning: array subscript 'NucStrExpr {aka NucStrstr}[0]' is partly outside array bounds of 'unsigned char[24]' [-Warray-bounds=]
 1463 |                 e -> boolean . left = * expr;
      |                   ^~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/nucstrstr.c:1454:21: note: object of size 24 allocated by 'malloc'
 1454 |                 e = malloc ( sizeof e -> boolean );
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/language/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-bind-python.dir/link.txt --verbose=1
[ 21%] Building CXX object libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/NGS-VDB.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT libs/ngs-vdb/CMakeFiles/ngs-vdb.dir/NGS-VDB.cpp.o -MF CMakeFiles/ngs-vdb.dir/NGS-VDB.cpp.o.d -o CMakeFiles/ngs-vdb.dir/NGS-VDB.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/NGS-VDB.cpp
/usr/bin/ar qc ../../../../ilib/libngs-bind-python.a "CMakeFiles/ngs-bind-python.dir/py_AlignmentItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_AlignmentIteratorItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_FragmentItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_FragmentIteratorItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_PackageItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_PileupEventItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_PileupEventIteratorItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_PileupItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_PileupIteratorItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_ReadCollectionItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_ReadGroupItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_ReadGroupIteratorItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_ReadItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_ReadIteratorItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_ReferenceItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_ReferenceIteratorItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_ReferenceSequenceItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_StatisticsItf.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_Refcount.cpp.o" "CMakeFiles/ngs-bind-python.dir/py_StringItf.cpp.o"
/usr/bin/ranlib ../../../../ilib/libngs-bind-python.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 21%] Built target ngs-bind-python
make  -f tools/loaders/kar/CMakeFiles/kar+.dir/build.make tools/loaders/kar/CMakeFiles/kar+.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/kar /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar/CMakeFiles/kar+.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/kar/CMakeFiles/kar+.dir/build.make tools/loaders/kar/CMakeFiles/kar+.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/bam.c: In function 'BAM_FileMakeAlignment':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/bam.c:1777:14: warning: '<unknown>' may be used uninitialized [-Wmaybe-uninitialized]
 1777 |         if (!BAM_AlignmentInit(y, rsltsize, datasize, &y->extra[numExtra]))
      |              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/bam.c:1697:13: note: by argument 4 of type 'const void * const' to 'BAM_AlignmentInit' declared here
 1697 | static bool BAM_AlignmentInit(BAM_Alignment *const self, unsigned const maxsize,
      |             ^~~~~~~~~~~~~~~~~
[ 21%] Building C object tools/loaders/kar/CMakeFiles/kar+.dir/kar-path.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/kar\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/kar/CMakeFiles/kar+.dir/kar-path.c.o -MF CMakeFiles/kar+.dir/kar-path.c.o.d -o CMakeFiles/kar+.dir/kar-path.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/kar/kar-path.c
[ 21%] Building C object libs/search/CMakeFiles/ksrch.dir/sw-search.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/search && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/search/CMakeFiles/ksrch.dir/sw-search.c.o -MF CMakeFiles/ksrch.dir/sw-search.c.o.d -o CMakeFiles/ksrch.dir/sw-search.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/search/sw-search.c
[ 21%] Building C object tools/loaders/kar/CMakeFiles/kar+.dir/kar+args.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/kar\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/kar/CMakeFiles/kar+.dir/kar+args.c.o -MF CMakeFiles/kar+.dir/kar+args.c.o.d -o CMakeFiles/kar+.dir/kar+args.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/kar/kar+args.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/bam.c: In function 'BAM_FileMakeAlignment':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/bam.c:1777:14: warning: '<unknown>' may be used uninitialized [-Wmaybe-uninitialized]
 1777 |         if (!BAM_AlignmentInit(y, rsltsize, datasize, &y->extra[numExtra]))
      |              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/bam.c:1697:13: note: by argument 4 of type 'const void * const' to 'BAM_AlignmentInit' declared here
 1697 | static bool BAM_AlignmentInit(BAM_Alignment *const self, unsigned const maxsize,
      |             ^~~~~~~~~~~~~~~~~
[ 21%] Building C object tools/loaders/kar/CMakeFiles/kar+.dir/kar+print.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/kar\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/kar/CMakeFiles/kar+.dir/kar+print.c.o -MF CMakeFiles/kar+.dir/kar+print.c.o.d -o CMakeFiles/kar+.dir/kar+print.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/kar/kar+print.c
[ 21%] Building C object tools/loaders/bam-loader/CMakeFiles/bam-load.dir/alignment-writer.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/bam-load.dir/alignment-writer.c.o -MF CMakeFiles/bam-load.dir/alignment-writer.c.o.d -o CMakeFiles/bam-load.dir/alignment-writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/alignment-writer.c
[ 21%] Building C object tools/loaders/kar/CMakeFiles/kar+.dir/kar+util.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/kar\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/kar/CMakeFiles/kar+.dir/kar+util.c.o -MF CMakeFiles/kar+.dir/kar+util.c.o.d -o CMakeFiles/kar+.dir/kar+util.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/kar/kar+util.c
[ 22%] Linking C static library ../../ilib/libdiagnose.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/diagnose && /usr/bin/cmake -P CMakeFiles/diagnose.dir/cmake_clean_target.cmake
[ 22%] Linking CXX executable ../../../bin/kar
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cmake -E cmake_link_script CMakeFiles/kar.dir/link.txt --verbose=1
[ 22%] Building C object tools/loaders/kar/CMakeFiles/kar+.dir/kar+.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/kar\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/kar/CMakeFiles/kar+.dir/kar+.c.o -MF CMakeFiles/kar+.dir/kar+.c.o.d -o CMakeFiles/kar+.dir/kar+.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/kar/kar+.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/diagnose && /usr/bin/cmake -E cmake_link_script CMakeFiles/diagnose.dir/link.txt --verbose=1
[ 22%] Building C object tools/loaders/bam-loader/CMakeFiles/bam-load.dir/reference-writer.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/bam-load.dir/reference-writer.c.o -MF CMakeFiles/bam-load.dir/reference-writer.c.o.d -o CMakeFiles/bam-load.dir/reference-writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/reference-writer.c
/usr/bin/ar qc ../../ilib/libdiagnose.a CMakeFiles/diagnose.dir/diagnose.c.o CMakeFiles/diagnose.dir/endpoint.c.o
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make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 22%] Building C object tools/loaders/bam-loader/CMakeFiles/bam-load.dir/sequence-writer.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/bam-load.dir/sequence-writer.c.o -MF CMakeFiles/bam-load.dir/sequence-writer.c.o.d -o CMakeFiles/bam-load.dir/sequence-writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/sequence-writer.c
[ 22%] Built target diagnose
make  -f tools/loaders/kar/CMakeFiles/kar+meta.dir/build.make tools/loaders/kar/CMakeFiles/kar+meta.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/kar /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar/CMakeFiles/kar+meta.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/kar/CMakeFiles/kar+meta.dir/build.make tools/loaders/kar/CMakeFiles/kar+meta.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/kar.dir/link.d "CMakeFiles/kar.dir/kar-path.c.o" "CMakeFiles/kar.dir/kar-args.c.o" CMakeFiles/kar.dir/kar.c.o -o ../../../bin/kar  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f kar.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv kar kar.3.2.1
[ 22%] Building C object tools/loaders/kar/CMakeFiles/kar+meta.dir/kar+util.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/kar\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/kar/CMakeFiles/kar+meta.dir/kar+util.c.o -MF CMakeFiles/kar+meta.dir/kar+util.c.o.d -o CMakeFiles/kar+meta.dir/kar+util.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/kar/kar+util.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s kar.3.2.1 kar.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s kar.3 kar
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 22%] Built target kar
[ 22%] Linking C static library ../../ilib/libksrch.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/search && /usr/bin/cmake -P CMakeFiles/ksrch.dir/cmake_clean_target.cmake
[ 22%] Linking CXX static library ../../ilib/libngs-vdb.a
make  -f tools/loaders/sra-sort/CMakeFiles/dump-blob-boundaries.dir/build.make tools/loaders/sra-sort/CMakeFiles/dump-blob-boundaries.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort/CMakeFiles/dump-blob-boundaries.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb && /usr/bin/cmake -P CMakeFiles/ngs-vdb.dir/cmake_clean_target.cmake
[ 23%] Building CXX object tools/loaders/bam-loader/CMakeFiles/bam-load.dir/loader-imp.c.o
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/sra-sort/CMakeFiles/dump-blob-boundaries.dir/build.make tools/loaders/sra-sort/CMakeFiles/dump-blob-boundaries.dir/build
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/bam-load.dir/loader-imp.c.o -MF CMakeFiles/bam-load.dir/loader-imp.c.o.d -o CMakeFiles/bam-load.dir/loader-imp.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/loader-imp.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/search && /usr/bin/cmake -E cmake_link_script CMakeFiles/ksrch.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-vdb.dir/link.txt --verbose=1
[ 23%] Building C object tools/loaders/sra-sort/CMakeFiles/dump-blob-boundaries.dir/dump-blob-boundaries.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/dump-blob-boundaries.dir/dump-blob-boundaries.c.o -MF CMakeFiles/dump-blob-boundaries.dir/dump-blob-boundaries.c.o.d -o CMakeFiles/dump-blob-boundaries.dir/dump-blob-boundaries.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/dump-blob-boundaries.c
[ 23%] Building CXX object tools/loaders/bam-loader/CMakeFiles/bam-load.dir/mem-bank.cpp.o
make  -f tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/build.make tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/depend
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/bam-load.dir/mem-bank.cpp.o -MF CMakeFiles/bam-load.dir/mem-bank.cpp.o.d -o CMakeFiles/bam-load.dir/mem-bank.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/mem-bank.cpp
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/DependInfo.cmake "--color="
/usr/bin/ar qc ../../ilib/libngs-vdb.a "CMakeFiles/ngs-vdb.dir/VdbReadCollection.cpp.o" "CMakeFiles/ngs-vdb.dir/FragmentBlobIterator.cpp.o" "CMakeFiles/ngs-vdb.dir/FragmentBlob.cpp.o" "CMakeFiles/ngs-vdb.dir/VdbReference.cpp.o" "CMakeFiles/ngs-vdb.dir/ReferenceBlob.cpp.o" "CMakeFiles/ngs-vdb.dir/ReferenceBlobIterator.cpp.o" "CMakeFiles/ngs-vdb.dir/VdbAlignment.cpp.o" "CMakeFiles/ngs-vdb.dir/NGS-VDB.cpp.o"
/usr/bin/ranlib ../../ilib/libngs-vdb.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 23%] Building CXX object tools/loaders/bam-loader/CMakeFiles/bam-load.dir/low-match-count.cpp.o
/usr/bin/ar qc ../../ilib/libksrch.a "CMakeFiles/ksrch.dir/agrep-dp.c.o" "CMakeFiles/ksrch.dir/agrep-myers.c.o" "CMakeFiles/ksrch.dir/agrep-myersunltd.c.o" "CMakeFiles/ksrch.dir/agrep-wumanber.c.o" "CMakeFiles/ksrch.dir/fgrep-aho.c.o" "CMakeFiles/ksrch.dir/fgrep-boyermoore.c.o" "CMakeFiles/ksrch.dir/fgrep-dumb.c.o" CMakeFiles/ksrch.dir/nucstrstr.c.o CMakeFiles/ksrch.dir/search.c.o "CMakeFiles/ksrch.dir/sw-search.c.o"
/usr/bin/ranlib ../../ilib/libksrch.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/bam-load.dir/low-match-count.cpp.o -MF CMakeFiles/bam-load.dir/low-match-count.cpp.o.d -o CMakeFiles/bam-load.dir/low-match-count.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/low-match-count.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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make  -f tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/build.make tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/build
[ 23%] Built target ngs-vdb
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 23%] Built target ksrch
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/DependInfo.cmake "--color="
make  -f tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/build.make tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/DependInfo.cmake "--color="
[ 23%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/caps.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/caps.c.o -MF CMakeFiles/sra-sort.dir/caps.c.o.d -o CMakeFiles/sra-sort.dir/caps.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/caps.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/build.make tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/build
[ 23%] Building C object libs/general-writer/CMakeFiles/general-writer.dir/utf8-like-int-codec.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/general-writer && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11 -fPIC   -rdynamic -MD -MT libs/general-writer/CMakeFiles/general-writer.dir/utf8-like-int-codec.c.o -MF CMakeFiles/general-writer.dir/utf8-like-int-codec.c.o.d -o CMakeFiles/general-writer.dir/utf8-like-int-codec.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/general-writer/utf8-like-int-codec.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 23%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/caps.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/caps.c.o -MF CMakeFiles/sra-sort-cg.dir/caps.c.o.d -o CMakeFiles/sra-sort-cg.dir/caps.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/caps.c
[ 23%] Building C object tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/spot-assembler.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/spot-assembler.c.o -MF CMakeFiles/fastqloader.dir/spot-assembler.c.o.d -o CMakeFiles/fastqloader.dir/spot-assembler.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader/spot-assembler.c
[ 23%] Linking CXX executable ../../../bin/dump-blob-boundaries
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cmake -E cmake_link_script CMakeFiles/dump-blob-boundaries.dir/link.txt --verbose=1
[ 23%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/mem.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/mem.c.o -MF CMakeFiles/sra-sort.dir/mem.c.o.d -o CMakeFiles/sra-sort.dir/mem.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/mem.c
[ 23%] Building C object tools/loaders/kar/CMakeFiles/kar+meta.dir/kar+meta.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/kar\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/kar/CMakeFiles/kar+meta.dir/kar+meta.c.o -MF CMakeFiles/kar+meta.dir/kar+meta.c.o.d -o CMakeFiles/kar+meta.dir/kar+meta.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/kar/kar+meta.c
[ 23%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/mem.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/mem.c.o -MF CMakeFiles/sra-sort-cg.dir/mem.c.o.d -o CMakeFiles/sra-sort-cg.dir/mem.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/mem.c
[ 23%] Linking CXX static library ../../ilib/libgeneral-writer.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/general-writer && /usr/bin/cmake -P CMakeFiles/general-writer.dir/cmake_clean_target.cmake
[ 23%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/membank.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/membank.c.o -MF CMakeFiles/sra-sort.dir/membank.c.o.d -o CMakeFiles/sra-sort.dir/membank.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/membank.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/general-writer && /usr/bin/cmake -E cmake_link_script CMakeFiles/general-writer.dir/link.txt --verbose=1
[ 23%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/membank.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/membank.c.o -MF CMakeFiles/sra-sort-cg.dir/membank.c.o.d -o CMakeFiles/sra-sort-cg.dir/membank.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/membank.c
/usr/bin/ar qc ../../ilib/libgeneral-writer.a "CMakeFiles/general-writer.dir/general-writer.cpp.o" "CMakeFiles/general-writer.dir/utf8-like-int-codec.c.o"
/usr/bin/ranlib ../../ilib/libgeneral-writer.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/dump-blob-boundaries.dir/link.d "CMakeFiles/dump-blob-boundaries.dir/dump-blob-boundaries.c.o" -o ../../../bin/dump-blob-boundaries  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f dump-blob-boundaries.3.2.1
[ 23%] Built target general-writer
make  -f tools/loaders/sharq/CMakeFiles/sharq.py.dir/build.make tools/loaders/sharq/CMakeFiles/sharq.py.dir/depend
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv dump-blob-boundaries dump-blob-boundaries.3.2.1
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sharq /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sharq /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sharq/CMakeFiles/sharq.py.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s dump-blob-boundaries.3.2.1 dump-blob-boundaries.3
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sharq && /usr/bin/cmake -E copy /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sharq/sharq.py /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq.py
[ 23%] Built target dump-blob-boundaries
make  -f tools/loaders/sra-load/CMakeFiles/sff-load.dir/build.make tools/loaders/sra-load/CMakeFiles/sff-load.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load/CMakeFiles/sff-load.dir/DependInfo.cmake "--color="
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make  -f tools/loaders/sra-load/CMakeFiles/sff-load.dir/build.make tools/loaders/sra-load/CMakeFiles/sff-load.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 23%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/paged-membank.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/paged-membank.c.o -MF CMakeFiles/sra-sort.dir/paged-membank.c.o.d -o CMakeFiles/sra-sort.dir/paged-membank.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/paged-membank.c
[ 23%] Built target sharq.py
make  -f tools/loaders/sra-load/CMakeFiles/fastq-load.dir/build.make tools/loaders/sra-load/CMakeFiles/fastq-load.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load/CMakeFiles/fastq-load.dir/DependInfo.cmake "--color="
[ 23%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/pstring.c.o
[ 24%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/paged-membank.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/pstring.c.o -MF CMakeFiles/sff-load.dir/pstring.c.o.d -o CMakeFiles/sff-load.dir/pstring.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/pstring.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/paged-membank.c.o -MF CMakeFiles/sra-sort-cg.dir/paged-membank.c.o.d -o CMakeFiles/sra-sort-cg.dir/paged-membank.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/paged-membank.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/sra-load/CMakeFiles/fastq-load.dir/build.make tools/loaders/sra-load/CMakeFiles/fastq-load.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 24%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/pstring.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/pstring.c.o -MF CMakeFiles/fastq-load.dir/pstring.c.o.d -o CMakeFiles/fastq-load.dir/pstring.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/pstring.c
[ 25%] Linking CXX executable ../../../bin/kar+
[ 25%] Building C object tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/common-writer.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cmake -E cmake_link_script CMakeFiles/kar+.dir/link.txt --verbose=1
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/loader-imp.c:3599:44: warning: "/*" within comment [-Wcomment]
 3599 |             int const logLevel = klogWarn; /*G.assembleWithSecondary ? klogWarn : klogErr;
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/common-writer.c.o -MF CMakeFiles/fastqloader.dir/common-writer.c.o.d -o CMakeFiles/fastqloader.dir/common-writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader/common-writer.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/loader-imp.c:4332:48: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
 4332 |         rc = KLoaderMeta_Write(node, progName, __DATE__, "BAM", KAppVersion());
      |                                                ^~~~~~~~
[ 26%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/paged-mmapbank.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/paged-mmapbank.c.o -MF CMakeFiles/sra-sort.dir/paged-mmapbank.c.o.d -o CMakeFiles/sra-sort.dir/paged-mmapbank.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/paged-mmapbank.c
[ 26%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/paged-mmapbank.c.o
[ 26%] Building C object tools/loaders/bam-loader/CMakeFiles/samview.dir/sam.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/paged-mmapbank.c.o -MF CMakeFiles/sra-sort-cg.dir/paged-mmapbank.c.o.d -o CMakeFiles/sra-sort-cg.dir/paged-mmapbank.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/paged-mmapbank.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/samview.dir/sam.c.o -MF CMakeFiles/samview.dir/sam.c.o.d -o CMakeFiles/samview.dir/sam.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/sam.c
[ 26%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/common-xml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/common-xml.c.o -MF CMakeFiles/sff-load.dir/common-xml.c.o.d -o CMakeFiles/sff-load.dir/common-xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/common-xml.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/kar+.dir/link.d "CMakeFiles/kar+.dir/kar-path.c.o" CMakeFiles/kar+.dir/kar+args.c.o CMakeFiles/kar+.dir/kar+print.c.o CMakeFiles/kar+.dir/kar+util.c.o CMakeFiles/kar+.dir/kar+.c.o -o ../../../bin/kar+  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f kar+.3.2.1
[ 26%] Building C object tools/loaders/bam-loader/CMakeFiles/samview.dir/samview.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/bam-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/usr/include/ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/bam-loader/CMakeFiles/samview.dir/samview.c.o -MF CMakeFiles/samview.dir/samview.c.o.d -o CMakeFiles/samview.dir/samview.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/samview.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv kar+ kar+.3.2.1
[ 26%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/common-xml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/common-xml.c.o -MF CMakeFiles/fastq-load.dir/common-xml.c.o.d -o CMakeFiles/fastq-load.dir/common-xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/common-xml.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s kar+.3.2.1 kar+.3
[ 26%] Linking CXX executable ../../../bin/kar+meta
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s kar+.3 kar+
[ 26%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/except.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/kar && /usr/bin/cmake -E cmake_link_script CMakeFiles/kar+meta.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/except.c.o -MF CMakeFiles/sra-sort.dir/except.c.o.d -o CMakeFiles/sra-sort.dir/except.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/except.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 26%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/except.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/except.c.o -MF CMakeFiles/sra-sort-cg.dir/except.c.o.d -o CMakeFiles/sra-sort-cg.dir/except.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/except.c
[ 26%] Built target kar+
make  -f tools/loaders/sra-load/CMakeFiles/srf-load.dir/build.make tools/loaders/sra-load/CMakeFiles/srf-load.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load/CMakeFiles/srf-load.dir/DependInfo.cmake "--color="
make  -f tools/loaders/sra-load/CMakeFiles/abi-load.dir/build.make tools/loaders/sra-load/CMakeFiles/abi-load.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load/CMakeFiles/abi-load.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/sra-load/CMakeFiles/srf-load.dir/build.make tools/loaders/sra-load/CMakeFiles/srf-load.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/sra-load/CMakeFiles/abi-load.dir/build.make tools/loaders/sra-load/CMakeFiles/abi-load.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 26%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/pstring.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/pstring.c.o -MF CMakeFiles/srf-load.dir/pstring.c.o.d -o CMakeFiles/srf-load.dir/pstring.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/pstring.c
[ 26%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/idx-mapping.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/idx-mapping.c.o -MF CMakeFiles/sra-sort.dir/idx-mapping.c.o.d -o CMakeFiles/sra-sort.dir/idx-mapping.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/idx-mapping.c
[ 26%] Building C object tools/loaders/sra-load/CMakeFiles/abi-load.dir/pstring.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/abi-load.dir/pstring.c.o -MF CMakeFiles/abi-load.dir/pstring.c.o.d -o CMakeFiles/abi-load.dir/pstring.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/pstring.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/kar+meta.dir/link.d CMakeFiles/kar+meta.dir/kar+util.c.o CMakeFiles/kar+meta.dir/kar+meta.c.o -o ../../../bin/kar+meta  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f kar+meta.3.2.1
[ 26%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/idx-mapping.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/idx-mapping.c.o -MF CMakeFiles/sra-sort-cg.dir/idx-mapping.c.o.d -o CMakeFiles/sra-sort-cg.dir/idx-mapping.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/idx-mapping.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv kar+meta kar+meta.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s kar+meta.3.2.1 kar+meta.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s kar+meta.3 kar+meta
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 26%] Built target kar+meta
make  -f tools/loaders/sra-load/CMakeFiles/illumina-load.dir/build.make tools/loaders/sra-load/CMakeFiles/illumina-load.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load/CMakeFiles/illumina-load.dir/DependInfo.cmake "--color="
[ 26%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/map-file.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/map-file.c.o -MF CMakeFiles/sra-sort.dir/map-file.c.o.d -o CMakeFiles/sra-sort.dir/map-file.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/map-file.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/sra-load/CMakeFiles/illumina-load.dir/build.make tools/loaders/sra-load/CMakeFiles/illumina-load.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 26%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/col-pair.c.o
[ 26%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/common-xml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/common-xml.c.o -MF CMakeFiles/srf-load.dir/common-xml.c.o.d -o CMakeFiles/srf-load.dir/common-xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/common-xml.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/col-pair.c.o -MF CMakeFiles/sra-sort.dir/col-pair.c.o.d -o CMakeFiles/sra-sort.dir/col-pair.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/col-pair.c
[ 26%] Building C object tools/loaders/sra-load/CMakeFiles/illumina-load.dir/pstring.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/illumina-load.dir/pstring.c.o -MF CMakeFiles/illumina-load.dir/pstring.c.o.d -o CMakeFiles/illumina-load.dir/pstring.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/pstring.c
[ 26%] Building C object tools/loaders/sra-load/CMakeFiles/abi-load.dir/common-xml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/abi-load.dir/common-xml.c.o -MF CMakeFiles/abi-load.dir/common-xml.c.o.d -o CMakeFiles/abi-load.dir/common-xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/common-xml.c
[ 26%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/map-file.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/map-file.c.o -MF CMakeFiles/sra-sort-cg.dir/map-file.c.o.d -o CMakeFiles/sra-sort-cg.dir/map-file.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/map-file.c
[ 27%] Building C object tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/sequence-writer.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/sequence-writer.c.o -MF CMakeFiles/fastqloader.dir/sequence-writer.c.o.d -o CMakeFiles/fastqloader.dir/sequence-writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader/sequence-writer.c
[ 27%] Linking CXX executable ../../../bin/samview
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/samview.dir/link.txt --verbose=1
[ 28%] Building C object tools/loaders/sra-load/CMakeFiles/illumina-load.dir/common-xml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/illumina-load.dir/common-xml.c.o -MF CMakeFiles/illumina-load.dir/common-xml.c.o.d -o CMakeFiles/illumina-load.dir/common-xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/common-xml.c
[ 28%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/experiment-xml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/experiment-xml.c.o -MF CMakeFiles/sff-load.dir/experiment-xml.c.o.d -o CMakeFiles/sff-load.dir/experiment-xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/experiment-xml.c
[ 28%] Building C object tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/common-reader.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/common-reader.c.o -MF CMakeFiles/fastqloader.dir/common-reader.c.o.d -o CMakeFiles/fastqloader.dir/common-reader.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader/common-reader.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/samview.dir/link.d CMakeFiles/samview.dir/bam.c.o CMakeFiles/samview.dir/sam.c.o CMakeFiles/samview.dir/samview.c.o -o ../../../bin/samview  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto -lz
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f samview.3.2.1
[ 28%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/row-set.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/row-set.c.o -MF CMakeFiles/sra-sort.dir/row-set.c.o.d -o CMakeFiles/sra-sort.dir/row-set.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/row-set.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv samview samview.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s samview.3.2.1 samview.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s samview.3 samview
[ 28%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/simple-row-set.c.o
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/simple-row-set.c.o -MF CMakeFiles/sra-sort.dir/simple-row-set.c.o.d -o CMakeFiles/sra-sort.dir/simple-row-set.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/simple-row-set.c
[ 28%] Built target samview
make  -f tools/loaders/sra-load/CMakeFiles/helicos-load.dir/build.make tools/loaders/sra-load/CMakeFiles/helicos-load.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load/CMakeFiles/helicos-load.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/sra-load/CMakeFiles/helicos-load.dir/build.make tools/loaders/sra-load/CMakeFiles/helicos-load.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 28%] Building C object tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/fastq-reader.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/fastq-reader.c.o -MF CMakeFiles/fastqloader.dir/fastq-reader.c.o.d -o CMakeFiles/fastqloader.dir/fastq-reader.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader/fastq-reader.c
[ 28%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/experiment-xml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/experiment-xml.c.o -MF CMakeFiles/fastq-load.dir/experiment-xml.c.o.d -o CMakeFiles/fastq-load.dir/experiment-xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/experiment-xml.c
[ 28%] Building C object tools/loaders/sra-load/CMakeFiles/helicos-load.dir/pstring.c.o
[ 28%] Building C object tools/loaders/sra-load/CMakeFiles/abi-load.dir/experiment-xml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/helicos-load.dir/pstring.c.o -MF CMakeFiles/helicos-load.dir/pstring.c.o.d -o CMakeFiles/helicos-load.dir/pstring.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/pstring.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/abi-load.dir/experiment-xml.c.o -MF CMakeFiles/abi-load.dir/experiment-xml.c.o.d -o CMakeFiles/abi-load.dir/experiment-xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/experiment-xml.c
[ 28%] Building C object tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/zz_fastq-grammar.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/zz_fastq-grammar.c.o -MF CMakeFiles/fastqloader.dir/zz_fastq-grammar.c.o.d -o CMakeFiles/fastqloader.dir/zz_fastq-grammar.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader/zz_fastq-grammar.c
[ 28%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/experiment-xml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/experiment-xml.c.o -MF CMakeFiles/srf-load.dir/experiment-xml.c.o.d -o CMakeFiles/srf-load.dir/experiment-xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/experiment-xml.c
[ 28%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/mapping-row-set.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/mapping-row-set.c.o -MF CMakeFiles/sra-sort.dir/mapping-row-set.c.o.d -o CMakeFiles/sra-sort.dir/mapping-row-set.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/mapping-row-set.c
[ 28%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/col-pair.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/col-pair.c.o -MF CMakeFiles/sra-sort-cg.dir/col-pair.c.o.d -o CMakeFiles/sra-sort-cg.dir/col-pair.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/col-pair.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/vdb-sqlite/sqlite3.c: In function 'sqlite3DefaultRowEst':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/vdb-sqlite/sqlite3.c:102377:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
102377 |   if( pIdx->pPartIdxWhere!=0 ) a[0] -= 10;  assert( 10==sqlite3LogEst(2) );
       |   ^~
[ 28%] Building C object tools/loaders/sra-load/CMakeFiles/helicos-load.dir/common-xml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/helicos-load.dir/common-xml.c.o -MF CMakeFiles/helicos-load.dir/common-xml.c.o.d -o CMakeFiles/helicos-load.dir/common-xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/common-xml.c
In file included from /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/vdb-sqlite/sqlite3.c:11540:
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/vdb-sqlite/sqlite3.c:102377:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
102377 |   if( pIdx->pPartIdxWhere!=0 ) a[0] -= 10;  assert( 10==sqlite3LogEst(2) );
       |                                             ^~~~~~
[ 28%] Building C object tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/zz_fastq-lex.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -Wno-misleading-indentation -MD -MT tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/zz_fastq-lex.c.o -MF CMakeFiles/fastqloader.dir/zz_fastq-lex.c.o.d -o CMakeFiles/fastqloader.dir/zz_fastq-lex.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader/zz_fastq-lex.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/vdb-sqlite/sqlite3.c:102378:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
102378 |   if( a[0]<33 ) a[0] = 33;                  assert( 33==sqlite3LogEst(10) );
       |   ^~
[ 28%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/sorting-row-set.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/sorting-row-set.c.o -MF CMakeFiles/sra-sort.dir/sorting-row-set.c.o.d -o CMakeFiles/sra-sort.dir/sorting-row-set.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/sorting-row-set.c
[ 28%] Building C object tools/loaders/sra-load/CMakeFiles/illumina-load.dir/experiment-xml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/illumina-load.dir/experiment-xml.c.o -MF CMakeFiles/illumina-load.dir/experiment-xml.c.o.d -o CMakeFiles/illumina-load.dir/experiment-xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/experiment-xml.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/vdb-sqlite/sqlite3.c:102378:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
102378 |   if( a[0]<33 ) a[0] = 33;                  assert( 33==sqlite3LogEst(10) );
       |                                             ^~~~~~
[ 28%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/run-xml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/run-xml.c.o -MF CMakeFiles/sff-load.dir/run-xml.c.o.d -o CMakeFiles/sff-load.dir/run-xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/run-xml.c
[ 28%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/row-set.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/row-set.c.o -MF CMakeFiles/sra-sort-cg.dir/row-set.c.o.d -o CMakeFiles/sra-sort-cg.dir/row-set.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/row-set.c
[ 28%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/run-xml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/run-xml.c.o -MF CMakeFiles/srf-load.dir/run-xml.c.o.d -o CMakeFiles/srf-load.dir/run-xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/run-xml.c
[ 29%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/meta-pair.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/meta-pair.c.o -MF CMakeFiles/sra-sort.dir/meta-pair.c.o.d -o CMakeFiles/sra-sort.dir/meta-pair.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/meta-pair.c
[ 29%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/run-xml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/run-xml.c.o -MF CMakeFiles/fastq-load.dir/run-xml.c.o.d -o CMakeFiles/fastq-load.dir/run-xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/run-xml.c
[ 29%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/simple-row-set.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/simple-row-set.c.o -MF CMakeFiles/sra-sort-cg.dir/simple-row-set.c.o.d -o CMakeFiles/sra-sort-cg.dir/simple-row-set.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/simple-row-set.c
[ 29%] Building C object tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/id2name.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/fastqloader.dir/id2name.c.o -MF CMakeFiles/fastqloader.dir/id2name.c.o.d -o CMakeFiles/fastqloader.dir/id2name.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader/id2name.c
[ 30%] Building C object tools/loaders/sra-load/CMakeFiles/helicos-load.dir/experiment-xml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/helicos-load.dir/experiment-xml.c.o -MF CMakeFiles/helicos-load.dir/experiment-xml.c.o.d -o CMakeFiles/helicos-load.dir/experiment-xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/experiment-xml.c
[ 30%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/dir-pair.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/dir-pair.c.o -MF CMakeFiles/sra-sort.dir/dir-pair.c.o.d -o CMakeFiles/sra-sort.dir/dir-pair.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/dir-pair.c
[ 30%] Building C object tools/loaders/sra-load/CMakeFiles/abi-load.dir/run-xml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/abi-load.dir/run-xml.c.o -MF CMakeFiles/abi-load.dir/run-xml.c.o.d -o CMakeFiles/abi-load.dir/run-xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/run-xml.c
[ 30%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/mapping-row-set.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/mapping-row-set.c.o -MF CMakeFiles/sra-sort-cg.dir/mapping-row-set.c.o.d -o CMakeFiles/sra-sort-cg.dir/mapping-row-set.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/mapping-row-set.c
[ 30%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/sorting-row-set.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/sorting-row-set.c.o -MF CMakeFiles/sra-sort-cg.dir/sorting-row-set.c.o.d -o CMakeFiles/sra-sort-cg.dir/sorting-row-set.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/sorting-row-set.c
[ 30%] Linking C static library ../../../ilib/libfastqloader.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cmake -P CMakeFiles/fastqloader.dir/cmake_clean_target.cmake
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastqloader.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../ilib/libfastqloader.a "CMakeFiles/fastqloader.dir/spot-assembler.c.o" "CMakeFiles/fastqloader.dir/common-writer.c.o" "CMakeFiles/fastqloader.dir/sequence-writer.c.o" "CMakeFiles/fastqloader.dir/common-reader.c.o" "CMakeFiles/fastqloader.dir/fastq-reader.c.o" "CMakeFiles/fastqloader.dir/zz_fastq-grammar.c.o" "CMakeFiles/fastqloader.dir/zz_fastq-lex.c.o" CMakeFiles/fastqloader.dir/id2name.c.o
/usr/bin/ranlib ../../../ilib/libfastqloader.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 30%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/loader-file.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/loader-file.c.o -MF CMakeFiles/srf-load.dir/loader-file.c.o.d -o CMakeFiles/srf-load.dir/loader-file.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader-file.c
[ 30%] Built target fastqloader
make  -f tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/build.make tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/DependInfo.cmake "--color="
[ 30%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/loader-file.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/loader-file.c.o -MF CMakeFiles/sff-load.dir/loader-file.c.o.d -o CMakeFiles/sff-load.dir/loader-file.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader-file.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/build.make tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/build
[ 30%] Building C object tools/loaders/sra-load/CMakeFiles/illumina-load.dir/run-xml.c.o
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/illumina-load.dir/run-xml.c.o -MF CMakeFiles/illumina-load.dir/run-xml.c.o.d -o CMakeFiles/illumina-load.dir/run-xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/run-xml.c
[ 31%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/meta-pair.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/meta-pair.c.o -MF CMakeFiles/sra-sort-cg.dir/meta-pair.c.o.d -o CMakeFiles/sra-sort-cg.dir/meta-pair.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/meta-pair.c
[ 31%] Building C object tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/pstring.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/pstring.c.o -MF CMakeFiles/pacbio-loadxml.dir/pstring.c.o.d -o CMakeFiles/pacbio-loadxml.dir/pstring.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/pstring.c
[ 31%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/tbl-pair.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/tbl-pair.c.o -MF CMakeFiles/sra-sort.dir/tbl-pair.c.o.d -o CMakeFiles/sra-sort.dir/tbl-pair.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/tbl-pair.c
[ 32%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/loader-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/loader-fmt.c.o -MF CMakeFiles/srf-load.dir/loader-fmt.c.o.d -o CMakeFiles/srf-load.dir/loader-fmt.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader-fmt.c
[ 32%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/sra-writer.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -Wno-stringop-truncation -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/sra-writer.c.o -MF CMakeFiles/srf-load.dir/sra-writer.c.o.d -o CMakeFiles/srf-load.dir/sra-writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/sra-writer.c
[ 32%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/loader-file.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/loader-file.c.o -MF CMakeFiles/fastq-load.dir/loader-file.c.o.d -o CMakeFiles/fastq-load.dir/loader-file.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader-file.c
[ 33%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/loader-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/loader-fmt.c.o -MF CMakeFiles/sff-load.dir/loader-fmt.c.o.d -o CMakeFiles/sff-load.dir/loader-fmt.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader-fmt.c
[ 33%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/loader.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/loader.c.o -MF CMakeFiles/srf-load.dir/loader.c.o.d -o CMakeFiles/srf-load.dir/loader.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader.c
[ 33%] Building C object tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/common-xml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/common-xml.c.o -MF CMakeFiles/pacbio-loadxml.dir/common-xml.c.o.d -o CMakeFiles/pacbio-loadxml.dir/common-xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/common-xml.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader.c: In function 'WriteSoftwareVersionsMeta':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader.c:889:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  889 |         rc = KLoaderMeta_Write(node, argv0, __DATE__, fe_name, fe_version);
      |                                             ^~~~~~~~
[ 33%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/dir-pair.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/dir-pair.c.o -MF CMakeFiles/sra-sort-cg.dir/dir-pair.c.o.d -o CMakeFiles/sra-sort-cg.dir/dir-pair.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/dir-pair.c
[ 33%] Building C object tools/loaders/sra-load/CMakeFiles/abi-load.dir/loader-file.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/abi-load.dir/loader-file.c.o -MF CMakeFiles/abi-load.dir/loader-file.c.o.d -o CMakeFiles/abi-load.dir/loader-file.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader-file.c
[ 33%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/sra-writer.c.o
[ 33%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/loader-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -Wno-stringop-truncation -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/sra-writer.c.o -MF CMakeFiles/sff-load.dir/sra-writer.c.o.d -o CMakeFiles/sff-load.dir/sra-writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/sra-writer.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/loader-fmt.c.o -MF CMakeFiles/fastq-load.dir/loader-fmt.c.o.d -o CMakeFiles/fastq-load.dir/loader-fmt.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader-fmt.c
[ 33%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/srf.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/srf.c.o -MF CMakeFiles/srf-load.dir/srf.c.o.d -o CMakeFiles/srf-load.dir/srf.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/srf.c
[ 33%] Building C object tools/loaders/sra-load/CMakeFiles/abi-load.dir/loader-fmt.c.o
[ 33%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/sra-writer.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/abi-load.dir/loader-fmt.c.o -MF CMakeFiles/abi-load.dir/loader-fmt.c.o.d -o CMakeFiles/abi-load.dir/loader-fmt.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader-fmt.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -Wno-stringop-truncation -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/sra-writer.c.o -MF CMakeFiles/fastq-load.dir/sra-writer.c.o.d -o CMakeFiles/fastq-load.dir/sra-writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/sra-writer.c
[ 33%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/tbl-pair.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/tbl-pair.c.o -MF CMakeFiles/sra-sort-cg.dir/tbl-pair.c.o.d -o CMakeFiles/sra-sort-cg.dir/tbl-pair.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/tbl-pair.c
[ 33%] Building C object tools/loaders/sra-load/CMakeFiles/helicos-load.dir/run-xml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/helicos-load.dir/run-xml.c.o -MF CMakeFiles/helicos-load.dir/run-xml.c.o.d -o CMakeFiles/helicos-load.dir/run-xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/run-xml.c
[ 33%] Building C object tools/loaders/sra-load/CMakeFiles/illumina-load.dir/loader-file.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/illumina-load.dir/loader-file.c.o -MF CMakeFiles/illumina-load.dir/loader-file.c.o.d -o CMakeFiles/illumina-load.dir/loader-file.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader-file.c
[ 33%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/db-pair.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/db-pair.c.o -MF CMakeFiles/sra-sort.dir/db-pair.c.o.d -o CMakeFiles/sra-sort.dir/db-pair.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/db-pair.c
[ 33%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/srf-fmt.c.o
[ 33%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/loader.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/srf-fmt.c.o -MF CMakeFiles/srf-load.dir/srf-fmt.c.o.d -o CMakeFiles/srf-load.dir/srf-fmt.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/srf-fmt.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/loader.c.o -MF CMakeFiles/sff-load.dir/loader.c.o.d -o CMakeFiles/sff-load.dir/loader.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader.c
[ 33%] Building C object tools/loaders/sra-load/CMakeFiles/abi-load.dir/sra-writer.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -Wno-stringop-truncation -MD -MT tools/loaders/sra-load/CMakeFiles/abi-load.dir/sra-writer.c.o -MF CMakeFiles/abi-load.dir/sra-writer.c.o.d -o CMakeFiles/abi-load.dir/sra-writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/sra-writer.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader.c: In function 'WriteSoftwareVersionsMeta':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader.c:889:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  889 |         rc = KLoaderMeta_Write(node, argv0, __DATE__, fe_name, fe_version);
      |                                             ^~~~~~~~
[ 33%] Building C object tools/loaders/sra-load/CMakeFiles/illumina-load.dir/loader-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/illumina-load.dir/loader-fmt.c.o -MF CMakeFiles/illumina-load.dir/loader-fmt.c.o.d -o CMakeFiles/illumina-load.dir/loader-fmt.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader-fmt.c
[ 33%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/loader.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/loader.c.o -MF CMakeFiles/fastq-load.dir/loader.c.o.d -o CMakeFiles/fastq-load.dir/loader.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader.c
[ 33%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/writer-454.c.o
[ 33%] Building C object tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/experiment-xml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/writer-454.c.o -MF CMakeFiles/sff-load.dir/writer-454.c.o.d -o CMakeFiles/sff-load.dir/writer-454.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/writer-454.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/experiment-xml.c.o -MF CMakeFiles/pacbio-loadxml.dir/experiment-xml.c.o.d -o CMakeFiles/pacbio-loadxml.dir/experiment-xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/experiment-xml.c
[ 33%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/writer-illumina.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/writer-illumina.c.o -MF CMakeFiles/srf-load.dir/writer-illumina.c.o.d -o CMakeFiles/srf-load.dir/writer-illumina.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/writer-illumina.c
[ 34%] Building C object tools/loaders/sra-load/CMakeFiles/abi-load.dir/loader.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/abi-load.dir/loader.c.o -MF CMakeFiles/abi-load.dir/loader.c.o.d -o CMakeFiles/abi-load.dir/loader.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader.c
[ 34%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/db-pair.c.o
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader.c: In function 'WriteSoftwareVersionsMeta':
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/db-pair.c.o -MF CMakeFiles/sra-sort-cg.dir/db-pair.c.o.d -o CMakeFiles/sra-sort-cg.dir/db-pair.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/db-pair.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader.c:889:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  889 |         rc = KLoaderMeta_Write(node, argv0, __DATE__, fe_name, fe_version);
      |                                             ^~~~~~~~
[ 34%] Building C object tools/loaders/sra-load/CMakeFiles/helicos-load.dir/loader-file.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/helicos-load.dir/loader-file.c.o -MF CMakeFiles/helicos-load.dir/loader-file.c.o.d -o CMakeFiles/helicos-load.dir/loader-file.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader-file.c
[ 34%] Building C object tools/loaders/sra-load/CMakeFiles/illumina-load.dir/sra-writer.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -Wno-stringop-truncation -MD -MT tools/loaders/sra-load/CMakeFiles/illumina-load.dir/sra-writer.c.o -MF CMakeFiles/illumina-load.dir/sra-writer.c.o.d -o CMakeFiles/illumina-load.dir/sra-writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/sra-writer.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader.c: In function 'WriteSoftwareVersionsMeta':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader.c:889:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  889 |         rc = KLoaderMeta_Write(node, argv0, __DATE__, fe_name, fe_version);
      |                                             ^~~~~~~~
[ 34%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/glob-poslen.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/glob-poslen.c.o -MF CMakeFiles/sra-sort.dir/glob-poslen.c.o.d -o CMakeFiles/sra-sort.dir/glob-poslen.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/glob-poslen.c
[ 34%] Building C object tools/loaders/sra-load/CMakeFiles/helicos-load.dir/loader-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/helicos-load.dir/loader-fmt.c.o -MF CMakeFiles/helicos-load.dir/loader-fmt.c.o.d -o CMakeFiles/helicos-load.dir/loader-fmt.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader-fmt.c
[ 34%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/writer-ion-torrent.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/writer-ion-torrent.c.o -MF CMakeFiles/sff-load.dir/writer-ion-torrent.c.o.d -o CMakeFiles/sff-load.dir/writer-ion-torrent.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/writer-ion-torrent.c
[ 34%] Building C object tools/loaders/sra-load/CMakeFiles/helicos-load.dir/sra-writer.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -Wno-stringop-truncation -MD -MT tools/loaders/sra-load/CMakeFiles/helicos-load.dir/sra-writer.c.o -MF CMakeFiles/helicos-load.dir/sra-writer.c.o.d -o CMakeFiles/helicos-load.dir/sra-writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/sra-writer.c
[ 34%] Building C object tools/loaders/sra-load/CMakeFiles/illumina-load.dir/loader.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/illumina-load.dir/loader.c.o -MF CMakeFiles/illumina-load.dir/loader.c.o.d -o CMakeFiles/illumina-load.dir/loader.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader.c
In file included from /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/loader-imp.c:113:
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/hashing.hpp:214:7: warning: 'sha1_filter' has a base 'sha_filter<hashing::SHA1, 5>' which has internal linkage [-Wsubobject-linkage]
  214 | class sha1_filter : public sha_filter<hashing::SHA1, 5>
      |       ^~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/hashing.hpp:218:7: warning: 'sha224_filter' has a base 'sha_filter<hashing::SHA224, 7>' which has internal linkage [-Wsubobject-linkage]
  218 | class sha224_filter : public sha_filter<hashing::SHA224, 7>
      |       ^~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/hashing.hpp:222:7: warning: 'sha256_filter' has a base 'sha_filter<hashing::SHA256, 8>' which has internal linkage [-Wsubobject-linkage]
  222 | class sha256_filter : public sha_filter<hashing::SHA256, 8>
      |       ^~~~~~~~~~~~~
[ 34%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/poslen-col-pair.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/poslen-col-pair.c.o -MF CMakeFiles/sra-sort.dir/poslen-col-pair.c.o.d -o CMakeFiles/sra-sort.dir/poslen-col-pair.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/poslen-col-pair.c
[ 34%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/ztr-illumina.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/ztr-illumina.c.o -MF CMakeFiles/srf-load.dir/ztr-illumina.c.o.d -o CMakeFiles/srf-load.dir/ztr-illumina.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/ztr-illumina.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader.c: In function 'WriteSoftwareVersionsMeta':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader.c:889:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  889 |         rc = KLoaderMeta_Write(node, argv0, __DATE__, fe_name, fe_version);
      |                                             ^~~~~~~~
[ 34%] Building C object tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/run-xml.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/run-xml.c.o -MF CMakeFiles/pacbio-loadxml.dir/run-xml.c.o.d -o CMakeFiles/pacbio-loadxml.dir/run-xml.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/run-xml.c
[ 34%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/glob-poslen.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/glob-poslen.c.o -MF CMakeFiles/sra-sort-cg.dir/glob-poslen.c.o.d -o CMakeFiles/sra-sort-cg.dir/glob-poslen.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/glob-poslen.c
[ 34%] Building C object tools/loaders/sra-load/CMakeFiles/sff-load.dir/sff-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/sff-load.dir/sff-fmt.c.o -MF CMakeFiles/sff-load.dir/sff-fmt.c.o.d -o CMakeFiles/sff-load.dir/sff-fmt.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/sff-fmt.c
[ 34%] Building C object tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/loader-file.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/loader-file.c.o -MF CMakeFiles/pacbio-loadxml.dir/loader-file.c.o.d -o CMakeFiles/pacbio-loadxml.dir/loader-file.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader-file.c
[ 34%] Building C object tools/loaders/sra-load/CMakeFiles/helicos-load.dir/loader.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/helicos-load.dir/loader.c.o -MF CMakeFiles/helicos-load.dir/loader.c.o.d -o CMakeFiles/helicos-load.dir/loader.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader.c
[ 34%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/ref-alignid-col.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/ref-alignid-col.c.o -MF CMakeFiles/sra-sort.dir/ref-alignid-col.c.o.d -o CMakeFiles/sra-sort.dir/ref-alignid-col.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/ref-alignid-col.c
[ 34%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/poslen-col-pair.c.o
[ 34%] Building C object tools/loaders/sra-load/CMakeFiles/abi-load.dir/writer-absolid.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/poslen-col-pair.c.o -MF CMakeFiles/sra-sort-cg.dir/poslen-col-pair.c.o.d -o CMakeFiles/sra-sort-cg.dir/poslen-col-pair.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/poslen-col-pair.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/abi-load.dir/writer-absolid.c.o -MF CMakeFiles/abi-load.dir/writer-absolid.c.o.d -o CMakeFiles/abi-load.dir/writer-absolid.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/writer-absolid.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader.c: In function 'WriteSoftwareVersionsMeta':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader.c:889:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  889 |         rc = KLoaderMeta_Write(node, argv0, __DATE__, fe_name, fe_version);
      |                                             ^~~~~~~~
[ 34%] Building C object tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/loader-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/loader-fmt.c.o -MF CMakeFiles/pacbio-loadxml.dir/loader-fmt.c.o.d -o CMakeFiles/pacbio-loadxml.dir/loader-fmt.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader-fmt.c
[ 35%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/writer-illumina.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/writer-illumina.c.o -MF CMakeFiles/fastq-load.dir/writer-illumina.c.o.d -o CMakeFiles/fastq-load.dir/writer-illumina.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/writer-illumina.c
[ 35%] Building C object tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/sra-writer.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -Wno-stringop-truncation -MD -MT tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/sra-writer.c.o -MF CMakeFiles/pacbio-loadxml.dir/sra-writer.c.o.d -o CMakeFiles/pacbio-loadxml.dir/sra-writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/sra-writer.c
[ 35%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/buff-writer.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/buff-writer.c.o -MF CMakeFiles/sra-sort.dir/buff-writer.c.o.d -o CMakeFiles/sra-sort.dir/buff-writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/buff-writer.c
[ 35%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/ref-alignid-col.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/ref-alignid-col.c.o -MF CMakeFiles/sra-sort-cg.dir/ref-alignid-col.c.o.d -o CMakeFiles/sra-sort-cg.dir/ref-alignid-col.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/ref-alignid-col.c
[ 35%] Linking CXX executable ../../../bin/sff-load
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cmake -E cmake_link_script CMakeFiles/sff-load.dir/link.txt --verbose=1
[ 36%] Building C object tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/loader.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/loader.c.o -MF CMakeFiles/pacbio-loadxml.dir/loader.c.o.d -o CMakeFiles/pacbio-loadxml.dir/loader.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader.c
[ 36%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/srf-illumina.c.o
[ 36%] Building C object tools/loaders/sra-load/CMakeFiles/abi-load.dir/absolid-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/srf-illumina.c.o -MF CMakeFiles/srf-load.dir/srf-illumina.c.o.d -o CMakeFiles/srf-load.dir/srf-illumina.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/srf-illumina.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/abi-load.dir/absolid-fmt.c.o -MF CMakeFiles/abi-load.dir/absolid-fmt.c.o.d -o CMakeFiles/abi-load.dir/absolid-fmt.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/absolid-fmt.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader.c: In function 'WriteSoftwareVersionsMeta':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/loader.c:889:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  889 |         rc = KLoaderMeta_Write(node, argv0, __DATE__, fe_name, fe_version);
      |                                             ^~~~~~~~
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sff-load.dir/link.d "CMakeFiles/sff-load.dir/pstring.c.o" "CMakeFiles/sff-load.dir/common-xml.c.o" "CMakeFiles/sff-load.dir/experiment-xml.c.o" "CMakeFiles/sff-load.dir/run-xml.c.o" "CMakeFiles/sff-load.dir/loader-file.c.o" "CMakeFiles/sff-load.dir/loader-fmt.c.o" "CMakeFiles/sff-load.dir/sra-writer.c.o" "CMakeFiles/sff-load.dir/loader.c.o" "CMakeFiles/sff-load.dir/writer-454.c.o" "CMakeFiles/sff-load.dir/writer-ion-torrent.c.o" "CMakeFiles/sff-load.dir/sff-fmt.c.o" -o ../../../bin/sff-load  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto ../../../ilib/libkxml.a /usr/lib/aarch64-linux-gnu/libxml2.so ../../../ilib/libksrch.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f sff-load.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv sff-load sff-load.3.2.1
[ 36%] Building C object tools/loaders/sra-load/CMakeFiles/illumina-load.dir/writer-illumina.c.o
[ 36%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/writer-absolid.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/illumina-load.dir/writer-illumina.c.o -MF CMakeFiles/illumina-load.dir/writer-illumina.c.o.d -o CMakeFiles/illumina-load.dir/writer-illumina.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/writer-illumina.c
[ 36%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/buff-writer.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/writer-absolid.c.o -MF CMakeFiles/srf-load.dir/writer-absolid.c.o.d -o CMakeFiles/srf-load.dir/writer-absolid.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/writer-absolid.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sff-load.3.2.1 sff-load.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/buff-writer.c.o -MF CMakeFiles/sra-sort-cg.dir/buff-writer.c.o.d -o CMakeFiles/sra-sort-cg.dir/buff-writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/buff-writer.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sff-load.3 sff-load
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
In file included from /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/fmt.h:27,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/loader-imp.c:100:
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h: In instantiation of 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_value(T&&) [with Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; T = fmt::v9::basic_string_view<char>&]':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1777:29:   required from 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_arg(T&&) [with bool IS_PACKED = true; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; type <anonymous> = fmt::v9::detail::type::string_type; T = fmt::v9::basic_string_view<char>&; typename std::enable_if<IS_PACKED, int>::type <anonymous> = 0]'
 1777 |   return make_value<Context>(val);
      |          ~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1901:77:   required from 'constexpr fmt::v9::format_arg_store<Context, Args>::format_arg_store(T&& ...) [with T = {fmt::v9::basic_string_view<char>&, const char (&)[3]}; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; Args = {fmt::v9::basic_string_view<char>, char [3]}]'
 1899 |         data_{detail::make_arg<
      |               ~~~~~~~~~~~~~~~~~                                              
 1900 |             is_packed, Context,
      |             ~~~~~~~~~~~~~~~~~~~                                              
 1901 |             detail::mapped_type_constant<remove_cvref_t<T>, Context>::value>(
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
 1902 |             FMT_FORWARD(args))...} {
      |             ~~~~~~~~~~~~~~~~~~                                               
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1918:31:   required from 'OutputIt fmt::v9::format_to(OutputIt, format_string<T ...>, T&& ...) [with OutputIt = appender; T = {basic_string_view<char>&, const char (&)[3]}; typename std::enable_if<detail::is_output_iterator<OutputIt, char>::value, int>::type <anonymous> = 0; format_string<T ...> = basic_format_string<char, basic_string_view<char>&, const char (&)[3]>]'
 1918 |   return {FMT_FORWARD(args)...};
      |                               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/format-inl.h:65:14:   required from here
   65 |     format_to(it, FMT_STRING("{}{}"), message, SEP);
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:3235:52:   in 'constexpr' expansion of 'fmt::v9::make_format_args<>(args#0, args#1)'
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:15: warning: possibly dangling reference to a temporary [-Wdangling-reference]
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |               ^~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:46: note: the temporary was destroyed at the end of the full expression 'fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >().fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >::map<fmt::v9::basic_string_view<char> >((*(const fmt::v9::basic_string_view<char>*)(& val)))'
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
[ 36%] Built target sff-load
make  -f tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/build.make tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/DependInfo.cmake "--color="
[ 36%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/id-mapper-col.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/id-mapper-col.c.o -MF CMakeFiles/sra-sort.dir/id-mapper-col.c.o.d -o CMakeFiles/sra-sort.dir/id-mapper-col.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/id-mapper-col.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/build.make tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/build
[ 36%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/ztr-absolid.c.o
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/ztr-absolid.c.o -MF CMakeFiles/srf-load.dir/ztr-absolid.c.o.d -o CMakeFiles/srf-load.dir/ztr-absolid.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/ztr-absolid.c
[ 36%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/writer-454.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/writer-454.c.o -MF CMakeFiles/fastq-load.dir/writer-454.c.o.d -o CMakeFiles/fastq-load.dir/writer-454.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/writer-454.c
[ 36%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/hdf5/hdf5arrayfile.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -DH5_USE_110_API -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/hdf5/hdf5arrayfile.c.o -MF CMakeFiles/pacbio-load.dir/hdf5/hdf5arrayfile.c.o.d -o CMakeFiles/pacbio-load.dir/hdf5/hdf5arrayfile.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load/hdf5/hdf5arrayfile.c
[ 36%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/capture-first-half-aligned.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/capture-first-half-aligned.c.o -MF CMakeFiles/sra-sort.dir/capture-first-half-aligned.c.o.d -o CMakeFiles/sra-sort.dir/capture-first-half-aligned.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/capture-first-half-aligned.c
[ 36%] Building C object tools/loaders/sra-load/CMakeFiles/helicos-load.dir/writer-helicos.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/helicos-load.dir/writer-helicos.c.o -MF CMakeFiles/helicos-load.dir/writer-helicos.c.o.d -o CMakeFiles/helicos-load.dir/writer-helicos.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/writer-helicos.c
[ 36%] Linking CXX executable ../../../bin/abi-load
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cmake -E cmake_link_script CMakeFiles/abi-load.dir/link.txt --verbose=1
[ 36%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/id-mapper-col.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/id-mapper-col.c.o -MF CMakeFiles/sra-sort-cg.dir/id-mapper-col.c.o.d -o CMakeFiles/sra-sort-cg.dir/id-mapper-col.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/id-mapper-col.c
[ 37%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/ztr-huffman.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/ztr-huffman.c.o -MF CMakeFiles/srf-load.dir/ztr-huffman.c.o.d -o CMakeFiles/srf-load.dir/ztr-huffman.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/ztr-huffman.c
[ 38%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/run.c.o
[ 38%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/writer-ion-torrent.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/run.c.o -MF CMakeFiles/sra-sort.dir/run.c.o.d -o CMakeFiles/sra-sort.dir/run.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/run.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/writer-ion-torrent.c.o -MF CMakeFiles/fastq-load.dir/writer-ion-torrent.c.o.d -o CMakeFiles/fastq-load.dir/writer-ion-torrent.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/writer-ion-torrent.c
[ 38%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/hdf5/hdf5dir.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -DH5_USE_110_API -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/hdf5/hdf5dir.c.o -MF CMakeFiles/pacbio-load.dir/hdf5/hdf5dir.c.o.d -o CMakeFiles/pacbio-load.dir/hdf5/hdf5dir.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load/hdf5/hdf5dir.c
[ 38%] Building C object tools/loaders/sra-load/CMakeFiles/helicos-load.dir/helicos-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/helicos-load.dir/helicos-fmt.c.o -MF CMakeFiles/helicos-load.dir/helicos-fmt.c.o.d -o CMakeFiles/helicos-load.dir/helicos-fmt.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/helicos-fmt.c
[ 39%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/capture-first-half-aligned.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/capture-first-half-aligned.c.o -MF CMakeFiles/sra-sort-cg.dir/capture-first-half-aligned.c.o.d -o CMakeFiles/sra-sort-cg.dir/capture-first-half-aligned.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/capture-first-half-aligned.c
[ 39%] Building C object tools/loaders/sra-load/CMakeFiles/srf-load.dir/srf-absolid.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/srf-load.dir/srf-absolid.c.o -MF CMakeFiles/srf-load.dir/srf-absolid.c.o.d -o CMakeFiles/srf-load.dir/srf-absolid.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/srf-absolid.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/abi-load.dir/link.d "CMakeFiles/abi-load.dir/pstring.c.o" "CMakeFiles/abi-load.dir/common-xml.c.o" "CMakeFiles/abi-load.dir/experiment-xml.c.o" "CMakeFiles/abi-load.dir/run-xml.c.o" "CMakeFiles/abi-load.dir/loader-file.c.o" "CMakeFiles/abi-load.dir/loader-fmt.c.o" "CMakeFiles/abi-load.dir/sra-writer.c.o" "CMakeFiles/abi-load.dir/loader.c.o" "CMakeFiles/abi-load.dir/writer-absolid.c.o" "CMakeFiles/abi-load.dir/absolid-fmt.c.o" -o ../../../bin/abi-load  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto ../../../ilib/libkxml.a /usr/lib/aarch64-linux-gnu/libxml2.so ../../../ilib/libksrch.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f abi-load.3.2.1
[ 39%] Building C object tools/loaders/sra-load/CMakeFiles/illumina-load.dir/illumina-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/illumina-load.dir/illumina-fmt.c.o -MF CMakeFiles/illumina-load.dir/illumina-fmt.c.o.d -o CMakeFiles/illumina-load.dir/illumina-fmt.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/illumina-fmt.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv abi-load abi-load.3.2.1
[ 39%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/hdf5/hdf5file.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s abi-load.3.2.1 abi-load.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -DH5_USE_110_API -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/hdf5/hdf5file.c.o -MF CMakeFiles/pacbio-load.dir/hdf5/hdf5file.c.o.d -o CMakeFiles/pacbio-load.dir/hdf5/hdf5file.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load/hdf5/hdf5file.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s abi-load.3 abi-load
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 39%] Built target abi-load
make  -f tools/loaders/cg-load/CMakeFiles/cg-load.dir/build.make tools/loaders/cg-load/CMakeFiles/cg-load.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load/CMakeFiles/cg-load.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/cg-load/CMakeFiles/cg-load.dir/build.make tools/loaders/cg-load/CMakeFiles/cg-load.dir/build
[ 39%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/sra-sort.c.o
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/sra-sort.c.o -MF CMakeFiles/sra-sort.dir/sra-sort.c.o.d -o CMakeFiles/sra-sort.dir/sra-sort.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/sra-sort.c
[ 39%] Linking CXX executable ../../../bin/helicos-load
[ 39%] Building C object tools/loaders/sra-load/CMakeFiles/fastq-load.dir/fastq-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cmake -E cmake_link_script CMakeFiles/helicos-load.dir/link.txt --verbose=1
[ 39%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/cg-load.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/fastq-load.dir/fastq-fmt.c.o -MF CMakeFiles/fastq-load.dir/fastq-fmt.c.o.d -o CMakeFiles/fastq-load.dir/fastq-fmt.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/fastq-fmt.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/cg-load.c.o -MF CMakeFiles/cg-load.dir/cg-load.c.o.d -o CMakeFiles/cg-load.dir/cg-load.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/cg-load.c
[ 39%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/run.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/run.c.o -MF CMakeFiles/sra-sort-cg.dir/run.c.o.d -o CMakeFiles/sra-sort-cg.dir/run.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/run.c
[ 40%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-context.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -DH5_USE_110_API -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-context.c.o -MF CMakeFiles/pacbio-load.dir/pl-context.c.o.d -o CMakeFiles/pacbio-load.dir/pl-context.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load/pl-context.c
[ 40%] Building C object tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/pacbio-fmt.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/sra-load/CMakeFiles/pacbio-loadxml.dir/pacbio-fmt.c.o -MF CMakeFiles/pacbio-loadxml.dir/pacbio-fmt.c.o.d -o CMakeFiles/pacbio-loadxml.dir/pacbio-fmt.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-load/pacbio-fmt.c
[ 40%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/factory-evidence-intervals.c.o
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/cg-load.c: In function 'DB_Fini':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/cg-load.c:229:65: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  229 |                     if( (rc = KLoaderMeta_Write(node, p->argv0, __DATE__, "Complete Genomics", KAppVersion())) != 0 ) {
      |                                                                 ^~~~~~~~
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/factory-evidence-intervals.c.o -MF CMakeFiles/cg-load.dir/factory-evidence-intervals.c.o.d -o CMakeFiles/cg-load.dir/factory-evidence-intervals.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/factory-evidence-intervals.c
[ 40%] Linking CXX executable ../../../bin/srf-load
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cmake -E cmake_link_script CMakeFiles/srf-load.dir/link.txt --verbose=1
[ 40%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-tools.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -DH5_USE_110_API -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-tools.c.o -MF CMakeFiles/pacbio-load.dir/pl-tools.c.o.d -o CMakeFiles/pacbio-load.dir/pl-tools.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load/pl-tools.c
[ 40%] Linking CXX executable ../../../bin/pacbio-loadxml
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cmake -E cmake_link_script CMakeFiles/pacbio-loadxml.dir/link.txt --verbose=1
[ 40%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/sra-sort.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/sra-sort.c.o -MF CMakeFiles/sra-sort-cg.dir/sra-sort.c.o.d -o CMakeFiles/sra-sort-cg.dir/sra-sort.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/sra-sort.c
[ 41%] Linking CXX executable ../../../bin/illumina-load
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cmake -E cmake_link_script CMakeFiles/illumina-load.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/helicos-load.dir/link.d "CMakeFiles/helicos-load.dir/pstring.c.o" "CMakeFiles/helicos-load.dir/common-xml.c.o" "CMakeFiles/helicos-load.dir/experiment-xml.c.o" "CMakeFiles/helicos-load.dir/run-xml.c.o" "CMakeFiles/helicos-load.dir/loader-file.c.o" "CMakeFiles/helicos-load.dir/loader-fmt.c.o" "CMakeFiles/helicos-load.dir/sra-writer.c.o" "CMakeFiles/helicos-load.dir/loader.c.o" "CMakeFiles/helicos-load.dir/writer-helicos.c.o" "CMakeFiles/helicos-load.dir/helicos-fmt.c.o" -o ../../../bin/helicos-load  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto ../../../ilib/libkxml.a /usr/lib/aarch64-linux-gnu/libxml2.so ../../../ilib/libksrch.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f helicos-load.3.2.1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/srf-load.dir/link.d "CMakeFiles/srf-load.dir/pstring.c.o" "CMakeFiles/srf-load.dir/common-xml.c.o" "CMakeFiles/srf-load.dir/experiment-xml.c.o" "CMakeFiles/srf-load.dir/run-xml.c.o" "CMakeFiles/srf-load.dir/loader-file.c.o" "CMakeFiles/srf-load.dir/loader-fmt.c.o" "CMakeFiles/srf-load.dir/sra-writer.c.o" "CMakeFiles/srf-load.dir/loader.c.o" "CMakeFiles/srf-load.dir/srf.c.o" "CMakeFiles/srf-load.dir/srf-fmt.c.o" "CMakeFiles/srf-load.dir/writer-illumina.c.o" "CMakeFiles/srf-load.dir/ztr-illumina.c.o" "CMakeFiles/srf-load.dir/srf-illumina.c.o" "CMakeFiles/srf-load.dir/writer-absolid.c.o" "CMakeFiles/srf-load.dir/ztr-absolid.c.o" "CMakeFiles/srf-load.dir/ztr-huffman.c.o" "CMakeFiles/srf-load.dir/srf-absolid.c.o" -o ../../../bin/srf-load  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto ../../../ilib/libkxml.a /usr/lib/aarch64-linux-gnu/libxml2.so ../../../ilib/libksrch.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f srf-load.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv helicos-load helicos-load.3.2.1
[ 41%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/xcheck-ref-align.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv srf-load srf-load.3.2.1
[ 41%] Linking CXX executable ../../../bin/fastq-load
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-load && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastq-load.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/xcheck-ref-align.c.o -MF CMakeFiles/sra-sort.dir/xcheck-ref-align.c.o.d -o CMakeFiles/sra-sort.dir/xcheck-ref-align.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/xcheck-ref-align.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s srf-load.3.2.1 srf-load.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s helicos-load.3.2.1 helicos-load.3
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/pacbio-loadxml.dir/link.d "CMakeFiles/pacbio-loadxml.dir/pstring.c.o" "CMakeFiles/pacbio-loadxml.dir/common-xml.c.o" "CMakeFiles/pacbio-loadxml.dir/experiment-xml.c.o" "CMakeFiles/pacbio-loadxml.dir/run-xml.c.o" "CMakeFiles/pacbio-loadxml.dir/loader-file.c.o" "CMakeFiles/pacbio-loadxml.dir/loader-fmt.c.o" "CMakeFiles/pacbio-loadxml.dir/sra-writer.c.o" "CMakeFiles/pacbio-loadxml.dir/loader.c.o" "CMakeFiles/pacbio-loadxml.dir/pacbio-fmt.c.o" -o ../../../bin/pacbio-loadxml  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto ../../../ilib/libkxml.a /usr/lib/aarch64-linux-gnu/libxml2.so ../../../ilib/libksrch.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f pacbio-loadxml.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s srf-load.3 srf-load
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s helicos-load.3 helicos-load
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv pacbio-loadxml pacbio-loadxml.3.2.1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 41%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-zmw.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s pacbio-loadxml.3.2.1 pacbio-loadxml.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -DH5_USE_110_API -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-zmw.c.o -MF CMakeFiles/pacbio-load.dir/pl-zmw.c.o.d -o CMakeFiles/pacbio-load.dir/pl-zmw.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load/pl-zmw.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 41%] Built target srf-load
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s pacbio-loadxml.3 pacbio-loadxml
make  -f tools/loaders/general-loader/CMakeFiles/general-loader.dir/build.make tools/loaders/general-loader/CMakeFiles/general-loader.dir/depend
[ 41%] Built target helicos-load
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/CMakeFiles/general-loader.dir/DependInfo.cmake "--color="
make  -f tools/external/kdbmeta/CMakeFiles/kdbmeta.dir/build.make tools/external/kdbmeta/CMakeFiles/kdbmeta.dir/depend
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/kdbmeta /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/kdbmeta /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/kdbmeta/CMakeFiles/kdbmeta.dir/DependInfo.cmake "--color="
[ 41%] Built target pacbio-loadxml
make  -f tools/loaders/general-loader/test/CMakeFiles/makeinputs.dir/build.make tools/loaders/general-loader/test/CMakeFiles/makeinputs.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/CMakeFiles/makeinputs.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/kdbmeta/CMakeFiles/kdbmeta.dir/build.make tools/external/kdbmeta/CMakeFiles/kdbmeta.dir/build
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/general-loader/CMakeFiles/general-loader.dir/build.make tools/loaders/general-loader/CMakeFiles/general-loader.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 41%] Building C object tools/external/kdbmeta/CMakeFiles/kdbmeta.dir/kdbmeta.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/kdbmeta && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/util\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/kdbmeta/CMakeFiles/kdbmeta.dir/kdbmeta.c.o -MF CMakeFiles/kdbmeta.dir/kdbmeta.c.o.d -o CMakeFiles/kdbmeta.dir/kdbmeta.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/kdbmeta/kdbmeta.c
[ 41%] Building CXX object tools/loaders/general-loader/CMakeFiles/general-loader.dir/general-loader.cpp.o
[ 41%] Building CXX object tools/loaders/general-loader/test/CMakeFiles/makeinputs.dir/makeinputs.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/loaders/general-loader/CMakeFiles/general-loader.dir/general-loader.cpp.o -MF CMakeFiles/general-loader.dir/general-loader.cpp.o.d -o CMakeFiles/general-loader.dir/general-loader.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/general-loader.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/.. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/loaders/general-loader/test/CMakeFiles/makeinputs.dir/makeinputs.cpp.o -MF CMakeFiles/makeinputs.dir/makeinputs.cpp.o.d -o CMakeFiles/makeinputs.dir/makeinputs.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/makeinputs.cpp
[ 41%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/csra-tbl.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/csra-tbl.c.o -MF CMakeFiles/sra-sort.dir/csra-tbl.c.o.d -o CMakeFiles/sra-sort.dir/csra-tbl.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/csra-tbl.c
[ 41%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-basecalls_cmn.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -DH5_USE_110_API -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-basecalls_cmn.c.o -MF CMakeFiles/pacbio-load.dir/pl-basecalls_cmn.c.o.d -o CMakeFiles/pacbio-load.dir/pl-basecalls_cmn.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load/pl-basecalls_cmn.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/illumina-load.dir/link.d "CMakeFiles/illumina-load.dir/pstring.c.o" "CMakeFiles/illumina-load.dir/common-xml.c.o" "CMakeFiles/illumina-load.dir/experiment-xml.c.o" "CMakeFiles/illumina-load.dir/run-xml.c.o" "CMakeFiles/illumina-load.dir/loader-file.c.o" "CMakeFiles/illumina-load.dir/loader-fmt.c.o" "CMakeFiles/illumina-load.dir/sra-writer.c.o" "CMakeFiles/illumina-load.dir/loader.c.o" "CMakeFiles/illumina-load.dir/writer-illumina.c.o" "CMakeFiles/illumina-load.dir/illumina-fmt.c.o" -o ../../../bin/illumina-load  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto ../../../ilib/libkxml.a /usr/lib/aarch64-linux-gnu/libxml2.so ../../../ilib/libksrch.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f illumina-load.3.2.1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/fastq-load.dir/link.d "CMakeFiles/fastq-load.dir/pstring.c.o" "CMakeFiles/fastq-load.dir/common-xml.c.o" "CMakeFiles/fastq-load.dir/experiment-xml.c.o" "CMakeFiles/fastq-load.dir/run-xml.c.o" "CMakeFiles/fastq-load.dir/loader-file.c.o" "CMakeFiles/fastq-load.dir/loader-fmt.c.o" "CMakeFiles/fastq-load.dir/sra-writer.c.o" "CMakeFiles/fastq-load.dir/loader.c.o" "CMakeFiles/fastq-load.dir/writer-illumina.c.o" "CMakeFiles/fastq-load.dir/writer-454.c.o" "CMakeFiles/fastq-load.dir/writer-ion-torrent.c.o" "CMakeFiles/fastq-load.dir/fastq-fmt.c.o" -o ../../../bin/fastq-load  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto ../../../ilib/libkxml.a /usr/lib/aarch64-linux-gnu/libxml2.so ../../../ilib/libksrch.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv illumina-load illumina-load.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f fastq-load.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s illumina-load.3.2.1 illumina-load.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv fastq-load fastq-load.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s fastq-load.3.2.1 fastq-load.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s illumina-load.3 illumina-load
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s fastq-load.3 fastq-load
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 41%] Built target illumina-load
make  -f tools/loaders/general-loader/test/vschema/CMakeFiles/bio-end-makeinputs.dir/build.make tools/loaders/general-loader/test/vschema/CMakeFiles/bio-end-makeinputs.dir/depend
[ 41%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-sequence.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -DH5_USE_110_API -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-sequence.c.o -MF CMakeFiles/pacbio-load.dir/pl-sequence.c.o.d -o CMakeFiles/pacbio-load.dir/pl-sequence.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load/pl-sequence.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema/CMakeFiles/bio-end-makeinputs.dir/DependInfo.cmake "--color="
[ 41%] Built target fastq-load
make  -f tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-makeinputs.dir/build.make tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-makeinputs.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-makeinputs.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/general-loader/test/vschema/CMakeFiles/bio-end-makeinputs.dir/build.make tools/loaders/general-loader/test/vschema/CMakeFiles/bio-end-makeinputs.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 41%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/xcheck-ref-align.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/xcheck-ref-align.c.o -MF CMakeFiles/sra-sort-cg.dir/xcheck-ref-align.c.o.d -o CMakeFiles/sra-sort-cg.dir/xcheck-ref-align.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/xcheck-ref-align.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-makeinputs.dir/build.make tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-makeinputs.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 41%] Building CXX object tools/loaders/general-loader/test/vschema/CMakeFiles/bio-end-makeinputs.dir/bio-end/makeinputs.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/.. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/loaders/general-loader/test/vschema/CMakeFiles/bio-end-makeinputs.dir/bio-end/makeinputs.cpp.o -MF CMakeFiles/bio-end-makeinputs.dir/bio-end/makeinputs.cpp.o.d -o CMakeFiles/bio-end-makeinputs.dir/bio-end/makeinputs.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/bio-end/makeinputs.cpp
[ 41%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/factory-evidence-dnbs.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/factory-evidence-dnbs.c.o -MF CMakeFiles/cg-load.dir/factory-evidence-dnbs.c.o.d -o CMakeFiles/cg-load.dir/factory-evidence-dnbs.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/factory-evidence-dnbs.c
[ 41%] Building CXX object tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-makeinputs.dir/idx-text/makeinputs.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/.. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-makeinputs.dir/idx-text/makeinputs.cpp.o -MF CMakeFiles/idx-text-makeinputs.dir/idx-text/makeinputs.cpp.o.d -o CMakeFiles/idx-text-makeinputs.dir/idx-text/makeinputs.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/idx-text/makeinputs.cpp
[ 41%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/factory-mappings.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/factory-mappings.c.o -MF CMakeFiles/cg-load.dir/factory-mappings.c.o.d -o CMakeFiles/cg-load.dir/factory-mappings.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/factory-mappings.c
[ 41%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/csra-pair.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort.dir/csra-pair.c.o -MF CMakeFiles/sra-sort.dir/csra-pair.c.o.d -o CMakeFiles/sra-sort.dir/csra-pair.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/csra-pair.c
[ 41%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/csra-tbl.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/csra-tbl.c.o -MF CMakeFiles/sra-sort-cg.dir/csra-tbl.c.o.d -o CMakeFiles/sra-sort-cg.dir/csra-tbl.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/csra-tbl.c
[ 41%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-consensus.c.o
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/factory-mappings.c: In function 'CGMappings15_Read':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/factory-mappings.c:248:16: warning: 'tmp' may be used uninitialized [-Wmaybe-uninitialized]
  248 |         if( tmp[0] < 33 || tmp[0] > 126 ) {
      |             ~~~^~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/factory-mappings.c:225:14: note: 'tmp' declared here
  225 |         char tmp[2];
      |              ^~~
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -DH5_USE_110_API -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-consensus.c.o -MF CMakeFiles/pacbio-load.dir/pl-consensus.c.o.d -o CMakeFiles/pacbio-load.dir/pl-consensus.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load/pl-consensus.c
[ 41%] Linking CXX executable ../../../bin/sra-sort
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cmake -E cmake_link_script CMakeFiles/sra-sort.dir/link.txt --verbose=1
[ 41%] Linking CXX executable ../../../bin/kdbmeta
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/kdbmeta && /usr/bin/cmake -E cmake_link_script CMakeFiles/kdbmeta.dir/link.txt --verbose=1
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/factory-mappings.c: In function 'CGMappings22_Read':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/factory-mappings.c:311:16: warning: 'tmp' may be used uninitialized [-Wmaybe-uninitialized]
  311 |         if( tmp[0] < 33 || tmp[0] > 126 ) {
      |             ~~~^~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/factory-mappings.c:287:14: note: 'tmp' declared here
  287 |         char tmp[2];
      |              ^~~
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sra-sort.dir/link.d "CMakeFiles/sra-sort.dir/caps.c.o" "CMakeFiles/sra-sort.dir/mem.c.o" "CMakeFiles/sra-sort.dir/membank.c.o" "CMakeFiles/sra-sort.dir/paged-membank.c.o" "CMakeFiles/sra-sort.dir/paged-mmapbank.c.o" "CMakeFiles/sra-sort.dir/except.c.o" "CMakeFiles/sra-sort.dir/idx-mapping.c.o" "CMakeFiles/sra-sort.dir/map-file.c.o" "CMakeFiles/sra-sort.dir/col-pair.c.o" "CMakeFiles/sra-sort.dir/row-set.c.o" "CMakeFiles/sra-sort.dir/simple-row-set.c.o" "CMakeFiles/sra-sort.dir/mapping-row-set.c.o" "CMakeFiles/sra-sort.dir/sorting-row-set.c.o" "CMakeFiles/sra-sort.dir/meta-pair.c.o" "CMakeFiles/sra-sort.dir/dir-pair.c.o" "CMakeFiles/sra-sort.dir/tbl-pair.c.o" "CMakeFiles/sra-sort.dir/db-pair.c.o" "CMakeFiles/sra-sort.dir/glob-poslen.c.o" "CMakeFiles/sra-sort.dir/poslen-col-pair.c.o" "CMakeFiles/sra-sort.dir/ref-alignid-col.c.o" "CMakeFiles/sra-sort.dir/buff-writer.c.o" "CMakeFiles/sra-sort.dir/id-mapper-col.c.o" "CMakeFiles/sra-sort.dir/capture-first-half-aligned.c.o" "CMakeFiles/sra-sort.dir/run.c.o" "CMakeFiles/sra-sort.dir/sra-sort.c.o" "CMakeFiles/sra-sort.dir/xcheck-ref-align.c.o" "CMakeFiles/sra-sort.dir/csra-tbl.c.o" "CMakeFiles/sra-sort.dir/csra-pair.c.o" -o ../../../bin/sra-sort  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto -lbz2 -llzma
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f sra-sort.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv sra-sort sra-sort.3.2.1
[ 41%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-passes.c.o
[ 41%] Building C object tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/csra-pair.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DSEQUENCE_BEFORE_SECONDARY=0 -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-sort\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -Wno-unused-const-variable -std=c11   -rdynamic -MD -MT tools/loaders/sra-sort/CMakeFiles/sra-sort-cg.dir/csra-pair.c.o -MF CMakeFiles/sra-sort-cg.dir/csra-pair.c.o.d -o CMakeFiles/sra-sort-cg.dir/csra-pair.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sra-sort/csra-pair.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -DH5_USE_110_API -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-passes.c.o -MF CMakeFiles/pacbio-load.dir/pl-passes.c.o.d -o CMakeFiles/pacbio-load.dir/pl-passes.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load/pl-passes.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-sort.3.2.1 sra-sort.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-sort.3 sra-sort
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 41%] Built target sra-sort
[ 41%] Building CXX object tools/loaders/general-loader/CMakeFiles/general-loader.dir/protocol-parser.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/loaders/general-loader/CMakeFiles/general-loader.dir/protocol-parser.cpp.o -MF CMakeFiles/general-loader.dir/protocol-parser.cpp.o.d -o CMakeFiles/general-loader.dir/protocol-parser.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/protocol-parser.cpp
make  -f tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-checklookup.dir/build.make tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-checklookup.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-checklookup.dir/DependInfo.cmake "--color="
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/kdbmeta.dir/link.d CMakeFiles/kdbmeta.dir/kdbmeta.c.o -o ../../../bin/kdbmeta  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f kdbmeta.3.2.1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-checklookup.dir/build.make tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-checklookup.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv kdbmeta kdbmeta.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s kdbmeta.3.2.1 kdbmeta.3
[ 41%] Building CXX object tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-checklookup.dir/idx-text/checklookup.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/.. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/loaders/general-loader/test/vschema/CMakeFiles/idx-text-checklookup.dir/idx-text/checklookup.cpp.o -MF CMakeFiles/idx-text-checklookup.dir/idx-text/checklookup.cpp.o.d -o CMakeFiles/idx-text-checklookup.dir/idx-text/checklookup.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/idx-text/checklookup.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s kdbmeta.3 kdbmeta
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/factory-mappings.c: In function 'CGMappings25_Read':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/factory-mappings.c:382:16: warning: 'tmp' may be used uninitialized [-Wmaybe-uninitialized]
  382 |         if( tmp[0] < 33 || tmp[0] > 126 ) {
      |             ~~~^~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/factory-mappings.c:358:14: note: 'tmp' declared here
  358 |         char tmp[2];
      |              ^~~
[ 41%] Linking CXX executable ../../../bin/sra-sort-cg
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sra-sort && /usr/bin/cmake -E cmake_link_script CMakeFiles/sra-sort-cg.dir/link.txt --verbose=1
[ 41%] Built target kdbmeta
make  -f tools/loaders/vdb-lock/CMakeFiles/vdb-lock.dir/build.make tools/loaders/vdb-lock/CMakeFiles/vdb-lock.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/vdb-lock /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/vdb-lock /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/vdb-lock/CMakeFiles/vdb-lock.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/vdb-lock/CMakeFiles/vdb-lock.dir/build.make tools/loaders/vdb-lock/CMakeFiles/vdb-lock.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 41%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-metrics.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -DH5_USE_110_API -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-metrics.c.o -MF CMakeFiles/pacbio-load.dir/pl-metrics.c.o.d -o CMakeFiles/pacbio-load.dir/pl-metrics.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load/pl-metrics.c
[ 41%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/factory-reads.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/factory-reads.c.o -MF CMakeFiles/cg-load.dir/factory-reads.c.o.d -o CMakeFiles/cg-load.dir/factory-reads.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/factory-reads.c
[ 41%] Building C object tools/loaders/vdb-lock/CMakeFiles/vdb-lock.dir/vdb-lock.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/vdb-lock && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-lock\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/vdb-lock/CMakeFiles/vdb-lock.dir/vdb-lock.c.o -MF CMakeFiles/vdb-lock.dir/vdb-lock.c.o.d -o CMakeFiles/vdb-lock.dir/vdb-lock.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/vdb-lock/vdb-lock.c
In file included from /usr/include/c++/14/ios:42,
                 from /usr/include/c++/14/ostream:40,
                 from /usr/include/c++/14/iostream:41,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/general-writer/general-writer.hpp:34,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/idx-text/makeinputs.cpp:30:
In static member function 'static constexpr std::size_t std::char_traits<char>::length(const char_type*)',
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::basic_string(const _CharT*, const _Alloc&) [with <template-parameter-2-1> = std::allocator<char>; _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:653:49,
    inlined from 'void run(const char*, TestCaseType, const std::string*, int)' at /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/idx-text/makeinputs.cpp:77:25:
/usr/include/c++/14/bits/char_traits.h:391:32: warning: 'db_schema' may be used uninitialized [-Wmaybe-uninitialized]
  391 |         return __builtin_strlen(__s);
      |                ~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/idx-text/makeinputs.cpp: In function 'void run(const char*, TestCaseType, const std::string*, int)':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/idx-text/makeinputs.cpp:57:21: note: 'db_schema' was declared here
   57 |         const char* db_schema;
      |                     ^~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/idx-text/makeinputs.cpp:101:16: warning: 'gw' may be used uninitialized [-Wmaybe-uninitialized]
  101 |         delete gw;
      |                ^~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/idx-text/makeinputs.cpp:54:20: note: 'gw' was declared here
   54 |     GeneralWriter *gw;
      |                    ^~
[ 41%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/factory-tag-lfr.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/factory-tag-lfr.c.o -MF CMakeFiles/cg-load.dir/factory-tag-lfr.c.o.d -o CMakeFiles/cg-load.dir/factory-tag-lfr.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/factory-tag-lfr.c
[ 41%] Linking CXX executable ../../../bin/vdb-lock
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/bio-end/makeinputs.cpp: In function 'void run(const char*, bool, const int32_t*, const int32_t*, const int8_t*, int)':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/bio-end/makeinputs.cpp:76:16: warning: 'gw' may be used uninitialized [-Wmaybe-uninitialized]
   76 |         delete gw;
      |                ^~
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/vdb-lock && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-lock.dir/link.txt --verbose=1
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/bio-end/makeinputs.cpp:45:20: note: 'gw' was declared here
   45 |     GeneralWriter *gw;
      |                    ^~
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sra-sort-cg.dir/link.d "CMakeFiles/sra-sort-cg.dir/caps.c.o" "CMakeFiles/sra-sort-cg.dir/mem.c.o" "CMakeFiles/sra-sort-cg.dir/membank.c.o" "CMakeFiles/sra-sort-cg.dir/paged-membank.c.o" "CMakeFiles/sra-sort-cg.dir/paged-mmapbank.c.o" "CMakeFiles/sra-sort-cg.dir/except.c.o" "CMakeFiles/sra-sort-cg.dir/idx-mapping.c.o" "CMakeFiles/sra-sort-cg.dir/map-file.c.o" "CMakeFiles/sra-sort-cg.dir/col-pair.c.o" "CMakeFiles/sra-sort-cg.dir/row-set.c.o" "CMakeFiles/sra-sort-cg.dir/simple-row-set.c.o" "CMakeFiles/sra-sort-cg.dir/mapping-row-set.c.o" "CMakeFiles/sra-sort-cg.dir/sorting-row-set.c.o" "CMakeFiles/sra-sort-cg.dir/meta-pair.c.o" "CMakeFiles/sra-sort-cg.dir/dir-pair.c.o" "CMakeFiles/sra-sort-cg.dir/tbl-pair.c.o" "CMakeFiles/sra-sort-cg.dir/db-pair.c.o" "CMakeFiles/sra-sort-cg.dir/glob-poslen.c.o" "CMakeFiles/sra-sort-cg.dir/poslen-col-pair.c.o" "CMakeFiles/sra-sort-cg.dir/ref-alignid-col.c.o" "CMakeFiles/sra-sort-cg.dir/buff-writer.c.o" "CMakeFiles/sra-sort-cg.dir/id-mapper-col.c.o" "CMakeFiles/sra-sort-cg.dir/capture-first-half-aligned.c.o" "CMakeFiles/sra-sort-cg.dir/run.c.o" "CMakeFiles/sra-sort-cg.dir/sra-sort.c.o" "CMakeFiles/sra-sort-cg.dir/xcheck-ref-align.c.o" "CMakeFiles/sra-sort-cg.dir/csra-tbl.c.o" "CMakeFiles/sra-sort-cg.dir/csra-pair.c.o" -o ../../../bin/sra-sort-cg  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto -lbz2 -llzma
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f sra-sort-cg.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv sra-sort-cg sra-sort-cg.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-sort-cg.3.2.1 sra-sort-cg.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-sort-cg.3 sra-sort-cg
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 41%] Built target sra-sort-cg
make  -f tools/loaders/vdb-unlock/CMakeFiles/vdb-unlock.dir/build.make tools/loaders/vdb-unlock/CMakeFiles/vdb-unlock.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/vdb-unlock /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/vdb-unlock /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/vdb-unlock/CMakeFiles/vdb-unlock.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/vdb-unlock/CMakeFiles/vdb-unlock.dir/build.make tools/loaders/vdb-unlock/CMakeFiles/vdb-unlock.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 41%] Building C object tools/loaders/vdb-unlock/CMakeFiles/vdb-unlock.dir/vdb-unlock.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/vdb-unlock && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-unlock\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/vdb-unlock/CMakeFiles/vdb-unlock.dir/vdb-unlock.c.o -MF CMakeFiles/vdb-unlock.dir/vdb-unlock.c.o.d -o CMakeFiles/vdb-unlock.dir/vdb-unlock.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/vdb-unlock/vdb-unlock.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-lock.dir/link.d "CMakeFiles/vdb-lock.dir/vdb-lock.c.o" -o ../../../bin/vdb-lock  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f vdb-lock.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv vdb-lock vdb-lock.3.2.1
[ 41%] Linking CXX executable ../../../../../test-bin/bio-end-makeinputs
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-lock.3.2.1 vdb-lock.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema && /usr/bin/cmake -E cmake_link_script CMakeFiles/bio-end-makeinputs.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-lock.3 vdb-lock
[ 41%] Linking CXX executable ../../../../../test-bin/idx-text-makeinputs
[ 41%] Linking CXX executable ../../../bin/vdb-unlock
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema && /usr/bin/cmake -E cmake_link_script CMakeFiles/idx-text-makeinputs.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/vdb-unlock && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-unlock.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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[ 41%] Building C object tools/external/prefetch/CMakeFiles/prefetch.dir/kfile-no-q.c.o
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make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 41%] Built target idx-text-makeinputs
[ 41%] Built target bio-end-makeinputs
make  -f tools/external/vdb-config/tui/CMakeFiles/tui.dir/build.make tools/external/vdb-config/tui/CMakeFiles/tui.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui/CMakeFiles/tui.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump/CMakeFiles/fastq-dump.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/vdb-config/tui/CMakeFiles/tui.dir/build.make tools/external/vdb-config/tui/CMakeFiles/tui.dir/build
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-unlock.dir/link.d "CMakeFiles/vdb-unlock.dir/vdb-unlock.c.o" -o ../../../bin/vdb-unlock  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f vdb-unlock.3.2.1
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/sra-dump/CMakeFiles/fastq-dump.dir/build.make tools/external/sra-dump/CMakeFiles/fastq-dump.dir/build
[ 41%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/f1_5.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv vdb-unlock vdb-unlock.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/f1_5.c.o -MF CMakeFiles/cg-load.dir/f1_5.c.o.d -o CMakeFiles/cg-load.dir/f1_5.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/f1_5.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-unlock.3.2.1 vdb-unlock.3
[ 41%] Building C object tools/external/prefetch/CMakeFiles/prefetch.dir/PrfMain.c.o
[ 41%] Building C object tools/external/sra-dump/CMakeFiles/fastq-dump.dir/factory.c.o
[ 41%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/dir_dlg.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/prefetch && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/prefetch\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/prefetch/CMakeFiles/prefetch.dir/PrfMain.c.o -MF CMakeFiles/prefetch.dir/PrfMain.c.o.d -o CMakeFiles/prefetch.dir/PrfMain.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/prefetch/PrfMain.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/fastq-dump.dir/factory.c.o -MF CMakeFiles/fastq-dump.dir/factory.c.o.d -o CMakeFiles/fastq-dump.dir/factory.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/factory.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-unlock.3 vdb-unlock
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/dir_dlg.c.o -MF CMakeFiles/tui.dir/dir_dlg.c.o.d -o CMakeFiles/tui.dir/dir_dlg.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/dir_dlg.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 41%] Built target vdb-unlock
make  -f tools/external/sra-dump/CMakeFiles/sff-dump.dir/build.make tools/external/sra-dump/CMakeFiles/sff-dump.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump/CMakeFiles/sff-dump.dir/DependInfo.cmake "--color="
[ 41%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-regions.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -DH5_USE_110_API -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-regions.c.o -MF CMakeFiles/pacbio-load.dir/pl-regions.c.o.d -o CMakeFiles/pacbio-load.dir/pl-regions.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load/pl-regions.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/sra-dump/CMakeFiles/sff-dump.dir/build.make tools/external/sra-dump/CMakeFiles/sff-dump.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 41%] Building C object tools/external/sra-dump/CMakeFiles/sff-dump.dir/factory.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/sff-dump.dir/factory.c.o -MF CMakeFiles/sff-dump.dir/factory.c.o.d -o CMakeFiles/sff-dump.dir/factory.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/factory.c
[ 41%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/f1_7.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/f1_7.c.o -MF CMakeFiles/cg-load.dir/f1_7.c.o.d -o CMakeFiles/cg-load.dir/f1_7.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/f1_7.c
[ 41%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/eventring.c.o
[ 41%] Building CXX object tools/loaders/general-loader/test/CMakeFiles/makeinputs.dir/testsource.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/.. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/loaders/general-loader/test/CMakeFiles/makeinputs.dir/testsource.cpp.o -MF CMakeFiles/makeinputs.dir/testsource.cpp.o.d -o CMakeFiles/makeinputs.dir/testsource.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/testsource.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/eventring.c.o -MF CMakeFiles/tui.dir/eventring.c.o.d -o CMakeFiles/tui.dir/eventring.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/eventring.c
[ 42%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/f2_0.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/f2_0.c.o -MF CMakeFiles/cg-load.dir/f2_0.c.o.d -o CMakeFiles/cg-load.dir/f2_0.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/f2_0.c
[ 42%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/f2_2.c.o
[ 42%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/file_dlg.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/file_dlg.c.o -MF CMakeFiles/tui.dir/file_dlg.c.o.d -o CMakeFiles/tui.dir/file_dlg.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/file_dlg.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/f2_2.c.o -MF CMakeFiles/cg-load.dir/f2_2.c.o.d -o CMakeFiles/cg-load.dir/f2_2.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/f2_2.c
[ 42%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/f2_4.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/f2_4.c.o -MF CMakeFiles/cg-load.dir/f2_4.c.o.d -o CMakeFiles/cg-load.dir/f2_4.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/f2_4.c
[ 42%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-progress.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -DH5_USE_110_API -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pl-progress.c.o -MF CMakeFiles/pacbio-load.dir/pl-progress.c.o.d -o CMakeFiles/pacbio-load.dir/pl-progress.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load/pl-progress.c
[ 42%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/line_policy.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/line_policy.c.o -MF CMakeFiles/tui.dir/line_policy.c.o.d -o CMakeFiles/tui.dir/line_policy.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/line_policy.c
[ 42%] Linking CXX static library ../../../../ilib/libtui_cpp.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cmake -P CMakeFiles/tui_cpp.dir/cmake_clean_target.cmake
[ 42%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/f2_5.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/f2_5.c.o -MF CMakeFiles/cg-load.dir/f2_5.c.o.d -o CMakeFiles/cg-load.dir/f2_5.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/f2_5.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cmake -E cmake_link_script CMakeFiles/tui_cpp.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../../ilib/libtui_cpp.a CMakeFiles/tui_cpp.dir/tui_cpp.cpp.o
/usr/bin/ranlib ../../../../ilib/libtui_cpp.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 42%] Building C object tools/external/sra-dump/CMakeFiles/fastq-dump.dir/fasta_dump.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/fastq-dump.dir/fasta_dump.c.o -MF CMakeFiles/fastq-dump.dir/fasta_dump.c.o.d -o CMakeFiles/fastq-dump.dir/fasta_dump.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/fasta_dump.c
[ 42%] Built target tui_cpp
make  -f tools/external/sra-dump/CMakeFiles/illumina-dump.dir/build.make tools/external/sra-dump/CMakeFiles/illumina-dump.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump/CMakeFiles/illumina-dump.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/sra-dump/CMakeFiles/illumina-dump.dir/build.make tools/external/sra-dump/CMakeFiles/illumina-dump.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 42%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/file.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/file.c.o -MF CMakeFiles/cg-load.dir/file.c.o.d -o CMakeFiles/cg-load.dir/file.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/file.c
[ 42%] Building C object tools/external/sra-dump/CMakeFiles/illumina-dump.dir/factory.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/illumina-dump.dir/factory.c.o -MF CMakeFiles/illumina-dump.dir/factory.c.o.d -o CMakeFiles/illumina-dump.dir/factory.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/factory.c
[ 42%] Building CXX object tools/loaders/general-loader/CMakeFiles/general-loader.dir/database-loader.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/loaders/general-loader/CMakeFiles/general-loader.dir/database-loader.cpp.o -MF CMakeFiles/general-loader.dir/database-loader.cpp.o.d -o CMakeFiles/general-loader.dir/database-loader.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/database-loader.cpp
[ 43%] Building C object tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pacbio-load.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/pacbio-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load -I/usr/include/hdf5/serial -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -DH5_USE_110_API -std=c11   -rdynamic -MD -MT tools/loaders/pacbio-load/CMakeFiles/pacbio-load.dir/pacbio-load.c.o -MF CMakeFiles/pacbio-load.dir/pacbio-load.c.o.d -o CMakeFiles/pacbio-load.dir/pacbio-load.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load/pacbio-load.c
[ 44%] Building C object tools/external/sra-dump/CMakeFiles/sff-dump.dir/fasta_dump.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/sff-dump.dir/fasta_dump.c.o -MF CMakeFiles/sff-dump.dir/fasta_dump.c.o.d -o CMakeFiles/sff-dump.dir/fasta_dump.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/fasta_dump.c
[ 44%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/screen.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/screen.c.o -MF CMakeFiles/tui.dir/screen.c.o.d -o CMakeFiles/tui.dir/screen.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/screen.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load/pacbio-load.c: In function 'pacbio_meta_entry':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/pacbio-load/pacbio-load.c:219:53: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  219 |             rc = KLoaderMeta_Write( node, toolname, __DATE__, "PacBio HDF5", KAppVersion() );
      |                                                     ^~~~~~~~
[ 44%] Building C object tools/external/sra-dump/CMakeFiles/fastq-dump.dir/core.c.o
[ 44%] Building C object tools/external/prefetch/CMakeFiles/prefetch.dir/prefetch.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/fastq-dump.dir/core.c.o -MF CMakeFiles/fastq-dump.dir/core.c.o.d -o CMakeFiles/fastq-dump.dir/core.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/core.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/prefetch && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/prefetch\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/prefetch/CMakeFiles/prefetch.dir/prefetch.c.o -MF CMakeFiles/prefetch.dir/prefetch.c.o.d -o CMakeFiles/prefetch.dir/prefetch.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/prefetch/prefetch.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/database-loader.cpp:833:90: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  833 |                         rc = KLoaderMeta_WriteWithVersion ( node, m_programName.c_str(), __DATE__, KAppVersion(), m_softwareName.c_str(), m_softwareVersion );
      |                                                                                          ^~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/core.c: In function 'KMain':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/core.c:1011:23: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
 1011 |     ReportBuildDate ( __DATE__ );
      |                       ^~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/testsource.cpp: In constructor 'TestSource::Buffer::Buffer(const std::string&, uint32_t, uint32_t, bool)':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/testsource.cpp:47:13: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' specified bound 8 equals destination size [-Wstringop-truncation]
   47 |     strncpy ( m_header . dad . signature, p_signature . c_str(), sizeof m_header . dad . signature );
      |             ^
[ 45%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/string_cache.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/string_cache.c.o -MF CMakeFiles/tui.dir/string_cache.c.o.d -o CMakeFiles/tui.dir/string_cache.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/string_cache.c
[ 45%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/file-version-factory.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/file-version-factory.c.o -MF CMakeFiles/cg-load.dir/file-version-factory.c.o.d -o CMakeFiles/cg-load.dir/file-version-factory.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/file-version-factory.c
[ 45%] Linking CXX executable ../../../bin/pacbio-load
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/pacbio-load && /usr/bin/cmake -E cmake_link_script CMakeFiles/pacbio-load.dir/link.txt --verbose=1
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h: In instantiation of 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_value(T&&) [with Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; T = const std::__cxx11::basic_string<char>&]':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1777:29:   required from 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_arg(T&&) [with bool IS_PACKED = true; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; type <anonymous> = fmt::v9::detail::type::string_type; T = const std::__cxx11::basic_string<char>&; typename std::enable_if<IS_PACKED, int>::type <anonymous> = 0]'
 1777 |   return make_value<Context>(val);
      |          ~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1901:77:   required from 'constexpr fmt::v9::format_arg_store<Context, Args>::format_arg_store(T&& ...) [with T = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, spdlog::stopwatch&, long unsigned int&}; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, spdlog::stopwatch, long unsigned int}]'
 1899 |         data_{detail::make_arg<
      |               ~~~~~~~~~~~~~~~~~                                              
 1900 |             is_packed, Context,
      |             ~~~~~~~~~~~~~~~~~~~                                              
 1901 |             detail::mapped_type_constant<remove_cvref_t<T>, Context>::value>(
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
 1902 |             FMT_FORWARD(args))...} {
      |             ~~~~~~~~~~~~~~~~~~                                               
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1918:31:   required from 'void spdlog::logger::log_(spdlog::source_loc, spdlog::level::level_enum, spdlog::string_view_t, Args&& ...) [with Args = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, spdlog::stopwatch&, long unsigned int}; spdlog::string_view_t = fmt::v9::basic_string_view<char>]'
 1918 |   return {FMT_FORWARD(args)...};
      |                               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/logger.h:90:13:   required from 'void spdlog::logger::log(spdlog::source_loc, spdlog::level::level_enum, fmt::v9::format_string<T ...>, Args&& ...) [with Args = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, spdlog::stopwatch&, long unsigned int}; fmt::v9::format_string<T ...> = fmt::v9::basic_format_string<char, const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, spdlog::stopwatch&, long unsigned int>]'
   90 |         log_(loc, lvl, details::to_string_view(fmt), std::forward<Args>(args)...);
      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/logger.h:96:12:   required from 'void spdlog::logger::log(spdlog::level::level_enum, fmt::v9::format_string<T ...>, Args&& ...) [with Args = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, spdlog::stopwatch&, long unsigned int}; fmt::v9::format_string<T ...> = fmt::v9::basic_format_string<char, const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, spdlog::stopwatch&, long unsigned int>]'
   96 |         log(source_loc{}, lvl, fmt, std::forward<Args>(args)...);
      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/logger.h:158:12:   required from 'void spdlog::logger::info(fmt::v9::format_string<T ...>, Args&& ...) [with Args = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, spdlog::stopwatch&, long unsigned int}; fmt::v9::format_string<T ...> = fmt::v9::basic_format_string<char, const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, spdlog::stopwatch&, long unsigned int>]'
  158 |         log(level::info, fmt, std::forward<Args>(args)...);
      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/spdlog.h:170:31:   required from 'void spdlog::info(fmt::v9::format_string<T ...>, Args&& ...) [with Args = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, stopwatch&, long unsigned int}; fmt::v9::format_string<T ...> = fmt::v9::basic_format_string<char, const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, stopwatch&, long unsigned int>]'
  170 |     default_logger_raw()->info(fmt, std::forward<Args>(args)...);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/bam-loader/spot_assembly.hpp:406:21:   required from here
  406 |         spdlog::info("{} Batch insert: {:.3}, {:L} reads", batch_idx, sw, new_batch.m_spot_map->size());
      |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/logger.h:374:75:   in 'constexpr' expansion of 'fmt::v9::make_format_args<>(args#0, args#1, ((long unsigned int&)args#2))'
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:15: warning: possibly dangling reference to a temporary [-Wdangling-reference]
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |               ^~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:46: note: the temporary was destroyed at the end of the full expression 'fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >().fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >::map<std::__cxx11::basic_string<char> >((* & val))'
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
[ 45%] Building C object tools/external/sra-dump/CMakeFiles/sff-dump.dir/core.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/sff-dump.dir/core.c.o -MF CMakeFiles/sff-dump.dir/core.c.o.d -o CMakeFiles/sff-dump.dir/core.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/core.c
[ 45%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/formats.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/formats.c.o -MF CMakeFiles/cg-load.dir/formats.c.o.d -o CMakeFiles/cg-load.dir/formats.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/formats.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/core.c: In function 'KMain':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/core.c:1011:23: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
 1011 |     ReportBuildDate ( __DATE__ );
      |                       ^~~~~~~~
[ 45%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui.c.o -MF CMakeFiles/tui.dir/tui.c.o.d -o CMakeFiles/tui.dir/tui.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/tui.c
[ 45%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/writer-algn.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/writer-algn.c.o -MF CMakeFiles/cg-load.dir/writer-algn.c.o.d -o CMakeFiles/cg-load.dir/writer-algn.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/writer-algn.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/pacbio-load.dir/link.d "CMakeFiles/pacbio-load.dir/hdf5/hdf5arrayfile.c.o" "CMakeFiles/pacbio-load.dir/hdf5/hdf5dir.c.o" "CMakeFiles/pacbio-load.dir/hdf5/hdf5file.c.o" "CMakeFiles/pacbio-load.dir/pl-context.c.o" "CMakeFiles/pacbio-load.dir/pl-tools.c.o" "CMakeFiles/pacbio-load.dir/pl-zmw.c.o" "CMakeFiles/pacbio-load.dir/pl-basecalls_cmn.c.o" "CMakeFiles/pacbio-load.dir/pl-sequence.c.o" "CMakeFiles/pacbio-load.dir/pl-consensus.c.o" "CMakeFiles/pacbio-load.dir/pl-passes.c.o" "CMakeFiles/pacbio-load.dir/pl-metrics.c.o" "CMakeFiles/pacbio-load.dir/pl-regions.c.o" "CMakeFiles/pacbio-load.dir/pl-progress.c.o" "CMakeFiles/pacbio-load.dir/pacbio-load.c.o" -o ../../../bin/pacbio-load  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/aarch64-linux-gnu/libcrypto.so /usr/lib/aarch64-linux-gnu/libcurl.so /usr/lib/aarch64-linux-gnu/libpthread.a /usr/lib/aarch64-linux-gnu/libsz.so /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libdl.a -lm /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f pacbio-load.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv pacbio-load pacbio-load.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s pacbio-load.3.2.1 pacbio-load.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s pacbio-load.3 pacbio-load
[ 45%] Building C object tools/external/sra-dump/CMakeFiles/illumina-dump.dir/fasta_dump.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/illumina-dump.dir/fasta_dump.c.o -MF CMakeFiles/illumina-dump.dir/fasta_dump.c.o.d -o CMakeFiles/illumina-dump.dir/fasta_dump.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/fasta_dump.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 45%] Built target pacbio-load
make  -f tools/external/sra-dump/CMakeFiles/abi-dump.dir/build.make tools/external/sra-dump/CMakeFiles/abi-dump.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump/CMakeFiles/abi-dump.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 45%] Building C object tools/external/sra-dump/CMakeFiles/abi-dump.dir/factory.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/abi-dump.dir/factory.c.o -MF CMakeFiles/abi-dump.dir/factory.c.o.d -o CMakeFiles/abi-dump.dir/factory.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/factory.c
[ 45%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_dlg.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_dlg.c.o -MF CMakeFiles/tui.dir/tui_dlg.c.o.d -o CMakeFiles/tui.dir/tui_dlg.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/tui_dlg.c
[ 46%] Building C object tools/external/sra-dump/CMakeFiles/fastq-dump.dir/fastq.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/fastq-dump.dir/fastq.c.o -MF CMakeFiles/fastq-dump.dir/fastq.c.o.d -o CMakeFiles/fastq-dump.dir/fastq.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/fastq.c
[ 46%] Building C object tools/external/sra-dump/CMakeFiles/illumina-dump.dir/core.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/illumina-dump.dir/core.c.o -MF CMakeFiles/illumina-dump.dir/core.c.o.d -o CMakeFiles/illumina-dump.dir/core.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/core.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/core.c: In function 'KMain':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/core.c:1011:23: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
 1011 |     ReportBuildDate ( __DATE__ );
      |                       ^~~~~~~~
[ 46%] Linking CXX executable ../../../../test-bin/makeinputs
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/makeinputs.dir/link.txt --verbose=1
[ 46%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/writer-evidence-dnbs.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/writer-evidence-dnbs.c.o -MF CMakeFiles/cg-load.dir/writer-evidence-dnbs.c.o.d -o CMakeFiles/cg-load.dir/writer-evidence-dnbs.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/writer-evidence-dnbs.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/makeinputs.dir/link.d CMakeFiles/makeinputs.dir/makeinputs.cpp.o CMakeFiles/makeinputs.dir/testsource.cpp.o -o ../../../../test-bin/makeinputs  ../../../../ilib/libgeneral-writer.a -lncbi-vdb
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 46%] Built target makeinputs
make  -f tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/build.make tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/DependInfo.cmake "--color="
[ 47%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/writer-evidence-intervals.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/writer-evidence-intervals.c.o -MF CMakeFiles/cg-load.dir/writer-evidence-intervals.c.o.d -o CMakeFiles/cg-load.dir/writer-evidence-intervals.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/writer-evidence-intervals.c
[ 47%] Building C object tools/external/sra-dump/CMakeFiles/abi-dump.dir/fasta_dump.c.o
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/build.make tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/build
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/abi-dump.dir/fasta_dump.c.o -MF CMakeFiles/abi-dump.dir/fasta_dump.c.o.d -o CMakeFiles/abi-dump.dir/fasta_dump.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/fasta_dump.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 47%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/dyn_string.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/dyn_string.c.o -MF CMakeFiles/sra-pileup.dir/dyn_string.c.o.d -o CMakeFiles/sra-pileup.dir/dyn_string.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/dyn_string.c
[ 47%] Building C object tools/external/sra-dump/CMakeFiles/sff-dump.dir/sff.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/sff-dump.dir/sff.c.o -MF CMakeFiles/sff-dump.dir/sff.c.o.d -o CMakeFiles/sff-dump.dir/sff.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/sff.c
[ 47%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/cmdline_cmn.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/cmdline_cmn.c.o -MF CMakeFiles/sra-pileup.dir/cmdline_cmn.c.o.d -o CMakeFiles/sra-pileup.dir/cmdline_cmn.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/cmdline_cmn.c
[ 47%] Building C object tools/loaders/cg-load/CMakeFiles/cg-load.dir/writer-seq.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/cg-load\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/cg-load/CMakeFiles/cg-load.dir/writer-seq.c.o -MF CMakeFiles/cg-load.dir/writer-seq.c.o.d -o CMakeFiles/cg-load.dir/writer-seq.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/cg-load/writer-seq.c
[ 47%] Linking CXX executable ../../../bin/sff-dump
[ 48%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/out_redir.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/out_redir.c.o -MF CMakeFiles/sra-pileup.dir/out_redir.c.o.d -o CMakeFiles/sra-pileup.dir/out_redir.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/out_redir.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cmake -E cmake_link_script CMakeFiles/sff-dump.dir/link.txt --verbose=1
[ 48%] Linking CXX executable ../../../bin/cg-load
[ 48%] Building C object tools/external/sra-dump/CMakeFiles/abi-dump.dir/core.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/cg-load && /usr/bin/cmake -E cmake_link_script CMakeFiles/cg-load.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/abi-dump.dir/core.c.o -MF CMakeFiles/abi-dump.dir/core.c.o.d -o CMakeFiles/abi-dump.dir/core.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/core.c
[ 49%] Linking CXX executable ../../../../../test-bin/idx-text-checklookup
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/vschema && /usr/bin/cmake -E cmake_link_script CMakeFiles/idx-text-checklookup.dir/link.txt --verbose=1
[ 49%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/perf_log.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/perf_log.c.o -MF CMakeFiles/sra-pileup.dir/perf_log.c.o.d -o CMakeFiles/sra-pileup.dir/perf_log.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/perf_log.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/core.c: In function 'KMain':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/core.c:1011:23: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
 1011 |     ReportBuildDate ( __DATE__ );
      |                       ^~~~~~~~
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/cg-load.dir/link.d "CMakeFiles/cg-load.dir/cg-load.c.o" "CMakeFiles/cg-load.dir/factory-evidence-intervals.c.o" "CMakeFiles/cg-load.dir/factory-evidence-dnbs.c.o" "CMakeFiles/cg-load.dir/factory-mappings.c.o" "CMakeFiles/cg-load.dir/factory-reads.c.o" "CMakeFiles/cg-load.dir/factory-tag-lfr.c.o" "CMakeFiles/cg-load.dir/f1_3.c.o" "CMakeFiles/cg-load.dir/f1_5.c.o" "CMakeFiles/cg-load.dir/f1_7.c.o" "CMakeFiles/cg-load.dir/f2_0.c.o" "CMakeFiles/cg-load.dir/f2_2.c.o" "CMakeFiles/cg-load.dir/f2_4.c.o" "CMakeFiles/cg-load.dir/f2_5.c.o" "CMakeFiles/cg-load.dir/file.c.o" "CMakeFiles/cg-load.dir/file-version-factory.c.o" "CMakeFiles/cg-load.dir/formats.c.o" "CMakeFiles/cg-load.dir/writer-algn.c.o" "CMakeFiles/cg-load.dir/writer-evidence-dnbs.c.o" "CMakeFiles/cg-load.dir/writer-evidence-intervals.c.o" "CMakeFiles/cg-load.dir/writer-seq.c.o" -o ../../../bin/cg-load  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f cg-load.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv cg-load cg-load.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s cg-load.3.2.1 cg-load.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s cg-load.3 cg-load
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/idx-text-checklookup.dir/link.d "CMakeFiles/idx-text-checklookup.dir/idx-text/checklookup.cpp.o" -o ../../../../../test-bin/idx-text-checklookup  /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 49%] Built target cg-load
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sff-dump.dir/link.d "CMakeFiles/sff-dump.dir/factory.c.o" "CMakeFiles/sff-dump.dir/fasta_dump.c.o" "CMakeFiles/sff-dump.dir/core.c.o" "CMakeFiles/sff-dump.dir/sff.c.o" -o ../../../bin/sff-dump  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f sff-dump.3.2.1
make  -f tools/external/sra-pileup/CMakeFiles/sam-dump.dir/build.make tools/external/sra-pileup/CMakeFiles/sam-dump.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup/CMakeFiles/sam-dump.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv sff-dump sff-dump.3.2.1
[ 49%] Built target idx-text-checklookup
make  -f tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/build.make tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sff-dump.3.2.1 sff-dump.3
[ 49%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/reref.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/reref.c.o -MF CMakeFiles/sra-pileup.dir/reref.c.o.d -o CMakeFiles/sra-pileup.dir/reref.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/reref.c
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make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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make  -f tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/build.make tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/build
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/illumina-dump.dir/illumina.c.o -MF CMakeFiles/illumina-dump.dir/illumina.c.o.d -o CMakeFiles/illumina-dump.dir/illumina.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/illumina.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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[ 50%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/helper.c.o
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/helper.c.o -MF CMakeFiles/fasterq-dump.dir/helper.c.o.d -o CMakeFiles/fasterq-dump.dir/helper.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/helper.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/build.make tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 50%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-context.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-context.c.o -MF CMakeFiles/vdb-dump.dir/vdb-dump-context.c.o.d -o CMakeFiles/vdb-dump.dir/vdb-dump-context.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump/vdb-dump-context.c
[ 50%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_dlg_helper.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_dlg_helper.c.o -MF CMakeFiles/tui.dir/tui_dlg_helper.c.o.d -o CMakeFiles/tui.dir/tui_dlg_helper.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/tui_dlg_helper.c
[ 50%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/perf_log.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/perf_log.c.o -MF CMakeFiles/sam-dump.dir/perf_log.c.o.d -o CMakeFiles/sam-dump.dir/perf_log.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/perf_log.c
[ 50%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_menu.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_menu.c.o -MF CMakeFiles/tui.dir/tui_menu.c.o.d -o CMakeFiles/tui.dir/tui_menu.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/tui_menu.c
[ 50%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/cg_tools.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/cg_tools.c.o -MF CMakeFiles/sra-pileup.dir/cg_tools.c.o.d -o CMakeFiles/sra-pileup.dir/cg_tools.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/cg_tools.c
[ 50%] Linking CXX executable ../../../bin/fastq-dump
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastq-dump.dir/link.txt --verbose=1
[ 50%] Linking CXX executable ../../../bin/illumina-dump
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cmake -E cmake_link_script CMakeFiles/illumina-dump.dir/link.txt --verbose=1
[ 50%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/rna_splice_log.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/rna_splice_log.c.o -MF CMakeFiles/sam-dump.dir/rna_splice_log.c.o.d -o CMakeFiles/sam-dump.dir/rna_splice_log.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/rna_splice_log.c
[ 50%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/arg_helper.c.o
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/illumina-dump.dir/link.d "CMakeFiles/illumina-dump.dir/factory.c.o" "CMakeFiles/illumina-dump.dir/fasta_dump.c.o" "CMakeFiles/illumina-dump.dir/core.c.o" "CMakeFiles/illumina-dump.dir/illumina.c.o" -o ../../../bin/illumina-dump  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f illumina-dump.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/arg_helper.c.o -MF CMakeFiles/fasterq-dump.dir/arg_helper.c.o.d -o CMakeFiles/fasterq-dump.dir/arg_helper.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/arg_helper.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/fastq-dump.dir/link.d "CMakeFiles/fastq-dump.dir/factory.c.o" "CMakeFiles/fastq-dump.dir/fasta_dump.c.o" "CMakeFiles/fastq-dump.dir/core.c.o" "CMakeFiles/fastq-dump.dir/fastq.c.o" -o ../../../bin/fastq-dump  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f fastq-dump.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv illumina-dump illumina-dump.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv fastq-dump fastq-dump.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s illumina-dump.3.2.1 illumina-dump.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s fastq-dump.3.2.1 fastq-dump.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s illumina-dump.3 illumina-dump
[ 50%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-dump-opts.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-dump-opts.c.o -MF CMakeFiles/sam-dump.dir/sam-dump-opts.c.o.d -o CMakeFiles/sam-dump.dir/sam-dump-opts.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/sam-dump-opts.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s fastq-dump.3 fastq-dump
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sratools.3.2.1 fastq-dump-driver
[ 50%] Built target illumina-dump
make  -f tools/external/vdb-validate/CMakeFiles/vdb-validate.dir/build.make tools/external/vdb-validate/CMakeFiles/vdb-validate.dir/depend
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-validate /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-validate /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-validate/CMakeFiles/vdb-validate.dir/DependInfo.cmake "--color="
[ 50%] Built target fastq-dump
[ 50%] Building C object tools/external/prefetch/CMakeFiles/prefetch.dir/PrfRetrier.c.o
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/vdb-validate/CMakeFiles/vdb-validate.dir/build.make tools/external/vdb-validate/CMakeFiles/vdb-validate.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/vdb-validate/CMakeFiles/check-corrupt.dir/build.make tools/external/vdb-validate/CMakeFiles/check-corrupt.dir/depend
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/prefetch && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/prefetch\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/prefetch/CMakeFiles/prefetch.dir/PrfRetrier.c.o -MF CMakeFiles/prefetch.dir/PrfRetrier.c.o.d -o CMakeFiles/prefetch.dir/PrfRetrier.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/prefetch/PrfRetrier.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-validate /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-validate /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-validate/CMakeFiles/check-corrupt.dir/DependInfo.cmake "--color="
[ 51%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/dflt_defline.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/dflt_defline.c.o -MF CMakeFiles/fasterq-dump.dir/dflt_defline.c.o.d -o CMakeFiles/fasterq-dump.dir/dflt_defline.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/dflt_defline.c
[ 51%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_palette.c.o
[ 51%] Building C object tools/external/vdb-validate/CMakeFiles/vdb-validate.dir/main.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_palette.c.o -MF CMakeFiles/tui.dir/tui_palette.c.o.d -o CMakeFiles/tui.dir/tui_palette.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/tui_palette.c
[ 52%] Building C object tools/external/sra-dump/CMakeFiles/abi-dump.dir/abi.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-validate && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-validate\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-validate/CMakeFiles/vdb-validate.dir/main.c.o -MF CMakeFiles/vdb-validate.dir/main.c.o.d -o CMakeFiles/vdb-validate.dir/main.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-validate/main.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-dump/CMakeFiles/abi-dump.dir/abi.c.o -MF CMakeFiles/abi-dump.dir/abi.c.o.d -o CMakeFiles/abi-dump.dir/abi.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-dump/abi.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/vdb-validate/CMakeFiles/check-corrupt.dir/build.make tools/external/vdb-validate/CMakeFiles/check-corrupt.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 52%] Building CXX object tools/external/vdb-validate/CMakeFiles/check-corrupt.dir/check-corrupt.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-validate && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-validate\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/vdb-validate/CMakeFiles/check-corrupt.dir/check-corrupt.cpp.o -MF CMakeFiles/check-corrupt.dir/check-corrupt.cpp.o.d -o CMakeFiles/check-corrupt.dir/check-corrupt.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-validate/check-corrupt.cpp
[ 52%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-coldefs.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-coldefs.c.o -MF CMakeFiles/vdb-dump.dir/vdb-dump-coldefs.c.o.d -o CMakeFiles/vdb-dump.dir/vdb-dump-coldefs.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump/vdb-dump-coldefs.c
[ 52%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_std_dlg.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_std_dlg.c.o -MF CMakeFiles/tui.dir/tui_std_dlg.c.o.d -o CMakeFiles/tui.dir/tui_std_dlg.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/tui_std_dlg.c
[ 52%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/tool_ctx.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/tool_ctx.c.o -MF CMakeFiles/fasterq-dump.dir/tool_ctx.c.o.d -o CMakeFiles/fasterq-dump.dir/tool_ctx.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/tool_ctx.c
[ 52%] Building C object tools/external/prefetch/CMakeFiles/prefetch.dir/PrfOutFile.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/prefetch && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/prefetch\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/prefetch/CMakeFiles/prefetch.dir/PrfOutFile.c.o -MF CMakeFiles/prefetch.dir/PrfOutFile.c.o.d -o CMakeFiles/prefetch.dir/PrfOutFile.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/prefetch/PrfOutFile.c
[ 52%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/report_deletes.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/report_deletes.c.o -MF CMakeFiles/sra-pileup.dir/report_deletes.c.o.d -o CMakeFiles/sra-pileup.dir/report_deletes.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/report_deletes.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/tool_ctx.c: In function 'tctx_extract_short_accession':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/tool_ctx.c:362:22: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  362 |     ReportBuildDate( __DATE__ );
      |                      ^~~~~~~~
[ 52%] Building C object tools/external/vdb-validate/CMakeFiles/vdb-validate.dir/vdb-validate.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-validate && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-validate\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-validate/CMakeFiles/vdb-validate.dir/vdb-validate.c.o -MF CMakeFiles/vdb-validate.dir/vdb-validate.c.o.d -o CMakeFiles/vdb-validate.dir/vdb-validate.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-validate/vdb-validate.c
[ 52%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/ref_regions.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/ref_regions.c.o -MF CMakeFiles/sra-pileup.dir/ref_regions.c.o.d -o CMakeFiles/sra-pileup.dir/ref_regions.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/ref_regions.c
[ 52%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget.c.o -MF CMakeFiles/tui.dir/tui_widget.c.o.d -o CMakeFiles/tui.dir/tui_widget.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/tui_widget.c
[ 52%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/out_redir.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/out_redir.c.o -MF CMakeFiles/sam-dump.dir/out_redir.c.o.d -o CMakeFiles/sam-dump.dir/out_redir.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/out_redir.c
[ 52%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/inspector.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/inspector.c.o -MF CMakeFiles/fasterq-dump.dir/inspector.c.o.d -o CMakeFiles/fasterq-dump.dir/inspector.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/inspector.c
[ 52%] Linking CXX executable ../../../bin/abi-dump
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-dump && /usr/bin/cmake -E cmake_link_script CMakeFiles/abi-dump.dir/link.txt --verbose=1
[ 52%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/4na_ascii.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/4na_ascii.c.o -MF CMakeFiles/sra-pileup.dir/4na_ascii.c.o.d -o CMakeFiles/sra-pileup.dir/4na_ascii.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/4na_ascii.c
[ 52%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-hdr.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-hdr.c.o -MF CMakeFiles/sam-dump.dir/sam-hdr.c.o.d -o CMakeFiles/sam-dump.dir/sam-hdr.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/sam-hdr.c
[ 52%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/ref_walker_0.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/ref_walker_0.c.o -MF CMakeFiles/sra-pileup.dir/ref_walker_0.c.o.d -o CMakeFiles/sra-pileup.dir/ref_walker_0.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/ref_walker_0.c
[ 52%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_button.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_button.c.o -MF CMakeFiles/tui.dir/tui_widget_button.c.o.d -o CMakeFiles/tui.dir/tui_widget_button.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/tui_widget_button.c
[ 53%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-tools.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-tools.c.o -MF CMakeFiles/vdb-dump.dir/vdb-dump-tools.c.o.d -o CMakeFiles/vdb-dump.dir/vdb-dump-tools.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump/vdb-dump-tools.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/abi-dump.dir/link.d "CMakeFiles/abi-dump.dir/factory.c.o" "CMakeFiles/abi-dump.dir/fasta_dump.c.o" "CMakeFiles/abi-dump.dir/core.c.o" "CMakeFiles/abi-dump.dir/abi.c.o" -o ../../../bin/abi-dump  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
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[ 53%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/ref_walker.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/ref_walker.c.o -MF CMakeFiles/sra-pileup.dir/ref_walker.c.o.d -o CMakeFiles/sra-pileup.dir/ref_walker.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/ref_walker.c
[ 53%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_checkbox.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_checkbox.c.o -MF CMakeFiles/tui.dir/tui_widget_checkbox.c.o.d -o CMakeFiles/tui.dir/tui_widget_checkbox.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/tui_widget_checkbox.c
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[ 54%] Built target abi-dump
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make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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[ 55%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_grid.c.o
[ 55%] Building C object tools/external/vdb-decrypt/CMakeFiles/vdb-decrypt.dir/vdb-decrypt.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-decrypt && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-decrypt\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-decrypt/CMakeFiles/vdb-decrypt.dir/vdb-decrypt.c.o -MF CMakeFiles/vdb-decrypt.dir/vdb-decrypt.c.o.d -o CMakeFiles/vdb-decrypt.dir/vdb-decrypt.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-decrypt/vdb-decrypt.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_grid.c.o -MF CMakeFiles/tui.dir/tui_widget_grid.c.o.d -o CMakeFiles/tui.dir/tui_widget_grid.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/tui_widget_grid.c
[ 55%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-hdr1.c.o
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/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/inspector.c: In function 'insp_report':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/inspector.c:1155:14: warning: 'res' may be used uninitialized [-Wmaybe-uninitialized]
 1155 |         rc = KOutMsg( "... is %s\n", s_acc_type );
      |              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/inspector.c:248:18: note: 'res' was declared here
  248 |     const char * res;
      |                  ^~~
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/prefetch.dir/link.d "CMakeFiles/prefetch.dir/kfile-no-q.c.o" CMakeFiles/prefetch.dir/PrfMain.c.o CMakeFiles/prefetch.dir/prefetch.c.o CMakeFiles/prefetch.dir/PrfRetrier.c.o CMakeFiles/prefetch.dir/PrfOutFile.c.o -o ../../../bin/prefetch  ../../../ilib/libascp.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f prefetch.3.2.1
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[ 55%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/sbuffer.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/sbuffer.c.o -MF CMakeFiles/fasterq-dump.dir/sbuffer.c.o.d -o CMakeFiles/fasterq-dump.dir/sbuffer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/sbuffer.c
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sratools.3.2.1 prefetch-driver
[ 55%] Building C object tools/external/vdb-decrypt/CMakeFiles/vdb-decrypt.dir/shared.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-decrypt && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-decrypt\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-decrypt/CMakeFiles/vdb-decrypt.dir/shared.c.o -MF CMakeFiles/vdb-decrypt.dir/shared.c.o.d -o CMakeFiles/vdb-decrypt.dir/shared.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-decrypt/shared.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 55%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_inputline.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_inputline.c.o -MF CMakeFiles/tui.dir/tui_widget_inputline.c.o.d -o CMakeFiles/tui.dir/tui_widget_inputline.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/tui_widget_inputline.c
[ 55%] Built target prefetch
make  -f tools/external/vdb-decrypt/CMakeFiles/vdb-encrypt.dir/build.make tools/external/vdb-decrypt/CMakeFiles/vdb-encrypt.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-decrypt /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-decrypt /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-decrypt/CMakeFiles/vdb-encrypt.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/vdb-decrypt/CMakeFiles/vdb-encrypt.dir/build.make tools/external/vdb-decrypt/CMakeFiles/vdb-encrypt.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 55%] Building C object tools/external/vdb-decrypt/CMakeFiles/vdb-encrypt.dir/vdb-encrypt.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-decrypt && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-decrypt\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-decrypt/CMakeFiles/vdb-encrypt.dir/vdb-encrypt.c.o -MF CMakeFiles/vdb-encrypt.dir/vdb-encrypt.c.o.d -o CMakeFiles/vdb-encrypt.dir/vdb-encrypt.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-decrypt/vdb-encrypt.c
[ 55%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/err_msg.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/err_msg.c.o -MF CMakeFiles/fasterq-dump.dir/err_msg.c.o.d -o CMakeFiles/fasterq-dump.dir/err_msg.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/err_msg.c
[ 56%] Building CXX object tools/loaders/general-loader/CMakeFiles/general-loader.dir/main.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/loaders/general-loader/CMakeFiles/general-loader.dir/main.cpp.o -MF CMakeFiles/general-loader.dir/main.cpp.o.d -o CMakeFiles/general-loader.dir/main.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/main.cpp
[ 56%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/walk_debug.c.o
[ 56%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_label.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_label.c.o -MF CMakeFiles/tui.dir/tui_widget_label.c.o.d -o CMakeFiles/tui.dir/tui_widget_label.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/tui_widget_label.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/walk_debug.c.o -MF CMakeFiles/sra-pileup.dir/walk_debug.c.o.d -o CMakeFiles/sra-pileup.dir/walk_debug.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/walk_debug.c
[ 56%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/file_tools.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/file_tools.c.o -MF CMakeFiles/fasterq-dump.dir/file_tools.c.o.d -o CMakeFiles/fasterq-dump.dir/file_tools.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/file_tools.c
[ 56%] Building C object tools/external/vdb-decrypt/CMakeFiles/vdb-encrypt.dir/shared.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-decrypt && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-decrypt\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-decrypt/CMakeFiles/vdb-encrypt.dir/shared.c.o -MF CMakeFiles/vdb-encrypt.dir/shared.c.o.d -o CMakeFiles/vdb-encrypt.dir/shared.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-decrypt/shared.c
[ 56%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/matecache.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/matecache.c.o -MF CMakeFiles/sam-dump.dir/matecache.c.o.d -o CMakeFiles/sam-dump.dir/matecache.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/matecache.c
[ 56%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_progress.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_progress.c.o -MF CMakeFiles/tui.dir/tui_widget_progress.c.o.d -o CMakeFiles/tui.dir/tui_widget_progress.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/tui_widget_progress.c
[ 57%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/pileup_counters.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/pileup_counters.c.o -MF CMakeFiles/sra-pileup.dir/pileup_counters.c.o.d -o CMakeFiles/sra-pileup.dir/pileup_counters.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/pileup_counters.c
[ 57%] Linking CXX executable ../../../bin/vdb-decrypt
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-decrypt && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-decrypt.dir/link.txt --verbose=1
[ 57%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/var_fmt.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/var_fmt.c.o -MF CMakeFiles/fasterq-dump.dir/var_fmt.c.o.d -o CMakeFiles/fasterq-dump.dir/var_fmt.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/var_fmt.c
[ 57%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_radiobox.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_radiobox.c.o -MF CMakeFiles/tui.dir/tui_widget_radiobox.c.o.d -o CMakeFiles/tui.dir/tui_widget_radiobox.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/tui_widget_radiobox.c
[ 57%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/read_fkt.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/read_fkt.c.o -MF CMakeFiles/sam-dump.dir/read_fkt.c.o.d -o CMakeFiles/sam-dump.dir/read_fkt.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/read_fkt.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-decrypt.dir/link.d "CMakeFiles/vdb-decrypt.dir/vdb-decrypt.c.o" "CMakeFiles/vdb-decrypt.dir/shared.c.o" -o ../../../bin/vdb-decrypt  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f vdb-decrypt.3.2.1
[ 57%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/pileup_index.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv vdb-decrypt vdb-decrypt.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/pileup_index.c.o -MF CMakeFiles/sra-pileup.dir/pileup_index.c.o.d -o CMakeFiles/sra-pileup.dir/pileup_index.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/pileup_index.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-decrypt.3.2.1 vdb-decrypt.3
[ 57%] Linking CXX executable ../../../bin/vdb-encrypt
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-decrypt.3 vdb-decrypt
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-decrypt && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-encrypt.dir/link.txt --verbose=1
[ 57%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_spin_edit.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_spin_edit.c.o -MF CMakeFiles/tui.dir/tui_widget_spin_edit.c.o.d -o CMakeFiles/tui.dir/tui_widget_spin_edit.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/tui_widget_spin_edit.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 57%] Linking CXX executable ../../../bin/check-corrupt
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-validate && /usr/bin/cmake -E cmake_link_script CMakeFiles/check-corrupt.dir/link.txt --verbose=1
[ 57%] Built target vdb-decrypt
make  -f tools/external/srapath/CMakeFiles/srapath.dir/build.make tools/external/srapath/CMakeFiles/srapath.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/srapath /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/srapath /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/srapath/CMakeFiles/srapath.dir/DependInfo.cmake "--color="
[ 57%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/pileup_indels.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/pileup_indels.c.o -MF CMakeFiles/sra-pileup.dir/pileup_indels.c.o.d -o CMakeFiles/sra-pileup.dir/pileup_indels.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/pileup_indels.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/srapath/CMakeFiles/srapath.dir/build.make tools/external/srapath/CMakeFiles/srapath.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 57%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/flex_printer.c.o
[ 57%] Building C object tools/external/srapath/CMakeFiles/srapath.dir/helper.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/srapath && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/srapath\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/srapath/CMakeFiles/srapath.dir/helper.c.o -MF CMakeFiles/srapath.dir/helper.c.o.d -o CMakeFiles/srapath.dir/helper.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/srapath/helper.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/flex_printer.c.o -MF CMakeFiles/fasterq-dump.dir/flex_printer.c.o.d -o CMakeFiles/fasterq-dump.dir/flex_printer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/flex_printer.c
[ 57%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_string_list.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_string_list.c.o -MF CMakeFiles/tui.dir/tui_widget_string_list.c.o.d -o CMakeFiles/tui.dir/tui_widget_string_list.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/tui_widget_string_list.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/check-corrupt.dir/link.d "CMakeFiles/check-corrupt.dir/check-corrupt.cpp.o" -o ../../../bin/check-corrupt  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f check-corrupt.3.2.1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-encrypt.dir/link.d "CMakeFiles/vdb-encrypt.dir/vdb-encrypt.c.o" "CMakeFiles/vdb-encrypt.dir/shared.c.o" -o ../../../bin/vdb-encrypt  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f vdb-encrypt.3.2.1
[ 57%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/pileup_varcount.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv check-corrupt check-corrupt.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/pileup_varcount.c.o -MF CMakeFiles/sra-pileup.dir/pileup_varcount.c.o.d -o CMakeFiles/sra-pileup.dir/pileup_varcount.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/pileup_varcount.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv vdb-encrypt vdb-encrypt.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s check-corrupt.3.2.1 check-corrupt.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s check-corrupt.3 check-corrupt
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-encrypt.3.2.1 vdb-encrypt.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-encrypt.3 vdb-encrypt
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 57%] Built target check-corrupt
make  -f tools/external/sra-stat/CMakeFiles/sra-stat.dir/build.make tools/external/sra-stat/CMakeFiles/sra-stat.dir/depend
[ 57%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_tabhdr.c.o
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-stat /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-stat /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-stat/CMakeFiles/sra-stat.dir/DependInfo.cmake "--color="
[ 57%] Built target vdb-encrypt
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/tui_widget_tabhdr.c.o -MF CMakeFiles/tui.dir/tui_widget_tabhdr.c.o.d -o CMakeFiles/tui.dir/tui_widget_tabhdr.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/tui_widget_tabhdr.c
[ 58%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-aligned.c.o
[ 58%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-str.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-aligned.c.o -MF CMakeFiles/sam-dump.dir/sam-aligned.c.o.d -o CMakeFiles/sam-dump.dir/sam-aligned.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/sam-aligned.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-str.c.o -MF CMakeFiles/vdb-dump.dir/vdb-dump-str.c.o.d -o CMakeFiles/vdb-dump.dir/vdb-dump-str.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump/vdb-dump-str.c
[ 58%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/pileup_stat.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/pileup_stat.c.o -MF CMakeFiles/sra-pileup.dir/pileup_stat.c.o.d -o CMakeFiles/sra-pileup.dir/pileup_stat.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/pileup_stat.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/sra-stat/CMakeFiles/sra-stat.dir/build.make tools/external/sra-stat/CMakeFiles/sra-stat.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 58%] Building C object tools/external/vdb-validate/CMakeFiles/vdb-validate.dir/check-redact.c.o
[ 58%] Building C object tools/external/sra-stat/CMakeFiles/sra-stat.dir/assembly-statistics.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-validate && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-validate\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-validate/CMakeFiles/vdb-validate.dir/check-redact.c.o -MF CMakeFiles/vdb-validate.dir/check-redact.c.o.d -o CMakeFiles/vdb-validate.dir/check-redact.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-validate/check-redact.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-stat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-stat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-stat/CMakeFiles/sra-stat.dir/assembly-statistics.c.o -MF CMakeFiles/sra-stat.dir/assembly-statistics.c.o.d -o CMakeFiles/sra-stat.dir/assembly-statistics.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-stat/assembly-statistics.c
[ 58%] Building C object tools/external/vdb-config/tui/CMakeFiles/tui.dir/linux/systui.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"libs/tui\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/.. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/tui/CMakeFiles/tui.dir/linux/systui.c.o -MF CMakeFiles/tui.dir/linux/systui.c.o.d -o CMakeFiles/tui.dir/linux/systui.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/tui/linux/systui.c
[ 58%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/temp_dir.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/temp_dir.c.o -MF CMakeFiles/fasterq-dump.dir/temp_dir.c.o.d -o CMakeFiles/fasterq-dump.dir/temp_dir.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/temp_dir.c
[ 59%] Linking CXX executable ../../../bin/vdb-validate
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-validate && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-validate.dir/link.txt --verbose=1
[ 59%] Building C object tools/external/srapath/CMakeFiles/srapath.dir/line_iter.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/srapath && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/srapath\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/srapath/CMakeFiles/srapath.dir/line_iter.c.o -MF CMakeFiles/srapath.dir/line_iter.c.o.d -o CMakeFiles/srapath.dir/line_iter.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/srapath/line_iter.c
[ 59%] Building C object tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/pileup_v2.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/pileup_v2.c.o -MF CMakeFiles/sra-pileup.dir/pileup_v2.c.o.d -o CMakeFiles/sra-pileup.dir/pileup_v2.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/pileup_v2.c
[ 59%] Linking CXX executable ../../../bin/general-loader
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/general-loader.dir/link.txt --verbose=1
[ 59%] Building C object tools/external/sra-stat/CMakeFiles/sra-stat.dir/sra.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-stat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-stat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-stat/CMakeFiles/sra-stat.dir/sra.c.o -MF CMakeFiles/sra-stat.dir/sra.c.o.d -o CMakeFiles/sra-stat.dir/sra.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-stat/sra.c
[ 59%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-helper.c.o
[ 59%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/progress_thread.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-helper.c.o -MF CMakeFiles/vdb-dump.dir/vdb-dump-helper.c.o.d -o CMakeFiles/vdb-dump.dir/vdb-dump-helper.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump/vdb-dump-helper.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/progress_thread.c.o -MF CMakeFiles/fasterq-dump.dir/progress_thread.c.o.d -o CMakeFiles/fasterq-dump.dir/progress_thread.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/progress_thread.c
[ 59%] Building C object tools/external/srapath/CMakeFiles/srapath.dir/repository-mgr.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/srapath && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/srapath\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/srapath/CMakeFiles/srapath.dir/repository-mgr.c.o -MF CMakeFiles/srapath.dir/repository-mgr.c.o.d -o CMakeFiles/srapath.dir/repository-mgr.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/srapath/repository-mgr.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-validate.dir/link.d "CMakeFiles/vdb-validate.dir/main.c.o" "CMakeFiles/vdb-validate.dir/vdb-validate.c.o" "CMakeFiles/vdb-validate.dir/check-redact.c.o" -o ../../../bin/vdb-validate  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f vdb-validate.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv vdb-validate vdb-validate.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-validate.3.2.1 vdb-validate.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-validate.3 vdb-validate
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[ 59%] Building C object tools/external/srapath/CMakeFiles/srapath.dir/services.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/srapath && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/srapath\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/srapath/CMakeFiles/srapath.dir/services.c.o -MF CMakeFiles/srapath.dir/services.c.o.d -o CMakeFiles/srapath.dir/services.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/srapath/services.c
[ 59%] Built target vdb-validate
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/rcexplain /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/rcexplain /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/rcexplain/CMakeFiles/rcexplain.dir/DependInfo.cmake "--color="
[ 59%] Building C object tools/external/sra-stat/CMakeFiles/sra-stat.dir/sra-stat.c.o
[ 60%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/cleanup_task.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-stat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-stat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-stat/CMakeFiles/sra-stat.dir/sra-stat.c.o -MF CMakeFiles/sra-stat.dir/sra-stat.c.o.d -o CMakeFiles/sra-stat.dir/sra-stat.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-stat/sra-stat.c
[ 61%] Linking C static library ../../../../ilib/libtui.a
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/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/general-loader.dir/link.d "CMakeFiles/general-loader.dir/general-loader.cpp.o" "CMakeFiles/general-loader.dir/protocol-parser.cpp.o" "CMakeFiles/general-loader.dir/database-loader.cpp.o" "CMakeFiles/general-loader.dir/main.cpp.o" -o ../../../bin/general-loader  ../../../ilib/libgeneral-writer.a ../../../ilib/libloader.a -lkapp ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/tui && /usr/bin/cmake -E cmake_link_script CMakeFiles/tui.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s general-loader.3.2.1 general-loader.3
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sra-pileup.dir/sra-pileup.c.o -MF CMakeFiles/sra-pileup.dir/sra-pileup.c.o.d -o CMakeFiles/sra-pileup.dir/sra-pileup.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/sra-pileup.c
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[ 61%] Building C object tools/external/rcexplain/CMakeFiles/rcexplain.dir/rcexplain.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/rcexplain && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/util\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/rcexplain/CMakeFiles/rcexplain.dir/rcexplain.c.o -MF CMakeFiles/rcexplain.dir/rcexplain.c.o.d -o CMakeFiles/rcexplain.dir/rcexplain.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/rcexplain/rcexplain.c
/usr/bin/ar qc ../../../../ilib/libtui.a CMakeFiles/tui.dir/dir_dlg.c.o CMakeFiles/tui.dir/eventring.c.o CMakeFiles/tui.dir/file_dlg.c.o CMakeFiles/tui.dir/line_policy.c.o CMakeFiles/tui.dir/screen.c.o CMakeFiles/tui.dir/string_cache.c.o CMakeFiles/tui.dir/tui.c.o CMakeFiles/tui.dir/tui_dlg.c.o CMakeFiles/tui.dir/tui_dlg_helper.c.o CMakeFiles/tui.dir/tui_menu.c.o CMakeFiles/tui.dir/tui_palette.c.o CMakeFiles/tui.dir/tui_std_dlg.c.o CMakeFiles/tui.dir/tui_widget.c.o CMakeFiles/tui.dir/tui_widget_button.c.o CMakeFiles/tui.dir/tui_widget_checkbox.c.o CMakeFiles/tui.dir/tui_widget_grid.c.o CMakeFiles/tui.dir/tui_widget_inputline.c.o CMakeFiles/tui.dir/tui_widget_label.c.o CMakeFiles/tui.dir/tui_widget_progress.c.o CMakeFiles/tui.dir/tui_widget_radiobox.c.o CMakeFiles/tui.dir/tui_widget_spin_edit.c.o CMakeFiles/tui.dir/tui_widget_string_list.c.o CMakeFiles/tui.dir/tui_widget_tabhdr.c.o CMakeFiles/tui.dir/linux/systui.c.o
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make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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[ 61%] Built target general-loader
make  -f tools/external/align-info/CMakeFiles/align-info.dir/build.make tools/external/align-info/CMakeFiles/align-info.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/align-info /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/align-info /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/align-info/CMakeFiles/align-info.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/test-sra /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/test-sra /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/test-sra/CMakeFiles/test-sra.dir/DependInfo.cmake "--color="
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 1416 |     ReportBuildDate( __DATE__ );
      |                      ^~~~~~~~
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 61%] Building C object tools/external/align-info/CMakeFiles/align-info.dir/align-info.c.o
[ 61%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/index.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/align-info && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/align-info\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/align-info/CMakeFiles/align-info.dir/align-info.c.o -MF CMakeFiles/align-info.dir/align-info.c.o.d -o CMakeFiles/align-info.dir/align-info.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/align-info/align-info.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/index.c.o -MF CMakeFiles/fasterq-dump.dir/index.c.o.d -o CMakeFiles/fasterq-dump.dir/index.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/index.c
[ 61%] Building C object tools/external/test-sra/CMakeFiles/test-sra.dir/test-sra.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/test-sra && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/test-sra\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/test-sra/. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/test-sra/CMakeFiles/test-sra.dir/test-sra.c.o -MF CMakeFiles/test-sra.dir/test-sra.c.o.d -o CMakeFiles/test-sra.dir/test-sra.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/test-sra/test-sra.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-stat/sra-stat.c: In function 'print_results':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-stat/sra-stat.c:3263:22: warning: unused variable 'rc_fmt' [-Wunused-variable]
 3263 |                 rc_t rc_fmt = formatLoadTime(ctx->info->loadTimestamp, buf, sizeof(buf), &sz);
      |                      ^~~~~~
[ 61%] Linking CXX executable ../../../bin/rcexplain
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[ 61%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/lookup_writer.c.o
[ 61%] Building C object tools/external/srapath/CMakeFiles/srapath.dir/cgi_request.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/srapath && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/srapath\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/srapath/CMakeFiles/srapath.dir/cgi_request.c.o -MF CMakeFiles/srapath.dir/cgi_request.c.o.d -o CMakeFiles/srapath.dir/cgi_request.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/srapath/cgi_request.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/lookup_writer.c.o -MF CMakeFiles/fasterq-dump.dir/lookup_writer.c.o.d -o CMakeFiles/fasterq-dump.dir/lookup_writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/lookup_writer.c
[ 61%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-formats.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-formats.c.o -MF CMakeFiles/vdb-dump.dir/vdb-dump-formats.c.o.d -o CMakeFiles/vdb-dump.dir/vdb-dump-formats.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump/vdb-dump-formats.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/rcexplain.dir/link.d CMakeFiles/rcexplain.dir/rcexplain.c.o -o ../../../bin/rcexplain  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f rcexplain.3.2.1
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/cache-mgr /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/cache-mgr /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/cache-mgr/CMakeFiles/cache-mgr.dir/DependInfo.cmake "--color="
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[ 61%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/lookup_reader.c.o
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/lookup_reader.c.o -MF CMakeFiles/fasterq-dump.dir/lookup_reader.c.o.d -o CMakeFiles/fasterq-dump.dir/lookup_reader.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/lookup_reader.c
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[ 61%] Building C object tools/external/cache-mgr/CMakeFiles/cache-mgr.dir/cache-mgr.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/cache-mgr && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/cache-mgr\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/cache-mgr/CMakeFiles/cache-mgr.dir/cache-mgr.c.o -MF CMakeFiles/cache-mgr.dir/cache-mgr.c.o.d -o CMakeFiles/cache-mgr.dir/cache-mgr.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/cache-mgr/cache-mgr.c
[ 61%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-redir.c.o
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[ 61%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-unaligned.c.o
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[ 61%] Building C object tools/external/srapath/CMakeFiles/srapath.dir/srapath.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/srapath && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/srapath\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/srapath/CMakeFiles/srapath.dir/srapath.c.o -MF CMakeFiles/srapath.dir/srapath.c.o.d -o CMakeFiles/srapath.dir/srapath.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/srapath/srapath.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/cache-mgr/cache-mgr.c: In function 'perform_report':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/cache-mgr/cache-mgr.c:702:16: warning: storing the address of local variable 'data' in '*octx.data' [-Wdangling-pointer=]
  702 |     octx->data = &data;
      |     ~~~~~~~~~~~^~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/cache-mgr/cache-mgr.c:699:17: note: 'data' declared here
  699 |     report_data data;
      |                 ^~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/cache-mgr/cache-mgr.c:696:41: note: 'octx' declared here
  696 | static rc_t perform_report( visit_ctx * octx )
      |                             ~~~~~~~~~~~~^~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/cache-mgr/cache-mgr.c: In function 'perform_unlock':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/cache-mgr/cache-mgr.c:905:16: warning: storing the address of local variable 'data' in '*octx.data' [-Wdangling-pointer=]
  905 |     octx->data = &data;
      |     ~~~~~~~~~~~^~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/cache-mgr/cache-mgr.c:902:17: note: 'data' declared here
  902 |     unlock_data data;
      |                 ^~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/cache-mgr/cache-mgr.c:899:41: note: 'octx' declared here
  899 | static rc_t perform_unlock( visit_ctx * octx )
      |                             ~~~~~~~~~~~~^~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/cache-mgr/cache-mgr.c: In function 'perform_clear':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/cache-mgr/cache-mgr.c:990:16: warning: storing the address of local variable 'data' in '*octx.data' [-Wdangling-pointer=]
  990 |     octx->data = &data;
      |     ~~~~~~~~~~~^~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/cache-mgr/cache-mgr.c:987:16: note: 'data' declared here
  987 |     clear_data data;
      |                ^~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/cache-mgr/cache-mgr.c:984:40: note: 'octx' declared here
  984 | static rc_t perform_clear( visit_ctx * octx )
      |                            ~~~~~~~~~~~~^~~~
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/align-info.dir/link.d "CMakeFiles/align-info.dir/align-info.c.o" -o ../../../bin/align-info  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f align-info.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv align-info align-info.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s align-info.3.2.1 align-info.3
[ 61%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/locked_file_list.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/locked_file_list.c.o -MF CMakeFiles/fasterq-dump.dir/locked_file_list.c.o.d -o CMakeFiles/fasterq-dump.dir/locked_file_list.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/locked_file_list.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s align-info.3 align-info
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 61%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-fastq.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-fastq.c.o -MF CMakeFiles/vdb-dump.dir/vdb-dump-fastq.c.o.d -o CMakeFiles/vdb-dump.dir/vdb-dump-fastq.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump/vdb-dump-fastq.c
[ 61%] Built target align-info
make  -f tools/external/driver-tool/CMakeFiles/sratools.dir/build.make tools/external/driver-tool/CMakeFiles/sratools.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool/CMakeFiles/sratools.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 61%] Linking CXX executable ../../../bin/sra-pileup
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cmake -E cmake_link_script CMakeFiles/sra-pileup.dir/link.txt --verbose=1
[ 61%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/sratools.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DBUILD_PATH=\"/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin\" -DLINUX -DNDEBUG -DPREFIX_PATH=\"\" -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/sratools.cpp.o -MF CMakeFiles/sratools.dir/sratools.cpp.o.d -o CMakeFiles/sratools.dir/sratools.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/sratools.cpp
[ 61%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/locked_value.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/locked_value.c.o -MF CMakeFiles/fasterq-dump.dir/locked_value.c.o.d -o CMakeFiles/fasterq-dump.dir/locked_value.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/locked_value.c
[ 61%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-view-spec.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-view-spec.c.o -MF CMakeFiles/vdb-dump.dir/vdb-dump-view-spec.c.o.d -o CMakeFiles/vdb-dump.dir/vdb-dump-view-spec.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump/vdb-dump-view-spec.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sra-pileup.dir/link.d "CMakeFiles/sra-pileup.dir/dyn_string.c.o" "CMakeFiles/sra-pileup.dir/cmdline_cmn.c.o" "CMakeFiles/sra-pileup.dir/out_redir.c.o" "CMakeFiles/sra-pileup.dir/perf_log.c.o" "CMakeFiles/sra-pileup.dir/reref.c.o" "CMakeFiles/sra-pileup.dir/cg_tools.c.o" "CMakeFiles/sra-pileup.dir/report_deletes.c.o" "CMakeFiles/sra-pileup.dir/ref_regions.c.o" "CMakeFiles/sra-pileup.dir/4na_ascii.c.o" "CMakeFiles/sra-pileup.dir/ref_walker_0.c.o" "CMakeFiles/sra-pileup.dir/ref_walker.c.o" "CMakeFiles/sra-pileup.dir/walk_debug.c.o" "CMakeFiles/sra-pileup.dir/pileup_counters.c.o" "CMakeFiles/sra-pileup.dir/pileup_index.c.o" "CMakeFiles/sra-pileup.dir/pileup_indels.c.o" "CMakeFiles/sra-pileup.dir/pileup_varcount.c.o" "CMakeFiles/sra-pileup.dir/pileup_stat.c.o" "CMakeFiles/sra-pileup.dir/pileup_v2.c.o" "CMakeFiles/sra-pileup.dir/sra-pileup.c.o" -o ../../../bin/sra-pileup  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f sra-pileup.3.2.1
[ 61%] Linking CXX executable ../../../bin/srapath
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv sra-pileup sra-pileup.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/srapath && /usr/bin/cmake -E cmake_link_script CMakeFiles/srapath.dir/link.txt --verbose=1
[ 61%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/file_printer.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-pileup.3.2.1 sra-pileup.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/file_printer.c.o -MF CMakeFiles/fasterq-dump.dir/file_printer.c.o.d -o CMakeFiles/fasterq-dump.dir/file_printer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/file_printer.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-pileup.3 sra-pileup
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sratools.3.2.1 sra-pileup-driver
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 61%] Built target sra-pileup
make  -f tools/external/sra-info/CMakeFiles/sra-info.dir/build.make tools/external/sra-info/CMakeFiles/sra-info.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-info /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-info /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-info/CMakeFiles/sra-info.dir/DependInfo.cmake "--color="
[ 61%] Linking CXX executable ../../../bin/cache-mgr
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/cache-mgr && /usr/bin/cmake -E cmake_link_script CMakeFiles/cache-mgr.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/sra-info/CMakeFiles/sra-info.dir/build.make tools/external/sra-info/CMakeFiles/sra-info.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 61%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-inspect.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump-inspect.c.o -MF CMakeFiles/vdb-dump.dir/vdb-dump-inspect.c.o.d -o CMakeFiles/vdb-dump.dir/vdb-dump-inspect.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump/vdb-dump-inspect.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/srapath.dir/link.d CMakeFiles/srapath.dir/helper.c.o CMakeFiles/srapath.dir/line_iter.c.o "CMakeFiles/srapath.dir/repository-mgr.c.o" CMakeFiles/srapath.dir/services.c.o CMakeFiles/srapath.dir/cgi_request.c.o CMakeFiles/srapath.dir/srapath.c.o -o ../../../bin/srapath  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f srapath.3.2.1
[ 61%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/merge_sorter.c.o
[ 61%] Building CXX object tools/external/sra-info/CMakeFiles/sra-info.dir/main.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/merge_sorter.c.o -MF CMakeFiles/fasterq-dump.dir/merge_sorter.c.o.d -o CMakeFiles/fasterq-dump.dir/merge_sorter.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/merge_sorter.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv srapath srapath.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-info && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-info\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-info/CMakeFiles/sra-info.dir/main.cpp.o -MF CMakeFiles/sra-info.dir/main.cpp.o.d -o CMakeFiles/sra-info.dir/main.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-info/main.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s srapath.3.2.1 srapath.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s srapath.3 srapath
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sratools.3.2.1 srapath-driver
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 61%] Built target srapath
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/cache-mgr.dir/link.d "CMakeFiles/cache-mgr.dir/cache-mgr.c.o" -o ../../../bin/cache-mgr  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make  -f tools/internal/align-cache/CMakeFiles/align-cache.dir/build.make tools/internal/align-cache/CMakeFiles/align-cache.dir/depend
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f cache-mgr.3.2.1
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/align-cache /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/align-cache /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/align-cache/CMakeFiles/align-cache.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv cache-mgr cache-mgr.3.2.1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/align-cache/CMakeFiles/align-cache.dir/build.make tools/internal/align-cache/CMakeFiles/align-cache.dir/build
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s cache-mgr.3.2.1 cache-mgr.3
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s cache-mgr.3 cache-mgr
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 61%] Building CXX object tools/internal/align-cache/CMakeFiles/align-cache.dir/align-cache.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/align-cache && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/align-cache\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/internal/align-cache/CMakeFiles/align-cache.dir/align-cache.cpp.o -MF CMakeFiles/align-cache.dir/align-cache.cpp.o.d -o CMakeFiles/align-cache.dir/align-cache.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/align-cache/align-cache.cpp
[ 61%] Built target cache-mgr
[ 61%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/md_flag.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/md_flag.c.o -MF CMakeFiles/sam-dump.dir/md_flag.c.o.d -o CMakeFiles/sam-dump.dir/md_flag.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/md_flag.c
make  -f tools/internal/ccextract/CMakeFiles/ccextract.dir/build.make tools/internal/ccextract/CMakeFiles/ccextract.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/ccextract /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/ccextract /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/ccextract/CMakeFiles/ccextract.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/ccextract/CMakeFiles/ccextract.dir/build.make tools/internal/ccextract/CMakeFiles/ccextract.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 61%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb_info.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb_info.c.o -MF CMakeFiles/vdb-dump.dir/vdb_info.c.o.d -o CMakeFiles/vdb-dump.dir/vdb_info.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump/vdb_info.c
[ 61%] Building C object tools/internal/ccextract/CMakeFiles/ccextract.dir/ccextract.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/ccextract && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/ccextract\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/ccextract/CMakeFiles/ccextract.dir/ccextract.c.o -MF CMakeFiles/ccextract.dir/ccextract.c.o.d -o CMakeFiles/ccextract.dir/ccextract.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/ccextract/ccextract.c
[ 61%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/sorter.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/sorter.c.o -MF CMakeFiles/fasterq-dump.dir/sorter.c.o.d -o CMakeFiles/fasterq-dump.dir/sorter.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/sorter.c
[ 61%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/cg_tools.c.o
[ 61%] Building C object tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/cg_tools.c.o -MF CMakeFiles/sam-dump.dir/cg_tools.c.o.d -o CMakeFiles/sam-dump.dir/cg_tools.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/cg_tools.c
In file included from /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/sratools.hpp:31,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/sratools.cpp:59:
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/accession.hpp: In static member function 'static const char* sratools::Accession::qualityTypeFor(const char*)':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/accession.hpp:82:56: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                                                        ^
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-dump/CMakeFiles/vdb-dump.dir/vdb-dump.c.o -MF CMakeFiles/vdb-dump.dir/vdb-dump.c.o.d -o CMakeFiles/vdb-dump.dir/vdb-dump.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump/vdb-dump.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/accession.hpp:82:38: note: the temporary was destroyed at the end of the full expression 'make_sequence<const char**>((& sratools::Accession::extensions[1]), 3)'
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                         ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 62%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/cmn_iter.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/cmn_iter.c.o -MF CMakeFiles/fasterq-dump.dir/cmn_iter.c.o.d -o CMakeFiles/fasterq-dump.dir/cmn_iter.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/cmn_iter.c
[ 63%] Linking CXX executable ../../../bin/ccextract
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/ccextract && /usr/bin/cmake -E cmake_link_script CMakeFiles/ccextract.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/ccextract.dir/link.d CMakeFiles/ccextract.dir/ccextract.c.o -o ../../../bin/ccextract  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a ../../../ilib/libkxml.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libxml2.so
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f ccextract.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv ccextract ccextract.3.2.1
[ 63%] Building C object tools/external/test-sra/CMakeFiles/test-sra.dir/unix/PrintOS.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s ccextract.3.2.1 ccextract.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/test-sra && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/test-sra\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/test-sra/. -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/test-sra/CMakeFiles/test-sra.dir/unix/PrintOS.c.o -MF CMakeFiles/test-sra.dir/unix/PrintOS.c.o.d -o CMakeFiles/test-sra.dir/unix/PrintOS.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/test-sra/unix/PrintOS.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s ccextract.3 ccextract
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 63%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/raw_read_iter.c.o
[ 63%] Built target ccextract
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/raw_read_iter.c.o -MF CMakeFiles/fasterq-dump.dir/raw_read_iter.c.o.d -o CMakeFiles/fasterq-dump.dir/raw_read_iter.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/raw_read_iter.c
make  -f tools/internal/check-redact/CMakeFiles/check-redact.dir/build.make tools/internal/check-redact/CMakeFiles/check-redact.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/check-redact /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/check-redact /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/check-redact/CMakeFiles/check-redact.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 63%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-dump.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-dump.c.o -MF CMakeFiles/sam-dump.dir/sam-dump.c.o.d -o CMakeFiles/sam-dump.dir/sam-dump.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/sam-dump.c
[ 63%] Building C object tools/internal/check-redact/CMakeFiles/check-redact.dir/check-redact.c.o
[ 63%] Linking CXX executable ../../../bin/test-sra
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/check-redact && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/check-redact\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/check-redact/CMakeFiles/check-redact.dir/check-redact.c.o -MF CMakeFiles/check-redact.dir/check-redact.c.o.d -o CMakeFiles/check-redact.dir/check-redact.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/check-redact/check-redact.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/test-sra && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-sra.dir/link.txt --verbose=1
[ 63%] Building CXX object tools/internal/align-cache/CMakeFiles/align-cache.dir/helper.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/align-cache && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/align-cache\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/internal/align-cache/CMakeFiles/align-cache.dir/helper.cpp.o -MF CMakeFiles/align-cache.dir/helper.cpp.o.d -o CMakeFiles/align-cache.dir/helper.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/align-cache/helper.cpp
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/sam-dump.c: In function 'SAM_Dump_Main':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/sam-dump.c:4387:22: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
 4387 |     ReportBuildDate( __DATE__ );
      |                      ^~~~~~~~
[ 63%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/special_iter.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/special_iter.c.o -MF CMakeFiles/fasterq-dump.dir/special_iter.c.o.d -o CMakeFiles/fasterq-dump.dir/special_iter.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/special_iter.c
[ 63%] Building CXX object tools/external/sra-info/CMakeFiles/sra-info.dir/sra-info.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-info && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-info\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-info/CMakeFiles/sra-info.dir/sra-info.cpp.o -MF CMakeFiles/sra-info.dir/sra-info.cpp.o.d -o CMakeFiles/sra-info.dir/sra-info.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-info/sra-info.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-sra.dir/link.d "CMakeFiles/test-sra.dir/test-sra.c.o" "CMakeFiles/test-sra.dir/unix/PrintOS.c.o" -o ../../../bin/test-sra  ../../../ilib/libascp.a ../../../ilib/libdiagnose.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f test-sra.3.2.1
[ 63%] Linking CXX executable ../../../bin/check-redact
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/check-redact && /usr/bin/cmake -E cmake_link_script CMakeFiles/check-redact.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv test-sra test-sra.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s test-sra.3.2.1 test-sra.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s test-sra.3 test-sra
[ 63%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/fq_seq_ua_iter.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/fq_seq_ua_iter.c.o -MF CMakeFiles/fasterq-dump.dir/fq_seq_ua_iter.c.o.d -o CMakeFiles/fasterq-dump.dir/fq_seq_ua_iter.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/fq_seq_ua_iter.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 63%] Built target test-sra
make  -f tools/internal/compute-coverage/CMakeFiles/compute-coverage.dir/build.make tools/internal/compute-coverage/CMakeFiles/compute-coverage.dir/depend
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/compute-coverage /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/compute-coverage /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/compute-coverage/CMakeFiles/compute-coverage.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 63%] Building CXX object tools/internal/compute-coverage/CMakeFiles/compute-coverage.dir/compute-coverage.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/compute-coverage && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/internal/compute-coverage/CMakeFiles/compute-coverage.dir/compute-coverage.cpp.o -MF CMakeFiles/compute-coverage.dir/compute-coverage.cpp.o.d -o CMakeFiles/compute-coverage.dir/compute-coverage.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/compute-coverage/compute-coverage.cpp
[ 63%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/fq_seq_csra_iter.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/fq_seq_csra_iter.c.o -MF CMakeFiles/fasterq-dump.dir/fq_seq_csra_iter.c.o.d -o CMakeFiles/fasterq-dump.dir/fq_seq_csra_iter.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/fq_seq_csra_iter.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/check-redact.dir/link.d "CMakeFiles/check-redact.dir/check-redact.c.o" -o ../../../bin/check-redact  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f check-redact.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv check-redact check-redact.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s check-redact.3.2.1 check-redact.3
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make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 63%] Built target check-redact
make  -f tools/internal/copycat/CMakeFiles/copycat.dir/build.make tools/internal/copycat/CMakeFiles/copycat.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat/CMakeFiles/copycat.dir/DependInfo.cmake "--color="
[ 64%] Linking CXX executable ../../../bin/vdb-dump
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-dump && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-dump.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/copycat/CMakeFiles/copycat.dir/build.make tools/internal/copycat/CMakeFiles/copycat.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 64%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/align_iter.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/align_iter.c.o -MF CMakeFiles/fasterq-dump.dir/align_iter.c.o.d -o CMakeFiles/fasterq-dump.dir/align_iter.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/align_iter.c
[ 64%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/copycat.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/copycat.c.o -MF CMakeFiles/copycat.dir/copycat.c.o.d -o CMakeFiles/copycat.dir/copycat.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/copycat.c
[ 64%] Building CXX object tools/external/sra-info/CMakeFiles/sra-info.dir/formatter.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-info && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-info\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-info/CMakeFiles/sra-info.dir/formatter.cpp.o -MF CMakeFiles/sra-info.dir/formatter.cpp.o.d -o CMakeFiles/sra-info.dir/formatter.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-info/formatter.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-dump.dir/link.d "CMakeFiles/vdb-dump.dir/vdb-dump-context.c.o" "CMakeFiles/vdb-dump.dir/vdb-dump-coldefs.c.o" "CMakeFiles/vdb-dump.dir/vdb-dump-tools.c.o" "CMakeFiles/vdb-dump.dir/vdb-dump-str.c.o" "CMakeFiles/vdb-dump.dir/vdb-dump-helper.c.o" "CMakeFiles/vdb-dump.dir/vdb-dump-formats.c.o" "CMakeFiles/vdb-dump.dir/vdb-dump-redir.c.o" "CMakeFiles/vdb-dump.dir/vdb-dump-fastq.c.o" "CMakeFiles/vdb-dump.dir/vdb-dump-view-spec.c.o" "CMakeFiles/vdb-dump.dir/vdb-dump-inspect.c.o" "CMakeFiles/vdb-dump.dir/vdb_info.c.o" "CMakeFiles/vdb-dump.dir/vdb-dump.c.o" -o ../../../bin/vdb-dump  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f vdb-dump.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv vdb-dump vdb-dump.3.2.1
[ 64%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/simple_fasta_iter.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/simple_fasta_iter.c.o -MF CMakeFiles/fasterq-dump.dir/simple_fasta_iter.c.o.d -o CMakeFiles/fasterq-dump.dir/simple_fasta_iter.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/simple_fasta_iter.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-dump.3.2.1 vdb-dump.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-dump.3 vdb-dump
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sratools.3.2.1 vdb-dump-driver
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 64%] Built target vdb-dump
make  -f tools/internal/make-read-filter/CMakeFiles/make-read-filter.dir/build.make tools/internal/make-read-filter/CMakeFiles/make-read-filter.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/make-read-filter /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/make-read-filter /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/make-read-filter/CMakeFiles/make-read-filter.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/make-read-filter/CMakeFiles/make-read-filter.dir/build.make tools/internal/make-read-filter/CMakeFiles/make-read-filter.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 64%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/db_join.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/db_join.c.o -MF CMakeFiles/fasterq-dump.dir/db_join.c.o.d -o CMakeFiles/fasterq-dump.dir/db_join.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/db_join.c
[ 65%] Building C object tools/internal/make-read-filter/CMakeFiles/make-read-filter.dir/make-read-filter.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/make-read-filter && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -Wno-unused-result -MD -MT tools/internal/make-read-filter/CMakeFiles/make-read-filter.dir/make-read-filter.c.o -MF CMakeFiles/make-read-filter.dir/make-read-filter.c.o.d -o CMakeFiles/make-read-filter.dir/make-read-filter.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/make-read-filter/make-read-filter.c
[ 65%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/ccfileformat.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/ccfileformat.c.o -MF CMakeFiles/copycat.dir/ccfileformat.c.o.d -o CMakeFiles/copycat.dir/ccfileformat.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/ccfileformat.c
[ 66%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/config.cpp.o
[ 66%] Linking CXX executable ../../../bin/align-cache
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DBUILD_PATH=\"/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin\" -DLINUX -DNDEBUG -DPREFIX_PATH=\"\" -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/config.cpp.o -MF CMakeFiles/sratools.dir/config.cpp.o.d -o CMakeFiles/sratools.dir/config.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/config.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/align-cache && /usr/bin/cmake -E cmake_link_script CMakeFiles/align-cache.dir/link.txt --verbose=1
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/ccfileformat.c: In function 'CCFileFormatIsFastq':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/ccfileformat.c:277:27: warning: 'seq_len' may be used uninitialized [-Wmaybe-uninitialized]
  277 |                         if(quality_values_len != seq_len)
      |                           ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/ccfileformat.c:195:12: note: 'seq_len' was declared here
  195 |     size_t seq_len,quality_values_len,seq_id_len;
      |            ^~~~~~~
[ 66%] Linking CXX executable ../../../bin/compute-coverage
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/compute-coverage && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute-coverage.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/align-cache.dir/link.d "CMakeFiles/align-cache.dir/align-cache.cpp.o" "CMakeFiles/align-cache.dir/helper.cpp.o" -o ../../../bin/align-cache  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f align-cache.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv align-cache align-cache.3.2.1
[ 66%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/cccat.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/cccat.c.o -MF CMakeFiles/copycat.dir/cccat.c.o.d -o CMakeFiles/copycat.dir/cccat.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/cccat.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s align-cache.3.2.1 align-cache.3
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/compute-coverage.dir/link.d "CMakeFiles/compute-coverage.dir/compute-coverage.cpp.o" -o ../../../bin/compute-coverage  ../../../ilib/libtk-version.a -lkapp /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f compute-coverage.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv compute-coverage compute-coverage.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s compute-coverage.3.2.1 compute-coverage.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s align-cache.3 align-cache
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s compute-coverage.3 compute-coverage
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 66%] Built target align-cache
make  -f tools/internal/md5cp/CMakeFiles/md5cp.dir/build.make tools/internal/md5cp/CMakeFiles/md5cp.dir/depend
[ 66%] Built target compute-coverage
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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make  -f tools/internal/meta-cmp/CMakeFiles/meta-cmp.dir/build.make tools/internal/meta-cmp/CMakeFiles/meta-cmp.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/meta-cmp /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-cmp /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-cmp/CMakeFiles/meta-cmp.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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make  -f tools/internal/meta-cmp/CMakeFiles/meta-cmp.dir/build.make tools/internal/meta-cmp/CMakeFiles/meta-cmp.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 66%] Building C object tools/internal/md5cp/CMakeFiles/md5cp.dir/md5cp.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/md5cp && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/md5cp/CMakeFiles/md5cp.dir/md5cp.c.o -MF CMakeFiles/md5cp.dir/md5cp.c.o.d -o CMakeFiles/md5cp.dir/md5cp.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/md5cp/md5cp.c
[ 66%] Building C object tools/internal/meta-cmp/CMakeFiles/meta-cmp.dir/meta-cmp.c.o
[ 67%] Linking CXX executable ../../../bin/sra-stat
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-stat && /usr/bin/cmake -E cmake_link_script CMakeFiles/sra-stat.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-cmp && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/meta-cmp\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/meta-cmp/CMakeFiles/meta-cmp.dir/meta-cmp.c.o -MF CMakeFiles/meta-cmp.dir/meta-cmp.c.o.d -o CMakeFiles/meta-cmp.dir/meta-cmp.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/meta-cmp/meta-cmp.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sra-stat.dir/link.d "CMakeFiles/sra-stat.dir/assembly-statistics.c.o" "CMakeFiles/sra-stat.dir/sra.c.o" "CMakeFiles/sra-stat.dir/sra-stat.c.o" -o ../../../bin/sra-stat  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f sra-stat.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv sra-stat sra-stat.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-stat.3.2.1 sra-stat.3
[ 67%] Linking CXX executable ../../../bin/meta-cmp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-cmp && /usr/bin/cmake -E cmake_link_script CMakeFiles/meta-cmp.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-stat.3 sra-stat
[ 67%] Linking CXX executable ../../../bin/make-read-filter
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/make-read-filter && /usr/bin/cmake -E cmake_link_script CMakeFiles/make-read-filter.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 67%] Built target sra-stat
make  -f tools/internal/meta-copy/CMakeFiles/meta-copy.dir/build.make tools/internal/meta-copy/CMakeFiles/meta-copy.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/meta-copy /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-copy /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-copy/CMakeFiles/meta-copy.dir/DependInfo.cmake "--color="
[ 67%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/cctree.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/cctree.c.o -MF CMakeFiles/copycat.dir/cctree.c.o.d -o CMakeFiles/copycat.dir/cctree.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/cctree.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 67%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/command-line.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DBUILD_PATH=\"/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin\" -DLINUX -DNDEBUG -DPREFIX_PATH=\"\" -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/command-line.cpp.o -MF CMakeFiles/sratools.dir/command-line.cpp.o.d -o CMakeFiles/sratools.dir/command-line.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/command-line.cpp
[ 67%] Building C object tools/internal/meta-copy/CMakeFiles/meta-copy.dir/meta-copy.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-copy && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/meta-copy\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/meta-copy/CMakeFiles/meta-copy.dir/meta-copy.c.o -MF CMakeFiles/meta-copy.dir/meta-copy.c.o.d -o CMakeFiles/meta-copy.dir/meta-copy.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/meta-copy/meta-copy.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/make-read-filter.dir/link.d "CMakeFiles/make-read-filter.dir/make-read-filter.c.o" -o ../../../bin/make-read-filter  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f make-read-filter.3.2.1
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[ 67%] Linking CXX executable ../../../bin/md5cp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/md5cp && /usr/bin/cmake -E cmake_link_script CMakeFiles/md5cp.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s make-read-filter.3.2.1 make-read-filter.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s make-read-filter.3 make-read-filter
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 67%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-dump3.c.o
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/meta-cmp.dir/link.d "CMakeFiles/meta-cmp.dir/meta-cmp.c.o" -o ../../../bin/meta-cmp  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f meta-cmp.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/sam-dump3.c.o -MF CMakeFiles/sam-dump.dir/sam-dump3.c.o.d -o CMakeFiles/sam-dump.dir/sam-dump3.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/sam-dump3.c
[ 67%] Built target make-read-filter
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv meta-cmp meta-cmp.3.2.1
make  -f tools/internal/meta-repair/CMakeFiles/meta-repair.dir/build.make tools/internal/meta-repair/CMakeFiles/meta-repair.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/meta-repair /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-repair /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-repair/CMakeFiles/meta-repair.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s meta-cmp.3.2.1 meta-cmp.3
[ 67%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/tbl_join.c.o
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/sam-dump3.c: In function 'KMain':
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s meta-cmp.3 meta-cmp
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/sam-dump3.c:557:38: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  557 |                     ReportBuildDate( __DATE__ );
      |                                      ^~~~~~~~
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/tbl_join.c.o -MF CMakeFiles/fasterq-dump.dir/tbl_join.c.o.d -o CMakeFiles/fasterq-dump.dir/tbl_join.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/tbl_join.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/meta-repair/CMakeFiles/meta-repair.dir/build.make tools/internal/meta-repair/CMakeFiles/meta-repair.dir/build
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 68%] Linking CXX executable ../../../bin/meta-copy
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-copy && /usr/bin/cmake -E cmake_link_script CMakeFiles/meta-copy.dir/link.txt --verbose=1
[ 68%] Building C object tools/internal/meta-repair/CMakeFiles/meta-repair.dir/meta-repair.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-repair && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/meta-repair\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/meta-repair/CMakeFiles/meta-repair.dir/meta-repair.c.o -MF CMakeFiles/meta-repair.dir/meta-repair.c.o.d -o CMakeFiles/meta-repair.dir/meta-repair.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/meta-repair/meta-repair.c
[ 68%] Built target meta-cmp
make  -f tools/internal/rd-filter-redact/CMakeFiles/test-read-write-cursor.dir/build.make tools/internal/rd-filter-redact/CMakeFiles/test-read-write-cursor.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/rd-filter-redact /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/rd-filter-redact /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/rd-filter-redact/CMakeFiles/test-read-write-cursor.dir/DependInfo.cmake "--color="
[ 68%] Building C object tools/external/sra-pileup/CMakeFiles/sam-dump.dir/dyn_string.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/sra-pileup/CMakeFiles/sam-dump.dir/dyn_string.c.o -MF CMakeFiles/sam-dump.dir/dyn_string.c.o.d -o CMakeFiles/sam-dump.dir/dyn_string.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-pileup/dyn_string.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/rd-filter-redact/CMakeFiles/test-read-write-cursor.dir/build.make tools/internal/rd-filter-redact/CMakeFiles/test-read-write-cursor.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 68%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/cctree-dump.c.o
[ 68%] Building C object tools/internal/rd-filter-redact/CMakeFiles/test-read-write-cursor.dir/test-read-write-cursor.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/cctree-dump.c.o -MF CMakeFiles/copycat.dir/cctree-dump.c.o.d -o CMakeFiles/copycat.dir/cctree-dump.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/cctree-dump.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/rd-filter-redact && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/rd-filter-redact\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/rd-filter-redact/CMakeFiles/test-read-write-cursor.dir/test-read-write-cursor.c.o -MF CMakeFiles/test-read-write-cursor.dir/test-read-write-cursor.c.o.d -o CMakeFiles/test-read-write-cursor.dir/test-read-write-cursor.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/rd-filter-redact/test-read-write-cursor.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/md5cp.dir/link.d CMakeFiles/md5cp.dir/md5cp.c.o -o ../../../bin/md5cp  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f md5cp.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv md5cp md5cp.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s md5cp.3.2.1 md5cp.3
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/cctree-dump.c:39:9: warning: "__USE_POSIX" redefined
   39 | #define __USE_POSIX
      |         ^~~~~~~~~~~
In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33,
                 from /usr/include/stdint.h:26,
                 from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9,
                 from /usr/include/ncbi-vdb/kfc/defs.h:34,
                 from /usr/include/ncbi-vdb/klib/defs.h:31,
                 from /usr/include/ncbi-vdb/klib/container.h:35,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/cctree-priv.h:31,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/cctree-dump.c:27:
/usr/include/features.h:348:10: note: this is the location of the previous definition
  348 | # define __USE_POSIX    1
      |          ^~~~~~~~~~~
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s md5cp.3 md5cp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/meta-copy.dir/link.d "CMakeFiles/meta-copy.dir/meta-copy.c.o" -o ../../../bin/meta-copy  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f meta-copy.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv meta-copy meta-copy.3.2.1
[ 68%] Built target md5cp
make  -f tools/internal/rd-filter-redact/CMakeFiles/read-filter-redact.dir/build.make tools/internal/rd-filter-redact/CMakeFiles/read-filter-redact.dir/depend
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s meta-copy.3.2.1 meta-copy.3
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/rd-filter-redact /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/rd-filter-redact /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/rd-filter-redact/CMakeFiles/read-filter-redact.dir/DependInfo.cmake "--color="
[ 68%] Linking CXX executable ../../../bin/sam-dump
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s meta-copy.3 meta-copy
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/rd-filter-redact/CMakeFiles/read-filter-redact.dir/build.make tools/internal/rd-filter-redact/CMakeFiles/read-filter-redact.dir/build
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-pileup && /usr/bin/cmake -E cmake_link_script CMakeFiles/sam-dump.dir/link.txt --verbose=1
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 68%] Building C object tools/internal/rd-filter-redact/CMakeFiles/read-filter-redact.dir/read-filter-redact.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/rd-filter-redact && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/rd-filter-redact\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/rd-filter-redact/CMakeFiles/read-filter-redact.dir/read-filter-redact.c.o -MF CMakeFiles/read-filter-redact.dir/read-filter-redact.c.o.d -o CMakeFiles/read-filter-redact.dir/read-filter-redact.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/rd-filter-redact/read-filter-redact.c
[ 68%] Built target meta-copy
make  -f tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/build.make tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-copy /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/build.make tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/rd-filter-redact/read-filter-redact.c: In function 'enter_date_name_vers':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/rd-filter-redact/read-filter-redact.c:755:59: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  755 |                 rc = KMDataNodeWriteAttr ( node, "build", __DATE__ );
      |                                                           ^~~~~~~~
[ 68%] Linking CXX executable ../../../bin/test-read-write-cursor
[ 68%] Building C object tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/context.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/rd-filter-redact && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-read-write-cursor.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-copy\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/context.c.o -MF CMakeFiles/vdb-copy.dir/context.c.o.d -o CMakeFiles/vdb-copy.dir/context.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-copy/context.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sam-dump.dir/link.d "CMakeFiles/sam-dump.dir/inputfiles.c.o" "CMakeFiles/sam-dump.dir/perf_log.c.o" "CMakeFiles/sam-dump.dir/rna_splice_log.c.o" "CMakeFiles/sam-dump.dir/sam-dump-opts.c.o" "CMakeFiles/sam-dump.dir/out_redir.c.o" "CMakeFiles/sam-dump.dir/sam-hdr.c.o" "CMakeFiles/sam-dump.dir/sam-hdr1.c.o" "CMakeFiles/sam-dump.dir/matecache.c.o" "CMakeFiles/sam-dump.dir/read_fkt.c.o" "CMakeFiles/sam-dump.dir/sam-aligned.c.o" "CMakeFiles/sam-dump.dir/sam-unaligned.c.o" "CMakeFiles/sam-dump.dir/md_flag.c.o" "CMakeFiles/sam-dump.dir/cg_tools.c.o" "CMakeFiles/sam-dump.dir/sam-dump.c.o" "CMakeFiles/sam-dump.dir/sam-dump3.c.o" "CMakeFiles/sam-dump.dir/dyn_string.c.o" -o ../../../bin/sam-dump  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f sam-dump.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv sam-dump sam-dump.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sam-dump.3.2.1 sam-dump.3
[ 68%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/cctar.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/cctar.c.o -MF CMakeFiles/copycat.dir/cctar.c.o.d -o CMakeFiles/copycat.dir/cctar.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/cctar.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-read-write-cursor.dir/link.d "CMakeFiles/test-read-write-cursor.dir/test-read-write-cursor.c.o" -o ../../../bin/test-read-write-cursor  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f test-read-write-cursor.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sam-dump.3 sam-dump
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv test-read-write-cursor test-read-write-cursor.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s test-read-write-cursor.3.2.1 test-read-write-cursor.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sratools.3.2.1 sam-dump-driver
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s test-read-write-cursor.3 test-read-write-cursor
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 68%] Linking CXX executable ../../../bin/meta-repair
[ 68%] Built target sam-dump
make  -f tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/build.make tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/depend
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/meta-repair && /usr/bin/cmake -E cmake_link_script CMakeFiles/meta-repair.dir/link.txt --verbose=1
[ 68%] Built target test-read-write-cursor
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-diff /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-diff /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/DependInfo.cmake "--color="
make  -f tools/test-tools/crc32sum/CMakeFiles/crc32sum.dir/build.make tools/test-tools/crc32sum/CMakeFiles/crc32sum.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/crc32sum /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/crc32sum /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/crc32sum/CMakeFiles/crc32sum.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/build.make tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 68%] Linking CXX executable ../../../bin/read-filter-redact
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/crc32sum/CMakeFiles/crc32sum.dir/build.make tools/test-tools/crc32sum/CMakeFiles/crc32sum.dir/build
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/rd-filter-redact && /usr/bin/cmake -E cmake_link_script CMakeFiles/read-filter-redact.dir/link.txt --verbose=1
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 68%] Building C object tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/namelist_tools.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-diff && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/vdb-diff\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/namelist_tools.c.o -MF CMakeFiles/vdb-diff.dir/namelist_tools.c.o.d -o CMakeFiles/vdb-diff.dir/namelist_tools.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-diff/namelist_tools.c
[ 68%] Building C object tools/test-tools/crc32sum/CMakeFiles/crc32sum.dir/crc32sum.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/crc32sum && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/crc32sum/CMakeFiles/crc32sum.dir/crc32sum.c.o -MF CMakeFiles/crc32sum.dir/crc32sum.c.o.d -o CMakeFiles/crc32sum.dir/crc32sum.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/crc32sum/crc32sum.c
[ 68%] Building C object tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/helper.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-copy\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/helper.c.o -MF CMakeFiles/vdb-copy.dir/helper.c.o.d -o CMakeFiles/vdb-copy.dir/helper.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-copy/helper.c
[ 68%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/temp_registry.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/temp_registry.c.o -MF CMakeFiles/fasterq-dump.dir/temp_registry.c.o.d -o CMakeFiles/fasterq-dump.dir/temp_registry.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/temp_registry.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/read-filter-redact.dir/link.d "CMakeFiles/read-filter-redact.dir/read-filter-redact.c.o" -o ../../../bin/read-filter-redact  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f read-filter-redact.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv read-filter-redact read-filter-redact.3.2.1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/meta-repair.dir/link.d "CMakeFiles/meta-repair.dir/meta-repair.c.o" -o ../../../bin/meta-repair  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s read-filter-redact.3.2.1 read-filter-redact.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f meta-repair.3.2.1
[ 68%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/ccsra.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/ccsra.c.o -MF CMakeFiles/copycat.dir/ccsra.c.o.d -o CMakeFiles/copycat.dir/ccsra.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/ccsra.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s read-filter-redact.3 read-filter-redact
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv meta-repair meta-repair.3.2.1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s meta-repair.3.2.1 meta-repair.3
[ 68%] Built target read-filter-redact
[ 69%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/copy_machine.c.o
make  -f tools/test-tools/test-download/CMakeFiles/test-download.dir/build.make tools/test-tools/test-download/CMakeFiles/test-download.dir/depend
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s meta-repair.3 meta-repair
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/copy_machine.c.o -MF CMakeFiles/fasterq-dump.dir/copy_machine.c.o.d -o CMakeFiles/fasterq-dump.dir/copy_machine.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/copy_machine.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/test-download /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/test-download /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/test-download/CMakeFiles/test-download.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/test-download/CMakeFiles/test-download.dir/build.make tools/test-tools/test-download/CMakeFiles/test-download.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 69%] Linking CXX executable ../../../bin/crc32sum
[ 69%] Built target meta-repair
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/crc32sum && /usr/bin/cmake -E cmake_link_script CMakeFiles/crc32sum.dir/link.txt --verbose=1
make  -f tools/test-tools/kdb-index/CMakeFiles/kdb-index.dir/build.make tools/test-tools/kdb-index/CMakeFiles/kdb-index.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/kdb-index /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/kdb-index /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/kdb-index/CMakeFiles/kdb-index.dir/DependInfo.cmake "--color="
[ 69%] Building C object tools/test-tools/test-download/CMakeFiles/test-download.dir/test-download.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/test-download && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/test-download/CMakeFiles/test-download.dir/test-download.c.o -MF CMakeFiles/test-download.dir/test-download.c.o.d -o CMakeFiles/test-download.dir/test-download.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/test-download/test-download.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/kdb-index/CMakeFiles/kdb-index.dir/build.make tools/test-tools/kdb-index/CMakeFiles/kdb-index.dir/build
[ 70%] Building C object tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/coldefs.c.o
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-diff && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/vdb-diff\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/coldefs.c.o -MF CMakeFiles/vdb-diff.dir/coldefs.c.o.d -o CMakeFiles/vdb-diff.dir/coldefs.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-diff/coldefs.c
[ 70%] Building C object tools/test-tools/kdb-index/CMakeFiles/kdb-index.dir/kdb-index.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/kdb-index && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/kdb-index/CMakeFiles/kdb-index.dir/kdb-index.c.o -MF CMakeFiles/kdb-index.dir/kdb-index.c.o.d -o CMakeFiles/kdb-index.dir/kdb-index.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/kdb-index/kdb-index.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/crc32sum.dir/link.d CMakeFiles/crc32sum.dir/crc32sum.c.o -o ../../../bin/crc32sum  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f crc32sum.3.2.1
[ 70%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/ccsubchunk.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/ccsubchunk.c.o -MF CMakeFiles/copycat.dir/ccsubchunk.c.o.d -o CMakeFiles/copycat.dir/ccsubchunk.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/ccsubchunk.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv crc32sum crc32sum.3.2.1
[ 70%] Building C object tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/vdb-diff-context.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-diff && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/vdb-diff\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/vdb-diff-context.c.o -MF CMakeFiles/vdb-diff.dir/vdb-diff-context.c.o.d -o CMakeFiles/vdb-diff.dir/vdb-diff-context.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-diff/vdb-diff-context.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s crc32sum.3.2.1 crc32sum.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s crc32sum.3 crc32sum
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 70%] Built target crc32sum
make  -f tools/test-tools/pacbio-correct/CMakeFiles/pacbio-correct.dir/build.make tools/test-tools/pacbio-correct/CMakeFiles/pacbio-correct.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 70%] Linking CXX executable ../../../bin/kdb-index
[ 70%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/multi_writer.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/pacbio-correct /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pacbio-correct /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pacbio-correct/CMakeFiles/pacbio-correct.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/multi_writer.c.o -MF CMakeFiles/fasterq-dump.dir/multi_writer.c.o.d -o CMakeFiles/fasterq-dump.dir/multi_writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/multi_writer.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/kdb-index && /usr/bin/cmake -E cmake_link_script CMakeFiles/kdb-index.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/pacbio-correct/CMakeFiles/pacbio-correct.dir/build.make tools/test-tools/pacbio-correct/CMakeFiles/pacbio-correct.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 71%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/ccfile.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/ccfile.c.o -MF CMakeFiles/copycat.dir/ccfile.c.o.d -o CMakeFiles/copycat.dir/ccfile.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/ccfile.c
[ 71%] Building C object tools/test-tools/pacbio-correct/CMakeFiles/pacbio-correct.dir/pacbio-correct.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pacbio-correct && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/pacbio-correct/CMakeFiles/pacbio-correct.dir/pacbio-correct.c.o -MF CMakeFiles/pacbio-correct.dir/pacbio-correct.c.o.d -o CMakeFiles/pacbio-correct.dir/pacbio-correct.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/pacbio-correct/pacbio-correct.c
[ 71%] Building C object tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/coldefs.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-copy\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/coldefs.c.o -MF CMakeFiles/vdb-copy.dir/coldefs.c.o.d -o CMakeFiles/vdb-copy.dir/coldefs.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-copy/coldefs.c
[ 71%] Building C object tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/cmn.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-diff && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/vdb-diff\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/cmn.c.o -MF CMakeFiles/vdb-diff.dir/cmn.c.o.d -o CMakeFiles/vdb-diff.dir/cmn.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-diff/cmn.c
[ 71%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/run-source.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DBUILD_PATH=\"/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin\" -DLINUX -DNDEBUG -DPREFIX_PATH=\"\" -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/run-source.cpp.o -MF CMakeFiles/sratools.dir/run-source.cpp.o.d -o CMakeFiles/sratools.dir/run-source.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/run-source.cpp
[ 71%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/kff/fileformat.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/kff/fileformat.c.o -MF CMakeFiles/copycat.dir/kff/fileformat.c.o.d -o CMakeFiles/copycat.dir/kff/fileformat.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/kff/fileformat.c
[ 71%] Linking CXX executable ../../../bin/test-download
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/test-download && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-download.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/kdb-index.dir/link.d "CMakeFiles/kdb-index.dir/kdb-index.c.o" -o ../../../bin/kdb-index  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f kdb-index.3.2.1
[ 71%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/concatenator.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/concatenator.c.o -MF CMakeFiles/fasterq-dump.dir/concatenator.c.o.d -o CMakeFiles/fasterq-dump.dir/concatenator.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/concatenator.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv kdb-index kdb-index.3.2.1
[ 71%] Linking CXX executable ../../../bin/pacbio-correct
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pacbio-correct && /usr/bin/cmake -E cmake_link_script CMakeFiles/pacbio-correct.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s kdb-index.3.2.1 kdb-index.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s kdb-index.3 kdb-index
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 71%] Built target kdb-index
make  -f tools/test-tools/schema-replace/CMakeFiles/schema-replace.dir/build.make tools/test-tools/schema-replace/CMakeFiles/schema-replace.dir/depend
[ 71%] Building C object tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/row_by_row.c.o
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/schema-replace /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/schema-replace /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/schema-replace/CMakeFiles/schema-replace.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-diff && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/vdb-diff\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/row_by_row.c.o -MF CMakeFiles/vdb-diff.dir/row_by_row.c.o.d -o CMakeFiles/vdb-diff.dir/row_by_row.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-diff/row_by_row.c
[ 71%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/ref_inventory.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/ref_inventory.c.o -MF CMakeFiles/fasterq-dump.dir/ref_inventory.c.o.d -o CMakeFiles/fasterq-dump.dir/ref_inventory.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/ref_inventory.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-download.dir/link.d "CMakeFiles/test-download.dir/test-download.c.o" -o ../../../bin/test-download  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f test-download.3.2.1
[ 71%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/kff/ffext.c.o
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/schema-replace/CMakeFiles/schema-replace.dir/build.make tools/test-tools/schema-replace/CMakeFiles/schema-replace.dir/build
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/kff/ffext.c.o -MF CMakeFiles/copycat.dir/kff/ffext.c.o.d -o CMakeFiles/copycat.dir/kff/ffext.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/kff/ffext.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv test-download test-download.3.2.1
[ 71%] Building C object tools/test-tools/schema-replace/CMakeFiles/schema-replace.dir/schema-replace.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/schema-replace && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/schema-replace/CMakeFiles/schema-replace.dir/schema-replace.c.o -MF CMakeFiles/schema-replace.dir/schema-replace.c.o.d -o CMakeFiles/schema-replace.dir/schema-replace.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/schema-replace/schema-replace.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s test-download.3.2.1 test-download.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s test-download.3 test-download
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/pacbio-correct.dir/link.d "CMakeFiles/pacbio-correct.dir/pacbio-correct.c.o" -o ../../../bin/pacbio-correct  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f pacbio-correct.3.2.1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv pacbio-correct pacbio-correct.3.2.1
[ 71%] Built target test-download
make  -f tools/test-tools/sortreadtest/CMakeFiles/sortreadtest.dir/build.make tools/test-tools/sortreadtest/CMakeFiles/sortreadtest.dir/depend
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s pacbio-correct.3.2.1 pacbio-correct.3
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/sortreadtest /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sortreadtest /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sortreadtest/CMakeFiles/sortreadtest.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s pacbio-correct.3 pacbio-correct
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/sortreadtest/CMakeFiles/sortreadtest.dir/build.make tools/test-tools/sortreadtest/CMakeFiles/sortreadtest.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 71%] Building C object tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/col_by_col.c.o
[ 71%] Built target pacbio-correct
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-diff && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/vdb-diff\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/col_by_col.c.o -MF CMakeFiles/vdb-diff.dir/col_by_col.c.o.d -o CMakeFiles/vdb-diff.dir/col_by_col.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-diff/col_by_col.c
make  -f tools/test-tools/rowwritetest/CMakeFiles/rowwritetest.dir/build.make tools/test-tools/rowwritetest/CMakeFiles/rowwritetest.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 71%] Building C object tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/get_platform.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-copy\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/get_platform.c.o -MF CMakeFiles/vdb-copy.dir/get_platform.c.o.d -o CMakeFiles/vdb-copy.dir/get_platform.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-copy/get_platform.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/rowwritetest /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/rowwritetest /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/rowwritetest/CMakeFiles/rowwritetest.dir/DependInfo.cmake "--color="
[ 71%] Building C object tools/test-tools/sortreadtest/CMakeFiles/sortreadtest.dir/sortreadtest.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sortreadtest && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/sortreadtest/CMakeFiles/sortreadtest.dir/sortreadtest.c.o -MF CMakeFiles/sortreadtest.dir/sortreadtest.c.o.d -o CMakeFiles/sortreadtest.dir/sortreadtest.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/sortreadtest/sortreadtest.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/rowwritetest/CMakeFiles/rowwritetest.dir/build.make tools/test-tools/rowwritetest/CMakeFiles/rowwritetest.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 71%] Linking CXX executable ../../../bin/schema-replace
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/schema-replace && /usr/bin/cmake -E cmake_link_script CMakeFiles/schema-replace.dir/link.txt --verbose=1
[ 71%] Building C object tools/test-tools/rowwritetest/CMakeFiles/rowwritetest.dir/rowwritetest.c.o
[ 71%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/kff/ffkey.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/rowwritetest && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/rowwritetest/CMakeFiles/rowwritetest.dir/rowwritetest.c.o -MF CMakeFiles/rowwritetest.dir/rowwritetest.c.o.d -o CMakeFiles/rowwritetest.dir/rowwritetest.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/rowwritetest/rowwritetest.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/kff/ffkey.c.o -MF CMakeFiles/copycat.dir/kff/ffkey.c.o.d -o CMakeFiles/copycat.dir/kff/ffkey.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/kff/ffkey.c
[ 71%] Building C object tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/vdb-diff.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-diff && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/vdb-diff\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-diff/CMakeFiles/vdb-diff.dir/vdb-diff.c.o -MF CMakeFiles/vdb-diff.dir/vdb-diff.c.o.d -o CMakeFiles/vdb-diff.dir/vdb-diff.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-diff/vdb-diff.c
[ 72%] Building C object tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/copy_meta.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-copy\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/copy_meta.c.o -MF CMakeFiles/vdb-copy.dir/copy_meta.c.o.d -o CMakeFiles/vdb-copy.dir/copy_meta.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-copy/copy_meta.c
[ 73%] Linking CXX executable ../../../bin/sortreadtest
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sortreadtest && /usr/bin/cmake -E cmake_link_script CMakeFiles/sortreadtest.dir/link.txt --verbose=1
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-copy/copy_meta.c: In function 'enter_date_name_vers':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-copy/copy_meta.c:301:59: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  301 |                 rc = KMDataNodeWriteAttr ( node, "build", __DATE__ );
      |                                                           ^~~~~~~~
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/schema-replace.dir/link.d "CMakeFiles/schema-replace.dir/schema-replace.c.o" -o ../../../bin/schema-replace  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f schema-replace.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv schema-replace schema-replace.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s schema-replace.3.2.1 schema-replace.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s schema-replace.3 schema-replace
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 73%] Linking CXX executable ../../../bin/vdb-diff
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-diff && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-diff.dir/link.txt --verbose=1
[ 73%] Built target schema-replace
make  -f tools/test-tools/samview-util/CMakeFiles/samview-util.dir/build.make tools/test-tools/samview-util/CMakeFiles/samview-util.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/samview-util /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/samview-util /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/samview-util/CMakeFiles/samview-util.dir/DependInfo.cmake "--color="
[ 73%] Building C object tools/internal/copycat/CMakeFiles/copycat.dir/kff/ffmagic.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/copycat/CMakeFiles/copycat.dir/kff/ffmagic.c.o -MF CMakeFiles/copycat.dir/kff/ffmagic.c.o.d -o CMakeFiles/copycat.dir/kff/ffmagic.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/kff/ffmagic.c
[ 73%] Linking CXX executable ../../../bin/rowwritetest
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/rowwritetest && /usr/bin/cmake -E cmake_link_script CMakeFiles/rowwritetest.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/samview-util/CMakeFiles/samview-util.dir/build.make tools/test-tools/samview-util/CMakeFiles/samview-util.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 73%] Building C object tools/test-tools/samview-util/CMakeFiles/samview-util.dir/samview.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/samview-util && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/samview-util/CMakeFiles/samview-util.dir/samview.c.o -MF CMakeFiles/samview-util.dir/samview.c.o.d -o CMakeFiles/samview-util.dir/samview.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/samview-util/samview.c
[ 73%] Building C object tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/fasterq-dump.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fasterq-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/fasterq-dump/CMakeFiles/fasterq-dump.dir/fasterq-dump.c.o -MF CMakeFiles/fasterq-dump.dir/fasterq-dump.c.o.d -o CMakeFiles/fasterq-dump.dir/fasterq-dump.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/fasterq-dump/fasterq-dump.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-diff.dir/link.d "CMakeFiles/vdb-diff.dir/namelist_tools.c.o" "CMakeFiles/vdb-diff.dir/coldefs.c.o" "CMakeFiles/vdb-diff.dir/vdb-diff-context.c.o" "CMakeFiles/vdb-diff.dir/cmn.c.o" "CMakeFiles/vdb-diff.dir/row_by_row.c.o" "CMakeFiles/vdb-diff.dir/col_by_col.c.o" "CMakeFiles/vdb-diff.dir/vdb-diff.c.o" -o ../../../bin/vdb-diff  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f vdb-diff.3.2.1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sortreadtest.dir/link.d CMakeFiles/sortreadtest.dir/sortreadtest.c.o -o ../../../bin/sortreadtest  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f sortreadtest.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv vdb-diff vdb-diff.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv sortreadtest sortreadtest.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-diff.3.2.1 vdb-diff.3
[ 73%] Building C object tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/type_matcher.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-copy\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/type_matcher.c.o -MF CMakeFiles/vdb-copy.dir/type_matcher.c.o.d -o CMakeFiles/vdb-copy.dir/type_matcher.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-copy/type_matcher.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sortreadtest.3.2.1 sortreadtest.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-diff.3 vdb-diff
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sortreadtest.3 sortreadtest
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 73%] Built target sortreadtest
[ 73%] Linking CXX executable ../../../bin/samview-util
make  -f tools/test-tools/testld/CMakeFiles/testld.dir/build.make tools/test-tools/testld/CMakeFiles/testld.dir/depend
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/samview-util && /usr/bin/cmake -E cmake_link_script CMakeFiles/samview-util.dir/link.txt --verbose=1
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/testld /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/testld /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/testld/CMakeFiles/testld.dir/DependInfo.cmake "--color="
[ 73%] Built target vdb-diff
In file included from /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/sratools.hpp:31,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/run-source.hpp:39,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/run-source.cpp:51:
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/accession.hpp: In static member function 'static const char* sratools::Accession::qualityTypeFor(const char*)':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/accession.hpp:82:56: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                                                        ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/accession.hpp:82:38: note: the temporary was destroyed at the end of the full expression 'make_sequence<const char**>((& sratools::Accession::extensions[1]), 3)'
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                         ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make  -f tools/test-tools/txt2kdb/CMakeFiles/txt2kdb.dir/build.make tools/test-tools/txt2kdb/CMakeFiles/txt2kdb.dir/depend
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/rowwritetest.dir/link.d CMakeFiles/rowwritetest.dir/rowwritetest.c.o -o ../../../bin/rowwritetest  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f rowwritetest.3.2.1
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/txt2kdb /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/txt2kdb /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/txt2kdb/CMakeFiles/txt2kdb.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv rowwritetest rowwritetest.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s rowwritetest.3.2.1 rowwritetest.3
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/testld/CMakeFiles/testld.dir/build.make tools/test-tools/testld/CMakeFiles/testld.dir/build
[ 73%] Linking CXX executable ../../../bin/copycat
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/copycat && /usr/bin/cmake -E cmake_link_script CMakeFiles/copycat.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s rowwritetest.3 rowwritetest
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/txt2kdb/CMakeFiles/txt2kdb.dir/build.make tools/test-tools/txt2kdb/CMakeFiles/txt2kdb.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 73%] Building C object tools/test-tools/testld/CMakeFiles/testld.dir/testld.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/testld && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/testld/CMakeFiles/testld.dir/testld.c.o -MF CMakeFiles/testld.dir/testld.c.o.d -o CMakeFiles/testld.dir/testld.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/testld/testld.c
[ 73%] Building C object tools/test-tools/txt2kdb/CMakeFiles/txt2kdb.dir/txt2kdb.c.o
[ 73%] Built target rowwritetest
make  -f tools/test-tools/sam-factory/CMakeFiles/sam-factory.dir/build.make tools/test-tools/sam-factory/CMakeFiles/sam-factory.dir/depend
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/txt2kdb && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/txt2kdb/CMakeFiles/txt2kdb.dir/txt2kdb.c.o -MF CMakeFiles/txt2kdb.dir/txt2kdb.c.o.d -o CMakeFiles/txt2kdb.dir/txt2kdb.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/txt2kdb/txt2kdb.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/sam-factory /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sam-factory /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sam-factory/CMakeFiles/sam-factory.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/sam-factory/CMakeFiles/sam-factory.dir/build.make tools/test-tools/sam-factory/CMakeFiles/sam-factory.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 73%] Building CXX object tools/test-tools/sam-factory/CMakeFiles/sam-factory.dir/sam-factory.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sam-factory && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/test-tools/sam-factory/CMakeFiles/sam-factory.dir/sam-factory.cpp.o -MF CMakeFiles/sam-factory.dir/sam-factory.cpp.o.d -o CMakeFiles/sam-factory.dir/sam-factory.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/sam-factory/sam-factory.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/samview-util.dir/link.d "CMakeFiles/samview-util.dir/samview.c.o" -o ../../../bin/samview-util  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f samview-util.3.2.1
[ 73%] Linking CXX executable ../../../bin/fasterq-dump
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv samview-util samview-util.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/fasterq-dump && /usr/bin/cmake -E cmake_link_script CMakeFiles/fasterq-dump.dir/link.txt --verbose=1
[ 73%] Linking CXX executable ../../../bin/testld
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s samview-util.3.2.1 samview-util.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/testld && /usr/bin/cmake -E cmake_link_script CMakeFiles/testld.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/copycat.dir/link.d CMakeFiles/copycat.dir/copycat.c.o CMakeFiles/copycat.dir/ccfileformat.c.o CMakeFiles/copycat.dir/cccat.c.o CMakeFiles/copycat.dir/cctree.c.o "CMakeFiles/copycat.dir/cctree-dump.c.o" CMakeFiles/copycat.dir/cctar.c.o CMakeFiles/copycat.dir/ccsra.c.o CMakeFiles/copycat.dir/ccsubchunk.c.o CMakeFiles/copycat.dir/ccfile.c.o CMakeFiles/copycat.dir/kff/fileformat.c.o CMakeFiles/copycat.dir/kff/ffext.c.o CMakeFiles/copycat.dir/kff/ffkey.c.o CMakeFiles/copycat.dir/kff/ffmagic.c.o -o ../../../bin/copycat  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libmagic.so
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f copycat.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s samview-util.3 samview-util
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv copycat copycat.3.2.1
[ 73%] Built target samview-util
make  -f tools/test-tools/sam-analyze/CMakeFiles/sam-analyze.dir/build.make tools/test-tools/sam-analyze/CMakeFiles/sam-analyze.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/sam-analyze /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sam-analyze /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sam-analyze/CMakeFiles/sam-analyze.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/sam-analyze/CMakeFiles/sam-analyze.dir/build.make tools/test-tools/sam-analyze/CMakeFiles/sam-analyze.dir/build
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s copycat.3.2.1 copycat.3
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s copycat.3 copycat
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 73%] Building CXX object tools/test-tools/sam-analyze/CMakeFiles/sam-analyze.dir/main.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sam-analyze && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/test-tools/sam-analyze/CMakeFiles/sam-analyze.dir/main.cpp.o -MF CMakeFiles/sam-analyze.dir/main.cpp.o.d -o CMakeFiles/sam-analyze.dir/main.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/sam-analyze/main.cpp
[ 73%] Built target copycat
make  -f tools/test-tools/qa-stats/CMakeFiles/qa-stats.dir/build.make tools/test-tools/qa-stats/CMakeFiles/qa-stats.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/qa-stats/CMakeFiles/qa-stats.dir/DependInfo.cmake "--color="
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testld.dir/link.d CMakeFiles/testld.dir/testld.c.o -o ../../../bin/testld  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f testld.3.2.1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/qa-stats/CMakeFiles/qa-stats.dir/build.make tools/test-tools/qa-stats/CMakeFiles/qa-stats.dir/build
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv testld testld.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s testld.3.2.1 testld.3
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/fasterq-dump.dir/link.d "CMakeFiles/fasterq-dump.dir/helper.c.o" "CMakeFiles/fasterq-dump.dir/arg_helper.c.o" "CMakeFiles/fasterq-dump.dir/dflt_defline.c.o" "CMakeFiles/fasterq-dump.dir/tool_ctx.c.o" "CMakeFiles/fasterq-dump.dir/inspector.c.o" "CMakeFiles/fasterq-dump.dir/sbuffer.c.o" "CMakeFiles/fasterq-dump.dir/err_msg.c.o" "CMakeFiles/fasterq-dump.dir/file_tools.c.o" "CMakeFiles/fasterq-dump.dir/var_fmt.c.o" "CMakeFiles/fasterq-dump.dir/flex_printer.c.o" "CMakeFiles/fasterq-dump.dir/temp_dir.c.o" "CMakeFiles/fasterq-dump.dir/progress_thread.c.o" "CMakeFiles/fasterq-dump.dir/cleanup_task.c.o" "CMakeFiles/fasterq-dump.dir/index.c.o" "CMakeFiles/fasterq-dump.dir/lookup_writer.c.o" "CMakeFiles/fasterq-dump.dir/lookup_reader.c.o" "CMakeFiles/fasterq-dump.dir/locked_file_list.c.o" "CMakeFiles/fasterq-dump.dir/locked_value.c.o" "CMakeFiles/fasterq-dump.dir/file_printer.c.o" "CMakeFiles/fasterq-dump.dir/merge_sorter.c.o" "CMakeFiles/fasterq-dump.dir/sorter.c.o" "CMakeFiles/fasterq-dump.dir/cmn_iter.c.o" "CMakeFiles/fasterq-dump.dir/raw_read_iter.c.o" "CMakeFiles/fasterq-dump.dir/special_iter.c.o" "CMakeFiles/fasterq-dump.dir/fq_seq_ua_iter.c.o" "CMakeFiles/fasterq-dump.dir/fq_seq_csra_iter.c.o" "CMakeFiles/fasterq-dump.dir/align_iter.c.o" "CMakeFiles/fasterq-dump.dir/simple_fasta_iter.c.o" "CMakeFiles/fasterq-dump.dir/db_join.c.o" "CMakeFiles/fasterq-dump.dir/tbl_join.c.o" "CMakeFiles/fasterq-dump.dir/temp_registry.c.o" "CMakeFiles/fasterq-dump.dir/copy_machine.c.o" "CMakeFiles/fasterq-dump.dir/multi_writer.c.o" "CMakeFiles/fasterq-dump.dir/concatenator.c.o" "CMakeFiles/fasterq-dump.dir/ref_inventory.c.o" "CMakeFiles/fasterq-dump.dir/fasterq-dump.c.o" -o ../../../bin/fasterq-dump  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto ../../../ilib/libksrch.a
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s testld.3 testld
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f fasterq-dump.3.2.1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 73%] Building CXX object tools/test-tools/qa-stats/CMakeFiles/qa-stats.dir/main.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/qa-stats && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/test-tools/qa-stats/CMakeFiles/qa-stats.dir/main.cpp.o -MF CMakeFiles/qa-stats.dir/main.cpp.o.d -o CMakeFiles/qa-stats.dir/main.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/qa-stats/main.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv fasterq-dump fasterq-dump.3.2.1
[ 73%] Linking CXX executable ../../../bin/txt2kdb
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/txt2kdb && /usr/bin/cmake -E cmake_link_script CMakeFiles/txt2kdb.dir/link.txt --verbose=1
[ 73%] Building C object tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/redactval.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-copy\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/redactval.c.o -MF CMakeFiles/vdb-copy.dir/redactval.c.o.d -o CMakeFiles/vdb-copy.dir/redactval.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-copy/redactval.c
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s fasterq-dump.3.2.1 fasterq-dump.3
[ 73%] Built target testld
make  -f tools/test-tools/rnd2sra/CMakeFiles/rnd2sra.dir/build.make tools/test-tools/rnd2sra/CMakeFiles/rnd2sra.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/rnd2sra /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/rnd2sra /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/rnd2sra/CMakeFiles/rnd2sra.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s fasterq-dump.3 fasterq-dump
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sratools.3.2.1 fasterq-dump-driver
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/rnd2sra/CMakeFiles/rnd2sra.dir/build.make tools/test-tools/rnd2sra/CMakeFiles/rnd2sra.dir/build
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 73%] Built target fasterq-dump
[ 73%] Building CXX object tools/test-tools/rnd2sra/CMakeFiles/rnd2sra.dir/src/rnd2sra.cpp.o
make  -f test/libs/kfile_stream/CMakeFiles/Test_KFile_Stream.dir/build.make test/libs/kfile_stream/CMakeFiles/Test_KFile_Stream.dir/depend
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/rnd2sra && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/test-tools/rnd2sra/CMakeFiles/rnd2sra.dir/src/rnd2sra.cpp.o -MF CMakeFiles/rnd2sra.dir/src/rnd2sra.cpp.o.d -o CMakeFiles/rnd2sra.dir/src/rnd2sra.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/rnd2sra/src/rnd2sra.cpp
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/libs/kfile_stream /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/libs/kfile_stream /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/libs/kfile_stream/CMakeFiles/Test_KFile_Stream.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/libs/kfile_stream/CMakeFiles/Test_KFile_Stream.dir/build.make test/libs/kfile_stream/CMakeFiles/Test_KFile_Stream.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/txt2kdb.dir/link.d CMakeFiles/txt2kdb.dir/txt2kdb.c.o -o ../../../bin/txt2kdb  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f txt2kdb.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv txt2kdb txt2kdb.3.2.1
[ 73%] Building CXX object test/libs/kfile_stream/CMakeFiles/Test_KFile_Stream.dir/custom_stream.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/libs/kfile_stream && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/libs/kfile_stream/CMakeFiles/Test_KFile_Stream.dir/custom_stream.cpp.o -MF CMakeFiles/Test_KFile_Stream.dir/custom_stream.cpp.o.d -o CMakeFiles/Test_KFile_Stream.dir/custom_stream.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/libs/kfile_stream/custom_stream.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s txt2kdb.3.2.1 txt2kdb.3
[ 73%] Building C object tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/config_values.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s txt2kdb.3 txt2kdb
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-copy\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/config_values.c.o -MF CMakeFiles/vdb-copy.dir/config_values.c.o.d -o CMakeFiles/vdb-copy.dir/config_values.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-copy/config_values.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 73%] Built target txt2kdb
make  -f test/vdb/CMakeFiles/Test_VDB.dir/build.make test/vdb/CMakeFiles/Test_VDB.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/vdb /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/vdb /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/vdb/CMakeFiles/Test_VDB.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/vdb/CMakeFiles/Test_VDB.dir/build.make test/vdb/CMakeFiles/Test_VDB.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 73%] Building C object tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/vdb-copy.c.o
[ 73%] Building CXX object test/vdb/CMakeFiles/Test_VDB.dir/test-vdb.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/vdb && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/vdb/CMakeFiles/Test_VDB.dir/test-vdb.cpp.o -MF CMakeFiles/Test_VDB.dir/test-vdb.cpp.o.d -o CMakeFiles/Test_VDB.dir/test-vdb.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/vdb/test-vdb.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-copy\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-copy/CMakeFiles/vdb-copy.dir/vdb-copy.c.o -MF CMakeFiles/vdb-copy.dir/vdb-copy.c.o.d -o CMakeFiles/vdb-copy.dir/vdb-copy.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-copy/vdb-copy.c
[ 73%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/proc.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DBUILD_PATH=\"/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin\" -DLINUX -DNDEBUG -DPREFIX_PATH=\"\" -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/proc.cpp.o -MF CMakeFiles/sratools.dir/proc.cpp.o.d -o CMakeFiles/sratools.dir/proc.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/proc.cpp
[ 73%] Linking CXX executable ../../../bin/vdb-copy
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-copy.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-copy.dir/link.d "CMakeFiles/vdb-copy.dir/context.c.o" "CMakeFiles/vdb-copy.dir/helper.c.o" "CMakeFiles/vdb-copy.dir/coldefs.c.o" "CMakeFiles/vdb-copy.dir/get_platform.c.o" "CMakeFiles/vdb-copy.dir/copy_meta.c.o" "CMakeFiles/vdb-copy.dir/type_matcher.c.o" "CMakeFiles/vdb-copy.dir/redactval.c.o" "CMakeFiles/vdb-copy.dir/config_values.c.o" "CMakeFiles/vdb-copy.dir/vdb-copy.c.o" -o ../../../bin/vdb-copy  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f vdb-copy.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv vdb-copy vdb-copy.3.2.1
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/proc.cpp: In function 'void printEnvironment(bool)':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/proc.cpp:68:93: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   68 |     for (auto name : make_sequence(constants::env_var::names(), constants::env_var::END_ENUM))
      |                                                                                             ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/proc.cpp:68:35: note: the temporary was destroyed at the end of the full expression 'make_sequence<const char* const*>(constants::env_var::names(), ((size_t)constants::env_var::END_ENUM))'
   68 |     for (auto name : make_sequence(constants::env_var::names(), constants::env_var::END_ENUM))
      |                      ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/proc.cpp: In function 'std::ostream& jsonPrintEnvVars(std::ostream&)':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/proc.cpp:183:93: warning: possibly dangling reference to a temporary [-Wdangling-reference]
  183 |     for (auto name : make_sequence(constants::env_var::names(), constants::env_var::END_ENUM))
      |                                                                                             ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/proc.cpp:183:35: note: the temporary was destroyed at the end of the full expression 'make_sequence<const char* const*>(constants::env_var::names(), ((size_t)constants::env_var::END_ENUM))'
  183 |     for (auto name : make_sequence(constants::env_var::names(), constants::env_var::END_ENUM))
      |                      ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/proc.cpp: In function 'void testing_5()':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/proc.cpp:228:93: warning: possibly dangling reference to a temporary [-Wdangling-reference]
  228 |     for (auto name : make_sequence(constants::env_var::names(), constants::env_var::END_ENUM)) {
      |                                                                                             ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/proc.cpp:228:35: note: the temporary was destroyed at the end of the full expression 'make_sequence<const char* const*>(constants::env_var::names(), ((size_t)constants::env_var::END_ENUM))'
  228 |     for (auto name : make_sequence(constants::env_var::names(), constants::env_var::END_ENUM)) {
      |                      ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-copy.3.2.1 vdb-copy.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-copy.3 vdb-copy
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-copy && /usr/bin/cmake -E copy /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-copy/vdb-copy.kfg /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/ncbi/vdb-copy.kfg
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 73%] Built target vdb-copy
make  -f test/vdb/CMakeFiles/Test_WVDB.dir/build.make test/vdb/CMakeFiles/Test_WVDB.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/vdb /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/vdb /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/vdb/CMakeFiles/Test_WVDB.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/vdb/CMakeFiles/Test_WVDB.dir/build.make test/vdb/CMakeFiles/Test_WVDB.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 73%] Building CXX object test/vdb/CMakeFiles/Test_WVDB.dir/test-wvdb.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/vdb && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/vdb/CMakeFiles/Test_WVDB.dir/test-wvdb.cpp.o -MF CMakeFiles/Test_WVDB.dir/test-wvdb.cpp.o.d -o CMakeFiles/Test_WVDB.dir/test-wvdb.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/vdb/test-wvdb.cpp
[ 73%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/uuid.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DBUILD_PATH=\"/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin\" -DLINUX -DNDEBUG -DPREFIX_PATH=\"\" -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/uuid.cpp.o -MF CMakeFiles/sratools.dir/uuid.cpp.o.d -o CMakeFiles/sratools.dir/uuid.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/uuid.cpp
[ 73%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/accession.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DBUILD_PATH=\"/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin\" -DLINUX -DNDEBUG -DPREFIX_PATH=\"\" -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/accession.cpp.o -MF CMakeFiles/sratools.dir/accession.cpp.o.d -o CMakeFiles/sratools.dir/accession.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/accession.cpp
In file included from /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/accession.cpp:36:
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/accession.hpp: In static member function 'static const char* sratools::Accession::qualityTypeFor(const char*)':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/accession.hpp:82:56: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                                                        ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/accession.hpp:82:38: note: the temporary was destroyed at the end of the full expression 'make_sequence<const char**>((& sratools::Accession::extensions[1]), 3)'
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                         ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 73%] Linking CXX executable ../../../test-bin/Test_KFile_Stream
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/libs/kfile_stream && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_KFile_Stream.dir/link.txt --verbose=1
[ 73%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/service.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DBUILD_PATH=\"/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin\" -DLINUX -DNDEBUG -DPREFIX_PATH=\"\" -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/service.cpp.o -MF CMakeFiles/sratools.dir/service.cpp.o.d -o CMakeFiles/sratools.dir/service.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/service.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_KFile_Stream.dir/link.d CMakeFiles/Test_KFile_Stream.dir/custom_stream.cpp.o -o ../../../test-bin/Test_KFile_Stream  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 73%] Built target Test_KFile_Stream
[ 73%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/json-parse.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DBUILD_PATH=\"/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin\" -DLINUX -DNDEBUG -DPREFIX_PATH=\"\" -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/json-parse.cpp.o -MF CMakeFiles/sratools.dir/json-parse.cpp.o.d -o CMakeFiles/sratools.dir/json-parse.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/json-parse.cpp
[ 73%] Linking CXX executable ../../../bin/sra-info
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-info && /usr/bin/cmake -E cmake_link_script CMakeFiles/sra-info.dir/link.txt --verbose=1
[ 73%] Linking CXX executable ../../test-bin/Test_WVDB
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/vdb && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_WVDB.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sra-info.dir/link.d "CMakeFiles/sra-info.dir/main.cpp.o" "CMakeFiles/sra-info.dir/sra-info.cpp.o" "CMakeFiles/sra-info.dir/formatter.cpp.o" -o ../../../bin/sra-info  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f sra-info.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv sra-info sra-info.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-info.3.2.1 sra-info.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-info.3 sra-info
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 73%] Built target sra-info
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_WVDB.dir/link.d "CMakeFiles/Test_WVDB.dir/test-wvdb.cpp.o" -o ../../test-bin/Test_WVDB  -lkapp /usr/lib/aarch64-linux-gnu/libkapp.a ../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/schema/CMakeFiles/Test_SraSchema_Unit.dir/build.make test/schema/CMakeFiles/Test_SraSchema_Unit.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/schema /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/schema /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/schema/CMakeFiles/Test_SraSchema_Unit.dir/DependInfo.cmake "--color="
[ 73%] Built target Test_WVDB
make  -f test/search/CMakeFiles/Test_SEARCH_agrep.dir/build.make test/search/CMakeFiles/Test_SEARCH_agrep.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/search /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/search /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/search/CMakeFiles/Test_SEARCH_agrep.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/schema/CMakeFiles/Test_SraSchema_Unit.dir/build.make test/schema/CMakeFiles/Test_SraSchema_Unit.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 73%] Building CXX object test/schema/CMakeFiles/Test_SraSchema_Unit.dir/test-schema.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/schema && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/schema/CMakeFiles/Test_SraSchema_Unit.dir/test-schema.cpp.o -MF CMakeFiles/Test_SraSchema_Unit.dir/test-schema.cpp.o.d -o CMakeFiles/Test_SraSchema_Unit.dir/test-schema.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/schema/test-schema.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/search/CMakeFiles/Test_SEARCH_agrep.dir/build.make test/search/CMakeFiles/Test_SEARCH_agrep.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 73%] Building CXX object test/search/CMakeFiles/Test_SEARCH_agrep.dir/test-agrep.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/search && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/search/CMakeFiles/Test_SEARCH_agrep.dir/test-agrep.cpp.o -MF CMakeFiles/Test_SEARCH_agrep.dir/test-agrep.cpp.o.d -o CMakeFiles/Test_SEARCH_agrep.dir/test-agrep.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/search/test-agrep.cpp
[ 73%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/SDL-response.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DBUILD_PATH=\"/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin\" -DLINUX -DNDEBUG -DPREFIX_PATH=\"\" -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/SDL-response.cpp.o -MF CMakeFiles/sratools.dir/SDL-response.cpp.o.d -o CMakeFiles/sratools.dir/SDL-response.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/SDL-response.cpp
[ 73%] Linking CXX executable ../../test-bin/Test_SraSchema_Unit
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/schema && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_SraSchema_Unit.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_SraSchema_Unit.dir/link.d "CMakeFiles/Test_SraSchema_Unit.dir/test-schema.cpp.o" -o ../../test-bin/Test_SraSchema_Unit  ../../ilib/libsra.a -lkapp /usr/lib/aarch64-linux-gnu/libkapp.a ../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 73%] Built target Test_SraSchema_Unit
make  -f test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir/build.make test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/ngs/ngs-java /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/ngs/ngs-java /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir/build.make test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 74%] Building Java objects for test-ngs-java.jar
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/ngs/ngs-java && /usr/bin/cmake -DCMAKE_JAVA_CLASS_OUTPUT_PATH=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir -DCMAKE_JAR_CLASSES_PREFIX= -P /usr/share/cmake-3.31/Modules/UseJava/ClearClassFiles.cmake --log-level STATUS
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/ngs/ngs-java && /usr/bin/javac -classpath :/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib/ngs-java.jar:/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/ngs/ngs-java/junit-4.11.jar:/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/ngs/ngs-java:/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib:/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib/ngs-java.jar:/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/ngs/ngs-java/junit-4.11.jar -d /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir @/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir/java_sources
[ 74%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/tool-args.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DBUILD_PATH=\"/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin\" -DLINUX -DNDEBUG -DPREFIX_PATH=\"\" -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/tool-args.cpp.o -MF CMakeFiles/sratools.dir/tool-args.cpp.o.d -o CMakeFiles/sratools.dir/tool-args.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/tool-args.cpp
[ 75%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/build-version.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DBUILD_PATH=\"/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin\" -DLINUX -DNDEBUG -DPREFIX_PATH=\"\" -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/build-version.cpp.o -MF CMakeFiles/sratools.dir/build-version.cpp.o.d -o CMakeFiles/sratools.dir/build-version.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/build-version.cpp
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/vdb-sqlite/sqlite3.c: In function 'sqlite3SelectNew':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/vdb-sqlite/sqlite3.c:115649:10: warning: function may return address of local variable [-Wreturn-local-addr]
115649 |   return pNew;
       |          ^~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/vdb-sqlite/sqlite3.c:115609:10: note: declared here
115609 |   Select standin;
       |          ^~~~~~~
[ 75%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/file-path.posix.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DBUILD_PATH=\"/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin\" -DLINUX -DNDEBUG -DPREFIX_PATH=\"\" -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/file-path.posix.cpp.o -MF CMakeFiles/sratools.dir/file-path.posix.cpp.o.d -o CMakeFiles/sratools.dir/file-path.posix.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/file-path.posix.cpp
Note: ngs_test_lib_load.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/ngs/ngs-java && /usr/bin/cmake -E touch /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir/java_compiled_test-ngs-java
[ 75%] Generating CMakeFiles/test-ngs-java.dir/java_class_filelist
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/ngs/ngs-java && /usr/bin/cmake -DCMAKE_JAVA_CLASS_OUTPUT_PATH=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir -DCMAKE_JAR_CLASSES_PREFIX= -P /usr/share/cmake-3.31/Modules/UseJava/ClassFilelist.cmake
[ 75%] Creating Java archive test-ngs-java.jar
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir && /usr/bin/jar -cf /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib/test-ngs-java.jar @java_class_filelist
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/ngs/ngs-java/CMakeFiles/test-ngs-java.dir && /usr/bin/cmake -D_JAVA_TARGET_DIR=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib -D_JAVA_TARGET_OUTPUT_NAME=test-ngs-java.jar -D_JAVA_TARGET_OUTPUT_LINK= -P /usr/share/cmake-3.31/Modules/UseJava/Symlinks.cmake
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 75%] Built target test-ngs-java
make  -f test/external/align-info/CMakeFiles/Build-align-info.dir/build.make test/external/align-info/CMakeFiles/Build-align-info.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/align-info /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/align-info /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/align-info/CMakeFiles/Build-align-info.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/align-info/CMakeFiles/Build-align-info.dir/build.make test/external/align-info/CMakeFiles/Build-align-info.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/align-info/CMakeFiles/Build-align-info.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 75%] Built target Build-align-info
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_BuildVersion.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_BuildVersion.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool/CMakeFiles/Test_Drivertool_BuildVersion.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_BuildVersion.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_BuildVersion.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 75%] Linking CXX executable ../../../bin/sam-factory
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sam-factory && /usr/bin/cmake -E cmake_link_script CMakeFiles/sam-factory.dir/link.txt --verbose=1
[ 75%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_BuildVersion.dir/test-build-version.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_BuildVersion.dir/test-build-version.cpp.o -MF CMakeFiles/Test_Drivertool_BuildVersion.dir/test-build-version.cpp.o.d -o CMakeFiles/Test_Drivertool_BuildVersion.dir/test-build-version.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/test-build-version.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sam-factory.dir/link.d "CMakeFiles/sam-factory.dir/sam-factory.cpp.o" -o ../../../bin/sam-factory  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 75%] Built target sam-factory
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_FilePath.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_FilePath.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool/CMakeFiles/Test_Drivertool_FilePath.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_FilePath.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_FilePath.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 75%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_FilePath.dir/test-filepath.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_FilePath.dir/test-filepath.cpp.o -MF CMakeFiles/Test_Drivertool_FilePath.dir/test-filepath.cpp.o.d -o CMakeFiles/Test_Drivertool_FilePath.dir/test-filepath.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/test-filepath.cpp
[ 75%] Building C object tools/test-tools/sam-analyze/CMakeFiles/sam-analyze.dir/sqlite3.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sam-analyze && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/test-tools/sam-analyze/CMakeFiles/sam-analyze.dir/sqlite3.c.o -MF CMakeFiles/sam-analyze.dir/sqlite3.c.o.d -o CMakeFiles/sam-analyze.dir/sqlite3.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/sam-analyze/sqlite3.c
[ 75%] Building CXX object tools/external/driver-tool/CMakeFiles/sratools.dir/proc.posix.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DBUILD_PATH=\"/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin\" -DLINUX -DNDEBUG -DPREFIX_PATH=\"\" -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/driver-tool\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/driver-tool/CMakeFiles/sratools.dir/proc.posix.cpp.o -MF CMakeFiles/sratools.dir/proc.posix.cpp.o.d -o CMakeFiles/sratools.dir/proc.posix.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/proc.posix.cpp
[ 75%] Linking CXX executable ../../../test-bin/Test_Drivertool_BuildVersion
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Drivertool_BuildVersion.dir/link.txt --verbose=1
[ 75%] Linking CXX executable ../../test-bin/Test_VDB
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/vdb && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_VDB.dir/link.txt --verbose=1
[ 75%] Building C object test/search/CMakeFiles/Test_SEARCH_agrep.dir/agrep-main.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/search && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT test/search/CMakeFiles/Test_SEARCH_agrep.dir/agrep-main.c.o -MF CMakeFiles/Test_SEARCH_agrep.dir/agrep-main.c.o.d -o CMakeFiles/Test_SEARCH_agrep.dir/agrep-main.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/search/agrep-main.c
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Drivertool_BuildVersion.dir/link.d "CMakeFiles/Test_Drivertool_BuildVersion.dir/test-build-version.cpp.o" -o ../../../test-bin/Test_Drivertool_BuildVersion
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 75%] Building CXX object tools/test-tools/qa-stats/CMakeFiles/qa-stats.dir/input.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/qa-stats && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/test-tools/qa-stats/CMakeFiles/qa-stats.dir/input.cpp.o -MF CMakeFiles/qa-stats.dir/input.cpp.o.d -o CMakeFiles/qa-stats.dir/input.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/qa-stats/input.cpp
[ 75%] Built target Test_Drivertool_BuildVersion
/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/search/agrep-main.c: In function 'main_agrep_test':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/search/agrep-main.c:229:13: warning: variable 'slow' set but not used [-Wunused-but-set-variable]
  229 |     int32_t slow = 0;
      |             ^~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/search/agrep-main.c:228:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  228 |     int32_t count;
      |             ^~~~~
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_CommandLine.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_CommandLine.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool/CMakeFiles/Test_Drivertool_CommandLine.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_CommandLine.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_CommandLine.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 75%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_CommandLine.dir/test-command-line.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_CommandLine.dir/test-command-line.cpp.o -MF CMakeFiles/Test_Drivertool_CommandLine.dir/test-command-line.cpp.o.d -o CMakeFiles/Test_Drivertool_CommandLine.dir/test-command-line.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/test-command-line.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_VDB.dir/link.d "CMakeFiles/Test_VDB.dir/test-vdb.cpp.o" -o ../../test-bin/Test_VDB  -lkapp /usr/lib/aarch64-linux-gnu/libkapp.a ../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 75%] Building CXX object test/search/CMakeFiles/Test_SEARCH_agrep.dir/search-vdb.cpp.o
[ 75%] Built target Test_VDB
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_JsonParsing.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_JsonParsing.dir/depend
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/search && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/search/CMakeFiles/Test_SEARCH_agrep.dir/search-vdb.cpp.o -MF CMakeFiles/Test_SEARCH_agrep.dir/search-vdb.cpp.o.d -o CMakeFiles/Test_SEARCH_agrep.dir/search-vdb.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/search/search-vdb.cpp
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool/CMakeFiles/Test_Drivertool_JsonParsing.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_JsonParsing.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_JsonParsing.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 76%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_JsonParsing.dir/test-json-parse.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_JsonParsing.dir/test-json-parse.cpp.o -MF CMakeFiles/Test_Drivertool_JsonParsing.dir/test-json-parse.cpp.o.d -o CMakeFiles/Test_Drivertool_JsonParsing.dir/test-json-parse.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/test-json-parse.cpp
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_SDLResponse.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_SDLResponse.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool/CMakeFiles/Test_Drivertool_SDLResponse.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_SDLResponse.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_SDLResponse.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 76%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_SDLResponse.dir/test-sdl-response.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_SDLResponse.dir/test-sdl-response.cpp.o -MF CMakeFiles/Test_Drivertool_SDLResponse.dir/test-sdl-response.cpp.o.d -o CMakeFiles/Test_Drivertool_SDLResponse.dir/test-sdl-response.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/test-sdl-response.cpp
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_Accession.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_Accession.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool/CMakeFiles/Test_Drivertool_Accession.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_Accession.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_Accession.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 76%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_Accession.dir/test-accession.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_Accession.dir/test-accession.cpp.o -MF CMakeFiles/Test_Drivertool_Accession.dir/test-accession.cpp.o.d -o CMakeFiles/Test_Drivertool_Accession.dir/test-accession.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/test-accession.cpp
[ 76%] Linking CXX executable ../../test-bin/Test_SEARCH_agrep
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/search && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_SEARCH_agrep.dir/link.txt --verbose=1
In file included from /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool/accession.cpp:36,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/test-accession.cpp:39:
/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool/accession.hpp: In static member function 'static const char* sratools::Accession::qualityTypeFor(const char*)':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool/accession.hpp:82:56: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                                                        ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool/accession.hpp:82:38: note: the temporary was destroyed at the end of the full expression 'make_sequence<const char**>((& sratools::Accession::extensions[1]), 3)'
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                         ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_SEARCH_agrep.dir/link.d "CMakeFiles/Test_SEARCH_agrep.dir/test-agrep.cpp.o" "CMakeFiles/Test_SEARCH_agrep.dir/agrep-main.c.o" "CMakeFiles/Test_SEARCH_agrep.dir/search-vdb.cpp.o" -o ../../test-bin/Test_SEARCH_agrep  /usr/lib/aarch64-linux-gnu/libkapp.a ../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a -lncbi-vdb ../../ilib/libksrch.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 76%] Linking CXX executable ../../../test-bin/Test_Drivertool_CommandLine
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Drivertool_CommandLine.dir/link.txt --verbose=1
[ 76%] Built target Test_SEARCH_agrep
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_UUID.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_UUID.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool/CMakeFiles/Test_Drivertool_UUID.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_UUID.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_UUID.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 77%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_UUID.dir/test-uuid.cpp.o
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Drivertool_CommandLine.dir/link.d "CMakeFiles/Test_Drivertool_CommandLine.dir/test-command-line.cpp.o" -o ../../../test-bin/Test_Drivertool_CommandLine
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_UUID.dir/test-uuid.cpp.o -MF CMakeFiles/Test_Drivertool_UUID.dir/test-uuid.cpp.o.d -o CMakeFiles/Test_Drivertool_UUID.dir/test-uuid.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/test-uuid.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 77%] Built target Test_Drivertool_CommandLine
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 77%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/test-run-source.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/test-run-source.cpp.o -MF CMakeFiles/Test_Drivertool_RunSource.dir/test-run-source.cpp.o.d -o CMakeFiles/Test_Drivertool_RunSource.dir/test-run-source.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/test-run-source.cpp
[ 77%] Linking CXX executable ../../../test-bin/Test_Drivertool_Accession
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Drivertool_Accession.dir/link.txt --verbose=1
[ 77%] Linking CXX executable ../../../bin/sratools
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/driver-tool && /usr/bin/cmake -E cmake_link_script CMakeFiles/sratools.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Drivertool_Accession.dir/link.d "CMakeFiles/Test_Drivertool_Accession.dir/test-accession.cpp.o" -o ../../../test-bin/Test_Drivertool_Accession
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 77%] Built target Test_Drivertool_Accession
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/DependInfo.cmake "--color="
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sratools.dir/link.d CMakeFiles/sratools.dir/sratools.cpp.o CMakeFiles/sratools.dir/config.cpp.o "CMakeFiles/sratools.dir/command-line.cpp.o" "CMakeFiles/sratools.dir/run-source.cpp.o" CMakeFiles/sratools.dir/proc.cpp.o CMakeFiles/sratools.dir/uuid.cpp.o CMakeFiles/sratools.dir/accession.cpp.o CMakeFiles/sratools.dir/service.cpp.o "CMakeFiles/sratools.dir/json-parse.cpp.o" "CMakeFiles/sratools.dir/SDL-response.cpp.o" "CMakeFiles/sratools.dir/tool-args.cpp.o" "CMakeFiles/sratools.dir/build-version.cpp.o" "CMakeFiles/sratools.dir/file-path.posix.cpp.o" CMakeFiles/sratools.dir/proc.posix.cpp.o -o ../../../bin/sratools  /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f sratools.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv sratools sratools.3.2.1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/build.make test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/build
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sratools.3.2.1 sratools.3
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sratools.3 sratools
[ 77%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/test-tool-args.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/test-tool-args.cpp.o -MF CMakeFiles/Test_Drivertool_ToolArgs.dir/test-tool-args.cpp.o.d -o CMakeFiles/Test_Drivertool_ToolArgs.dir/test-tool-args.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/test-tool-args.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 77%] Built target sratools
make  -f test/external/kdbmeta/CMakeFiles/Build-kdbmeta.dir/build.make test/external/kdbmeta/CMakeFiles/Build-kdbmeta.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/kdbmeta /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/kdbmeta /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/kdbmeta/CMakeFiles/Build-kdbmeta.dir/DependInfo.cmake "--color="
In file included from /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool/sratools.hpp:31,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool/run-source.hpp:39,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/test-run-source.cpp:38:
/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool/accession.hpp: In static member function 'static const char* sratools::Accession::qualityTypeFor(const char*)':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool/accession.hpp:82:56: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                                                        ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool/accession.hpp:82:38: note: the temporary was destroyed at the end of the full expression 'make_sequence<const char**>((& sratools::Accession::extensions[1]), 3)'
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                         ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/kdbmeta/CMakeFiles/Build-kdbmeta.dir/build.make test/external/kdbmeta/CMakeFiles/Build-kdbmeta.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/kdbmeta/CMakeFiles/Build-kdbmeta.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 77%] Built target Build-kdbmeta
make  -f test/external/prefetch/CMakeFiles/Build-prefetch.dir/build.make test/external/prefetch/CMakeFiles/Build-prefetch.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/prefetch /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/prefetch /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/prefetch/CMakeFiles/Build-prefetch.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/prefetch/CMakeFiles/Build-prefetch.dir/build.make test/external/prefetch/CMakeFiles/Build-prefetch.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/prefetch/CMakeFiles/Build-prefetch.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 77%] Built target Build-prefetch
make  -f test/external/prefetch/CMakeFiles/test-quality.dir/build.make test/external/prefetch/CMakeFiles/test-quality.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/prefetch /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/prefetch /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/prefetch/CMakeFiles/test-quality.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/prefetch/CMakeFiles/test-quality.dir/build.make test/external/prefetch/CMakeFiles/test-quality.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 77%] Building CXX object test/external/prefetch/CMakeFiles/test-quality.dir/test-quality.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/prefetch && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/external/prefetch\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/prefetch/CMakeFiles/test-quality.dir/test-quality.cpp.o -MF CMakeFiles/test-quality.dir/test-quality.cpp.o.d -o CMakeFiles/test-quality.dir/test-quality.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/prefetch/test-quality.cpp
[ 77%] Linking CXX executable ../../../test-bin/test-quality
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/prefetch && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-quality.dir/link.txt --verbose=1
[ 77%] Linking CXX executable ../../../test-bin/Test_Drivertool_UUID
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Drivertool_UUID.dir/link.txt --verbose=1
[ 77%] Linking CXX executable ../../../test-bin/Test_Drivertool_JsonParsing
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Drivertool_JsonParsing.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-quality.dir/link.d "CMakeFiles/test-quality.dir/test-quality.cpp.o" -o ../../../test-bin/test-quality  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Drivertool_UUID.dir/link.d "CMakeFiles/Test_Drivertool_UUID.dir/test-uuid.cpp.o" -o ../../../test-bin/Test_Drivertool_UUID
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 77%] Built target test-quality
[ 77%] Built target Test_Drivertool_UUID
make  -f test/external/srapath/CMakeFiles/Build-srapath.dir/build.make test/external/srapath/CMakeFiles/Build-srapath.dir/depend
make  -f test/external/sra-pileup/CMakeFiles/Build-sra-pileup.dir/build.make test/external/sra-pileup/CMakeFiles/Build-sra-pileup.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/srapath /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/srapath /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/srapath/CMakeFiles/Build-srapath.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-pileup /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/sra-pileup /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/sra-pileup/CMakeFiles/Build-sra-pileup.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/sra-pileup/CMakeFiles/Build-sra-pileup.dir/build.make test/external/sra-pileup/CMakeFiles/Build-sra-pileup.dir/build
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/srapath/CMakeFiles/Build-srapath.dir/build.make test/external/srapath/CMakeFiles/Build-srapath.dir/build
make[3]: Nothing to be done for 'test/external/sra-pileup/CMakeFiles/Build-sra-pileup.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/srapath/CMakeFiles/Build-srapath.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Drivertool_JsonParsing.dir/link.d "CMakeFiles/Test_Drivertool_JsonParsing.dir/test-json-parse.cpp.o" -o ../../../test-bin/Test_Drivertool_JsonParsing
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 77%] Built target Build-sra-pileup
make  -f test/external/sra-stat/CMakeFiles/Build-sra-stat.dir/build.make test/external/sra-stat/CMakeFiles/Build-sra-stat.dir/depend
[ 77%] Built target Test_Drivertool_JsonParsing
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-stat /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/sra-stat /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/sra-stat/CMakeFiles/Build-sra-stat.dir/DependInfo.cmake "--color="
make  -f test/external/sra-stat/CMakeFiles/testAssemblyStatistics.dir/build.make test/external/sra-stat/CMakeFiles/testAssemblyStatistics.dir/depend
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/vdb-sqlite/sqlite3.c: In function 'sqlite3VdbeExpandSql':
[ 77%] Built target Build-srapath
make  -f test/external/vdb-config/CMakeFiles/test-vdb-config-model.dir/build.make test/external/vdb-config/CMakeFiles/test-vdb-config-model.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-stat /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/sra-stat /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/sra-stat/CMakeFiles/testAssemblyStatistics.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/vdb-config /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-config /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-config/CMakeFiles/test-vdb-config-model.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/sra-stat/CMakeFiles/Build-sra-stat.dir/build.make test/external/sra-stat/CMakeFiles/Build-sra-stat.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/sra-stat/CMakeFiles/Build-sra-stat.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/vdb-sqlite/sqlite3.c:77729:10: warning: function may return address of local variable [-Wreturn-local-addr]
77729 |   return sqlite3StrAccumFinish(&out);
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/sra-stat/CMakeFiles/testAssemblyStatistics.dir/build.make test/external/sra-stat/CMakeFiles/testAssemblyStatistics.dir/build
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/vdb-config/CMakeFiles/test-vdb-config-model.dir/build.make test/external/vdb-config/CMakeFiles/test-vdb-config-model.dir/build
[ 77%] Built target Build-sra-stat
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/build.make test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/vdb-dump /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/DependInfo.cmake "--color="
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/vdb-sqlite/sqlite3.c:77625:8: note: declared here
77625 |   char zBase[100];         /* Initial working space */
      |        ^~~~~
[ 77%] Building CXX object test/external/sra-stat/CMakeFiles/testAssemblyStatistics.dir/testAssemblyStatistics.cpp.o
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/build.make test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/sra-stat && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/external/sra-stat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/sra-stat/CMakeFiles/testAssemblyStatistics.dir/testAssemblyStatistics.cpp.o -MF CMakeFiles/testAssemblyStatistics.dir/testAssemblyStatistics.cpp.o.d -o CMakeFiles/testAssemblyStatistics.dir/testAssemblyStatistics.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-stat/testAssemblyStatistics.cpp
[ 77%] Building CXX object test/external/vdb-config/CMakeFiles/test-vdb-config-model.dir/test-vdb-config-model.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-config && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/external/vdb-config\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/vdb-config/CMakeFiles/test-vdb-config-model.dir/test-vdb-config-model.cpp.o -MF CMakeFiles/test-vdb-config-model.dir/test-vdb-config-model.cpp.o.d -o CMakeFiles/test-vdb-config-model.dir/test-vdb-config-model.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/vdb-config/test-vdb-config-model.cpp
[ 77%] Building CXX object test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/test-view-spec.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/external/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/test-view-spec.cpp.o -MF CMakeFiles/Test_Vdb_dump_view-spec.dir/test-view-spec.cpp.o.d -o CMakeFiles/Test_Vdb_dump_view-spec.dir/test-view-spec.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/vdb-dump/test-view-spec.cpp
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/vdb-sqlite/sqlite3.c:77729:10: warning: function may return address of local variable [-Wreturn-local-addr]
77729 |   return sqlite3StrAccumFinish(&out);
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/vdb-sqlite/sqlite3.c:77625:8: note: declared here
77625 |   char zBase[100];         /* Initial working space */
      |        ^~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/vdb-sqlite/sqlite3.c:77625:8: note: declared here
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/vdb-sqlite/sqlite3.c:77625:8: note: declared here
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/vdb-sqlite/sqlite3.c:77625:8: note: declared here
[ 77%] Linking CXX executable ../../../test-bin/Test_Drivertool_FilePath
[ 77%] Linking CXX executable ../../../bin/qa-stats
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Drivertool_FilePath.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/qa-stats && /usr/bin/cmake -E cmake_link_script CMakeFiles/qa-stats.dir/link.txt --verbose=1
[ 77%] Linking CXX executable ../../../bin/rnd2sra
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/rnd2sra && /usr/bin/cmake -E cmake_link_script CMakeFiles/rnd2sra.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/qa-stats.dir/link.d "CMakeFiles/qa-stats.dir/main.cpp.o" "CMakeFiles/qa-stats.dir/input.cpp.o" -o ../../../bin/qa-stats
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Drivertool_FilePath.dir/link.d "CMakeFiles/Test_Drivertool_FilePath.dir/test-filepath.cpp.o" -o ../../../test-bin/Test_Drivertool_FilePath  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 77%] Built target qa-stats
[ 77%] Built target Test_Drivertool_FilePath
make  -f test/external/vdb-dump/CMakeFiles/vdb-dump-makedb.dir/build.make test/external/vdb-dump/CMakeFiles/vdb-dump-makedb.dir/depend
make  -f test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-alias.dir/build.make test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-alias.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/vdb-dump /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump/CMakeFiles/vdb-dump-makedb.dir/DependInfo.cmake "--color="
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/rnd2sra.dir/link.d CMakeFiles/rnd2sra.dir/src/rnd2sra.cpp.o -o ../../../bin/rnd2sra  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto -lstdc++fs
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/vdb-dump /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-alias.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/vdb-dump/CMakeFiles/vdb-dump-makedb.dir/build.make test/external/vdb-dump/CMakeFiles/vdb-dump-makedb.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-alias.dir/build.make test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-alias.dir/build
[ 77%] Built target rnd2sra
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 77%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/tool-args.cpp.o
make  -f test/external/vdb-validate/CMakeFiles/Test_VdbValidate_Unit.dir/build.make test/external/vdb-validate/CMakeFiles/Test_VdbValidate_Unit.dir/depend
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/tool-args.cpp.o -MF CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/tool-args.cpp.o.d -o CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/tool-args.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/tool-args.cpp
[ 77%] Building CXX object test/external/vdb-dump/CMakeFiles/vdb-dump-makedb.dir/makedb.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/external/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/vdb-dump/CMakeFiles/vdb-dump-makedb.dir/makedb.cpp.o -MF CMakeFiles/vdb-dump-makedb.dir/makedb.cpp.o.d -o CMakeFiles/vdb-dump-makedb.dir/makedb.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/vdb-dump/makedb.cpp
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/vdb-validate /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-validate /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-validate/CMakeFiles/Test_VdbValidate_Unit.dir/DependInfo.cmake "--color="
[ 77%] Building CXX object test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-alias.dir/test-view-alias.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/external/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-alias.dir/test-view-alias.cpp.o -MF CMakeFiles/Test_Vdb_dump_view-alias.dir/test-view-alias.cpp.o.d -o CMakeFiles/Test_Vdb_dump_view-alias.dir/test-view-alias.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/vdb-dump/test-view-alias.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/vdb-validate/CMakeFiles/Test_VdbValidate_Unit.dir/build.make test/external/vdb-validate/CMakeFiles/Test_VdbValidate_Unit.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 77%] Building CXX object test/external/vdb-validate/CMakeFiles/Test_VdbValidate_Unit.dir/test-vdb-validate.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-validate && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/external/vdb-validate\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-validate -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/vdb-validate/CMakeFiles/Test_VdbValidate_Unit.dir/test-vdb-validate.cpp.o -MF CMakeFiles/Test_VdbValidate_Unit.dir/test-vdb-validate.cpp.o.d -o CMakeFiles/Test_VdbValidate_Unit.dir/test-vdb-validate.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/vdb-validate/test-vdb-validate.cpp
[ 77%] Linking CXX executable ../../../test-bin/testAssemblyStatistics
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/sra-stat && /usr/bin/cmake -E cmake_link_script CMakeFiles/testAssemblyStatistics.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testAssemblyStatistics.dir/link.d CMakeFiles/testAssemblyStatistics.dir/testAssemblyStatistics.cpp.o -o ../../../test-bin/testAssemblyStatistics  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 77%] Built target testAssemblyStatistics
make  -f test/external/vdb-validate/CMakeFiles/Build-vdb-validate.dir/build.make test/external/vdb-validate/CMakeFiles/Build-vdb-validate.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/vdb-validate /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-validate /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-validate/CMakeFiles/Build-vdb-validate.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/vdb-validate/CMakeFiles/Build-vdb-validate.dir/build.make test/external/vdb-validate/CMakeFiles/Build-vdb-validate.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/vdb-validate/CMakeFiles/Build-vdb-validate.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 77%] Built target Build-vdb-validate
make  -f test/external/sra-info/CMakeFiles/Test_SraInfo_Unit.dir/build.make test/external/sra-info/CMakeFiles/Test_SraInfo_Unit.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/sra-info /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/sra-info/CMakeFiles/Test_SraInfo_Unit.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/sra-info/CMakeFiles/Test_SraInfo_Unit.dir/build.make test/external/sra-info/CMakeFiles/Test_SraInfo_Unit.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 78%] Building CXX object test/external/sra-info/CMakeFiles/Test_SraInfo_Unit.dir/test-sra-info.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/sra-info && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/external/sra-info\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-info -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/sra-info/CMakeFiles/Test_SraInfo_Unit.dir/test-sra-info.cpp.o -MF CMakeFiles/Test_SraInfo_Unit.dir/test-sra-info.cpp.o.d -o CMakeFiles/Test_SraInfo_Unit.dir/test-sra-info.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info/test-sra-info.cpp
[ 78%] Linking CXX executable ../../../test-bin/Test_Vdb_dump_view-alias
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Vdb_dump_view-alias.dir/link.txt --verbose=1
[ 78%] Linking CXX executable ../../../test-bin/vdb-dump-makedb
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-dump-makedb.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Vdb_dump_view-alias.dir/link.d "CMakeFiles/Test_Vdb_dump_view-alias.dir/test-view-alias.cpp.o" -o ../../../test-bin/Test_Vdb_dump_view-alias  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 78%] Built target Test_Vdb_dump_view-alias
make  -f test/external/sra-info/CMakeFiles/Build-sra-info.dir/build.make test/external/sra-info/CMakeFiles/Build-sra-info.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/sra-info /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/sra-info/CMakeFiles/Build-sra-info.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/sra-info/CMakeFiles/Build-sra-info.dir/build.make test/external/sra-info/CMakeFiles/Build-sra-info.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/sra-info/CMakeFiles/Build-sra-info.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-dump-makedb.dir/link.d "CMakeFiles/vdb-dump-makedb.dir/makedb.cpp.o" -o ../../../test-bin/vdb-dump-makedb  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
[ 78%] Built target Build-sra-info
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/bam-load/CMakeFiles/Test_BamLoader_platform.dir/build.make test/loaders/bam-load/CMakeFiles/Test_BamLoader_platform.dir/depend
[ 78%] Built target vdb-dump-makedb
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/bam-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/bam-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/bam-load/CMakeFiles/Test_BamLoader_platform.dir/DependInfo.cmake "--color="
make  -f test/loaders/kar/CMakeFiles/Build-kar.dir/build.make test/loaders/kar/CMakeFiles/Build-kar.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/kar /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/kar /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/kar/CMakeFiles/Build-kar.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/bam-load/CMakeFiles/Test_BamLoader_platform.dir/build.make test/loaders/bam-load/CMakeFiles/Test_BamLoader_platform.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/kar/CMakeFiles/Build-kar.dir/build.make test/loaders/kar/CMakeFiles/Build-kar.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/loaders/kar/CMakeFiles/Build-kar.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 79%] Building CXX object test/loaders/bam-load/CMakeFiles/Test_BamLoader_platform.dir/sam-platform.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/bam-load && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/loaders/bam-load/CMakeFiles/Test_BamLoader_platform.dir/sam-platform.cpp.o -MF CMakeFiles/Test_BamLoader_platform.dir/sam-platform.cpp.o.d -o CMakeFiles/Test_BamLoader_platform.dir/sam-platform.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/bam-load/sam-platform.cpp
[ 79%] Built target Build-kar
make  -f test/loaders/loader/CMakeFiles/Test_KAPP_qfile.dir/build.make test/loaders/loader/CMakeFiles/Test_KAPP_qfile.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/loader/CMakeFiles/Test_KAPP_qfile.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/loader/CMakeFiles/Test_KAPP_qfile.dir/build.make test/loaders/loader/CMakeFiles/Test_KAPP_qfile.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 79%] Building C object test/loaders/loader/CMakeFiles/Test_KAPP_qfile.dir/qfiletest.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/loaders/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT test/loaders/loader/CMakeFiles/Test_KAPP_qfile.dir/qfiletest.c.o -MF CMakeFiles/Test_KAPP_qfile.dir/qfiletest.c.o.d -o CMakeFiles/Test_KAPP_qfile.dir/qfiletest.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/loader/qfiletest.c
[ 80%] Linking CXX executable ../../../test-bin/Test_KAPP_qfile
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_KAPP_qfile.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_KAPP_qfile.dir/link.d CMakeFiles/Test_KAPP_qfile.dir/qfiletest.c.o -o ../../../test-bin/Test_KAPP_qfile  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 80%] Built target Test_KAPP_qfile
make  -f test/loaders/loader/CMakeFiles/Test_LOADERFILE.dir/build.make test/loaders/loader/CMakeFiles/Test_LOADERFILE.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/loader/CMakeFiles/Test_LOADERFILE.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/loader/CMakeFiles/Test_LOADERFILE.dir/build.make test/loaders/loader/CMakeFiles/Test_LOADERFILE.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 80%] Building CXX object test/loaders/loader/CMakeFiles/Test_LOADERFILE.dir/test-loaderfile.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/loaders/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/loaders/loader/CMakeFiles/Test_LOADERFILE.dir/test-loaderfile.cpp.o -MF CMakeFiles/Test_LOADERFILE.dir/test-loaderfile.cpp.o.d -o CMakeFiles/Test_LOADERFILE.dir/test-loaderfile.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/loader/test-loaderfile.cpp
[ 80%] Linking CXX executable ../../../test-bin/Test_Drivertool_SDLResponse
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Drivertool_SDLResponse.dir/link.txt --verbose=1
[ 80%] Linking CXX executable ../../../test-bin/Test_BamLoader_platform
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/bam-load && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_BamLoader_platform.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Drivertool_SDLResponse.dir/link.d "CMakeFiles/Test_Drivertool_SDLResponse.dir/test-sdl-response.cpp.o" -o ../../../test-bin/Test_Drivertool_SDLResponse
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 80%] Built target Test_Drivertool_SDLResponse
make  -f test/loaders/loader/CMakeFiles/Test_LOADER.dir/build.make test/loaders/loader/CMakeFiles/Test_LOADER.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/loader/CMakeFiles/Test_LOADER.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/loader/CMakeFiles/Test_LOADER.dir/build.make test/loaders/loader/CMakeFiles/Test_LOADER.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_BamLoader_platform.dir/link.d "CMakeFiles/Test_BamLoader_platform.dir/sam-platform.cpp.o" -o ../../../test-bin/Test_BamLoader_platform
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 80%] Building CXX object test/loaders/loader/CMakeFiles/Test_LOADER.dir/loadertest.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/loaders/loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/loaders/loader/CMakeFiles/Test_LOADER.dir/loadertest.cpp.o -MF CMakeFiles/Test_LOADER.dir/loadertest.cpp.o.d -o CMakeFiles/Test_LOADER.dir/loadertest.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/loader/loadertest.cpp
[ 80%] Built target Test_BamLoader_platform
make  -f test/loaders/sharq/CMakeFiles/test-regexpr.dir/build.make test/loaders/sharq/CMakeFiles/test-regexpr.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/sharq /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/sharq/CMakeFiles/test-regexpr.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/sharq/CMakeFiles/test-regexpr.dir/build.make test/loaders/sharq/CMakeFiles/test-regexpr.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 80%] Building CXX object test/loaders/sharq/CMakeFiles/test-regexpr.dir/test-regexpr.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/sharq && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib/include -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/loaders/sharq/CMakeFiles/test-regexpr.dir/test-regexpr.cpp.o -MF CMakeFiles/test-regexpr.dir/test-regexpr.cpp.o.d -o CMakeFiles/test-regexpr.dir/test-regexpr.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/test-regexpr.cpp
/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/loader/loadertest.cpp:307:117: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  307 |         REQUIRE_RC ( KLoaderMeta_Write ( node, LoaderName.c_str(), __DATE__, FormatterName.c_str(), KAppVersion() ) );
      |                                                                                                                     ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/loader/loadertest.cpp:321:80: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  321 |     REQUIRE_EQ ( string ( __DATE__), GetMetadata ( "SOFTWARE/loader", "date" ) );
      |                                                                                ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/loader/loadertest.cpp:350:143: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  350 |         REQUIRE_RC ( KLoaderMeta_WriteWithVersion ( node, LoaderName.c_str(), __DATE__, LoaderVersion, FormatterName.c_str(), KAppVersion() ) );
      |                                                                                                                                               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/loader/loadertest.cpp:364:80: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  364 |     REQUIRE_EQ ( string ( __DATE__), GetMetadata ( "SOFTWARE/loader", "date" ) );
      |                                                                                ^
[ 80%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/command-line.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/command-line.cpp.o -MF CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/command-line.cpp.o.d -o CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/command-line.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/command-line.cpp
[ 80%] Linking CXX executable ../../../test-bin/Test_VdbValidate_Unit
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-validate && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_VdbValidate_Unit.dir/link.txt --verbose=1
[ 80%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/run-source.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/run-source.cpp.o -MF CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/run-source.cpp.o.d -o CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/run-source.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/run-source.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_VdbValidate_Unit.dir/link.d "CMakeFiles/Test_VdbValidate_Unit.dir/test-vdb-validate.cpp.o" -o ../../../test-bin/Test_VdbValidate_Unit  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 80%] Built target Test_VdbValidate_Unit
make  -f test/internal/align/CMakeFiles/Test_Align_samextract.dir/build.make test/internal/align/CMakeFiles/Test_Align_samextract.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/align /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/align /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/align/CMakeFiles/Test_Align_samextract.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/internal/align/CMakeFiles/Test_Align_samextract.dir/build.make test/internal/align/CMakeFiles/Test_Align_samextract.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 80%] Building CXX object test/internal/align/CMakeFiles/Test_Align_samextract.dir/test-samextract.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/align && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/internal/align\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/usr/include/ncbi-vdb/ext -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/../ncbi-vdb/interfaces/ext -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/internal/align/CMakeFiles/Test_Align_samextract.dir/test-samextract.cpp.o -MF CMakeFiles/Test_Align_samextract.dir/test-samextract.cpp.o.d -o CMakeFiles/Test_Align_samextract.dir/test-samextract.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/align/test-samextract.cpp
[ 80%] Building C object test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-view-spec.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/external/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-view-spec.c.o -MF CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-view-spec.c.o.d -o CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-view-spec.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump/vdb-dump-view-spec.c
In file included from /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/sratools.hpp:31,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/run-source.hpp:39,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/run-source.cpp:51:
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/accession.hpp: In static member function 'static const char* sratools::Accession::qualityTypeFor(const char*)':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/accession.hpp:82:56: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                                                        ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/accession.hpp:82:38: note: the temporary was destroyed at the end of the full expression 'make_sequence<const char**>((& sratools::Accession::extensions[1]), 3)'
   82 |         for (auto ext : make_sequence(&extensions[1], 3)) {
      |                         ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 81%] Building C object test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-helper.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/external/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-helper.c.o -MF CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-helper.c.o.d -o CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-helper.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump/vdb-dump-helper.c
[ 81%] Building C object test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-context.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/external/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-context.c.o -MF CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-context.c.o.d -o CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-context.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump/vdb-dump-context.c
[ 82%] Linking CXX executable ../../../test-bin/Test_LOADER
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_LOADER.dir/link.txt --verbose=1
[ 82%] Linking CXX executable ../../../test-bin/Test_LOADERFILE
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_LOADERFILE.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_LOADER.dir/link.d CMakeFiles/Test_LOADER.dir/loadertest.cpp.o -o ../../../test-bin/Test_LOADER  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 82%] Built target Test_LOADER
make  -f test/internal/align-cache/CMakeFiles/Build-align-cache.dir/build.make test/internal/align-cache/CMakeFiles/Build-align-cache.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/align-cache /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/align-cache /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/align-cache/CMakeFiles/Build-align-cache.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/internal/align-cache/CMakeFiles/Build-align-cache.dir/build.make test/internal/align-cache/CMakeFiles/Build-align-cache.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/internal/align-cache/CMakeFiles/Build-align-cache.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 82%] Building C object test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-coldefs.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/external/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-coldefs.c.o -MF CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-coldefs.c.o.d -o CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-coldefs.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump/vdb-dump-coldefs.c
[ 82%] Built target Build-align-cache
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_LOADERFILE.dir/link.d "CMakeFiles/Test_LOADERFILE.dir/test-loaderfile.cpp.o" -o ../../../test-bin/Test_LOADERFILE  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make  -f test/internal/copycat/CMakeFiles/Build-copycat.dir/build.make test/internal/copycat/CMakeFiles/Build-copycat.dir/depend
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 82%] Built target Test_LOADERFILE
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/copycat /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/copycat /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/copycat/CMakeFiles/Build-copycat.dir/DependInfo.cmake "--color="
make  -f test/internal/copycat/CMakeFiles/Test_KFF.dir/build.make test/internal/copycat/CMakeFiles/Test_KFF.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/copycat /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/copycat /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/copycat/CMakeFiles/Test_KFF.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/internal/copycat/CMakeFiles/Build-copycat.dir/build.make test/internal/copycat/CMakeFiles/Build-copycat.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/internal/copycat/CMakeFiles/Build-copycat.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/internal/copycat/CMakeFiles/Test_KFF.dir/build.make test/internal/copycat/CMakeFiles/Test_KFF.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 82%] Built target Build-copycat
make  -f test/internal/make-read-filter/CMakeFiles/Build-make-read-filter.dir/build.make test/internal/make-read-filter/CMakeFiles/Build-make-read-filter.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/make-read-filter /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/make-read-filter /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/make-read-filter/CMakeFiles/Build-make-read-filter.dir/DependInfo.cmake "--color="
[ 82%] Building CXX object test/internal/copycat/CMakeFiles/Test_KFF.dir/kfftest.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/copycat && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/internal/copycat/CMakeFiles/Test_KFF.dir/kfftest.cpp.o -MF CMakeFiles/Test_KFF.dir/kfftest.cpp.o.d -o CMakeFiles/Test_KFF.dir/kfftest.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/copycat/kfftest.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/internal/make-read-filter/CMakeFiles/Build-make-read-filter.dir/build.make test/internal/make-read-filter/CMakeFiles/Build-make-read-filter.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/internal/make-read-filter/CMakeFiles/Build-make-read-filter.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 82%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/build-version.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/build-version.cpp.o -MF CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/build-version.cpp.o.d -o CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/build-version.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/build-version.cpp
[ 82%] Built target Build-make-read-filter
make  -f test/internal/read-filter-redact/CMakeFiles/Build-read-filter-redact.dir/build.make test/internal/read-filter-redact/CMakeFiles/Build-read-filter-redact.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/read-filter-redact /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/read-filter-redact /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/read-filter-redact/CMakeFiles/Build-read-filter-redact.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/internal/read-filter-redact/CMakeFiles/Build-read-filter-redact.dir/build.make test/internal/read-filter-redact/CMakeFiles/Build-read-filter-redact.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/internal/read-filter-redact/CMakeFiles/Build-read-filter-redact.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 82%] Built target Build-read-filter-redact
make  -f test/internal/vdb-copy/CMakeFiles/Build-vdb-copy.dir/build.make test/internal/vdb-copy/CMakeFiles/Build-vdb-copy.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/vdb-copy /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/vdb-copy /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/vdb-copy/CMakeFiles/Build-vdb-copy.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/internal/vdb-copy/CMakeFiles/Build-vdb-copy.dir/build.make test/internal/vdb-copy/CMakeFiles/Build-vdb-copy.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/internal/vdb-copy/CMakeFiles/Build-vdb-copy.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 82%] Built target Build-vdb-copy
make  -f test/internal/vdb-diff/CMakeFiles/Build-vdb-diff.dir/build.make test/internal/vdb-diff/CMakeFiles/Build-vdb-diff.dir/depend
[ 82%] Linking CXX executable ../../../test-bin/test-vdb-config-model
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-config && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-vdb-config-model.dir/link.txt --verbose=1
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/vdb-diff /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/vdb-diff /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/vdb-diff/CMakeFiles/Build-vdb-diff.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/internal/vdb-diff/CMakeFiles/Build-vdb-diff.dir/build.make test/internal/vdb-diff/CMakeFiles/Build-vdb-diff.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/internal/vdb-diff/CMakeFiles/Build-vdb-diff.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 82%] Built target Build-vdb-diff
make  -f test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Input.dir/build.make test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Input.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/test-tools/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Input.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Input.dir/build.make test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Input.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 82%] Building CXX object test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Input.dir/test-input.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/test-tools/qa-stats && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Input.dir/test-input.cpp.o -MF CMakeFiles/Test_qa-stats_Input.dir/test-input.cpp.o.d -o CMakeFiles/Test_qa-stats_Input.dir/test-input.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/test-input.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-vdb-config-model.dir/link.d "CMakeFiles/test-vdb-config-model.dir/test-vdb-config-model.cpp.o" -o ../../../test-bin/test-vdb-config-model  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 82%] Built target test-vdb-config-model
make  -f test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Output.dir/build.make test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Output.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/test-tools/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Output.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Output.dir/build.make test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Output.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 82%] Building CXX object test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Output.dir/test-output.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/test-tools/qa-stats && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Output.dir/test-output.cpp.o -MF CMakeFiles/Test_qa-stats_Output.dir/test-output.cpp.o.d -o CMakeFiles/Test_qa-stats_Output.dir/test-output.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/test-output.cpp
[ 82%] Building C object test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-str.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/external/vdb-dump\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT test/external/vdb-dump/CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-str.c.o -MF CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-str.c.o.d -o CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-str.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-dump/vdb-dump-str.c
[ 82%] Linking CXX executable ../../../test-bin/test-regexpr
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/sharq && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-regexpr.dir/link.txt --verbose=1
[ 82%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/file-path.posix.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/file-path.posix.cpp.o -MF CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/file-path.posix.cpp.o.d -o CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/file-path.posix.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/file-path.posix.cpp
[ 82%] Linking CXX executable ../../../test-bin/Test_Vdb_dump_view-spec
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-dump && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Vdb_dump_view-spec.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-regexpr.dir/link.d "CMakeFiles/test-regexpr.dir/test-regexpr.cpp.o" -o ../../../test-bin/test-regexpr  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto -lre2 -labsl_string_view
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 82%] Built target test-regexpr
make  -f test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Fingerprint.dir/build.make test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Fingerprint.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/test-tools/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Fingerprint.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Fingerprint.dir/build.make test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Fingerprint.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Vdb_dump_view-spec.dir/link.d "CMakeFiles/Test_Vdb_dump_view-spec.dir/test-view-spec.cpp.o" "CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-view-spec.c.o" "CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-helper.c.o" "CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-context.c.o" "CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-coldefs.c.o" "CMakeFiles/Test_Vdb_dump_view-spec.dir/__/__/__/tools/external/vdb-dump/vdb-dump-str.c.o" -o ../../../test-bin/Test_Vdb_dump_view-spec  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 82%] Built target Test_Vdb_dump_view-spec
make  -f test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Hashing.dir/build.make test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Hashing.dir/depend
[ 82%] Building CXX object test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Fingerprint.dir/test-finger.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/test-tools/qa-stats && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Fingerprint.dir/test-finger.cpp.o -MF CMakeFiles/Test_qa-stats_Fingerprint.dir/test-finger.cpp.o.d -o CMakeFiles/Test_qa-stats_Fingerprint.dir/test-finger.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/test-finger.cpp
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/test-tools/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Hashing.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Hashing.dir/build.make test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Hashing.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 82%] Building C object test/internal/copycat/CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffext.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT test/internal/copycat/CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffext.c.o -MF CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffext.c.o.d -o CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffext.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/kff/ffext.c
[ 83%] Building CXX object test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Hashing.dir/test-hashing.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/test-tools/qa-stats && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Hashing.dir/test-hashing.cpp.o -MF CMakeFiles/Test_qa-stats_Hashing.dir/test-hashing.cpp.o.d -o CMakeFiles/Test_qa-stats_Hashing.dir/test-hashing.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/test-hashing.cpp
[ 83%] Building C object test/internal/copycat/CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffkey.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT test/internal/copycat/CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffkey.c.o -MF CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffkey.c.o.d -o CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffkey.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/kff/ffkey.c
[ 83%] Building C object test/internal/copycat/CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/fileformat.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT test/internal/copycat/CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/fileformat.c.o -MF CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/fileformat.c.o.d -o CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/fileformat.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/kff/fileformat.c
[ 83%] Building C object test/internal/copycat/CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffmagic.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/copycat && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/internal/copycat\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT test/internal/copycat/CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffmagic.c.o -MF CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffmagic.c.o.d -o CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffmagic.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/copycat/kff/ffmagic.c
[ 83%] Linking CXX executable ../../../test-bin/Test_Align_samextract
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/align && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Align_samextract.dir/link.txt --verbose=1
[ 83%] Linking CXX executable ../../../test-bin/Test_KFF
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/copycat && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_KFF.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_KFF.dir/link.d CMakeFiles/Test_KFF.dir/kfftest.cpp.o CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffext.c.o CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffkey.c.o CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/fileformat.c.o CMakeFiles/Test_KFF.dir/__/__/__/tools/internal/copycat/kff/ffmagic.c.o -o ../../../test-bin/Test_KFF  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto -lmagic
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 83%] Built target Test_KFF
make  -f ngs/ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/build.make ngs/ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-c++ /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-c++ /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/build.make ngs/ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/build
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Align_samextract.dir/link.d "CMakeFiles/Test_Align_samextract.dir/test-samextract.cpp.o" -o ../../../test-bin/Test_Align_samextract  -lsam-extract /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 83%] Building CXX object ngs/ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/NCBI-NGS.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-c++ && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"ngs/ncbi/ngs-c++\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIC   -rdynamic -MD -MT ngs/ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/NCBI-NGS.cpp.o -MF CMakeFiles/ncbi-ngs-c++.dir/NCBI-NGS.cpp.o.d -o CMakeFiles/ncbi-ngs-c++.dir/NCBI-NGS.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs-c++/NCBI-NGS.cpp
[ 83%] Built target Test_Align_samextract
make  -f ngs/ngs-java/CMakeFiles/ngs-doc-jar.dir/build.make ngs/ngs-java/CMakeFiles/ngs-doc-jar.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-doc-jar.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-java/CMakeFiles/ngs-doc-jar.dir/build.make ngs/ngs-java/CMakeFiles/ngs-doc-jar.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/javadoc/ngs-doc && sh -c /usr/bin/jar\ -cf\ /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib/ngs-doc.jar\ .
[ 83%] Linking CXX executable ../../../test-bin/Test_Drivertool_ToolArgs
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Drivertool_ToolArgs.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Drivertool_ToolArgs.dir/link.d "CMakeFiles/Test_Drivertool_ToolArgs.dir/test-tool-args.cpp.o" "CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/tool-args.cpp.o" "CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/command-line.cpp.o" "CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/build-version.cpp.o" "CMakeFiles/Test_Drivertool_ToolArgs.dir/__/__/__/tools/external/driver-tool/file-path.posix.cpp.o" -o ../../../test-bin/Test_Drivertool_ToolArgs  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 83%] Built target Test_Drivertool_ToolArgs
make  -f ngs/ngs-java/CMakeFiles/ngs-src-jar.dir/build.make ngs/ngs-java/CMakeFiles/ngs-src-jar.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/CMakeFiles/ngs-src-jar.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 83%] Built target ngs-doc-jar
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-java/CMakeFiles/ngs-src-jar.dir/build.make ngs/ngs-java/CMakeFiles/ngs-src-jar.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir/build.make ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir/depend
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java && sh -c /usr/bin/jar\ -cf\ /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib/ngs-src.jar\ \ ngs/ErrorMsg.java\ ngs/Statistics.java\ ngs/Fragment.java\ ngs/FragmentIterator.java\ ngs/Read.java\ ngs/ReadIterator.java\ ngs/ReadGroup.java\ ngs/ReadGroupIterator.java\ ngs/Alignment.java\ ngs/AlignmentIterator.java\ ngs/PileupEvent.java\ ngs/PileupEventIterator.java\ ngs/Pileup.java\ ngs/PileupIterator.java\ ngs/Reference.java\ ngs/ReferenceIterator.java\ ngs/ReadCollection.java\ ngs/Package.java\ ngs/itf/Refcount.java\ ngs/itf/StatisticsItf.java\ ngs/itf/FragmentItf.java\ ngs/itf/FragmentIteratorItf.java\ ngs/itf/ReadItf.java\ ngs/itf/ReadIteratorItf.java\ ngs/itf/ReadGroupItf.java\ ngs/itf/ReadGroupIteratorItf.java\ ngs/itf/AlignmentItf.java\ ngs/itf/AlignmentIteratorItf.java\ ngs/itf/PileupEventItf.java\ ngs/itf/PileupEventIteratorItf.java\ ngs/itf/PileupItf.java\ ngs/itf/PileupIteratorItf.java\ ngs/itf/ReferenceItf.java\ ngs/itf/ReferenceIteratorItf.java\ ngs/itf/ReadCollectionItf.java\ gov/nih/nlm/ncbi/ngs/DownloadManager.java\ gov/nih/nlm/ncbi/ngs/FileCreator.java\ gov/nih/nlm/ncbi/ngs/HttpManager.java\ gov/nih/nlm/ncbi/ngs/LibDependencies.java\ gov/nih/nlm/ncbi/ngs/LibManager.java\ gov/nih/nlm/ncbi/ngs/LibPathIterator.java\ gov/nih/nlm/ncbi/ngs/LibVersionChecker.java\ gov/nih/nlm/ncbi/ngs/LMProperties.java\ gov/nih/nlm/ncbi/ngs/Logger.java\ gov/nih/nlm/ncbi/ngs/Manager.java\ gov/nih/nlm/ncbi/ngs/NGS.java\ gov/nih/nlm/ncbi/ngs/Version.java\ gov/nih/nlm/ncbi/ngs/error/LibraryLoadError.java\ gov/nih/nlm/ncbi/ngs/error/LibraryNotFoundError.java\ gov/nih/nlm/ncbi/ngs/error/LibraryIncompatibleVersionError.java\ gov/nih/nlm/ncbi/ngs/error/cause/ConnectionProblemCause.java\ gov/nih/nlm/ncbi/ngs/error/cause/DownloadDisabledCause.java\ gov/nih/nlm/ncbi/ngs/error/cause/InvalidLibraryCause.java\ gov/nih/nlm/ncbi/ngs/error/cause/JvmErrorCause.java\ gov/nih/nlm/ncbi/ngs/error/cause/LibraryLoadCause.java\ gov/nih/nlm/ncbi/ngs/error/cause/OutdatedJarCause.java\ gov/nih/nlm/ncbi/ngs/error/cause/PrereleaseReqLibCause.java\ gov/nih/nlm/ncbi/ngs/error/cause/UnsupportedArchCause.java
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/examples /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/examples /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir/build.make ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 83%] Linking CXX static library ../../../lib/libncbi-ngs-c++.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-c++ && /usr/bin/cmake -P CMakeFiles/ncbi-ngs-c++.dir/cmake_clean_target.cmake
[ 83%] Building Java objects for ngs-examples.jar
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/examples && /usr/bin/cmake -DCMAKE_JAVA_CLASS_OUTPUT_PATH=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir -DCMAKE_JAR_CLASSES_PREFIX= -P /usr/share/cmake-3.31/Modules/UseJava/ClearClassFiles.cmake --log-level STATUS
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ncbi/ngs-c++ && /usr/bin/cmake -E cmake_link_script CMakeFiles/ncbi-ngs-c++.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/examples && /usr/bin/javac -classpath :/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/examples:/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib:/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib/ngs-java.jar -d /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir @/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir/java_sources
/usr/bin/ar qc ../../../lib/libncbi-ngs-c++.a "CMakeFiles/ncbi-ngs-c++.dir/NCBI-NGS.cpp.o"
/usr/bin/ranlib ../../../lib/libncbi-ngs-c++.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib && rm -f libncbi-ngs-c++.a.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib && mv libncbi-ngs-c++.a libncbi-ngs-c++.a.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib && ln -f -s libncbi-ngs-c++.a.3.2.1 libncbi-ngs-c++.a.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib && ln -f -s libncbi-ngs-c++.a.3 libncbi-ngs-c++.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib && ln -f -s libncbi-ngs-c++.a libncbi-ngs-c++-static.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 83%] Built target ncbi-ngs-c++
make  -f libs/general-writer/CMakeFiles/gw-dumper.dir/build.make libs/general-writer/CMakeFiles/gw-dumper.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/general-writer /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/general-writer /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/general-writer/CMakeFiles/gw-dumper.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/general-writer/CMakeFiles/gw-dumper.dir/build.make libs/general-writer/CMakeFiles/gw-dumper.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 83%] Building CXX object libs/general-writer/CMakeFiles/gw-dumper.dir/gw-dumper.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/general-writer && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT libs/general-writer/CMakeFiles/gw-dumper.dir/gw-dumper.cpp.o -MF CMakeFiles/gw-dumper.dir/gw-dumper.cpp.o.d -o CMakeFiles/gw-dumper.dir/gw-dumper.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/general-writer/gw-dumper.cpp
[ 83%] Building CXX object test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Input.dir/__/__/__/tools/test-tools/qa-stats/input.cpp.o
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/test-tools/qa-stats && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/test-tools/qa-stats/CMakeFiles/Test_qa-stats_Input.dir/__/__/__/tools/test-tools/qa-stats/input.cpp.o -MF CMakeFiles/Test_qa-stats_Input.dir/__/__/__/tools/test-tools/qa-stats/input.cpp.o.d -o CMakeFiles/Test_qa-stats_Input.dir/__/__/__/tools/test-tools/qa-stats/input.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/qa-stats/input.cpp
[ 83%] Built target ngs-src-jar
make  -f libs/general-writer/test/CMakeFiles/test-general-writer.dir/build.make libs/general-writer/test/CMakeFiles/test-general-writer.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/general-writer/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/general-writer/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/general-writer/test/CMakeFiles/test-general-writer.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/general-writer/test/CMakeFiles/test-general-writer.dir/build.make libs/general-writer/test/CMakeFiles/test-general-writer.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 83%] Building CXX object libs/general-writer/test/CMakeFiles/test-general-writer.dir/test-general-writer.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/general-writer/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT libs/general-writer/test/CMakeFiles/test-general-writer.dir/test-general-writer.cpp.o -MF CMakeFiles/test-general-writer.dir/test-general-writer.cpp.o.d -o CMakeFiles/test-general-writer.dir/test-general-writer.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/general-writer/test/test-general-writer.cpp
[ 83%] Linking CXX executable ../../../test-bin/Test_SraInfo_Unit
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/sra-info && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_SraInfo_Unit.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_SraInfo_Unit.dir/link.d "CMakeFiles/Test_SraInfo_Unit.dir/test-sra-info.cpp.o" -o ../../../test-bin/Test_SraInfo_Unit  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/examples && /usr/bin/cmake -E touch /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir/java_compiled_ngs-examples
[ 83%] Built target Test_SraInfo_Unit
make  -f tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/build.make tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/build.make tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/build
[ 83%] Generating CMakeFiles/ngs-examples.dir/java_class_filelist
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-java/examples && /usr/bin/cmake -DCMAKE_JAVA_CLASS_OUTPUT_PATH=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir -DCMAKE_JAR_CLASSES_PREFIX= -P /usr/share/cmake-3.31/Modules/UseJava/ClassFilelist.cmake
[ 83%] Building C object tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/spot-assembler.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/spot-assembler.c.o -MF CMakeFiles/latf-load.dir/spot-assembler.c.o.d -o CMakeFiles/latf-load.dir/spot-assembler.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader/spot-assembler.c
[ 83%] Creating Java archive ngs-examples.jar
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir && /usr/bin/jar -cf /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib/ngs-examples.jar @java_class_filelist
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/general-writer/test/test-general-writer.cpp: In function 'void ncbi::runTest(int, const char**, const char*, const char*)':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/general-writer/test/test-general-writer.cpp:295:20: warning: 'gw' may be used uninitialized [-Wmaybe-uninitialized]
  295 |             delete gw;
      |                    ^~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/general-writer/test/test-general-writer.cpp:232:24: note: 'gw' was declared here
  232 |         GeneralWriter *gw;
      |                        ^~
[ 83%] Linking CXX executable ../../../test-bin/Test_qa-stats_Fingerprint
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/test-tools/qa-stats && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_qa-stats_Fingerprint.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-java/examples/CMakeFiles/ngs-examples.dir && /usr/bin/cmake -D_JAVA_TARGET_DIR=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib -D_JAVA_TARGET_OUTPUT_NAME=ngs-examples.jar -D_JAVA_TARGET_OUTPUT_LINK= -P /usr/share/cmake-3.31/Modules/UseJava/Symlinks.cmake
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 83%] Built target ngs-examples
make  -f tools/loaders/sharq/CMakeFiles/sharq.dir/build.make tools/loaders/sharq/CMakeFiles/sharq.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sharq /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sharq /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sharq/CMakeFiles/sharq.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/sharq/CMakeFiles/sharq.dir/build.make tools/loaders/sharq/CMakeFiles/sharq.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 83%] Building C object tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/common-writer.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/common-writer.c.o -MF CMakeFiles/latf-load.dir/common-writer.c.o.d -o CMakeFiles/latf-load.dir/common-writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader/common-writer.c
[ 83%] Linking CXX executable ../../../test-bin/test-general-writer
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/general-writer/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-general-writer.dir/link.txt --verbose=1
[ 83%] Building CXX object tools/loaders/sharq/CMakeFiles/sharq.dir/fastq_parse.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sharq && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib/include -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sharq/. -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sharq/../../.. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/loaders/sharq/CMakeFiles/sharq.dir/fastq_parse.cpp.o -MF CMakeFiles/sharq.dir/fastq_parse.cpp.o.d -o CMakeFiles/sharq.dir/fastq_parse.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sharq/fastq_parse.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_qa-stats_Fingerprint.dir/link.d "CMakeFiles/Test_qa-stats_Fingerprint.dir/test-finger.cpp.o" -o ../../../test-bin/Test_qa-stats_Fingerprint  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 83%] Built target Test_qa-stats_Fingerprint
make  -f tools/loaders/general-loader/test/CMakeFiles/Build-general-loader.dir/build.make tools/loaders/general-loader/test/CMakeFiles/Build-general-loader.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/CMakeFiles/Build-general-loader.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/general-loader/test/CMakeFiles/Build-general-loader.dir/build.make tools/loaders/general-loader/test/CMakeFiles/Build-general-loader.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'tools/loaders/general-loader/test/CMakeFiles/Build-general-loader.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 83%] Built target Build-general-loader
make  -f tools/external/vdb-config/CMakeFiles/vdb-config.dir/build.make tools/external/vdb-config/CMakeFiles/vdb-config.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config/CMakeFiles/vdb-config.dir/DependInfo.cmake "--color="
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-general-writer.dir/link.d "CMakeFiles/test-general-writer.dir/test-general-writer.cpp.o" -o ../../../test-bin/test-general-writer  ../../../ilib/libgeneral-writer.a -Wl,-Bstatic -lktst -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 83%] Built target test-general-writer
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/vdb-config/CMakeFiles/vdb-config.dir/build.make tools/external/vdb-config/CMakeFiles/vdb-config.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-sdk/CMakeFiles/ngs-c++.dir/build.make ngs/ngs-sdk/CMakeFiles/ngs-c++.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/CMakeFiles/ngs-c++.dir/DependInfo.cmake "--color="
[ 83%] Building CXX object tools/external/vdb-config/CMakeFiles/vdb-config.dir/configure.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-config\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/vdb-config/CMakeFiles/vdb-config.dir/configure.cpp.o -MF CMakeFiles/vdb-config.dir/configure.cpp.o.d -o CMakeFiles/vdb-config.dir/configure.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/configure.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-sdk/CMakeFiles/ngs-c++.dir/build.make ngs/ngs-sdk/CMakeFiles/ngs-c++.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 83%] Linking CXX static library ../../lib/libngs-c++.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk && /usr/bin/cmake -P CMakeFiles/ngs-c++.dir/cmake_clean_target.cmake
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-c++.dir/link.txt --verbose=1
/usr/bin/ar qc ../../lib/libngs-c++.a "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadCollection.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceSequence.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Reference.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Pileup.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEventIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEvent.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/AlignmentIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Alignment.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroupIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroup.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Read.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/FragmentIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Fragment.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Statistics.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/StringRef.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReadCollectionItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReferenceItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReferenceSequenceItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PileupItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PileupEventItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/AlignmentItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReadGroupItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReadItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/FragmentItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/StatisticsItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PackageItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/StringItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/Refcount.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/VTable.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ErrBlock.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ErrorMsg.cpp.o" "../ncbi/ngs/CMakeFiles/ngs.dir/NCBI-NGS.c.o" ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_PileupEvent.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Pileup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Alignment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReferenceWindow.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Reference.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/EBI_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_Statistics.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_DB_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroupInfo.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Statistics.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_PileupEvent.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Pileup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadGroup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Alignment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Reference.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Fragment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Cursor.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Refcount.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_String.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Id.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ErrBlock.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlob.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlobIterator.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlob.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlobIterator.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/VByteBlob.c.o "../ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/NCBI-NGS.cpp.o" "../ncbi/ngs-py/CMakeFiles/ngs-py.dir/py_Manager.c.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_Manager.c.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_String.c.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_ErrorMsg.c.o"
/usr/bin/ranlib ../../lib/libngs-c++.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib && rm -f libngs-c++.a.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib && mv libngs-c++.a libngs-c++.a.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib && ln -f -s libngs-c++.a.3.2.1 libngs-c++.a.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib && ln -f -s libngs-c++.a.3 libngs-c++.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib && ln -f -s libngs-c++.a libngs-c++-static.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 83%] Built target ngs-c++
make  -f ngs/ngs-sdk/CMakeFiles/ngs-c++-shared.dir/build.make ngs/ngs-sdk/CMakeFiles/ngs-c++-shared.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/CMakeFiles/ngs-c++-shared.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-sdk/CMakeFiles/ngs-c++-shared.dir/build.make ngs/ngs-sdk/CMakeFiles/ngs-c++-shared.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 83%] Linking CXX shared library ../../lib/libngs-c++.so
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-c++-shared.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,--dependency-file=CMakeFiles/ngs-c++-shared.dir/link.d -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libngs-c++.so.3 -o ../../lib/libngs-c++.so.3.2.1 "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadCollection.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceSequence.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Reference.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Pileup.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEventIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEvent.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/AlignmentIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Alignment.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroupIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroup.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Read.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/FragmentIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Fragment.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Statistics.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/StringRef.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReadCollectionItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReferenceItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReferenceSequenceItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PileupItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PileupEventItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/AlignmentItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReadGroupItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReadItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/FragmentItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/StatisticsItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PackageItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/StringItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/Refcount.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/VTable.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ErrBlock.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ErrorMsg.cpp.o" "../ncbi/ngs/CMakeFiles/ngs.dir/NCBI-NGS.c.o" ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_PileupEvent.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Pileup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Alignment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReferenceWindow.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Reference.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/EBI_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_Statistics.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_DB_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroupInfo.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Statistics.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_PileupEvent.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Pileup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadGroup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Alignment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Reference.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Fragment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Cursor.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Refcount.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_String.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Id.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ErrBlock.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlob.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlobIterator.c.o ../ncbi/ngs/CMake[ 83%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/command-line.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/command-line.cpp.o -MF CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/command-line.cpp.o.d -o CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/command-line.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/command-line.cpp
Files/ngs.dir/NGS_ReferenceBlob.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlobIterator.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/VByteBlob.c.o "../ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/NCBI-NGS.cpp.o" "../ncbi/ngs-py/CMakeFiles/ngs-py.dir/py_Manager.c.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_Manager.c.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_String.c.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_ErrorMsg.c.o"
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk && /usr/bin/cmake -E cmake_symlink_library ../../lib/libngs-c++.so.3.2.1 ../../lib/libngs-c++.so.3 ../../lib/libngs-c++.so
[ 83%] Building C object tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/sequence-writer.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/sequence-writer.c.o -MF CMakeFiles/latf-load.dir/sequence-writer.c.o.d -o CMakeFiles/latf-load.dir/sequence-writer.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader/sequence-writer.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 83%] Built target ngs-c++-shared
make  -f ngs/ngs-sdk/CMakeFiles/ncbi-ngs.dir/build.make ngs/ngs-sdk/CMakeFiles/ncbi-ngs.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/CMakeFiles/ncbi-ngs.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-sdk/CMakeFiles/ncbi-ngs.dir/build.make ngs/ngs-sdk/CMakeFiles/ncbi-ngs.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 83%] Linking CXX static library ../../lib/libncbi-ngs.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk && /usr/bin/cmake -P CMakeFiles/ncbi-ngs.dir/cmake_clean_target.cmake
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk && /usr/bin/cmake -E cmake_link_script CMakeFiles/ncbi-ngs.dir/link.txt --verbose=1
/usr/bin/ar qc ../../lib/libncbi-ngs.a "dispatch/CMakeFiles/ngs-disp.dir/ReadCollectionItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReferenceItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReferenceSequenceItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PileupItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PileupEventItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/AlignmentItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReadGroupItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReadItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/FragmentItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/StatisticsItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PackageItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/StringItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/Refcount.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/VTable.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ErrBlock.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ErrorMsg.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_AlignmentItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_AlignmentIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_FragmentItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_FragmentIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_PackageItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_PileupEventItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_PileupEventIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_PileupItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_PileupIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReadCollectionItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReadGroupItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReadGroupIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReadItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReadIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceSequenceItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_StatisticsItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_Refcount.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_StringItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadCollectionItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceSequenceItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupEventIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupEventItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_AlignmentIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_AlignmentItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadGroupIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadGroupItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_FragmentItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_StatisticsItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_Package.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_String.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_Refcount.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ErrorMsg.cpp.o" "../ncbi/ngs/CMakeFiles/ngs.dir/NCBI-NGS.c.o" ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_PileupEvent.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Pileup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Alignment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReferenceWindow.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Reference.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReadColle[ 84%] Building C object tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/common-reader.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/common-reader.c.o -MF CMakeFiles/latf-load.dir/common-reader.c.o.d -o CMakeFiles/latf-load.dir/common-reader.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader/common-reader.c
ction.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/EBI_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_Statistics.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_DB_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroupInfo.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Statistics.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_PileupEvent.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Pileup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadGroup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Alignment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Reference.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Fragment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Cursor.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Refcount.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_String.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Id.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ErrBlock.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlob.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlobIterator.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlob.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlobIterator.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/VByteBlob.c.o "../ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/NCBI-NGS.cpp.o" "../ncbi/ngs-py/CMakeFiles/ngs-py.dir/py_Manager.c.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadCollection.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceSequence.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Reference.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Pileup.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEventIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEvent.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/AlignmentIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Alignment.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroupIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroup.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Read.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/FragmentIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Fragment.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Statistics.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/StringRef.cpp.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_Manager.c.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_String.c.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_ErrorMsg.c.o"
/usr/bin/ranlib ../../lib/libncbi-ngs.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib && rm -f libncbi-ngs.a.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib && mv libncbi-ngs.a libncbi-ngs.a.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib && ln -f -s libncbi-ngs.a.3.2.1 libncbi-ngs.a.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib && ln -f -s libncbi-ngs.a.3 libncbi-ngs.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib && ln -f -s libncbi-ngs.a libncbi-ngs-static.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 84%] Built target ncbi-ngs
make  -f ngs/ngs-sdk/CMakeFiles/ncbi-ngs-shared.dir/build.make ngs/ngs-sdk/CMakeFiles/ncbi-ngs-shared.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/CMakeFiles/ncbi-ngs-shared.dir/DependInfo.cmake "--color="
[ 84%] Building C object tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/fastq-reader.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/fastq-reader.c.o -MF CMakeFiles/latf-load.dir/fastq-reader.c.o.d -o CMakeFiles/latf-load.dir/fastq-reader.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader/fastq-reader.c
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-sdk/CMakeFiles/ncbi-ngs-shared.dir/build.make ngs/ngs-sdk/CMakeFiles/ncbi-ngs-shared.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 84%] Linking CXX shared library ../../lib/libncbi-ngs.so
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk && /usr/bin/cmake -E cmake_link_script CMakeFiles/ncbi-ngs-shared.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,--dependency-file=CMakeFiles/ncbi-ngs-shared.dir/link.d -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libncbi-ngs.so.3 -o ../../lib/libncbi-ngs.so.3.2.1 "dispatch/CMakeFiles/ngs-disp.dir/ReadCollectionItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReferenceItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReferenceSequenceItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PileupItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PileupEventItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/AlignmentItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReadGroupItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ReadItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/FragmentItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/StatisticsItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/PackageItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/StringItf.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/Refcount.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/VTable.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ErrBlock.cpp.o" "dispatch/CMakeFiles/ngs-disp.dir/ErrorMsg.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_AlignmentItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_AlignmentIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_FragmentItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_FragmentIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_PackageItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_PileupEventItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_PileupEventIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_PileupItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_PileupIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReadCollectionItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReadGroupItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReadGroupIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReadItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReadIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceIteratorItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_ReferenceSequenceItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_StatisticsItf.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_Refcount.cpp.o" "language/python/CMakeFiles/ngs-bind-python.dir/py_StringItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadCollectionItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReferenceSequenceItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupEventIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_PileupEventItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_AlignmentIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_AlignmentItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadGroupIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadGroupItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadIteratorItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_ReadItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_FragmentItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_StatisticsItf.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_Package.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_String.cpp.o" "language/java/CMakeFiles/ngs-bind-java.dir/jni_Refcount.cpp.o" "langua[ 84%] Building C object tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/zz_fastq-grammar.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/zz_fastq-grammar.c.o -MF CMakeFiles/latf-load.dir/zz_fastq-grammar.c.o.d -o CMakeFiles/latf-load.dir/zz_fastq-grammar.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader/zz_fastq-grammar.c
ge/java/CMakeFiles/ngs-bind-java.dir/jni_ErrorMsg.cpp.o" "../ncbi/ngs/CMakeFiles/ngs.dir/NCBI-NGS.c.o" ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_PileupEvent.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Pileup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Alignment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReferenceWindow.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Reference.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/CSRA1_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/EBI_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_Statistics.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_DB_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadGroupInfo.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/SRA_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Statistics.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadCollection.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_PileupEvent.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Pileup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReadGroup.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Alignment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Reference.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceSequence.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Read.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Fragment.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Cursor.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Refcount.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_String.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_Id.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ErrBlock.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlob.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_FragmentBlobIterator.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlob.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/NGS_ReferenceBlobIterator.c.o ../ncbi/ngs/CMakeFiles/ngs.dir/VByteBlob.c.o "../ncbi/ngs-c++/CMakeFiles/ncbi-ngs-c++.dir/NCBI-NGS.cpp.o" "../ncbi/ngs-py/CMakeFiles/ngs-py.dir/py_Manager.c.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadCollection.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceSequence.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReferenceIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Reference.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Pileup.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEventIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/PileupEvent.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/AlignmentIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Alignment.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroupIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadGroup.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/ReadIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Read.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/FragmentIterator.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Fragment.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/Statistics.cpp.o" "language/c++/CMakeFiles/ngs-bind-c++.dir/StringRef.cpp.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_Manager.c.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_String.c.o" "../ncbi/ngs-jni/CMakeFiles/ngs-jni.dir/jni_ErrorMsg.c.o"  /usr/lib/aarch64-linux-gnu/libkapp.a ../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk && /usr/bin/cmake -E cmake_symlink_library ../../lib/libncbi-ngs.so.3.2.1 ../../lib/libncbi-ngs.so.3 ../../lib/libncbi-ngs.so
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 84%] Built target ncbi-ngs-shared
make  -f ngs/ngs-sdk/examples/CMakeFiles/FragTest.dir/build.make ngs/ngs-sdk/examples/CMakeFiles/FragTest.dir/depend
[ 84%] Linking CXX executable ../../../test-bin/Test_qa-stats_Output
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/test-tools/qa-stats && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_qa-stats_Output.dir/link.txt --verbose=1
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/examples /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples/CMakeFiles/FragTest.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-sdk/examples/CMakeFiles/FragTest.dir/build.make ngs/ngs-sdk/examples/CMakeFiles/FragTest.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 84%] Building CXX object ngs/ngs-sdk/examples/CMakeFiles/FragTest.dir/FragTest.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT ngs/ngs-sdk/examples/CMakeFiles/FragTest.dir/FragTest.cpp.o -MF CMakeFiles/FragTest.dir/FragTest.cpp.o.d -o CMakeFiles/FragTest.dir/FragTest.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/examples/FragTest.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_qa-stats_Output.dir/link.d "CMakeFiles/Test_qa-stats_Output.dir/test-output.cpp.o" -o ../../../test-bin/Test_qa-stats_Output  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 84%] Built target Test_qa-stats_Output
make  -f ngs/ngs-sdk/examples/CMakeFiles/AlignTest.dir/build.make ngs/ngs-sdk/examples/CMakeFiles/AlignTest.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/examples /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples/CMakeFiles/AlignTest.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-sdk/examples/CMakeFiles/AlignTest.dir/build.make ngs/ngs-sdk/examples/CMakeFiles/AlignTest.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 84%] Building CXX object ngs/ngs-sdk/examples/CMakeFiles/AlignTest.dir/AlignTest.cpp.o
[ 84%] Building C object tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/zz_fastq-lex.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT ngs/ngs-sdk/examples/CMakeFiles/AlignTest.dir/AlignTest.cpp.o -MF CMakeFiles/AlignTest.dir/AlignTest.cpp.o.d -o CMakeFiles/AlignTest.dir/AlignTest.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/examples/AlignTest.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -Wno-misleading-indentation -MD -MT tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/zz_fastq-lex.c.o -MF CMakeFiles/latf-load.dir/zz_fastq-lex.c.o.d -o CMakeFiles/latf-load.dir/zz_fastq-lex.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader/zz_fastq-lex.c
[ 85%] Building CXX object tools/external/vdb-config/CMakeFiles/vdb-config.dir/util.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-config\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/vdb-config/CMakeFiles/vdb-config.dir/util.cpp.o -MF CMakeFiles/vdb-config.dir/util.cpp.o.d -o CMakeFiles/vdb-config.dir/util.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/util.cpp
[ 85%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/SDL-response.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/SDL-response.cpp.o -MF CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/SDL-response.cpp.o.d -o CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/SDL-response.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/SDL-response.cpp
[ 85%] Linking CXX executable ../../../test-bin/FragTest
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/FragTest.dir/link.txt --verbose=1
[ 85%] Building C object tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/id2name.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/id2name.c.o -MF CMakeFiles/latf-load.dir/id2name.c.o.d -o CMakeFiles/latf-load.dir/id2name.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader/id2name.c
[ 85%] Building C object tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/fastq-loader.c.o
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/FragTest.dir/link.d CMakeFiles/FragTest.dir/FragTest.cpp.o -o ../../../test-bin/FragTest  ../../../lib/libncbi-ngs.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/fastq-loader.c.o -MF CMakeFiles/latf-load.dir/fastq-loader.c.o.d -o CMakeFiles/latf-load.dir/fastq-loader.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader/fastq-loader.c
[ 85%] Built target FragTest
[ 85%] Linking CXX executable ../../../test-bin/AlignTest
make  -f ngs/ngs-sdk/examples/CMakeFiles/AlignSliceTest.dir/build.make ngs/ngs-sdk/examples/CMakeFiles/AlignSliceTest.dir/depend
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/AlignTest.dir/link.txt --verbose=1
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/examples /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples/CMakeFiles/AlignSliceTest.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 85%] Building CXX object ngs/ngs-sdk/examples/CMakeFiles/AlignSliceTest.dir/AlignSliceTest.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT ngs/ngs-sdk/examples/CMakeFiles/AlignSliceTest.dir/AlignSliceTest.cpp.o -MF CMakeFiles/AlignSliceTest.dir/AlignSliceTest.cpp.o.d -o CMakeFiles/AlignSliceTest.dir/AlignSliceTest.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/examples/AlignSliceTest.cpp
[ 85%] Linking CXX executable ../../bin/gw-dumper
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/general-writer && /usr/bin/cmake -E cmake_link_script CMakeFiles/gw-dumper.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/AlignTest.dir/link.d CMakeFiles/AlignTest.dir/AlignTest.cpp.o -o ../../../test-bin/AlignTest  ../../../lib/libncbi-ngs.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto -lmbedx509 -lmbedtls -lmbedcrypto
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make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 85%] Built target AlignTest
make  -f ngs/ngs-sdk/examples/CMakeFiles/PileupTest.dir/build.make ngs/ngs-sdk/examples/CMakeFiles/PileupTest.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/examples /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples/CMakeFiles/PileupTest.dir/DependInfo.cmake "--color="
[ 85%] Built target gw-dumper
make  -f ngs/ngs-sdk/examples/CMakeFiles/RefTest.dir/build.make ngs/ngs-sdk/examples/CMakeFiles/RefTest.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/examples /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples/CMakeFiles/RefTest.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 85%] Building C object tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/loader-imp.c.o
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f ngs/ngs-sdk/examples/CMakeFiles/PileupTest.dir/build.make ngs/ngs-sdk/examples/CMakeFiles/PileupTest.dir/build
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/fastq-loader\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/loaders/fastq-loader/CMakeFiles/latf-load.dir/loader-imp.c.o -MF CMakeFiles/latf-load.dir/loader-imp.c.o.d -o CMakeFiles/latf-load.dir/loader-imp.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader/loader-imp.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 85%] Building CXX object ngs/ngs-sdk/examples/CMakeFiles/RefTest.dir/RefTest.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT ngs/ngs-sdk/examples/CMakeFiles/RefTest.dir/RefTest.cpp.o -MF CMakeFiles/RefTest.dir/RefTest.cpp.o.d -o CMakeFiles/RefTest.dir/RefTest.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/examples/RefTest.cpp
[ 85%] Building CXX object ngs/ngs-sdk/examples/CMakeFiles/PileupTest.dir/PileupTest.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT ngs/ngs-sdk/examples/CMakeFiles/PileupTest.dir/PileupTest.cpp.o -MF CMakeFiles/PileupTest.dir/PileupTest.cpp.o.d -o CMakeFiles/PileupTest.dir/PileupTest.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/examples/PileupTest.cpp
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader/loader-imp.c: In function 'WriteLoaderSignature':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/fastq-loader/loader-imp.c:180:48: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  180 |         rc = KLoaderMeta_Write(node, progName, __DATE__, "FASTQ", KAppVersion());
      |                                                ^~~~~~~~
[ 85%] Linking CXX executable ../../../test-bin/Test_qa-stats_Hashing
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[ 85%] Linking CXX executable ../../../bin/latf-load
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/fastq-loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/latf-load.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_qa-stats_Hashing.dir/link.d "CMakeFiles/Test_qa-stats_Hashing.dir/test-hashing.cpp.o" -o ../../../test-bin/Test_qa-stats_Hashing  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/examples /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples/CMakeFiles/DumpReferenceFASTA.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 85%] Building CXX object ngs/ngs-sdk/examples/CMakeFiles/DumpReferenceFASTA.dir/DumpReferenceFASTA.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT ngs/ngs-sdk/examples/CMakeFiles/DumpReferenceFASTA.dir/DumpReferenceFASTA.cpp.o -MF CMakeFiles/DumpReferenceFASTA.dir/DumpReferenceFASTA.cpp.o.d -o CMakeFiles/DumpReferenceFASTA.dir/DumpReferenceFASTA.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/examples/DumpReferenceFASTA.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/latf-load.dir/link.d "CMakeFiles/latf-load.dir/spot-assembler.c.o" "CMakeFiles/latf-load.dir/common-writer.c.o" "CMakeFiles/latf-load.dir/sequence-writer.c.o" "CMakeFiles/latf-load.dir/common-reader.c.o" "CMakeFiles/latf-load.dir/fastq-reader.c.o" "CMakeFiles/latf-load.dir/zz_fastq-grammar.c.o" "CMakeFiles/latf-load.dir/zz_fastq-lex.c.o" "CMakeFiles/latf-load.dir/id2name.c.o" "CMakeFiles/latf-load.dir/fastq-loader.c.o" "CMakeFiles/latf-load.dir/loader-imp.c.o" -o ../../../bin/latf-load  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
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cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv latf-load latf-load.3.2.1
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 85%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs.dir/ngstest.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs.dir/ngstest.cpp.o -MF CMakeFiles/test-ngs.dir/ngstest.cpp.o.d -o CMakeFiles/test-ngs.dir/ngstest.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest.cpp
[ 85%] Linking CXX executable ../../../test-bin/RefTest
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/RefTest.dir/link.txt --verbose=1
[ 85%] Linking CXX executable ../../../test-bin/AlignSliceTest
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/AlignSliceTest.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/RefTest.dir/link.d CMakeFiles/RefTest.dir/RefTest.cpp.o -o ../../../test-bin/RefTest  ../../../lib/libncbi-ngs.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs_sra.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/test-tools/qa-stats && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_qa-stats_Input.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/AlignSliceTest.dir/link.d CMakeFiles/AlignSliceTest.dir/AlignSliceTest.cpp.o -o ../../../test-bin/AlignSliceTest  ../../../lib/libncbi-ngs.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto -lmbedx509 -lmbedtls -lmbedcrypto
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[ 85%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_sra.dir/ngstest_sra.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_sra.dir/ngstest_sra.cpp.o -MF CMakeFiles/test-ngs_sra.dir/ngstest_sra.cpp.o.d -o CMakeFiles/test-ngs_sra.dir/ngstest_sra.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest_sra.cpp
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make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 85%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb.dir/ngstest_sradb.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb.dir/ngstest_sradb.cpp.o -MF CMakeFiles/test-ngs_sradb.dir/ngstest_sradb.cpp.o.d -o CMakeFiles/test-ngs_sradb.dir/ngstest_sradb.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest_sradb.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_qa-stats_Input.dir/link.d "CMakeFiles/Test_qa-stats_Input.dir/test-input.cpp.o" "CMakeFiles/Test_qa-stats_Input.dir/__/__/__/tools/test-tools/qa-stats/input.cpp.o" -o ../../../test-bin/Test_qa-stats_Input  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 85%] Built target Test_qa-stats_Input
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1.dir/DependInfo.cmake "--color="
[ 86%] Linking CXX executable ../../../test-bin/PileupTest
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/PileupTest.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 86%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1.dir/ngstest_csra1.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1.dir/ngstest_csra1.cpp.o -MF CMakeFiles/test-ngs_csra1.dir/ngstest_csra1.cpp.o.d -o CMakeFiles/test-ngs_csra1.dir/ngstest_csra1.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest_csra1.cpp
[ 86%] Linking CXX executable ../../../test-bin/test-ngs
[ 86%] Linking CXX executable ../../../test-bin/DumpReferenceFASTA
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/ngs/ngs-sdk/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/DumpReferenceFASTA.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/PileupTest.dir/link.d CMakeFiles/PileupTest.dir/PileupTest.cpp.o -o ../../../test-bin/PileupTest  ../../../lib/libncbi-ngs.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 86%] Built target PileupTest
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_readcollection.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_readcollection.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_readcollection.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_readcollection.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_readcollection.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 86%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_readcollection.dir/ngstest_csra1_readcollection.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_readcollection.dir/ngstest_csra1_readcollection.cpp.o -MF CMakeFiles/test-ngs_csra1_readcollection.dir/ngstest_csra1_readcollection.cpp.o.d -o CMakeFiles/test-ngs_csra1_readcollection.dir/ngstest_csra1_readcollection.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest_csra1_readcollection.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs.dir/link.d "CMakeFiles/test-ngs.dir/ngstest.cpp.o" -o ../../../test-bin/test-ngs  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/DumpReferenceFASTA.dir/link.d CMakeFiles/DumpReferenceFASTA.dir/DumpReferenceFASTA.cpp.o -o ../../../test-bin/DumpReferenceFASTA  ../../../lib/libncbi-ngs.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 86%] Built target test-ngs
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_refwin.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_refwin.dir/depend
[ 86%] Built target DumpReferenceFASTA
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_refwin.dir/DependInfo.cmake "--color="
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_pileup.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_pileup.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_pileup.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_refwin.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_refwin.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_pileup.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_pileup.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 86%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_refwin.dir/ngstest_csra1_refwin.cpp.o
[ 86%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_pileup.dir/ngstest_csra1_pileup.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_refwin.dir/ngstest_csra1_refwin.cpp.o -MF CMakeFiles/test-ngs_csra1_refwin.dir/ngstest_csra1_refwin.cpp.o.d -o CMakeFiles/test-ngs_csra1_refwin.dir/ngstest_csra1_refwin.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_pileup.dir/ngstest_csra1_pileup.cpp.o -MF CMakeFiles/test-ngs_csra1_pileup.dir/ngstest_csra1_pileup.cpp.o.d -o CMakeFiles/test-ngs_csra1_pileup.dir/ngstest_csra1_pileup.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest_csra1_pileup.cpp
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp: In member function 'void CSRA1_NGS_ReferenceWindow_Slice_Filtered::Instance::test_method()':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp:591:196: note: '#pragma message: filtering did not work prior to today's changes. I have set filter bits to allow this test to pass. the test should be fixed so that filters are set to the two desired flags.'
  591 | #pragma message ( "filtering did not work prior to today's changes. I have set filter bits to allow this test to pass. the test should be fixed so that filters are set to the two desired flags." )
      |                                                                                                                                                                                                    ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp: In member function 'void CSRA1_NGS_ReferenceGetFilteredAlignmentSlice_Wraparound::Instance::test_method()':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp:669:196: note: '#pragma message: filtering did not work prior to today's changes. I have set filter bits to allow this test to pass. the test should be fixed so that filters are set to the two desired flags.'
  669 | #pragma message ( "filtering did not work prior to today's changes. I have set filter bits to allow this test to pass. the test should be fixed so that filters are set to the two desired flags." )
      |                                                                                                                                                                                                    ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp: In member function 'void CSRA1_NGS_ReferenceGetFilteredAlignmentSlice_Wraparound_StartInWindow::Instance::test_method()':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp:696:196: note: '#pragma message: filtering did not work prior to today's changes. I have set filter bits to allow this test to pass. the test should be fixed so that filters are set to the two desired flags.'
  696 | #pragma message ( "filtering did not work prior to today's changes. I have set filter bits to allow this test to pass. the test should be fixed so that filters are set to the two desired flags." )
      |                                                                                                                                                                                                    ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp: In member function 'void CSRA1_NGS_ReferenceGetFilteredAlignmentSlice_NoWraparound::Instance::test_method()':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp:719:196: note: '#pragma message: filtering did not work prior to today's changes. I have set filter bits to allow this test to pass. the test should be fixed so that filters are set to the two desired flags.'
  719 | #pragma message ( "filtering did not work prior to today's changes. I have set filter bits to allow this test to pass. the test should be fixed so that filters are set to the two desired flags." )
      |                                                                                                                                                                                                    ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp: In member function 'void CSRA1_NGS_ReferenceGetFilteredAlignmentSlice_NoWraparound_StartInWindow::Instance::test_method()':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest_csra1_refwin.cpp:740:196: note: '#pragma message: filtering did not work prior to today's changes. I have set filter bits to allow this test to pass. the test should be fixed so that filters are set to the two desired flags.'
  740 | #pragma message ( "filtering did not work prior to today's changes. I have set filter bits to allow this test to pass. the test should be fixed so that filters are set to the two desired flags." )
      |                                                                                                                                                                                                    ^
[ 86%] Building C object tools/external/vdb-config/CMakeFiles/vdb-config.dir/vdb-config.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-config\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/external/vdb-config/CMakeFiles/vdb-config.dir/vdb-config.c.o -MF CMakeFiles/vdb-config.dir/vdb-config.c.o.d -o CMakeFiles/vdb-config.dir/vdb-config.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/vdb-config.c
[ 86%] Building CXX object tools/external/vdb-config/CMakeFiles/vdb-config.dir/interactive2.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-config\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/vdb-config/CMakeFiles/vdb-config.dir/interactive2.cpp.o -MF CMakeFiles/vdb-config.dir/interactive2.cpp.o.d -o CMakeFiles/vdb-config.dir/interactive2.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/interactive2.cpp
In file included from /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/fmt.h:27,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sharq/fastq_parse.cpp:40:
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h: In instantiation of 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_value(T&&) [with Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; T = fmt::v9::basic_string_view<char>&]':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1777:29:   required from 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_arg(T&&) [with bool IS_PACKED = true; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; type <anonymous> = fmt::v9::detail::type::string_type; T = fmt::v9::basic_string_view<char>&; typename std::enable_if<IS_PACKED, int>::type <anonymous> = 0]'
 1777 |   return make_value<Context>(val);
      |          ~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1901:77:   required from 'constexpr fmt::v9::format_arg_store<Context, Args>::format_arg_store(T&& ...) [with T = {fmt::v9::basic_string_view<char>&, const char (&)[3]}; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; Args = {fmt::v9::basic_string_view<char>, char [3]}]'
 1899 |         data_{detail::make_arg<
      |               ~~~~~~~~~~~~~~~~~                                              
 1900 |             is_packed, Context,
      |             ~~~~~~~~~~~~~~~~~~~                                              
 1901 |             detail::mapped_type_constant<remove_cvref_t<T>, Context>::value>(
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
 1902 |             FMT_FORWARD(args))...} {
      |             ~~~~~~~~~~~~~~~~~~                                               
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1918:31:   required from 'OutputIt fmt::v9::format_to(OutputIt, format_string<T ...>, T&& ...) [with OutputIt = appender; T = {basic_string_view<char>&, const char (&)[3]}; typename std::enable_if<detail::is_output_iterator<OutputIt, char>::value, int>::type <anonymous> = 0; format_string<T ...> = basic_format_string<char, basic_string_view<char>&, const char (&)[3]>]'
 1918 |   return {FMT_FORWARD(args)...};
      |                               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/format-inl.h:65:14:   required from here
   65 |     format_to(it, FMT_STRING("{}{}"), message, SEP);
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:3235:52:   in 'constexpr' expansion of 'fmt::v9::make_format_args<>(args#0, args#1)'
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:15: warning: possibly dangling reference to a temporary [-Wdangling-reference]
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |               ^~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:46: note: the temporary was destroyed at the end of the full expression 'fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >().fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >::map<fmt::v9::basic_string_view<char> >((*(const fmt::v9::basic_string_view<char>*)(& val)))'
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h: In instantiation of 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_value(T&&) [with Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; T = std::__cxx11::basic_string<char>&]':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1777:29:   required from 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_arg(T&&) [with bool IS_PACKED = true; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; type <anonymous> = fmt::v9::detail::type::string_type; T = std::__cxx11::basic_string<char>&; typename std::enable_if<IS_PACKED, int>::type <anonymous> = 0]'
 1777 |   return make_value<Context>(val);
      |          ~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1901:77:   required from 'constexpr fmt::v9::format_arg_store<Context, Args>::format_arg_store(T&& ...) [with T = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, int&}; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, int}]'
 1899 |         data_{detail::make_arg<
      |               ~~~~~~~~~~~~~~~~~                                              
 1900 |             is_packed, Context,
      |             ~~~~~~~~~~~~~~~~~~~                                              
 1901 |             detail::mapped_type_constant<remove_cvref_t<T>, Context>::value>(
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
 1902 |             FMT_FORWARD(args))...} {
      |             ~~~~~~~~~~~~~~~~~~                                               
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1918:31:   required from 'std::string fmt::v9::format(format_string<T ...>, T&& ...) [with T = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, int&}; std::string = std::__cxx11::basic_string<char>; format_string<T ...> = basic_format_string<char, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, int&>]'
 1918 |   return {FMT_FORWARD(args)...};
      |                               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sharq/fastq_error.hpp:115:36:   required from here
  115 |             mMessage += fmt::format(" [{}:{}]", fname, line_number);
      |                         ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:3206:44:   in 'constexpr' expansion of 'fmt::v9::make_format_args<>(args#0, args#1)'
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:15: warning: possibly dangling reference to a temporary [-Wdangling-reference]
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |               ^~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:46: note: the temporary was destroyed at the end of the full expression 'fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >().fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >::map<std::__cxx11::basic_string<char> >((*(const std::__cxx11::basic_string<char>*)(& val)))'
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h: In instantiation of 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_value(T&&) [with Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; T = const std::__cxx11::basic_string<char>&]':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1777:29:   required from 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_arg(T&&) [with bool IS_PACKED = true; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; type <anonymous> = fmt::v9::detail::type::string_type; T = const std::__cxx11::basic_string<char>&; typename std::enable_if<IS_PACKED, int>::type <anonymous> = 0]'
 1777 |   return make_value<Context>(val);
      |          ~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1901:77:   required from 'constexpr fmt::v9::format_arg_store<Context, Args>::format_arg_store(T&& ...) [with T = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&}; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >}]'
 1899 |         data_{detail::make_arg<
      |               ~~~~~~~~~~~~~~~~~                                              
 1900 |             is_packed, Context,
      |             ~~~~~~~~~~~~~~~~~~~                                              
 1901 |             detail::mapped_type_constant<remove_cvref_t<T>, Context>::value>(
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
 1902 |             FMT_FORWARD(args))...} {
      |             ~~~~~~~~~~~~~~~~~~                                               
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1918:31:   required from 'std::string fmt::v9::format(format_string<T ...>, T&& ...) [with T = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&}; std::string = std::__cxx11::basic_string<char>; format_string<T ...> = basic_format_string<char, const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>]'
 1918 |   return {FMT_FORWARD(args)...};
      |                               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/sharq/fastq_error.hpp:131:30:   required from here
  131 |             os << fmt::format("{:<70}", std::get<1>(it.second));
      |                   ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:3206:44:   in 'constexpr' expansion of 'fmt::v9::make_format_args<>(args#0)'
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:15: warning: possibly dangling reference to a temporary [-Wdangling-reference]
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |               ^~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:46: note: the temporary was destroyed at the end of the full expression 'fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >().fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >::map<std::__cxx11::basic_string<char> >((* & val))'
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
[ 86%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/file-path.posix.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/file-path.posix.cpp.o -MF CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/file-path.posix.cpp.o.d -o CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/file-path.posix.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/file-path.posix.cpp
[ 86%] Building CXX object tools/external/vdb-config/CMakeFiles/vdb-config.dir/vdb-config-model.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/vdb-config\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/vdb-config/CMakeFiles/vdb-config.dir/vdb-config-model.cpp.o -MF CMakeFiles/vdb-config.dir/vdb-config-model.cpp.o.d -o CMakeFiles/vdb-config.dir/vdb-config-model.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/vdb-config/vdb-config-model.cpp
[ 86%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/json-parse.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/json-parse.cpp.o -MF CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/json-parse.cpp.o.d -o CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/json-parse.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/json-parse.cpp
[ 86%] Linking CXX executable ../../../bin/vdb-config
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-config.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-config.dir/link.d "CMakeFiles/vdb-config.dir/configure.cpp.o" "CMakeFiles/vdb-config.dir/util.cpp.o" "CMakeFiles/vdb-config.dir/vdb-config.c.o" "CMakeFiles/vdb-config.dir/interactive2.cpp.o" "CMakeFiles/vdb-config.dir/vdb-config-model.cpp.o" -o ../../../bin/vdb-config  ../../../ilib/libtui_cpp.a ../../../ilib/libtui.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f vdb-config.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv vdb-config vdb-config.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-config.3.2.1 vdb-config.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-config.3 vdb-config
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/vdb-config && /usr/bin/cmake -E copy /usr/include/ncbi-vdb/kfg/ncbi/default.kfg /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/ncbi/default.kfg
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 86%] Built target vdb-config
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_reference.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_reference.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs_reference.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_reference.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_reference.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 86%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_reference.dir/ngstest_reference.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_reference.dir/ngstest_reference.cpp.o -MF CMakeFiles/test-ngs_reference.dir/ngstest_reference.cpp.o.d -o CMakeFiles/test-ngs_reference.dir/ngstest_reference.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest_reference.cpp
[ 86%] Linking CXX executable ../../../test-bin/test-ngs_csra1_pileup
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_csra1_pileup.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_csra1_pileup.dir/link.d "CMakeFiles/test-ngs_csra1_pileup.dir/ngstest_csra1_pileup.cpp.o" -o ../../../test-bin/test-ngs_csra1_pileup  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 86%] Built target test-ngs_csra1_pileup
make  -f libs/ngs-vdb/test/CMakeFiles/test-fragmentblob.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-fragmentblob.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-fragmentblob.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-fragmentblob.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-fragmentblob.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 86%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-fragmentblob.dir/ngstest_fragmentblob.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-fragmentblob.dir/ngstest_fragmentblob.cpp.o -MF CMakeFiles/test-fragmentblob.dir/ngstest_fragmentblob.cpp.o.d -o CMakeFiles/test-fragmentblob.dir/ngstest_fragmentblob.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest_fragmentblob.cpp
[ 86%] Linking CXX executable ../../../test-bin/test-ngs_csra1_refwin
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_csra1_refwin.dir/link.txt --verbose=1
[ 86%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/build-version.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/build-version.cpp.o -MF CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/build-version.cpp.o.d -o CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/build-version.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/build-version.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_csra1_refwin.dir/link.d "CMakeFiles/test-ngs_csra1_refwin.dir/ngstest_csra1_refwin.cpp.o" -o ../../../test-bin/test-ngs_csra1_refwin  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 86%] Built target test-ngs_csra1_refwin
make  -f libs/ngs-vdb/test/CMakeFiles/test-referenceblob.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-referenceblob.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-referenceblob.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-referenceblob.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-referenceblob.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 87%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-referenceblob.dir/ngstest_referenceblob.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-referenceblob.dir/ngstest_referenceblob.cpp.o -MF CMakeFiles/test-referenceblob.dir/ngstest_referenceblob.cpp.o.d -o CMakeFiles/test-referenceblob.dir/ngstest_referenceblob.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest_referenceblob.cpp
[ 87%] Linking C static library ../../ilib/libvdb-sqlite.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/vdb-sqlite && /usr/bin/cmake -P CMakeFiles/vdb-sqlite.dir/cmake_clean_target.cmake
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/vdb-sqlite && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-sqlite.dir/link.txt --verbose=1
/usr/bin/ar qc ../../ilib/libvdb-sqlite.a "CMakeFiles/vdb-sqlite.dir/sqlite3.c.o" "CMakeFiles/vdb-sqlite.dir/sqlite3vdb.c.o"
/usr/bin/ranlib ../../ilib/libvdb-sqlite.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 87%] Built target vdb-sqlite
make  -f libs/ngs-vdb/test/CMakeFiles/test-byteblob.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-byteblob.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-byteblob.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-byteblob.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-byteblob.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 87%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-byteblob.dir/ngstest_byteblob.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-byteblob.dir/ngstest_byteblob.cpp.o -MF CMakeFiles/test-byteblob.dir/ngstest_byteblob.cpp.o.d -o CMakeFiles/test-byteblob.dir/ngstest_byteblob.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/ngstest_byteblob.cpp
[ 88%] Building CXX object test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/tool-args.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool/../../../tools/external/driver-tool -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/driver-tool/CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/tool-args.cpp.o -MF CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/tool-args.cpp.o.d -o CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/tool-args.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/driver-tool/tool-args.cpp
[ 88%] Linking CXX executable ../../../bin/bam-load
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/bam-loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/bam-load.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/bam-load.dir/link.d "CMakeFiles/bam-load.dir/bam-loader.c.o" "CMakeFiles/bam-load.dir/bam.c.o" "CMakeFiles/bam-load.dir/sam.c.o" "CMakeFiles/bam-load.dir/alignment-writer.c.o" "CMakeFiles/bam-load.dir/reference-writer.c.o" "CMakeFiles/bam-load.dir/sequence-writer.c.o" "CMakeFiles/bam-load.dir/loader-imp.c.o" "CMakeFiles/bam-load.dir/mem-bank.cpp.o" "CMakeFiles/bam-load.dir/low-match-count.cpp.o" -o ../../../bin/bam-load  ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto -lz
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f bam-load.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv bam-load bam-load.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s bam-load.3.2.1 bam-load.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s bam-load.3 bam-load
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 88%] Built target bam-load
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_sra_c++.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_sra_c++.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs_sra_c++.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_sra_c++.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_sra_c++.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 89%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_sra_c++.dir/SRAtest.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_sra_c++.dir/SRAtest.cpp.o -MF CMakeFiles/test-ngs_sra_c++.dir/SRAtest.cpp.o.d -o CMakeFiles/test-ngs_sra_c++.dir/SRAtest.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/SRAtest.cpp
[ 89%] Linking CXX executable ../../../test-bin/test-ngs_sradb
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_sradb.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_sradb.dir/link.d "CMakeFiles/test-ngs_sradb.dir/ngstest_sradb.cpp.o" -o ../../../test-bin/test-ngs_sradb  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 89%] Built target test-ngs_sradb
[ 90%] Linking CXX executable ../../../test-bin/test-ngs_csra1_readcollection
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_csra1_readcollection.dir/link.txt --verbose=1
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb_c++.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb_c++.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb_c++.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb_c++.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb_c++.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 90%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb_c++.dir/SRADBtest.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_sradb_c++.dir/SRADBtest.cpp.o -MF CMakeFiles/test-ngs_sradb_c++.dir/SRADBtest.cpp.o.d -o CMakeFiles/test-ngs_sradb_c++.dir/SRADBtest.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/SRADBtest.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_csra1_readcollection.dir/link.d "CMakeFiles/test-ngs_csra1_readcollection.dir/ngstest_csra1_readcollection.cpp.o" -o ../../../test-bin/test-ngs_csra1_readcollection  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 90%] Built target test-ngs_csra1_readcollection
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_c++.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_c++.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_c++.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_c++.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_c++.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 90%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_c++.dir/CSRA1test.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1_c++.dir/CSRA1test.cpp.o -MF CMakeFiles/test-ngs_csra1_c++.dir/CSRA1test.cpp.o.d -o CMakeFiles/test-ngs_csra1_c++.dir/CSRA1test.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/CSRA1test.cpp
[ 90%] Linking CXX executable ../../../test-bin/Test_Drivertool_RunSource
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/driver-tool && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Drivertool_RunSource.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Drivertool_RunSource.dir/link.d "CMakeFiles/Test_Drivertool_RunSource.dir/test-run-source.cpp.o" "CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/run-source.cpp.o" "CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/command-line.cpp.o" "CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/SDL-response.cpp.o" "CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/file-path.posix.cpp.o" "CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/json-parse.cpp.o" "CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/build-version.cpp.o" "CMakeFiles/Test_Drivertool_RunSource.dir/__/__/__/tools/external/driver-tool/tool-args.cpp.o" -o ../../../test-bin/Test_Drivertool_RunSource  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 90%] Built target Test_Drivertool_RunSource
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1pileup++.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1pileup++.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1pileup++.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1pileup++.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1pileup++.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 90%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1pileup++.dir/CSRA1PileupTest.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs_csra1pileup++.dir/CSRA1PileupTest.cpp.o -MF CMakeFiles/test-ngs_csra1pileup++.dir/CSRA1PileupTest.cpp.o.d -o CMakeFiles/test-ngs_csra1pileup++.dir/CSRA1PileupTest.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/CSRA1PileupTest.cpp
[ 90%] Linking CXX executable ../../../test-bin/test-byteblob
[ 90%] Linking CXX executable ../../../test-bin/test-fragmentblob
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-byteblob.dir/link.txt --verbose=1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fragmentblob.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-fragmentblob.dir/link.d "CMakeFiles/test-fragmentblob.dir/ngstest_fragmentblob.cpp.o" -o ../../../test-bin/test-fragmentblob  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 90%] Built target test-fragmentblob
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs-vdb.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs-vdb.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test/CMakeFiles/test-ngs-vdb.dir/DependInfo.cmake "--color="
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-byteblob.dir/link.d "CMakeFiles/test-byteblob.dir/ngstest_byteblob.cpp.o" -o ../../../test-bin/test-byteblob  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/ngs-vdb/test/CMakeFiles/test-ngs-vdb.dir/build.make libs/ngs-vdb/test/CMakeFiles/test-ngs-vdb.dir/build
[ 90%] Linking CXX executable ../../../test-bin/test-ngs_sra
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_sra.dir/link.txt --verbose=1
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 90%] Built target test-byteblob
make  -f libs/general-writer/test/CMakeFiles/Build-gw-dumper.dir/build.make libs/general-writer/test/CMakeFiles/Build-gw-dumper.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/general-writer/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/general-writer/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/general-writer/test/CMakeFiles/Build-gw-dumper.dir/DependInfo.cmake "--color="
[ 90%] Building CXX object libs/ngs-vdb/test/CMakeFiles/test-ngs-vdb.dir/test-ngs-vdb.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D_LIBRARY -D__arm64__ -D__fext__=\"cpp\" -D__file__=\"__FILE__\" -D__float128=_Float128 -D__mod__=\"NGS_TEST\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/usr/include/ncbi-vdb/../libs/ngs -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17 -fPIE   -rdynamic -MD -MT libs/ngs-vdb/test/CMakeFiles/test-ngs-vdb.dir/test-ngs-vdb.cpp.o -MF CMakeFiles/test-ngs-vdb.dir/test-ngs-vdb.cpp.o.d -o CMakeFiles/test-ngs-vdb.dir/test-ngs-vdb.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/test-ngs-vdb.cpp
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f libs/general-writer/test/CMakeFiles/Build-gw-dumper.dir/build.make libs/general-writer/test/CMakeFiles/Build-gw-dumper.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'libs/general-writer/test/CMakeFiles/Build-gw-dumper.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 90%] Built target Build-gw-dumper
make  -f tools/loaders/general-loader/test/CMakeFiles/test-general-loader.dir/build.make tools/loaders/general-loader/test/CMakeFiles/test-general-loader.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test/CMakeFiles/test-general-loader.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/loaders/general-loader/test/CMakeFiles/test-general-loader.dir/build.make tools/loaders/general-loader/test/CMakeFiles/test-general-loader.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 91%] Building CXX object tools/loaders/general-loader/test/CMakeFiles/test-general-loader.dir/test-general-loader.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/.. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/loaders/general-loader/test/CMakeFiles/test-general-loader.dir/test-general-loader.cpp.o -MF CMakeFiles/test-general-loader.dir/test-general-loader.cpp.o.d -o CMakeFiles/test-general-loader.dir/test-general-loader.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/test-general-loader.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_sra.dir/link.d "CMakeFiles/test-ngs_sra.dir/ngstest_sra.cpp.o" -o ../../../test-bin/test-ngs_sra  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 91%] Built target test-ngs_sra
make  -f tools/external/ngs-pileup/CMakeFiles/ngs-pileup.dir/build.make tools/external/ngs-pileup/CMakeFiles/ngs-pileup.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/ngs-pileup /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/ngs-pileup /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/ngs-pileup/CMakeFiles/ngs-pileup.dir/DependInfo.cmake "--color="
In file included from /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/test-general-loader.cpp:32:
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/../database-loader.cpp:833:90: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  833 |                         rc = KLoaderMeta_WriteWithVersion ( node, m_programName.c_str(), __DATE__, KAppVersion(), m_softwareName.c_str(), m_softwareVersion );
      |                                                                                          ^~~~~~~~
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/ngs-pileup/CMakeFiles/ngs-pileup.dir/build.make tools/external/ngs-pileup/CMakeFiles/ngs-pileup.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/test-general-loader.cpp:636:92: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
  636 |     REQUIRE_EQ ( string ( __DATE__), GetDbMetadataAttr ( m_db, "SOFTWARE/loader", "date" ) );
      |                                                                                            ^
[ 92%] Building CXX object tools/external/ngs-pileup/CMakeFiles/ngs-pileup.dir/ngs-pileup.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/ngs-pileup && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/ngs-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/ngs-pileup/CMakeFiles/ngs-pileup.dir/ngs-pileup.cpp.o -MF CMakeFiles/ngs-pileup.dir/ngs-pileup.cpp.o.d -o CMakeFiles/ngs-pileup.dir/ngs-pileup.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/ngs-pileup/ngs-pileup.cpp
[ 92%] Linking CXX executable ../../../test-bin/test-ngs_csra1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_csra1.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_csra1.dir/link.d "CMakeFiles/test-ngs_csra1.dir/ngstest_csra1.cpp.o" -o ../../../test-bin/test-ngs_csra1  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 92%] Built target test-ngs_csra1
make  -f tools/external/ref-variation/CMakeFiles/ref-variation.dir/build.make tools/external/ref-variation/CMakeFiles/ref-variation.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/ref-variation /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation/CMakeFiles/ref-variation.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/ref-variation/CMakeFiles/ref-variation.dir/build.make tools/external/ref-variation/CMakeFiles/ref-variation.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 92%] Building CXX object tools/external/ref-variation/CMakeFiles/ref-variation.dir/common.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/ref-variation\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/ref-variation/CMakeFiles/ref-variation.dir/common.cpp.o -MF CMakeFiles/ref-variation.dir/common.cpp.o.d -o CMakeFiles/ref-variation.dir/common.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/ref-variation/common.cpp
[ 93%] Building CXX object tools/external/ref-variation/CMakeFiles/ref-variation.dir/helper.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/ref-variation\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/ref-variation/CMakeFiles/ref-variation.dir/helper.cpp.o -MF CMakeFiles/ref-variation.dir/helper.cpp.o.d -o CMakeFiles/ref-variation.dir/helper.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/ref-variation/helper.cpp
[ 93%] Building CXX object tools/external/ngs-pileup/CMakeFiles/ngs-pileup.dir/main.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/ngs-pileup && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/ngs-pileup\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/ngs-pileup/CMakeFiles/ngs-pileup.dir/main.cpp.o -MF CMakeFiles/ngs-pileup.dir/main.cpp.o.d -o CMakeFiles/ngs-pileup.dir/main.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/ngs-pileup/main.cpp
[ 93%] Linking CXX executable ../../../test-bin/test-ngs_reference
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_reference.dir/link.txt --verbose=1
[ 93%] Building CXX object tools/external/ref-variation/CMakeFiles/ref-variation.dir/ref-variation.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/ref-variation\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/ref-variation/CMakeFiles/ref-variation.dir/ref-variation.cpp.o -MF CMakeFiles/ref-variation.dir/ref-variation.cpp.o.d -o CMakeFiles/ref-variation.dir/ref-variation.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/ref-variation/ref-variation.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_reference.dir/link.d "CMakeFiles/test-ngs_reference.dir/ngstest_reference.cpp.o" -o ../../../test-bin/test-ngs_reference  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 93%] Built target test-ngs_reference
make  -f tools/external/ref-variation/CMakeFiles/var-expand.dir/build.make tools/external/ref-variation/CMakeFiles/var-expand.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/ref-variation /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation/CMakeFiles/var-expand.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/ref-variation/CMakeFiles/var-expand.dir/build.make tools/external/ref-variation/CMakeFiles/var-expand.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 93%] Building CXX object tools/external/ref-variation/CMakeFiles/var-expand.dir/common.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/var-expand\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/ref-variation/CMakeFiles/var-expand.dir/common.cpp.o -MF CMakeFiles/var-expand.dir/common.cpp.o.d -o CMakeFiles/var-expand.dir/common.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/ref-variation/common.cpp
[ 93%] Linking CXX executable ../../../bin/ngs-pileup
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/ngs-pileup && /usr/bin/cmake -E cmake_link_script CMakeFiles/ngs-pileup.dir/link.txt --verbose=1
[ 93%] Building CXX object tools/external/ref-variation/CMakeFiles/var-expand.dir/helper.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/var-expand\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/ref-variation/CMakeFiles/var-expand.dir/helper.cpp.o -MF CMakeFiles/var-expand.dir/helper.cpp.o.d -o CMakeFiles/var-expand.dir/helper.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/ref-variation/helper.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/ngs-pileup.dir/link.d "CMakeFiles/ngs-pileup.dir/ngs-pileup.cpp.o" "CMakeFiles/ngs-pileup.dir/main.cpp.o" -o ../../../bin/ngs-pileup  ../../../lib/libncbi-ngs-c++.a ../../../lib/libngs-c++.a ../../../ilib/libngs.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f ngs-pileup.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv ngs-pileup ngs-pileup.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s ngs-pileup.3.2.1 ngs-pileup.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s ngs-pileup.3 ngs-pileup
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 93%] Built target ngs-pileup
make  -f tools/external/sra-search/CMakeFiles/sra-search.dir/build.make tools/external/sra-search/CMakeFiles/sra-search.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/CMakeFiles/sra-search.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/sra-search/CMakeFiles/sra-search.dir/build.make tools/external/sra-search/CMakeFiles/sra-search.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 93%] Building CXX object tools/external/sra-search/CMakeFiles/sra-search.dir/main.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-search/CMakeFiles/sra-search.dir/main.cpp.o -MF CMakeFiles/sra-search.dir/main.cpp.o.d -o CMakeFiles/sra-search.dir/main.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/main.cpp
[ 93%] Linking CXX executable ../../../test-bin/test-referenceblob
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-referenceblob.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-referenceblob.dir/link.d "CMakeFiles/test-referenceblob.dir/ngstest_referenceblob.cpp.o" -o ../../../test-bin/test-referenceblob  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 93%] Built target test-referenceblob
make  -f tools/external/sra-search/test/CMakeFiles/Test_SraSearch.dir/build.make tools/external/sra-search/test/CMakeFiles/Test_SraSearch.dir/depend
[ 93%] Building CXX object tools/external/ref-variation/CMakeFiles/var-expand.dir/var-expand.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/var-expand\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/ref-variation/CMakeFiles/var-expand.dir/var-expand.cpp.o -MF CMakeFiles/var-expand.dir/var-expand.cpp.o.d -o CMakeFiles/var-expand.dir/var-expand.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/ref-variation/var-expand.cpp
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test/CMakeFiles/Test_SraSearch.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/sra-search/test/CMakeFiles/Test_SraSearch.dir/build.make tools/external/sra-search/test/CMakeFiles/Test_SraSearch.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 93%] Building CXX object tools/external/sra-search/test/CMakeFiles/Test_SraSearch.dir/test-sra-search.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/Test_SraSearch.dir/test-sra-search.cpp.o -MF CMakeFiles/Test_SraSearch.dir/test-sra-search.cpp.o.d -o CMakeFiles/Test_SraSearch.dir/test-sra-search.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test/test-sra-search.cpp
[ 93%] Linking CXX executable ../../../test-bin/test-ngs_sra_c++
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_sra_c++.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_sra_c++.dir/link.d "CMakeFiles/test-ngs_sra_c++.dir/SRAtest.cpp.o" -o ../../../test-bin/test-ngs_sra_c++  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 93%] Built target test-ngs_sra_c++
make  -f tools/external/sra-search/test/CMakeFiles/Test_SraSearchSlow.dir/build.make tools/external/sra-search/test/CMakeFiles/Test_SraSearchSlow.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test/CMakeFiles/Test_SraSearchSlow.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/sra-search/test/CMakeFiles/Test_SraSearchSlow.dir/build.make tools/external/sra-search/test/CMakeFiles/Test_SraSearchSlow.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 93%] Building CXX object tools/external/sra-search/test/CMakeFiles/Test_SraSearchSlow.dir/test-sra-search-slow.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/Test_SraSearchSlow.dir/test-sra-search-slow.cpp.o -MF CMakeFiles/Test_SraSearchSlow.dir/test-sra-search-slow.cpp.o.d -o CMakeFiles/Test_SraSearchSlow.dir/test-sra-search-slow.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test/test-sra-search-slow.cpp
[ 93%] Linking CXX executable ../../../test-bin/test-ngs_csra1pileup++
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_csra1pileup++.dir/link.txt --verbose=1
[ 93%] Linking CXX executable ../../../bin/var-expand
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation && /usr/bin/cmake -E cmake_link_script CMakeFiles/var-expand.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/var-expand.dir/link.d "CMakeFiles/var-expand.dir/common.cpp.o" "CMakeFiles/var-expand.dir/helper.cpp.o" "CMakeFiles/var-expand.dir/var-expand.cpp.o" -o ../../../bin/var-expand  ../../../ilib/libtk-version.a -lkapp ../../../ilib/libngs-vdb.a ../../../lib/libncbi-ngs.a ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a ../../../ilib/libksrch.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f var-expand.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv var-expand var-expand.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s var-expand.3.2.1 var-expand.3
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_csra1pileup++.dir/link.d "CMakeFiles/test-ngs_csra1pileup++.dir/CSRA1PileupTest.cpp.o" -o ../../../test-bin/test-ngs_csra1pileup++  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s var-expand.3 var-expand
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 93%] Built target test-ngs_csra1pileup++
make  -f tools/external/sra-search/test/CMakeFiles/Test_SraSearch_SearchBlock.dir/build.make tools/external/sra-search/test/CMakeFiles/Test_SraSearch_SearchBlock.dir/depend
[ 93%] Built target var-expand
make  -f tools/internal/compute-coverage/CMakeFiles/compute-coverage-ngs.dir/build.make tools/internal/compute-coverage/CMakeFiles/compute-coverage-ngs.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test/CMakeFiles/Test_SraSearch_SearchBlock.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/compute-coverage /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/compute-coverage /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/compute-coverage/CMakeFiles/compute-coverage-ngs.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/sra-search/test/CMakeFiles/Test_SraSearch_SearchBlock.dir/build.make tools/external/sra-search/test/CMakeFiles/Test_SraSearch_SearchBlock.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/compute-coverage/CMakeFiles/compute-coverage-ngs.dir/build.make tools/internal/compute-coverage/CMakeFiles/compute-coverage-ngs.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 93%] Building CXX object tools/external/sra-search/test/CMakeFiles/Test_SraSearch_SearchBlock.dir/test-searchblock.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/Test_SraSearch_SearchBlock.dir/test-searchblock.cpp.o -MF CMakeFiles/Test_SraSearch_SearchBlock.dir/test-searchblock.cpp.o.d -o CMakeFiles/Test_SraSearch_SearchBlock.dir/test-searchblock.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test/test-searchblock.cpp
[ 93%] Building CXX object tools/internal/compute-coverage/CMakeFiles/compute-coverage-ngs.dir/compute-coverage-ngs.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/compute-coverage && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/internal/compute-coverage/CMakeFiles/compute-coverage-ngs.dir/compute-coverage-ngs.cpp.o -MF CMakeFiles/compute-coverage-ngs.dir/compute-coverage-ngs.cpp.o.d -o CMakeFiles/compute-coverage-ngs.dir/compute-coverage-ngs.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/compute-coverage/compute-coverage-ngs.cpp
[ 94%] Building CXX object tools/external/sra-search/CMakeFiles/sra-search.dir/searchblock.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-search/CMakeFiles/sra-search.dir/searchblock.cpp.o -MF CMakeFiles/sra-search.dir/searchblock.cpp.o.d -o CMakeFiles/sra-search.dir/searchblock.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/searchblock.cpp
[ 94%] Linking CXX executable ../../../bin/ref-variation
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/ref-variation && /usr/bin/cmake -E cmake_link_script CMakeFiles/ref-variation.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/ref-variation.dir/link.d "CMakeFiles/ref-variation.dir/common.cpp.o" "CMakeFiles/ref-variation.dir/helper.cpp.o" "CMakeFiles/ref-variation.dir/ref-variation.cpp.o" -o ../../../bin/ref-variation  ../../../ilib/libtk-version.a -lkapp ../../../ilib/libngs-vdb.a ../../../lib/libncbi-ngs.a ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a ../../../ilib/libksrch.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f ref-variation.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv ref-variation ref-variation.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s ref-variation.3.2.1 ref-variation.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s ref-variation.3 ref-variation
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 94%] Built target ref-variation
make  -f tools/internal/dump_ref_fasta/CMakeFiles/dump-ref-fasta.dir/build.make tools/internal/dump_ref_fasta/CMakeFiles/dump-ref-fasta.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/dump_ref_fasta /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/dump_ref_fasta /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/dump_ref_fasta/CMakeFiles/dump-ref-fasta.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/dump_ref_fasta/CMakeFiles/dump-ref-fasta.dir/build.make tools/internal/dump_ref_fasta/CMakeFiles/dump-ref-fasta.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 94%] Building CXX object tools/internal/dump_ref_fasta/CMakeFiles/dump-ref-fasta.dir/DumpReferenceFASTA.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/dump_ref_fasta && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/internal/dump_ref_fasta/CMakeFiles/dump-ref-fasta.dir/DumpReferenceFASTA.cpp.o -MF CMakeFiles/dump-ref-fasta.dir/DumpReferenceFASTA.cpp.o.d -o CMakeFiles/dump-ref-fasta.dir/DumpReferenceFASTA.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/dump_ref_fasta/DumpReferenceFASTA.cpp
[ 94%] Building CXX object tools/external/sra-search/CMakeFiles/sra-search.dir/fragmentmatchiterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-search/CMakeFiles/sra-search.dir/fragmentmatchiterator.cpp.o -MF CMakeFiles/sra-search.dir/fragmentmatchiterator.cpp.o.d -o CMakeFiles/sra-search.dir/fragmentmatchiterator.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/fragmentmatchiterator.cpp
[ 95%] Linking CXX executable ../../../bin/compute-coverage-ngs
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/compute-coverage && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute-coverage-ngs.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/compute-coverage-ngs.dir/link.d "CMakeFiles/compute-coverage-ngs.dir/compute-coverage-ngs.cpp.o" -o ../../../bin/compute-coverage-ngs  ../../../lib/libncbi-ngs.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f compute-coverage-ngs.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv compute-coverage-ngs compute-coverage-ngs.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s compute-coverage-ngs.3.2.1 compute-coverage-ngs.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s compute-coverage-ngs.3 compute-coverage-ngs
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 95%] Built target compute-coverage-ngs
make  -f tools/internal/vdb-sql/CMakeFiles/vdb-sql.dir/build.make tools/internal/vdb-sql/CMakeFiles/vdb-sql.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-sql /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-sql /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-sql/CMakeFiles/vdb-sql.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/vdb-sql/CMakeFiles/vdb-sql.dir/build.make tools/internal/vdb-sql/CMakeFiles/vdb-sql.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 95%] Building C object tools/internal/vdb-sql/CMakeFiles/vdb-sql.dir/vdb_shell.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-sql && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/vdb-sql\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-sql/CMakeFiles/vdb-sql.dir/vdb_shell.c.o -MF CMakeFiles/vdb-sql.dir/vdb_shell.c.o.d -o CMakeFiles/vdb-sql.dir/vdb_shell.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-sql/vdb_shell.c
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/dump_ref_fasta/DumpReferenceFASTA.cpp: In static member function 'static void DumpReferenceFASTA::process(const ngs::Reference&, const Range&)':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/dump_ref_fasta/DumpReferenceFASTA.cpp:184:30: warning: catching polymorphic type 'class ngs::ErrorMsg' by value [-Wcatch-value=]
  184 |             catch ( ErrorMsg x )
      |                              ^
[ 95%] Building CXX object tools/external/sra-search/CMakeFiles/sra-search.dir/blobmatchiterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-search/CMakeFiles/sra-search.dir/blobmatchiterator.cpp.o -MF CMakeFiles/sra-search.dir/blobmatchiterator.cpp.o.d -o CMakeFiles/sra-search.dir/blobmatchiterator.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/blobmatchiterator.cpp
[ 96%] Building CXX object tools/external/sra-search/test/CMakeFiles/Test_SraSearch_SearchBlock.dir/__/searchblock.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/Test_SraSearch_SearchBlock.dir/__/searchblock.cpp.o -MF CMakeFiles/Test_SraSearch_SearchBlock.dir/__/searchblock.cpp.o.d -o CMakeFiles/Test_SraSearch_SearchBlock.dir/__/searchblock.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/searchblock.cpp
[ 96%] Linking CXX executable ../../../bin/dump-ref-fasta
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/dump_ref_fasta && /usr/bin/cmake -E cmake_link_script CMakeFiles/dump-ref-fasta.dir/link.txt --verbose=1
[ 96%] Linking CXX executable ../../../test-bin/test-ngs_sradb_c++
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_sradb_c++.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/dump-ref-fasta.dir/link.d "CMakeFiles/dump-ref-fasta.dir/DumpReferenceFASTA.cpp.o" -o ../../../bin/dump-ref-fasta  ../../../lib/libncbi-ngs.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f dump-ref-fasta.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv dump-ref-fasta dump-ref-fasta.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s dump-ref-fasta.3.2.1 dump-ref-fasta.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s dump-ref-fasta.3 dump-ref-fasta
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 96%] Built target dump-ref-fasta
make  -f tools/internal/vdb-sql/CMakeFiles/fastconv.dir/build.make tools/internal/vdb-sql/CMakeFiles/fastconv.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-sql /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-sql /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-sql/CMakeFiles/fastconv.dir/DependInfo.cmake "--color="
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_sradb_c++.dir/link.d "CMakeFiles/test-ngs_sradb_c++.dir/SRADBtest.cpp.o" -o ../../../test-bin/test-ngs_sradb_c++  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/internal/vdb-sql/CMakeFiles/fastconv.dir/build.make tools/internal/vdb-sql/CMakeFiles/fastconv.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 96%] Built target test-ngs_sradb_c++
make  -f tools/test-tools/pileup-stats/CMakeFiles/pileup-stats.dir/build.make tools/test-tools/pileup-stats/CMakeFiles/pileup-stats.dir/depend
[ 96%] Building C object tools/internal/vdb-sql/CMakeFiles/fastconv.dir/fastconv.c.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-sql && /usr/bin/cc -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/internal/vdb-sql\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function -std=c11   -rdynamic -MD -MT tools/internal/vdb-sql/CMakeFiles/fastconv.dir/fastconv.c.o -MF CMakeFiles/fastconv.dir/fastconv.c.o.d -o CMakeFiles/fastconv.dir/fastconv.c.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-sql/fastconv.c
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/pileup-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats/CMakeFiles/pileup-stats.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/test-tools/pileup-stats/CMakeFiles/pileup-stats.dir/build.make tools/test-tools/pileup-stats/CMakeFiles/pileup-stats.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 96%] Building CXX object tools/test-tools/pileup-stats/CMakeFiles/pileup-stats.dir/pileup-stats.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/test-tools/pileup-stats/CMakeFiles/pileup-stats.dir/pileup-stats.cpp.o -MF CMakeFiles/pileup-stats.dir/pileup-stats.cpp.o.d -o CMakeFiles/pileup-stats.dir/pileup-stats.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/pileup-stats/pileup-stats.cpp
[ 96%] Building CXX object tools/external/sra-search/CMakeFiles/sra-search.dir/referencematchiterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-search/CMakeFiles/sra-search.dir/referencematchiterator.cpp.o -MF CMakeFiles/sra-search.dir/referencematchiterator.cpp.o.d -o CMakeFiles/sra-search.dir/referencematchiterator.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/referencematchiterator.cpp
[ 96%] Linking CXX executable ../../../test-bin/test-ngs-vdb
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs-vdb.dir/link.txt --verbose=1
[ 96%] Linking CXX executable ../../../../test-bin/Test_SraSearch_SearchBlock
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_SraSearch_SearchBlock.dir/link.txt --verbose=1
[ 96%] Linking CXX executable ../../../bin/fastconv
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-sql && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastconv.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_SraSearch_SearchBlock.dir/link.d "CMakeFiles/Test_SraSearch_SearchBlock.dir/test-searchblock.cpp.o" CMakeFiles/Test_SraSearch_SearchBlock.dir/__/searchblock.cpp.o -o ../../../../test-bin/Test_SraSearch_SearchBlock  ../../../../ilib/libngs-vdb.a ../../../../lib/libncbi-ngs.a -Wl,-Bstatic -lktst -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto -lncbi-vdb ../../../../ilib/libksrch.a /usr/lib/aarch64-linux-gnu/libkapp.a -lncbi-vdb
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 96%] Built target Test_SraSearch_SearchBlock
make  -f test/external/ngs/testy-the-bear/CMakeFiles/testy-the-bear.dir/build.make test/external/ngs/testy-the-bear/CMakeFiles/testy-the-bear.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/ngs/testy-the-bear /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/ngs/testy-the-bear /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/ngs/testy-the-bear/CMakeFiles/testy-the-bear.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/ngs/testy-the-bear/CMakeFiles/testy-the-bear.dir/build.make test/external/ngs/testy-the-bear/CMakeFiles/testy-the-bear.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 97%] Building CXX object test/external/ngs/testy-the-bear/CMakeFiles/testy-the-bear.dir/testy-the-bear.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/ngs/testy-the-bear && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/ngs/testy-the-bear\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/ngs/testy-the-bear/CMakeFiles/testy-the-bear.dir/testy-the-bear.cpp.o -MF CMakeFiles/testy-the-bear.dir/testy-the-bear.cpp.o.d -o CMakeFiles/testy-the-bear.dir/testy-the-bear.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/ngs/testy-the-bear/testy-the-bear.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs-vdb.dir/link.d "CMakeFiles/test-ngs-vdb.dir/test-ngs-vdb.cpp.o" -o ../../../test-bin/test-ngs-vdb  ../../../ilib/libtk-version.a ../../../ilib/libngs-vdb.a -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 97%] Built target test-ngs-vdb
make  -f test/external/fasterq-dump/CMakeFiles/Build-fasterq-dump.dir/build.make test/external/fasterq-dump/CMakeFiles/Build-fasterq-dump.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/fasterq-dump /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/fasterq-dump /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/fasterq-dump/CMakeFiles/Build-fasterq-dump.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/fasterq-dump/CMakeFiles/Build-fasterq-dump.dir/build.make test/external/fasterq-dump/CMakeFiles/Build-fasterq-dump.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/fasterq-dump/CMakeFiles/Build-fasterq-dump.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 97%] Built target Build-fasterq-dump
make  -f test/external/ngs-pileup/CMakeFiles/Test_Ngs_Pileup.dir/build.make test/external/ngs-pileup/CMakeFiles/Test_Ngs_Pileup.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/ngs-pileup /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/ngs-pileup /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/ngs-pileup/CMakeFiles/Test_Ngs_Pileup.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/ngs-pileup/CMakeFiles/Test_Ngs_Pileup.dir/build.make test/external/ngs-pileup/CMakeFiles/Test_Ngs_Pileup.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 97%] Building CXX object test/external/ngs-pileup/CMakeFiles/Test_Ngs_Pileup.dir/test-ngs-pileup.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/ngs-pileup && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/external/ngs-pileup/CMakeFiles/Test_Ngs_Pileup.dir/test-ngs-pileup.cpp.o -MF CMakeFiles/Test_Ngs_Pileup.dir/test-ngs-pileup.cpp.o.d -o CMakeFiles/Test_Ngs_Pileup.dir/test-ngs-pileup.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/ngs-pileup/test-ngs-pileup.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/fastconv.dir/link.d CMakeFiles/fastconv.dir/fastconv.c.o -o ../../../bin/fastconv  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a ../../../ilib/libvdb-sqlite.a ../../../ilib/libngs.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f fastconv.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv fastconv fastconv.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s fastconv.3.2.1 fastconv.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s fastconv.3 fastconv
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 97%] Built target fastconv
make  -f test/external/ngs-pileup/CMakeFiles/Build-ngs-pileup.dir/build.make test/external/ngs-pileup/CMakeFiles/Build-ngs-pileup.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/ngs-pileup /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/ngs-pileup /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/ngs-pileup/CMakeFiles/Build-ngs-pileup.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/ngs-pileup/CMakeFiles/Build-ngs-pileup.dir/build.make test/external/ngs-pileup/CMakeFiles/Build-ngs-pileup.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/ngs-pileup/CMakeFiles/Build-ngs-pileup.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 97%] Built target Build-ngs-pileup
make  -f test/external/sam-dump/CMakeFiles/Build-sam-dump.dir/build.make test/external/sam-dump/CMakeFiles/Build-sam-dump.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sam-dump /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/sam-dump /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/sam-dump/CMakeFiles/Build-sam-dump.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/sam-dump/CMakeFiles/Build-sam-dump.dir/build.make test/external/sam-dump/CMakeFiles/Build-sam-dump.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/sam-dump/CMakeFiles/Build-sam-dump.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 97%] Built target Build-sam-dump
make  -f test/external/vdb-config/CMakeFiles/Build-vdb-config.dir/build.make test/external/vdb-config/CMakeFiles/Build-vdb-config.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/vdb-config /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-config /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/vdb-config/CMakeFiles/Build-vdb-config.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/external/vdb-config/CMakeFiles/Build-vdb-config.dir/build.make test/external/vdb-config/CMakeFiles/Build-vdb-config.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/external/vdb-config/CMakeFiles/Build-vdb-config.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 97%] Built target Build-vdb-config
make  -f test/loaders/bam-load/CMakeFiles/Build-bam-load.dir/build.make test/loaders/bam-load/CMakeFiles/Build-bam-load.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/bam-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/bam-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/bam-load/CMakeFiles/Build-bam-load.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/bam-load/CMakeFiles/Build-bam-load.dir/build.make test/loaders/bam-load/CMakeFiles/Build-bam-load.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/loaders/bam-load/CMakeFiles/Build-bam-load.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 97%] Built target Build-bam-load
make  -f test/loaders/fastq-loader/CMakeFiles/Build-latf-load.dir/build.make test/loaders/fastq-loader/CMakeFiles/Build-latf-load.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader/CMakeFiles/Build-latf-load.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/fastq-loader/CMakeFiles/Build-latf-load.dir/build.make test/loaders/fastq-loader/CMakeFiles/Build-latf-load.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/loaders/fastq-loader/CMakeFiles/Build-latf-load.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 97%] Built target Build-latf-load
make  -f test/loaders/fastq-loader/CMakeFiles/SlowTest_FastqLoader_id2name.dir/build.make test/loaders/fastq-loader/CMakeFiles/SlowTest_FastqLoader_id2name.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader/CMakeFiles/SlowTest_FastqLoader_id2name.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/fastq-loader/CMakeFiles/SlowTest_FastqLoader_id2name.dir/build.make test/loaders/fastq-loader/CMakeFiles/SlowTest_FastqLoader_id2name.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 97%] Building CXX object test/loaders/fastq-loader/CMakeFiles/SlowTest_FastqLoader_id2name.dir/test-id2name.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/loaders/fastq-loader/CMakeFiles/SlowTest_FastqLoader_id2name.dir/test-id2name.cpp.o -MF CMakeFiles/SlowTest_FastqLoader_id2name.dir/test-id2name.cpp.o.d -o CMakeFiles/SlowTest_FastqLoader_id2name.dir/test-id2name.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/test-id2name.cpp
[ 97%] Linking CXX executable ../../../../test-bin/testy-the-bear
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/ngs/testy-the-bear && /usr/bin/cmake -E cmake_link_script CMakeFiles/testy-the-bear.dir/link.txt --verbose=1
[ 97%] Linking CXX executable ../../../bin/pileup-stats
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pileup-stats.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testy-the-bear.dir/link.d "CMakeFiles/testy-the-bear.dir/testy-the-bear.cpp.o" -o ../../../../test-bin/testy-the-bear  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a ../../../../lib/libncbi-ngs-c++.a ../../../../lib/libncbi-ngs.a ../../../../ilib/libngs.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 97%] Built target testy-the-bear
make  -f test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/build.make test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/build.make test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 97%] Building CXX object test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/wb-test-fastq.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/wb-test-fastq.cpp.o -MF CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/wb-test-fastq.cpp.o.d -o CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/wb-test-fastq.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/wb-test-fastq.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/pileup-stats.dir/link.d "CMakeFiles/pileup-stats.dir/pileup-stats.cpp.o" -o ../../../bin/pileup-stats  ../../../ilib/libgeneral-writer.a ../../../lib/libncbi-ngs.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f pileup-stats.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv pileup-stats pileup-stats.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s pileup-stats.3.2.1 pileup-stats.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s pileup-stats.3 pileup-stats
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 97%] Built target pileup-stats
make  -f test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqParse.dir/build.make test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqParse.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqParse.dir/DependInfo.cmake "--color="
[ 97%] Building CXX object tools/external/sra-search/CMakeFiles/sra-search.dir/vdb-search.cpp.o
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqParse.dir/build.make test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqParse.dir/build
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"tools/sra-search\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-search/CMakeFiles/sra-search.dir/vdb-search.cpp.o -MF CMakeFiles/sra-search.dir/vdb-search.cpp.o.d -o CMakeFiles/sra-search.dir/vdb-search.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/vdb-search.cpp
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 97%] Building CXX object test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqParse.dir/wb-test-fastq-parse.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqParse.dir/wb-test-fastq-parse.cpp.o -MF CMakeFiles/Test_FastqLoader_WbFastqParse.dir/wb-test-fastq-parse.cpp.o.d -o CMakeFiles/Test_FastqLoader_WbFastqParse.dir/wb-test-fastq-parse.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/wb-test-fastq-parse.cpp
[ 97%] Building CXX object tools/external/sra-search/test/CMakeFiles/Test_SraSearchSlow.dir/__/vdb-search.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/Test_SraSearchSlow.dir/__/vdb-search.cpp.o -MF CMakeFiles/Test_SraSearchSlow.dir/__/vdb-search.cpp.o.d -o CMakeFiles/Test_SraSearchSlow.dir/__/vdb-search.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/vdb-search.cpp
[ 97%] Building CXX object tools/external/sra-search/test/CMakeFiles/Test_SraSearch.dir/__/vdb-search.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/Test_SraSearch.dir/__/vdb-search.cpp.o -MF CMakeFiles/Test_SraSearch.dir/__/vdb-search.cpp.o.d -o CMakeFiles/Test_SraSearch.dir/__/vdb-search.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/vdb-search.cpp
[ 98%] Linking CXX executable ../../../bin/vdb-sql
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/internal/vdb-sql && /usr/bin/cmake -E cmake_link_script CMakeFiles/vdb-sql.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/vdb-sql.dir/link.d "CMakeFiles/vdb-sql.dir/vdb_shell.c.o" -o ../../../bin/vdb-sql  ../../../ilib/libvdb-sqlite.a ../../../ilib/libngs.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f vdb-sql.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv vdb-sql vdb-sql.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-sql.3.2.1 vdb-sql.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s vdb-sql.3 vdb-sql
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 98%] Built target vdb-sql
make  -f test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/build.make test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/build.make test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 98%] Building CXX object test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/test-fastq-loader.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/loaders/fastq-loader/CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/test-fastq-loader.cpp.o -MF CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/test-fastq-loader.cpp.o.d -o CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/test-fastq-loader.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/test-fastq-loader.cpp
[ 98%] Linking CXX executable ../../../bin/sra-search
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search && /usr/bin/cmake -E cmake_link_script CMakeFiles/sra-search.dir/link.txt --verbose=1
[ 98%] Building CXX object tools/external/sra-search/test/CMakeFiles/Test_SraSearch.dir/__/searchblock.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/Test_SraSearch.dir/__/searchblock.cpp.o -MF CMakeFiles/Test_SraSearch.dir/__/searchblock.cpp.o.d -o CMakeFiles/Test_SraSearch.dir/__/searchblock.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/searchblock.cpp
[ 98%] Building CXX object tools/external/sra-search/test/CMakeFiles/Test_SraSearchSlow.dir/__/searchblock.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/Test_SraSearchSlow.dir/__/searchblock.cpp.o -MF CMakeFiles/Test_SraSearchSlow.dir/__/searchblock.cpp.o.d -o CMakeFiles/Test_SraSearchSlow.dir/__/searchblock.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/searchblock.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sra-search.dir/link.d "CMakeFiles/sra-search.dir/main.cpp.o" "CMakeFiles/sra-search.dir/searchblock.cpp.o" "CMakeFiles/sra-search.dir/fragmentmatchiterator.cpp.o" "CMakeFiles/sra-search.dir/blobmatchiterator.cpp.o" "CMakeFiles/sra-search.dir/referencematchiterator.cpp.o" "CMakeFiles/sra-search.dir/vdb-search.cpp.o" -o ../../../bin/sra-search  ../../../ilib/libngs-vdb.a ../../../lib/libncbi-ngs.a ../../../ilib/libtk-version.a -Wl,-Bstatic -lkapp -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a ../../../ilib/libksrch.a
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f sra-search.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv sra-search sra-search.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-search.3.2.1 sra-search.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sra-search.3 sra-search
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 98%] Built target sra-search
make  -f test/loaders/sra-sort/CMakeFiles/Build-sra-sort.dir/build.make test/loaders/sra-sort/CMakeFiles/Build-sra-sort.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sra-sort /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/sra-sort /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/sra-sort/CMakeFiles/Build-sra-sort.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/sra-sort/CMakeFiles/Build-sra-sort.dir/build.make test/loaders/sra-sort/CMakeFiles/Build-sra-sort.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'test/loaders/sra-sort/CMakeFiles/Build-sra-sort.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 98%] Built target Build-sra-sort
make  -f test/internal/align/CMakeFiles/SlowTest_Align_estimator.dir/build.make test/internal/align/CMakeFiles/SlowTest_Align_estimator.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/align /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/align /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/align/CMakeFiles/SlowTest_Align_estimator.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/internal/align/CMakeFiles/SlowTest_Align_estimator.dir/build.make test/internal/align/CMakeFiles/SlowTest_Align_estimator.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 98%] Building CXX object test/internal/align/CMakeFiles/SlowTest_Align_estimator.dir/pileup_estimator.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/align && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -D__mod__=\"test/internal/align\" -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/usr/include/ncbi-vdb/ext -I/build/reproducible-path/sra-sdk-3.2.1+dfsg -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/../ncbi-vdb/interfaces/ext -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ncbi/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/internal/align/CMakeFiles/SlowTest_Align_estimator.dir/pileup_estimator.cpp.o -MF CMakeFiles/SlowTest_Align_estimator.dir/pileup_estimator.cpp.o.d -o CMakeFiles/SlowTest_Align_estimator.dir/pileup_estimator.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/align/pileup_estimator.cpp
[ 98%] Building CXX object tools/external/sra-search/test/CMakeFiles/Test_SraSearchSlow.dir/__/blobmatchiterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/Test_SraSearchSlow.dir/__/blobmatchiterator.cpp.o -MF CMakeFiles/Test_SraSearchSlow.dir/__/blobmatchiterator.cpp.o.d -o CMakeFiles/Test_SraSearchSlow.dir/__/blobmatchiterator.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/blobmatchiterator.cpp
[ 98%] Linking CXX executable ../../../test-bin/SlowTest_FastqLoader_id2name
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/SlowTest_FastqLoader_id2name.dir/link.txt --verbose=1
[ 98%] Building CXX object tools/external/sra-search/test/CMakeFiles/Test_SraSearch.dir/__/blobmatchiterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/Test_SraSearch.dir/__/blobmatchiterator.cpp.o -MF CMakeFiles/Test_SraSearch.dir/__/blobmatchiterator.cpp.o.d -o CMakeFiles/Test_SraSearch.dir/__/blobmatchiterator.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/blobmatchiterator.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/SlowTest_FastqLoader_id2name.dir/link.d "CMakeFiles/SlowTest_FastqLoader_id2name.dir/test-id2name.cpp.o" -o ../../../test-bin/SlowTest_FastqLoader_id2name  ../../../ilib/libfastqloader.a ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 98%] Built target SlowTest_FastqLoader_id2name
make  -f tools/external/sra-search/test/CMakeFiles/Build-sra-search.dir/build.make tools/external/sra-search/test/CMakeFiles/Build-sra-search.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test/CMakeFiles/Build-sra-search.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f tools/external/sra-search/test/CMakeFiles/Build-sra-search.dir/build.make tools/external/sra-search/test/CMakeFiles/Build-sra-search.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'tools/external/sra-search/test/CMakeFiles/Build-sra-search.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 98%] Built target Build-sra-search
[ 98%] Building CXX object tools/external/sra-search/test/CMakeFiles/Test_SraSearch.dir/__/fragmentmatchiterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/Test_SraSearch.dir/__/fragmentmatchiterator.cpp.o -MF CMakeFiles/Test_SraSearch.dir/__/fragmentmatchiterator.cpp.o.d -o CMakeFiles/Test_SraSearch.dir/__/fragmentmatchiterator.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/fragmentmatchiterator.cpp
[ 98%] Linking CXX executable ../../../test-bin/Test_Ngs_Pileup
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/ngs-pileup && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_Ngs_Pileup.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_Ngs_Pileup.dir/link.d "CMakeFiles/Test_Ngs_Pileup.dir/test-ngs-pileup.cpp.o" -o ../../../test-bin/Test_Ngs_Pileup  ../../../lib/libncbi-ngs-c++.a ../../../lib/libngs-c++.a ../../../ilib/libngs.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 98%] Built target Test_Ngs_Pileup
[ 98%] Building CXX object tools/external/sra-search/test/CMakeFiles/Test_SraSearch.dir/__/referencematchiterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/Test_SraSearch.dir/__/referencematchiterator.cpp.o -MF CMakeFiles/Test_SraSearch.dir/__/referencematchiterator.cpp.o.d -o CMakeFiles/Test_SraSearch.dir/__/referencematchiterator.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/referencematchiterator.cpp
[ 98%] Building CXX object tools/external/sra-search/test/CMakeFiles/Test_SraSearchSlow.dir/__/fragmentmatchiterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/Test_SraSearchSlow.dir/__/fragmentmatchiterator.cpp.o -MF CMakeFiles/Test_SraSearchSlow.dir/__/fragmentmatchiterator.cpp.o.d -o CMakeFiles/Test_SraSearchSlow.dir/__/fragmentmatchiterator.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/fragmentmatchiterator.cpp
[ 98%] Building CXX object tools/external/sra-search/test/CMakeFiles/Test_SraSearchSlow.dir/__/referencematchiterator.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test/.. -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/external/sra-search/test/CMakeFiles/Test_SraSearchSlow.dir/__/referencematchiterator.cpp.o -MF CMakeFiles/Test_SraSearchSlow.dir/__/referencematchiterator.cpp.o.d -o CMakeFiles/Test_SraSearchSlow.dir/__/referencematchiterator.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/referencematchiterator.cpp
[ 98%] Linking CXX executable ../../../test-bin/Test_FastqLoader_WbFastqParse
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_FastqLoader_WbFastqParse.dir/link.txt --verbose=1
[ 98%] Building CXX object tools/loaders/general-loader/test/CMakeFiles/test-general-loader.dir/testsource.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/.. -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT tools/loaders/general-loader/test/CMakeFiles/test-general-loader.dir/testsource.cpp.o -MF CMakeFiles/test-general-loader.dir/testsource.cpp.o.d -o CMakeFiles/test-general-loader.dir/testsource.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/testsource.cpp
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_FastqLoader_WbFastqParse.dir/link.d "CMakeFiles/Test_FastqLoader_WbFastqParse.dir/wb-test-fastq-parse.cpp.o" -o ../../../test-bin/Test_FastqLoader_WbFastqParse  ../../../ilib/libfastqloader.a ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 98%] Built target Test_FastqLoader_WbFastqParse
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/testsource.cpp: In constructor 'TestSource::Buffer::Buffer(const std::string&, uint32_t, uint32_t, bool)':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/testsource.cpp:47:13: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' specified bound 8 equals destination size [-Wstringop-truncation]
   47 |     strncpy ( m_header . dad . signature, p_signature . c_str(), sizeof m_header . dad . signature );
      |             ^
[ 98%] Linking CXX executable ../../../../test-bin/Test_SraSearchSlow
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_SraSearchSlow.dir/link.txt --verbose=1
[ 99%] Linking CXX executable ../../../../test-bin/Test_SraSearch
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_SraSearchSlow.dir/link.d "CMakeFiles/Test_SraSearchSlow.dir/test-sra-search-slow.cpp.o" "CMakeFiles/Test_SraSearchSlow.dir/__/vdb-search.cpp.o" CMakeFiles/Test_SraSearchSlow.dir/__/searchblock.cpp.o CMakeFiles/Test_SraSearchSlow.dir/__/blobmatchiterator.cpp.o CMakeFiles/Test_SraSearchSlow.dir/__/fragmentmatchiterator.cpp.o CMakeFiles/Test_SraSearchSlow.dir/__/referencematchiterator.cpp.o -o ../../../../test-bin/Test_SraSearchSlow  ../../../../ilib/libngs-vdb.a ../../../../lib/libncbi-ngs.a -Wl,-Bstatic -lktst -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../../ilib/libtk-version.a ../../../../ilib/libksrch.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_SraSearch.dir/link.txt --verbose=1
[ 99%] Built target Test_SraSearchSlow
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_SraSearch.dir/link.d "CMakeFiles/Test_SraSearch.dir/test-sra-search.cpp.o" "CMakeFiles/Test_SraSearch.dir/__/vdb-search.cpp.o" CMakeFiles/Test_SraSearch.dir/__/searchblock.cpp.o CMakeFiles/Test_SraSearch.dir/__/blobmatchiterator.cpp.o CMakeFiles/Test_SraSearch.dir/__/fragmentmatchiterator.cpp.o CMakeFiles/Test_SraSearch.dir/__/referencematchiterator.cpp.o -o ../../../../test-bin/Test_SraSearch  ../../../../ilib/libngs-vdb.a ../../../../lib/libncbi-ngs.a -Wl,-Bstatic -lktst -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../../ilib/libtk-version.a ../../../../ilib/libksrch.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 99%] Linking CXX executable ../../../test-bin/Test_FastqLoader_WbFastqLoader
[ 99%] Built target Test_SraSearch
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/link.d "CMakeFiles/Test_FastqLoader_WbFastqLoader.dir/test-fastq-loader.cpp.o" -o ../../../test-bin/Test_FastqLoader_WbFastqLoader  ../../../ilib/libfastqloader.a ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 99%] Built target Test_FastqLoader_WbFastqLoader
[ 99%] Linking CXX executable ../../../test-bin/SlowTest_Align_estimator
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/internal/align && /usr/bin/cmake -E cmake_link_script CMakeFiles/SlowTest_Align_estimator.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/SlowTest_Align_estimator.dir/link.d CMakeFiles/SlowTest_Align_estimator.dir/pileup_estimator.cpp.o -o ../../../test-bin/SlowTest_Align_estimator  ../../../lib/libncbi-ngs-c++.a ../../../lib/libngs-c++.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto ../../../ilib/libngs.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 99%] Built target SlowTest_Align_estimator
[ 99%] Linking CXX executable ../../../../test-bin/test-general-loader
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/general-loader/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-general-loader.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-general-loader.dir/link.d "CMakeFiles/test-general-loader.dir/test-general-loader.cpp.o" "CMakeFiles/test-general-loader.dir/testsource.cpp.o" -o ../../../../test-bin/test-general-loader  ../../../../ilib/libgeneral-writer.a -lkapp -lktst ../../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libncbi-wvdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 99%] Built target test-general-loader
[ 99%] Linking CXX executable ../../../test-bin/test-ngs_csra1_c++
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/libs/ngs-vdb/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-ngs_csra1_c++.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-ngs_csra1_c++.dir/link.d "CMakeFiles/test-ngs_csra1_c++.dir/CSRA1test.cpp.o" -o ../../../test-bin/test-ngs_csra1_c++  -Wl,-Bstatic -lktst -lkapp ../../../lib/libncbi-ngs.a -Wl,-Bdynamic /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 99%] Built target test-ngs_csra1_c++
[ 99%] Linking CXX executable ../../../test-bin/Test_FastqLoader_WbFastq_dflt
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/fastq-loader && /usr/bin/cmake -E cmake_link_script CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/link.d "CMakeFiles/Test_FastqLoader_WbFastq_dflt.dir/wb-test-fastq.cpp.o" -o ../../../test-bin/Test_FastqLoader_WbFastq_dflt  ../../../ilib/libfastqloader.a ../../../ilib/libloader.a /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 99%] Built target Test_FastqLoader_WbFastq_dflt
[ 99%] Linking CXX executable ../../../bin/sam-analyze
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/sam-analyze && /usr/bin/cmake -E cmake_link_script CMakeFiles/sam-analyze.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sam-analyze.dir/link.d "CMakeFiles/sam-analyze.dir/main.cpp.o" "CMakeFiles/sam-analyze.dir/sqlite3.c.o" -o ../../../bin/sam-analyze  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 99%] Built target sam-analyze
[ 99%] Linking CXX executable ../../../bin/sharq
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/loaders/sharq && /usr/bin/cmake -E cmake_link_script CMakeFiles/sharq.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/sharq.dir/link.d CMakeFiles/sharq.dir/fastq_parse.cpp.o -o ../../../bin/sharq  -lstdc++fs /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lre2 -labsl_string_view /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && rm -f sharq.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && mv sharq sharq.3.2.1
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sharq.3.2.1 sharq.3
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin && ln -f -s sharq.3 sharq
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 99%] Built target sharq
make  -f test/loaders/sharq/CMakeFiles/test-sharq-reader.dir/build.make test/loaders/sharq/CMakeFiles/test-sharq-reader.dir/depend
make  -f test/loaders/sharq/CMakeFiles/test-sharq-parser.dir/build.make test/loaders/sharq/CMakeFiles/test-sharq-parser.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/sharq /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/sharq/CMakeFiles/test-sharq-reader.dir/DependInfo.cmake "--color="
make  -f test/loaders/sharq/CMakeFiles/test-sharq-writer.dir/build.make test/loaders/sharq/CMakeFiles/test-sharq-writer.dir/depend
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/sharq /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/sharq/CMakeFiles/test-sharq-parser.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/sra-sdk-3.2.1+dfsg /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/sharq /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/sharq/CMakeFiles/test-sharq-writer.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/sharq/CMakeFiles/test-sharq-reader.dir/build.make test/loaders/sharq/CMakeFiles/test-sharq-reader.dir/build
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/sharq/CMakeFiles/test-sharq-parser.dir/build.make test/loaders/sharq/CMakeFiles/test-sharq-parser.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make  -f test/loaders/sharq/CMakeFiles/test-sharq-writer.dir/build.make test/loaders/sharq/CMakeFiles/test-sharq-writer.dir/build
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[ 99%] Building CXX object test/loaders/sharq/CMakeFiles/test-sharq-reader.dir/test-sharq-reader.cpp.o
[ 99%] Building CXX object test/loaders/sharq/CMakeFiles/test-sharq-parser.dir/test-sharq-parser.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/sharq && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib/include -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/../../../tools/loaders/sharq -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/loaders/sharq/CMakeFiles/test-sharq-parser.dir/test-sharq-parser.cpp.o -MF CMakeFiles/test-sharq-parser.dir/test-sharq-parser.cpp.o.d -o CMakeFiles/test-sharq-parser.dir/test-sharq-parser.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/test-sharq-parser.cpp
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/sharq && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib/include -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/../../../tools/loaders/sharq -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/loaders/sharq/CMakeFiles/test-sharq-reader.dir/test-sharq-reader.cpp.o -MF CMakeFiles/test-sharq-reader.dir/test-sharq-reader.cpp.o.d -o CMakeFiles/test-sharq-reader.dir/test-sharq-reader.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/test-sharq-reader.cpp
[ 99%] Building CXX object test/loaders/sharq/CMakeFiles/test-sharq-writer.dir/test-sharq-writer.cpp.o
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/sharq && /usr/bin/c++ -DBMNEONOPT -DLINUX -DNDEBUG -DUNIX -D_ARCH_BITS=64 -D_GNU_SOURCE -D__arm64__ -D__float128=_Float128 -Darm64 -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/cc/gcc -I/usr/include/ncbi-vdb/cc/gcc/arm64 -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib/include -I/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/../../../tools/loaders/sharq -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -std=c++17   -rdynamic -MD -MT test/loaders/sharq/CMakeFiles/test-sharq-writer.dir/test-sharq-writer.cpp.o -MF CMakeFiles/test-sharq-writer.dir/test-sharq-writer.cpp.o.d -o CMakeFiles/test-sharq-writer.dir/test-sharq-writer.cpp.o -c /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/test-sharq-writer.cpp
In file included from /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/fmt.h:27,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/../../../tools/loaders/sharq/fastq_error.hpp:12,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/../../../tools/loaders/sharq/fastq_read.hpp:9,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/../../../tools/loaders/sharq/fastq_writer.hpp:42,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/test-sharq-writer.cpp:31:
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h: In instantiation of 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_value(T&&) [with Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; T = fmt::v9::basic_string_view<char>&]':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1777:29:   required from 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_arg(T&&) [with bool IS_PACKED = true; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; type <anonymous> = fmt::v9::detail::type::string_type; T = fmt::v9::basic_string_view<char>&; typename std::enable_if<IS_PACKED, int>::type <anonymous> = 0]'
 1777 |   return make_value<Context>(val);
      |          ~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1901:77:   required from 'constexpr fmt::v9::format_arg_store<Context, Args>::format_arg_store(T&& ...) [with T = {fmt::v9::basic_string_view<char>&, const char (&)[3]}; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; Args = {fmt::v9::basic_string_view<char>, char [3]}]'
 1899 |         data_{detail::make_arg<
      |               ~~~~~~~~~~~~~~~~~                                              
 1900 |             is_packed, Context,
      |             ~~~~~~~~~~~~~~~~~~~                                              
 1901 |             detail::mapped_type_constant<remove_cvref_t<T>, Context>::value>(
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
 1902 |             FMT_FORWARD(args))...} {
      |             ~~~~~~~~~~~~~~~~~~                                               
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1918:31:   required from 'OutputIt fmt::v9::format_to(OutputIt, format_string<T ...>, T&& ...) [with OutputIt = appender; T = {basic_string_view<char>&, const char (&)[3]}; typename std::enable_if<detail::is_output_iterator<OutputIt, char>::value, int>::type <anonymous> = 0; format_string<T ...> = basic_format_string<char, basic_string_view<char>&, const char (&)[3]>]'
 1918 |   return {FMT_FORWARD(args)...};
      |                               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/format-inl.h:65:14:   required from here
   65 |     format_to(it, FMT_STRING("{}{}"), message, SEP);
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:3235:52:   in 'constexpr' expansion of 'fmt::v9::make_format_args<>(args#0, args#1)'
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:15: warning: possibly dangling reference to a temporary [-Wdangling-reference]
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |               ^~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:46: note: the temporary was destroyed at the end of the full expression 'fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >().fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >::map<fmt::v9::basic_string_view<char> >((*(const fmt::v9::basic_string_view<char>*)(& val)))'
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h: In instantiation of 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_value(T&&) [with Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; T = std::__cxx11::basic_string<char>&]':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1777:29:   required from 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_arg(T&&) [with bool IS_PACKED = true; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; type <anonymous> = fmt::v9::detail::type::string_type; T = std::__cxx11::basic_string<char>&; typename std::enable_if<IS_PACKED, int>::type <anonymous> = 0]'
 1777 |   return make_value<Context>(val);
      |          ~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1901:77:   required from 'constexpr fmt::v9::format_arg_store<Context, Args>::format_arg_store(T&& ...) [with T = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, int&}; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, int}]'
 1899 |         data_{detail::make_arg<
      |               ~~~~~~~~~~~~~~~~~                                              
 1900 |             is_packed, Context,
      |             ~~~~~~~~~~~~~~~~~~~                                              
 1901 |             detail::mapped_type_constant<remove_cvref_t<T>, Context>::value>(
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
 1902 |             FMT_FORWARD(args))...} {
      |             ~~~~~~~~~~~~~~~~~~                                               
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1918:31:   required from 'std::string fmt::v9::format(format_string<T ...>, T&& ...) [with T = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, int&}; std::string = std::__cxx11::basic_string<char>; format_string<T ...> = basic_format_string<char, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, int&>]'
 1918 |   return {FMT_FORWARD(args)...};
      |                               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/../../../tools/loaders/sharq/fastq_error.hpp:115:36:   required from here
  115 |             mMessage += fmt::format(" [{}:{}]", fname, line_number);
      |                         ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:3206:44:   in 'constexpr' expansion of 'fmt::v9::make_format_args<>(args#0, args#1)'
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:15: warning: possibly dangling reference to a temporary [-Wdangling-reference]
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |               ^~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:46: note: the temporary was destroyed at the end of the full expression 'fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >().fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >::map<std::__cxx11::basic_string<char> >((*(const std::__cxx11::basic_string<char>*)(& val)))'
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h: In instantiation of 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_value(T&&) [with Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; T = const std::__cxx11::basic_string<char>&]':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1777:29:   required from 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_arg(T&&) [with bool IS_PACKED = true; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; type <anonymous> = fmt::v9::detail::type::string_type; T = const std::__cxx11::basic_string<char>&; typename std::enable_if<IS_PACKED, int>::type <anonymous> = 0]'
 1777 |   return make_value<Context>(val);
      |          ~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1901:77:   required from 'constexpr fmt::v9::format_arg_store<Context, Args>::format_arg_store(T&& ...) [with T = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&}; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >}]'
 1899 |         data_{detail::make_arg<
      |               ~~~~~~~~~~~~~~~~~                                              
 1900 |             is_packed, Context,
      |             ~~~~~~~~~~~~~~~~~~~                                              
 1901 |             detail::mapped_type_constant<remove_cvref_t<T>, Context>::value>(
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
 1902 |             FMT_FORWARD(args))...} {
      |             ~~~~~~~~~~~~~~~~~~                                               
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1918:31:   required from 'std::string fmt::v9::format(format_string<T ...>, T&& ...) [with T = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&}; std::string = std::__cxx11::basic_string<char>; format_string<T ...> = basic_format_string<char, const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>]'
 1918 |   return {FMT_FORWARD(args)...};
      |                               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/../../../tools/loaders/sharq/fastq_error.hpp:131:30:   required from here
  131 |             os << fmt::format("{:<70}", std::get<1>(it.second));
      |                   ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:3206:44:   in 'constexpr' expansion of 'fmt::v9::make_format_args<>(args#0)'
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:15: warning: possibly dangling reference to a temporary [-Wdangling-reference]
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |               ^~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:46: note: the temporary was destroyed at the end of the full expression 'fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >().fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >::map<std::__cxx11::basic_string<char> >((* & val))'
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/fmt.h:27,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/../../tools/loaders/sharq/fastq_error.hpp:12,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/../../tools/loaders/sharq/fastq_read.hpp:9,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/../../tools/loaders/sharq/fastq_parser.hpp:45,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/test-sharq-parser.cpp:32:
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h: In instantiation of 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_value(T&&) [with Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; T = fmt::v9::basic_string_view<char>&]':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1777:29:   required from 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_arg(T&&) [with bool IS_PACKED = true; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; type <anonymous> = fmt::v9::detail::type::string_type; T = fmt::v9::basic_string_view<char>&; typename std::enable_if<IS_PACKED, int>::type <anonymous> = 0]'
 1777 |   return make_value<Context>(val);
      |          ~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1901:77:   required from 'constexpr fmt::v9::format_arg_store<Context, Args>::format_arg_store(T&& ...) [with T = {fmt::v9::basic_string_view<char>&, const char (&)[3]}; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; Args = {fmt::v9::basic_string_view<char>, char [3]}]'
 1899 |         data_{detail::make_arg<
      |               ~~~~~~~~~~~~~~~~~                                              
 1900 |             is_packed, Context,
      |             ~~~~~~~~~~~~~~~~~~~                                              
 1901 |             detail::mapped_type_constant<remove_cvref_t<T>, Context>::value>(
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
 1902 |             FMT_FORWARD(args))...} {
      |             ~~~~~~~~~~~~~~~~~~                                               
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1918:31:   required from 'OutputIt fmt::v9::format_to(OutputIt, format_string<T ...>, T&& ...) [with OutputIt = appender; T = {basic_string_view<char>&, const char (&)[3]}; typename std::enable_if<detail::is_output_iterator<OutputIt, char>::value, int>::type <anonymous> = 0; format_string<T ...> = basic_format_string<char, basic_string_view<char>&, const char (&)[3]>]'
 1918 |   return {FMT_FORWARD(args)...};
      |                               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/format-inl.h:65:14:   required from here
   65 |     format_to(it, FMT_STRING("{}{}"), message, SEP);
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:3235:52:   in 'constexpr' expansion of 'fmt::v9::make_format_args<>(args#0, args#1)'
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:15: warning: possibly dangling reference to a temporary [-Wdangling-reference]
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |               ^~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:46: note: the temporary was destroyed at the end of the full expression 'fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >().fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >::map<fmt::v9::basic_string_view<char> >((*(const fmt::v9::basic_string_view<char>*)(& val)))'
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h: In instantiation of 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_value(T&&) [with Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; T = std::__cxx11::basic_string<char>&]':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1777:29:   required from 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_arg(T&&) [with bool IS_PACKED = true; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; type <anonymous> = fmt::v9::detail::type::string_type; T = std::__cxx11::basic_string<char>&; typename std::enable_if<IS_PACKED, int>::type <anonymous> = 0]'
 1777 |   return make_value<Context>(val);
      |          ~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1901:77:   required from 'constexpr fmt::v9::format_arg_store<Context, Args>::format_arg_store(T&& ...) [with T = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, int&}; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, int}]'
 1899 |         data_{detail::make_arg<
      |               ~~~~~~~~~~~~~~~~~                                              
 1900 |             is_packed, Context,
      |             ~~~~~~~~~~~~~~~~~~~                                              
 1901 |             detail::mapped_type_constant<remove_cvref_t<T>, Context>::value>(
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
 1902 |             FMT_FORWARD(args))...} {
      |             ~~~~~~~~~~~~~~~~~~                                               
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1918:31:   required from 'std::string fmt::v9::format(format_string<T ...>, T&& ...) [with T = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, int&}; std::string = std::__cxx11::basic_string<char>; format_string<T ...> = basic_format_string<char, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, int&>]'
 1918 |   return {FMT_FORWARD(args)...};
      |                               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/../../tools/loaders/sharq/fastq_error.hpp:115:36:   required from here
  115 |             mMessage += fmt::format(" [{}:{}]", fname, line_number);
      |                         ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:3206:44:   in 'constexpr' expansion of 'fmt::v9::make_format_args<>(args#0, args#1)'
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:15: warning: possibly dangling reference to a temporary [-Wdangling-reference]
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |               ^~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:46: note: the temporary was destroyed at the end of the full expression 'fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >().fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >::map<std::__cxx11::basic_string<char> >((*(const std::__cxx11::basic_string<char>*)(& val)))'
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h: In instantiation of 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_value(T&&) [with Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; T = const std::__cxx11::basic_string<char>&]':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1777:29:   required from 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_arg(T&&) [with bool IS_PACKED = true; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; type <anonymous> = fmt::v9::detail::type::string_type; T = const std::__cxx11::basic_string<char>&; typename std::enable_if<IS_PACKED, int>::type <anonymous> = 0]'
 1777 |   return make_value<Context>(val);
      |          ~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1901:77:   required from 'constexpr fmt::v9::format_arg_store<Context, Args>::format_arg_store(T&& ...) [with T = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&}; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >}]'
 1899 |         data_{detail::make_arg<
      |               ~~~~~~~~~~~~~~~~~                                              
 1900 |             is_packed, Context,
      |             ~~~~~~~~~~~~~~~~~~~                                              
 1901 |             detail::mapped_type_constant<remove_cvref_t<T>, Context>::value>(
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
 1902 |             FMT_FORWARD(args))...} {
      |             ~~~~~~~~~~~~~~~~~~                                               
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1918:31:   required from 'std::string fmt::v9::format(format_string<T ...>, T&& ...) [with T = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&}; std::string = std::__cxx11::basic_string<char>; format_string<T ...> = basic_format_string<char, const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>]'
 1918 |   return {FMT_FORWARD(args)...};
      |                               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/../../tools/loaders/sharq/fastq_error.hpp:131:30:   required from here
  131 |             os << fmt::format("{:<70}", std::get<1>(it.second));
      |                   ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:3206:44:   in 'constexpr' expansion of 'fmt::v9::make_format_args<>(args#0)'
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:15: warning: possibly dangling reference to a temporary [-Wdangling-reference]
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |               ^~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:46: note: the temporary was destroyed at the end of the full expression 'fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >().fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >::map<std::__cxx11::basic_string<char> >((* & val))'
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/fmt.h:27,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/../../tools/loaders/sharq/fastq_error.hpp:12,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/../../tools/loaders/sharq/fastq_read.hpp:9,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/../../tools/loaders/sharq/fastq_parser.hpp:45,
                 from /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/test-sharq-reader.cpp:40:
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h: In instantiation of 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_value(T&&) [with Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; T = fmt::v9::basic_string_view<char>&]':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1777:29:   required from 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_arg(T&&) [with bool IS_PACKED = true; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; type <anonymous> = fmt::v9::detail::type::string_type; T = fmt::v9::basic_string_view<char>&; typename std::enable_if<IS_PACKED, int>::type <anonymous> = 0]'
 1777 |   return make_value<Context>(val);
      |          ~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1901:77:   required from 'constexpr fmt::v9::format_arg_store<Context, Args>::format_arg_store(T&& ...) [with T = {fmt::v9::basic_string_view<char>&, const char (&)[3]}; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; Args = {fmt::v9::basic_string_view<char>, char [3]}]'
 1899 |         data_{detail::make_arg<
      |               ~~~~~~~~~~~~~~~~~                                              
 1900 |             is_packed, Context,
      |             ~~~~~~~~~~~~~~~~~~~                                              
 1901 |             detail::mapped_type_constant<remove_cvref_t<T>, Context>::value>(
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
 1902 |             FMT_FORWARD(args))...} {
      |             ~~~~~~~~~~~~~~~~~~                                               
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1918:31:   required from 'OutputIt fmt::v9::format_to(OutputIt, format_string<T ...>, T&& ...) [with OutputIt = appender; T = {basic_string_view<char>&, const char (&)[3]}; typename std::enable_if<detail::is_output_iterator<OutputIt, char>::value, int>::type <anonymous> = 0; format_string<T ...> = basic_format_string<char, basic_string_view<char>&, const char (&)[3]>]'
 1918 |   return {FMT_FORWARD(args)...};
      |                               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/format-inl.h:65:14:   required from here
   65 |     format_to(it, FMT_STRING("{}{}"), message, SEP);
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:3235:52:   in 'constexpr' expansion of 'fmt::v9::make_format_args<>(args#0, args#1)'
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:15: warning: possibly dangling reference to a temporary [-Wdangling-reference]
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |               ^~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:46: note: the temporary was destroyed at the end of the full expression 'fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >().fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >::map<fmt::v9::basic_string_view<char> >((*(const fmt::v9::basic_string_view<char>*)(& val)))'
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h: In instantiation of 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_value(T&&) [with Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; T = std::__cxx11::basic_string<char>&]':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1777:29:   required from 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_arg(T&&) [with bool IS_PACKED = true; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; type <anonymous> = fmt::v9::detail::type::string_type; T = std::__cxx11::basic_string<char>&; typename std::enable_if<IS_PACKED, int>::type <anonymous> = 0]'
 1777 |   return make_value<Context>(val);
      |          ~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1901:77:   required from 'constexpr fmt::v9::format_arg_store<Context, Args>::format_arg_store(T&& ...) [with T = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, int&}; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, int}]'
 1899 |         data_{detail::make_arg<
      |               ~~~~~~~~~~~~~~~~~                                              
 1900 |             is_packed, Context,
      |             ~~~~~~~~~~~~~~~~~~~                                              
 1901 |             detail::mapped_type_constant<remove_cvref_t<T>, Context>::value>(
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
 1902 |             FMT_FORWARD(args))...} {
      |             ~~~~~~~~~~~~~~~~~~                                               
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1918:31:   required from 'std::string fmt::v9::format(format_string<T ...>, T&& ...) [with T = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, int&}; std::string = std::__cxx11::basic_string<char>; format_string<T ...> = basic_format_string<char, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, int&>]'
 1918 |   return {FMT_FORWARD(args)...};
      |                               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/../../tools/loaders/sharq/fastq_error.hpp:115:36:   required from here
  115 |             mMessage += fmt::format(" [{}:{}]", fname, line_number);
      |                         ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:3206:44:   in 'constexpr' expansion of 'fmt::v9::make_format_args<>(args#0, args#1)'
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:15: warning: possibly dangling reference to a temporary [-Wdangling-reference]
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |               ^~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:46: note: the temporary was destroyed at the end of the full expression 'fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >().fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >::map<std::__cxx11::basic_string<char> >((*(const std::__cxx11::basic_string<char>*)(& val)))'
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h: In instantiation of 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_value(T&&) [with Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; T = const std::__cxx11::basic_string<char>&]':
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1777:29:   required from 'constexpr fmt::v9::detail::value<Context> fmt::v9::detail::make_arg(T&&) [with bool IS_PACKED = true; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; type <anonymous> = fmt::v9::detail::type::string_type; T = const std::__cxx11::basic_string<char>&; typename std::enable_if<IS_PACKED, int>::type <anonymous> = 0]'
 1777 |   return make_value<Context>(val);
      |          ~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1901:77:   required from 'constexpr fmt::v9::format_arg_store<Context, Args>::format_arg_store(T&& ...) [with T = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&}; Context = fmt::v9::basic_format_context<fmt::v9::appender, char>; Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >}]'
 1899 |         data_{detail::make_arg<
      |               ~~~~~~~~~~~~~~~~~                                              
 1900 |             is_packed, Context,
      |             ~~~~~~~~~~~~~~~~~~~                                              
 1901 |             detail::mapped_type_constant<remove_cvref_t<T>, Context>::value>(
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
 1902 |             FMT_FORWARD(args))...} {
      |             ~~~~~~~~~~~~~~~~~~                                               
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1918:31:   required from 'std::string fmt::v9::format(format_string<T ...>, T&& ...) [with T = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&}; std::string = std::__cxx11::basic_string<char>; format_string<T ...> = basic_format_string<char, const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>]'
 1918 |   return {FMT_FORWARD(args)...};
      |                               ^
/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-sdk/../../tools/loaders/sharq/fastq_error.hpp:131:30:   required from here
  131 |             os << fmt::format("{:<70}", std::get<1>(it.second));
      |                   ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:3206:44:   in 'constexpr' expansion of 'fmt::v9::make_format_args<>(args#0)'
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:15: warning: possibly dangling reference to a temporary [-Wdangling-reference]
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |               ^~~
/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/inc/spdlog/fmt/bundled/core.h:1735:46: note: the temporary was destroyed at the end of the full expression 'fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >().fmt::v9::detail::arg_mapper<fmt::v9::basic_format_context<fmt::v9::appender, char> >::map<std::__cxx11::basic_string<char> >((* & val))'
 1735 |   const auto& arg = arg_mapper<Context>().map(FMT_FORWARD(val));
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
[100%] Linking CXX executable ../../../test-bin/test-sharq-writer
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/sharq && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-sharq-writer.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-sharq-writer.dir/link.d "CMakeFiles/test-sharq-writer.dir/test-sharq-writer.cpp.o" -o ../../../test-bin/test-sharq-writer  /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[100%] Built target test-sharq-writer
[100%] Linking CXX executable ../../../test-bin/test-sharq-parser
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/sharq && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-sharq-parser.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-sharq-parser.dir/link.d "CMakeFiles/test-sharq-parser.dir/test-sharq-parser.cpp.o" -o ../../../test-bin/test-sharq-parser  -lstdc++fs /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libbz2.so -lre2 -labsl_string_view
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[100%] Built target test-sharq-parser
[100%] Linking CXX executable ../../../test-bin/test-sharq-reader
cd /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/loaders/sharq && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-sharq-reader.dir/link.txt --verbose=1
/usr/bin/c++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/sra-sdk-3.2.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -DH5_USE_110_API -Wno-unused-function  -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test-sharq-reader.dir/link.d "CMakeFiles/test-sharq-reader.dir/test-sharq-reader.cpp.o" -o ../../../test-bin/test-sharq-reader  -lstdc++fs /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libkapp.a ../../../ilib/libtk-version.a /usr/lib/aarch64-linux-gnu/libktst.a /usr/lib/aarch64-linux-gnu/libncbi-vdb.so -lpthread -ldl -lm -lmbedx509 -lmbedtls -lmbedcrypto /usr/lib/aarch64-linux-gnu/libbz2.so -lre2 -labsl_string_view
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
[100%] Built target test-sharq-reader
make[2]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/CMakeFiles 0
make[1]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
   jh_build -O--buildsystem=cmake
   debian/rules override_dh_auto_test
make[1]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg'
cd obj-aarch64-linux-gnu  && \
    ctest --force-new-ctest-process --verbose -j1 -LE online
UpdateCTestConfiguration  from :/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/DartConfiguration.tcl
Parse Config file:/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/DartConfiguration.tcl
UpdateCTestConfiguration  from :/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/DartConfiguration.tcl
Parse Config file:/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/DartConfiguration.tcl
Test project /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu
Constructing a list of tests
Done constructing a list of tests
Updating test list for fixtures
Added 0 tests to meet fixture requirements
Checking test dependency graph...
Checking test dependency graph end
test 9
        Start   9: Test_NGS_Python_install

9: Test command: /usr/bin/python3 "/build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-python/setup.py" "-q" "install" "--user"
9: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/ngs/ngs-python
9: Environment variables: 
9:  PYTHONUSERBASE=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/tmp/python
9: Test timeout computed to be: 1500
9: /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated.
9: !!
9: 
9:         ********************************************************************************
9:         Please avoid running ``setup.py`` directly.
9:         Instead, use pypa/build, pypa/installer or other
9:         standards-based tools.
9: 
9:         See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
9:         ********************************************************************************
9: 
9: !!
9:   self.initialize_options()
9: /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: EasyInstallDeprecationWarning: easy_install command is deprecated.
9: !!
9: 
9:         ********************************************************************************
9:         Please avoid running ``setup.py`` and ``easy_install``.
9:         Instead, use pypa/build, pypa/installer or other
9:         standards-based tools.
9: 
9:         See https://github.com/pypa/setuptools/issues/917 for details.
9:         ********************************************************************************
9: 
9: !!
9:   self.initialize_options()
9: zip_safe flag not set; analyzing archive contents...
  1/426 Test   #9: Test_NGS_Python_install ................................   Passed    0.75 sec
test 15
        Start  15: Ngs_MakeDB

15: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/ngs-makedb
15: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test/data
15: Test timeout computed to be: 1500
15: Running 1 test case...
15: SparseFragmentBlobs (0 s)
15: 
15: *** No errors detected (0 s total)
  2/426 Test  #15: Ngs_MakeDB .............................................   Passed    0.11 sec
test 16
        Start  16: Test_Ngs

16: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/test-ngs
16: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/ngs-vdb/test
16: Test timeout computed to be: 1500
16: 
16: *** No errors detected (0 s total)
  3/426 Test  #16: Test_Ngs ...............................................   Passed    0.01 sec
test 32
        Start  32: Test_GeneralWriter_RoundTrip

32: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/test-general-writer && /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/gw-dumper -v ./actual/test-general-writer.gw | grep --text -v timestamp | grep --text -v pid >./actual/test-general-writer.stdout && diff ./actual/test-general-writer.stdout ./expected/test-general-writer.stdout"
32: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/general-writer/test
32: Test timeout computed to be: 1500
32: CreateGw Success
32: ---------------------------------
32: addTable Success
32: ---------------------------------
32: addColumn Success
32: ---------------------------------
32: dbAddDatabase Success
32: ---------------------------------
32: dbAddTable Success
32: ---------------------------------
32: write Success
32: ---------------------------------
32: setDBMetadataNode Success
32: ---------------------------------
32: setTblMetadataNode Success
32: ---------------------------------
32: setColMetadataNode Success
32: ---------------------------------
32: setProgMsg Success
32: ---------------------------------
32: Attempting add table after endStream
32: state violation adding table
32: addTable correctly failed
32: endStream Success
32: ---------------------------------
  4/426 Test  #32: Test_GeneralWriter_RoundTrip ...........................   Passed    0.01 sec
test 33
        Start  33: GeneralLoaderWhiteBox

33: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/test-general-loader
33: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test
33: Test timeout computed to be: 1500
33: Unpacked protocol: Running 65 test cases...
33: EmptyInput (0 s)
33: ShortInput (0 s)
33: BadSignature (0 s)
33: BadEndianness (0 s)
33: ReverseEndianness (0 s)
33: LaterVersion (0 s)
33: BadSchemaFileName (0 s)
33: BadSchemaFileName_Long (0 s)
33: BadSchemaName (0 s)
33: BadSchemaName_Long (0 s)
33: BadTableName (0 s)
33: BadTableName_Long (0 s)
33: DuplicateTableId (0 s)
33: BadColumnName (0 s)
33: BadTableId (0 s)
33: DuplicateColumnName (0 s)
33: DuplicateColumnId (0 s)
33: NoOpenStreamEvent (0 s)
33: NoCloseStreamEvent (0 s)
33: NoColumns (0 s)
33: SoftwareName (0 s)
33: SoftwareName_BadVersion (0 s)
33: DBAddDatabase (0 s)
33: DBAddSubDatabase (0 s)
33: DBAddTable (0 s)
33: DBAddTableToSubDb (0 s)
33: DBMetadataNode (0 s)
33: DBMetadataNodeAttr (0 s)
33: SubDBMetadataNode (0 s)
33: TblMetadataNode (0 s)
33: TblMetadataNodeAttr (0 s)
33: ColMetadataNode (0 s)
33: ColMetadataNodeAttr (0 s)
33: NoData (0 s)
33: Chunk_BadColumnId (0 s)
33: WriteNoCommit (0 s)
33: CommitBadTableId (0 s)
33: OneColumnOneCellOneChunk (0 s)
33: OneColumnOneCellOneChunk_Long (0 s)
33: OneColumnOneCellManyChunks (0 s)
33: IntegerCompression_MinimumCompression (0 s)
33: IntegerCompression_MaximumCompression (0 s)
33: IntegerCompression_MultipleValues (0 s)
33: OneColumnDefaultNoWrite (0 s)
33: OneColumnDefaultNoWrite_Long (0 s)
33: MoveAhead (0 s)
33: OneColumnDefaultOverwite (0 s)
33: OneColumnChangeDefault (0 s)
33: OneColumnDataAndDefaultsMixed (0 s)
33: TwoColumnsFullRow (0 s)
33: TwoColumnsIncompleteRow (0 s)
33: TwoColumnsPartialRowWithDefaults (0 s)
33: TwoColumnsPartialRowWithDefaultsAndOverride (0 s)
33: EmptyDefault_String (0 s)
33: EmptyDefault_Int (0 s)
33: MultipleTables_Multiple_Columns_MultipleRows (0 s)
33: AdditionalSchemaIncludePaths_Single (0 s)
33: AdditionalSchemaIncludePaths_Multiple (0 s)
33: AdditionalSchemaFiles_Single (0 s)
33: AdditionalSchemaFiles_Multiple (0 s)
33: ErrorMessage (0 s)
33: ErrorMessage_Long (0 s)
33: LogMessage (0 s)
33: ProgressMessage (0 s)
33: TargetOverride (0 s)
33: 
33: *** No errors detected (0 s total)
33: Packed protocol: Running 65 test cases...
33: EmptyInput (0 s)
33: ShortInput (0 s)
33: BadSignature (0 s)
33: BadEndianness (0 s)
33: ReverseEndianness (0 s)
33: LaterVersion (0 s)
33: BadSchemaFileName (0 s)
33: BadSchemaFileName_Long (0 s)
33: BadSchemaName (0 s)
33: BadSchemaName_Long (0 s)
33: BadTableName (0 s)
33: BadTableName_Long (0 s)
33: DuplicateTableId (0 s)
33: BadColumnName (0 s)
33: BadTableId (0 s)
33: DuplicateColumnName (0 s)
33: DuplicateColumnId (0 s)
33: NoOpenStreamEvent (0 s)
33: NoCloseStreamEvent (0 s)
33: NoColumns (0 s)
33: SoftwareName (0 s)
33: SoftwareName_BadVersion (0 s)
33: DBAddDatabase (0 s)
33: DBAddSubDatabase (0 s)
33: DBAddTable (0 s)
33: DBAddTableToSubDb (0 s)
33: DBMetadataNode (0 s)
33: DBMetadataNodeAttr (0 s)
33: SubDBMetadataNode (0 s)
33: TblMetadataNode (0 s)
33: TblMetadataNodeAttr (0 s)
33: ColMetadataNode (0 s)
33: ColMetadataNodeAttr (0 s)
33: NoData (0 s)
33: Chunk_BadColumnId (0 s)
33: WriteNoCommit (0 s)
33: CommitBadTableId (0 s)
33: OneColumnOneCellOneChunk (0 s)
33: OneColumnOneCellOneChunk_Long (0 s)
33: OneColumnOneCellManyChunks (0 s)
33: IntegerCompression_MinimumCompression (0 s)
33: IntegerCompression_MaximumCompression (0 s)
33: IntegerCompression_MultipleValues (0 s)
33: OneColumnDefaultNoWrite (0 s)
33: OneColumnDefaultNoWrite_Long (0 s)
33: MoveAhead (0 s)
33: OneColumnDefaultOverwite (0 s)
33: OneColumnChangeDefault (0 s)
33: OneColumnDataAndDefaultsMixed (0 s)
33: TwoColumnsFullRow (0 s)
33: TwoColumnsIncompleteRow (0 s)
33: TwoColumnsPartialRowWithDefaults (0 s)
33: TwoColumnsPartialRowWithDefaultsAndOverride (0 s)
33: EmptyDefault_String (0 s)
33: EmptyDefault_Int (0 s)
33: MultipleTables_Multiple_Columns_MultipleRows (0 s)
33: AdditionalSchemaIncludePaths_Single (0 s)
33: AdditionalSchemaIncludePaths_Multiple (0 s)
33: AdditionalSchemaFiles_Single (0 s)
33: AdditionalSchemaFiles_Multiple (0 s)
33: ErrorMessage (0 s)
33: ErrorMessage_Long (0 s)
33: LogMessage (0 s)
33: ProgressMessage (0 s)
33: TargetOverride (0 s)
33: 
33: *** No errors detected (0 s total)
  5/426 Test  #33: GeneralLoaderWhiteBox ..................................   Passed    0.70 sec
test 34
        Start  34: makeinputs

34: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/makeinputs
34: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test
34: Test timeout computed to be: 1500
  6/426 Test  #34: makeinputs .............................................   Passed    0.01 sec
test 35
        Start  35: GeneralLoader-1.0-Basic-Unpacked

35: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test" "1" "0"
35: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test
35: Test timeout computed to be: 1500
35: runtestcase.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test 1 0
35: running test case 0
35: runtestcase.sh: 56: test: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin: unexpected operator
35: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db/general-loader does not exist. Skipping the test.
  7/426 Test  #35: GeneralLoader-1.0-Basic-Unpacked .......................   Passed    0.00 sec
test 36
        Start  36: GeneralLoader-1.1-Basic-Packed

36: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test" "1packed" "0"
36: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test
36: Test timeout computed to be: 1500
36: runtestcase.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test 1packed 0
36: running test case 0
36: runtestcase.sh: 56: test: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin: unexpected operator
36: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db/general-loader does not exist. Skipping the test.
  8/426 Test  #36: GeneralLoader-1.1-Basic-Packed .........................   Passed    0.00 sec
test 37
        Start  37: GeneralLoader-1.2-TargetDbOverride

37: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test" "1override" "0" "--target actual/1override/db"
37: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test
37: Test timeout computed to be: 1500
37: runtestcase.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test 1override 0 --target actual/1override/db
37: running test case 0
37: runtestcase.sh: 56: test: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin: unexpected operator
37: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db/general-loader does not exist. Skipping the test.
  9/426 Test  #37: GeneralLoader-1.2-TargetDbOverride .....................   Passed    0.00 sec
test 38
        Start  38: GeneralLoader-1.3-TargetDbOverrideShorthand

38: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test" "1override" "0" "-T actual/1override/db"
38: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test
38: Test timeout computed to be: 1500
38: runtestcase.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test 1override 0 -T actual/1override/db
38: running test case 0
38: runtestcase.sh: 56: test: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin: unexpected operator
38: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db/general-loader does not exist. Skipping the test.
 10/426 Test  #38: GeneralLoader-1.3-TargetDbOverrideShorthand ............   Passed    0.00 sec
test 39
        Start  39: GeneralLoader-2.0-ErrorMessageEvent-Unpacked

39: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test" "2" "3" "-L=err"
39: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test
39: Test timeout computed to be: 1500
39: runtestcase.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test 2 3 -L=err
39: running test case 3
39: runtestcase.sh: 56: test: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin: unexpected operator
39: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db/general-loader does not exist. Skipping the test.
 11/426 Test  #39: GeneralLoader-2.0-ErrorMessageEvent-Unpacked ...........   Passed    0.00 sec
test 40
        Start  40: GeneralLoader-2.1-ErrorMessageEvent-Packed

40: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test" "2packed" "3" "-L=err"
40: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test
40: Test timeout computed to be: 1500
40: runtestcase.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test 2packed 3 -L=err
40: running test case 3
40: runtestcase.sh: 56: test: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin: unexpected operator
40: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db/general-loader does not exist. Skipping the test.
 12/426 Test  #40: GeneralLoader-2.1-ErrorMessageEvent-Packed .............   Passed    0.00 sec
test 41
        Start  41: GeneralLoader-3.0-EmptyDefaultValues-Unpacked

41: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test" "3" "0"
41: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test
41: Test timeout computed to be: 1500
41: runtestcase.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test 3 0
41: running test case 0
41: runtestcase.sh: 56: test: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin: unexpected operator
41: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db/general-loader does not exist. Skipping the test.
 13/426 Test  #41: GeneralLoader-3.0-EmptyDefaultValues-Unpacked ..........   Passed    0.00 sec
test 42
        Start  42: GeneralLoader-3.1-EmptyDefaultValues-Packed

42: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test" "3" "0"
42: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test
42: Test timeout computed to be: 1500
42: runtestcase.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test 3 0
42: running test case 0
42: runtestcase.sh: 56: test: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin: unexpected operator
42: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db/general-loader does not exist. Skipping the test.
 14/426 Test  #42: GeneralLoader-3.1-EmptyDefaultValues-Packed ............   Passed    0.00 sec
test 43
        Start  43: GeneralLoader-4.0-MoveAheadEvent-Unpacked

43: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test" "4" "0"
43: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test
43: Test timeout computed to be: 1500
43: runtestcase.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test 4 0
43: running test case 0
43: runtestcase.sh: 56: test: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin: unexpected operator
43: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db/general-loader does not exist. Skipping the test.
 15/426 Test  #43: GeneralLoader-4.0-MoveAheadEvent-Unpacked ..............   Passed    0.00 sec
test 44
        Start  44: GeneralLoader-4.1-MoveAheadEvent-Packed

44: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test" "4packed" "0"
44: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test
44: Test timeout computed to be: 1500
44: runtestcase.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test 4packed 0
44: running test case 0
44: runtestcase.sh: 56: test: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin: unexpected operator
44: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db/general-loader does not exist. Skipping the test.
 16/426 Test  #44: GeneralLoader-4.1-MoveAheadEvent-Packed ................   Passed    0.00 sec
test 45
        Start  45: GeneralLoader-5.0-IntegerConversion

45: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test" "5packed" "0"
45: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test
45: Test timeout computed to be: 1500
45: runtestcase.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test 5packed 0
45: running test case 0
45: runtestcase.sh: 56: test: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin: unexpected operator
45: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump db/general-loader does not exist. Skipping the test.
 17/426 Test  #45: GeneralLoader-5.0-IntegerConversion ....................   Passed    0.00 sec
test 46
        Start  46: GeneralLoader-6.0-SoftwareName-Unpacked

46: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test" "6" "0" "-L=info" "SOFTWARE/formatter"
46: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test
46: Test timeout computed to be: 1500
46: runtestcase.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test 6 0 -L=info SOFTWARE/formatter
46: running test case 6
46: cat input/6.gl | /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader -L=info 1>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/6/load.stdout 2>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/6/load.stderr
46: Load succeeded, dumping and matching stdout
46: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db SOFTWARE/formatter 1>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/6/dump.stdout 2>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/6/dump.stderr
 18/426 Test  #46: GeneralLoader-6.0-SoftwareName-Unpacked ................   Passed    0.38 sec
test 47
        Start  47: GeneralLoader-6.1-SoftwareName-Packed

47: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test" "6packed" "0" "-L=info" "SOFTWARE/formatter"
47: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test
47: Test timeout computed to be: 1500
47: runtestcase.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test 6packed 0 -L=info SOFTWARE/formatter
47: running test case 6packed
47: cat input/6packed.gl | /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader -L=info 1>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/6packed/load.stdout 2>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/6packed/load.stderr
47: Load succeeded, dumping and matching stdout
47: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db SOFTWARE/formatter 1>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/6packed/dump.stdout 2>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/6packed/dump.stderr
 19/426 Test  #47: GeneralLoader-6.1-SoftwareName-Packed ..................   Passed    0.23 sec
test 48
        Start  48: GeneralLoader-7.0-MetadataAttrsDb-Unpacked

48: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test" "7" "0" "-L=info" "dbmeta"
48: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test
48: Test timeout computed to be: 1500
48: runtestcase.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test 7 0 -L=info dbmeta
48: running test case 7
48: cat input/7.gl | /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader -L=info 1>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/7/load.stdout 2>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/7/load.stderr
48: Load succeeded, dumping and matching stdout
48: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db dbmeta 1>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/7/dump.stdout 2>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/7/dump.stderr
 20/426 Test  #48: GeneralLoader-7.0-MetadataAttrsDb-Unpacked .............   Passed    0.25 sec
test 49
        Start  49: GeneralLoader-7.1-MetadataAttrsDb-Packed

49: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test" "7packed" "0" "-L=info" "dbmeta"
49: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test
49: Test timeout computed to be: 1500
49: runtestcase.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test 7packed 0 -L=info dbmeta
49: running test case 7packed
49: cat input/7packed.gl | /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader -L=info 1>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/7packed/load.stdout 2>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/7packed/load.stderr
49: Load succeeded, dumping and matching stdout
49: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db dbmeta 1>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/7packed/dump.stdout 2>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/7packed/dump.stderr
 21/426 Test  #49: GeneralLoader-7.1-MetadataAttrsDb-Packed ...............   Passed    0.48 sec
test 50
        Start  50: GeneralLoader-8.0-MetadataAttrsTbl-Unpacked

50: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db/tbl/REFERENCE" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test" "8" "0" "-L=info" "tblmeta"
50: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test
50: Test timeout computed to be: 1500
50: runtestcase.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db/tbl/REFERENCE /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test 8 0 -L=info tblmeta
50: running test case 8
50: cat input/8.gl | /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader -L=info 1>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/8/load.stdout 2>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/8/load.stderr
50: Load succeeded, dumping and matching stdout
50: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db/tbl/REFERENCE tblmeta 1>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/8/dump.stdout 2>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/8/dump.stderr
 22/426 Test  #50: GeneralLoader-8.0-MetadataAttrsTbl-Unpacked ............   Passed    0.35 sec
test 51
        Start  51: GeneralLoader-8.1-MetadataAttrsTbl-Packed

51: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db/tbl/REFERENCE" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test" "8packed" "0" "-L=info" "tblmeta"
51: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test
51: Test timeout computed to be: 1500
51: runtestcase.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db/tbl/REFERENCE /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test 8packed 0 -L=info tblmeta
51: running test case 8packed
51: cat input/8packed.gl | /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader -L=info 1>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/8packed/load.stdout 2>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/8packed/load.stderr
51: Load succeeded, dumping and matching stdout
51: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db/tbl/REFERENCE tblmeta 1>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/8packed/dump.stdout 2>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/8packed/dump.stderr
 23/426 Test  #51: GeneralLoader-8.1-MetadataAttrsTbl-Packed ..............   Passed    0.45 sec
test 52
        Start  52: GeneralLoader-9.0-MetadataAttrsCol-Unpacked

52: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db/tbl/REFERENCE/col/PRIMARY_ALIGNMENT_IDS" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test" "9" "0" "-L=info" "colmeta"
52: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test
52: Test timeout computed to be: 1500
52: runtestcase.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db/tbl/REFERENCE/col/PRIMARY_ALIGNMENT_IDS /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test 9 0 -L=info colmeta
52: running test case 9
52: cat input/9.gl | /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader -L=info 1>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/9/load.stdout 2>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/9/load.stderr
52: Load succeeded, dumping and matching stdout
52: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db/tbl/REFERENCE/col/PRIMARY_ALIGNMENT_IDS colmeta 1>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/9/dump.stdout 2>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/9/dump.stderr
 24/426 Test  #52: GeneralLoader-9.0-MetadataAttrsCol-Unpacked ............   Passed    0.49 sec
test 53
        Start  53: GeneralLoader-9.1-MetadataAttrsCol-Packed

53: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db/tbl/REFERENCE/col/PRIMARY_ALIGNMENT_IDS" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test" "9packed" "0" "-L=info" "colmeta"
53: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test
53: Test timeout computed to be: 1500
53: runtestcase.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db/tbl/REFERENCE/col/PRIMARY_ALIGNMENT_IDS /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test 9packed 0 -L=info colmeta
53: running test case 9packed
53: cat input/9packed.gl | /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader -L=info 1>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/9packed/load.stdout 2>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/9packed/load.stderr
53: Load succeeded, dumping and matching stdout
53: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta db/tbl/REFERENCE/col/PRIMARY_ALIGNMENT_IDS colmeta 1>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/9packed/dump.stdout 2>/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/actual/9packed/dump.stderr
 25/426 Test  #53: GeneralLoader-9.1-MetadataAttrsCol-Packed ..............   Passed    0.39 sec
test 54
        Start  54: bio-end-makeinputs

54: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/bio-end-makeinputs
54: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema
54: Test timeout computed to be: 1500
 26/426 Test  #54: bio-end-makeinputs .....................................   Passed    0.02 sec
test 55
        Start  55: BioEnd-Excl-1

55: Test command: /usr/bin/sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema" "bio-end" "excl-1" "0" "n" "-I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema:/usr/include/ncbi-vdb" "-L=debug"
55: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema
55: Test timeout computed to be: 1500
55: running test bio-end:excl-1
 27/426 Test  #55: BioEnd-Excl-1 ..........................................   Passed    0.34 sec
test 56
        Start  56: BioEnd-Excl-2

56: Test command: /usr/bin/sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema" "bio-end" "excl-2" "0" "n" "-I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema:/usr/include/ncbi-vdb"
56: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema
56: Test timeout computed to be: 1500
56: running test bio-end:excl-2
 28/426 Test  #56: BioEnd-Excl-2 ..........................................   Passed    0.34 sec
test 57
        Start  57: BioEnd-Excl-3

57: Test command: /usr/bin/sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema" "bio-end" "excl-3" "0" "n" "-I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema:/usr/include/ncbi-vdb"
57: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema
57: Test timeout computed to be: 1500
57: running test bio-end:excl-3
 29/426 Test  #57: BioEnd-Excl-3 ..........................................   Passed    0.12 sec
test 58
        Start  58: BioEnd-Excl-4

58: Test command: /usr/bin/sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema" "bio-end" "excl-4" "0" "n" "-I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema:/usr/include/ncbi-vdb"
58: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema
58: Test timeout computed to be: 1500
58: running test bio-end:excl-4
 30/426 Test  #58: BioEnd-Excl-4 ..........................................   Passed    0.32 sec
test 59
        Start  59: BioEnd-Incl-1

59: Test command: /usr/bin/sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema" "bio-end" "incl-1" "0" "n" "-I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema:/usr/include/ncbi-vdb"
59: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema
59: Test timeout computed to be: 1500
59: running test bio-end:incl-1
 31/426 Test  #59: BioEnd-Incl-1 ..........................................   Passed    0.34 sec
test 60
        Start  60: IdxText-CI-1

60: Test command: /usr/bin/sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema" "bio-end" "excl-1" "0" "n" "-I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema:/usr/include/ncbi-vdb"
60: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema
60: Test timeout computed to be: 1500
60: running test bio-end:excl-1
 32/426 Test  #60: IdxText-CI-1 ...........................................   Passed    0.38 sec
test 61
        Start  61: idx-text-makeinputs

61: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/idx-text-makeinputs
61: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema
61: Test timeout computed to be: 1500
 33/426 Test  #61: idx-text-makeinputs ....................................   Passed    0.02 sec
test 62
        Start  62: IdxText-ci-1

62: Test command: /usr/bin/sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema" "idx-text" "ci-1" "0" "y" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/idx-text-checklookup" "-I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema:/usr/include/ncbi-vdb"
62: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema
62: Test timeout computed to be: 1500
62: running test idx-text:ci-1
 34/426 Test  #62: IdxText-ci-1 ...........................................   Passed    0.37 sec
test 63
        Start  63: IdxText-ci-2

63: Test command: /usr/bin/sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema" "idx-text" "ci-2" "0" "y" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/idx-text-checklookup" "-I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema:/usr/include/ncbi-vdb"
63: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema
63: Test timeout computed to be: 1500
63: running test idx-text:ci-2
 35/426 Test  #63: IdxText-ci-2 ...........................................   Passed    0.30 sec
test 64
        Start  64: IdxText-ci-3

64: Test command: /usr/bin/sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema" "idx-text" "ci-3" "0" "y" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/idx-text-checklookup" "-I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema:/usr/include/ncbi-vdb"
64: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema
64: Test timeout computed to be: 1500
64: running test idx-text:ci-3
 36/426 Test  #64: IdxText-ci-3 ...........................................   Passed    0.38 sec
test 65
        Start  65: IdxText-ci-4

65: Test command: /usr/bin/sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema" "idx-text" "ci-4" "0" "y" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/idx-text-checklookup" "-I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema:/usr/include/ncbi-vdb"
65: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema
65: Test timeout computed to be: 1500
65: running test idx-text:ci-4
 37/426 Test  #65: IdxText-ci-4 ...........................................   Passed    0.35 sec
test 66
        Start  66: IdxText-ci-5

66: Test command: /usr/bin/sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema" "idx-text" "ci-5" "0" "n" "-I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema:/usr/include/ncbi-vdb"
66: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema
66: Test timeout computed to be: 1500
66: running test idx-text:ci-5
 38/426 Test  #66: IdxText-ci-5 ...........................................   Passed    0.27 sec
test 67
        Start  67: IdxText-cs-1

67: Test command: /usr/bin/sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema" "idx-text" "cs-1" "0" "y" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/idx-text-checklookup" "-I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema:/usr/include/ncbi-vdb"
67: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema
67: Test timeout computed to be: 1500
67: running test idx-text:cs-1
 39/426 Test  #67: IdxText-cs-1 ...........................................   Passed    0.33 sec
test 68
        Start  68: IdxText-cs-2

68: Test command: /usr/bin/sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema" "idx-text" "cs-2" "0" "y" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/idx-text-checklookup" "-I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema:/usr/include/ncbi-vdb"
68: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema
68: Test timeout computed to be: 1500
68: running test idx-text:cs-2
 40/426 Test  #68: IdxText-cs-2 ...........................................   Passed    0.35 sec
test 69
        Start  69: IdxText-cs-3

69: Test command: /usr/bin/sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema/runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema" "idx-text" "cs-3" "0" "n" "-I/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema:/usr/include/ncbi-vdb"
69: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/loaders/general-loader/test/vschema
69: Test timeout computed to be: 1500
69: running test idx-text:cs-3
 41/426 Test  #69: IdxText-cs-3 ...........................................   Passed    0.12 sec
test 70
        Start  70: Ref-Variation-1.0

70: Test command: /usr/bin/sh "./have-access.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "ref-variation"
70: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/ref-variation/test
70: Test timeout computed to be: 1500
70: ./have-access.sh: 6: vdb-config: not found
70: no access to repository, skipping ref-variation test...
 42/426 Test  #70: Ref-Variation-1.0 ......................................   Passed    0.02 sec
test 71
        Start  71: Var-Expand-1.0

71: Test command: /usr/bin/sh "./have-access.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "var-expand"
71: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/ref-variation/test
71: Test timeout computed to be: 1500
71: ./have-access.sh: 6: vdb-config: not found
71: no access to repository, skipping var-expand test...
 43/426 Test  #71: Var-Expand-1.0 .........................................   Passed    0.02 sec
test 74
        Start  74: Test_SraSearch_SearchBlock

74: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_SraSearch_SearchBlock
74: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test
74: Test timeout computed to be: 1500
74: Running 8 test cases...
74: FgrepDumb (0 s)
74: SearchFgrepBoyerMoore (0 s)
74: SearchFgrepAho (0 s)
74: SearchAgrepDP (0 s)
74: SearchNucStrstr_NoExpr_NoCoords (0 s)
74: SearchNucStrstr_NoExpr_Coords_NotSupported (0 s)
74: SearchNucStrstr_Expr_Coords (0 s)
74: SearchSmithWaterman_Coords_NotSupported (0 s)
74: 
74: *** No errors detected (0 s total)
 44/426 Test  #74: Test_SraSearch_SearchBlock .............................   Passed    0.02 sec
test 75
        Start  75: Test_SraSearchBlockWhiteBox

75: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_SraSearch_SearchBlock
75: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/external/sra-search/test
75: Test timeout computed to be: 1500
75: Running 8 test cases...
75: FgrepDumb (0 s)
75: SearchFgrepBoyerMoore (0 s)
75: SearchFgrepAho (0 s)
75: SearchAgrepDP (0 s)
75: SearchNucStrstr_NoExpr_NoCoords (0 s)
75: SearchNucStrstr_NoExpr_Coords_NotSupported (0 s)
75: SearchNucStrstr_Expr_Coords (0 s)
75: SearchSmithWaterman_Coords_NotSupported (0 s)
75: 
75: *** No errors detected (0 s total)
 45/426 Test  #75: Test_SraSearchBlockWhiteBox ............................   Passed    0.02 sec
test 78
        Start  78: Test_SraSearch-1.0-h

78: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "1.0-h" "--args" "-h"
78: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test
78: Test timeout computed to be: 1500
78: running test case 1.0-h... passed
 46/426 Test  #78: Test_SraSearch-1.0-h ...................................   Passed    0.01 sec
test 79
        Start  79: Test_SraSearch-1.1-help

79: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "1.1-help" "--args" "--help"
79: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test
79: Test timeout computed to be: 1500
79: running test case 1.1-help... passed
 47/426 Test  #79: Test_SraSearch-1.1-help ................................   Passed    0.01 sec
test 80
        Start  80: Test_SraSearch-1.2-V

80: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test/execandgrep.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-search -V" "3.2.1"
80: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test
80: Test timeout computed to be: 1500
80: sra-search : 3.2.1
 48/426 Test  #80: Test_SraSearch-1.2-V ...................................   Passed    0.01 sec
test 81
        Start  81: SraSearch-1.3-version

81: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test/execandgrep.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-search --version" "3.2.1"
81: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test
81: Test timeout computed to be: 1500
81: sra-search : 3.2.1
 49/426 Test  #81: SraSearch-1.3-version ..................................   Passed    0.01 sec
test 82
        Start  82: Test_SraSearch-2.0-no-args

82: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "2.0-no-args" "--rc" "3"
82: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test
82: Test timeout computed to be: 1500
82: running test case 2.0-no-args... passed
 50/426 Test  #82: Test_SraSearch-2.0-no-args .............................   Passed    0.01 sec
test 83
        Start  83: Test_SraSearch-2.1-no-run

83: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "2.1-no-run" "--rc" "3" "--args" "AGCT"
83: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test
83: Test timeout computed to be: 1500
83: running test case 2.1-no-run... passed
 51/426 Test  #83: Test_SraSearch-2.1-no-run ..............................   Passed    0.01 sec
test 84
        Start  84: Test_SraSearch-2.2-missing-algorithm

84: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "2.2-missing-algorithm" "--rc" "3" "--args" "AGCT SRR000001 -a"
84: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test
84: Test timeout computed to be: 1500
84: running test case 2.2-missing-algorithm... passed
 52/426 Test  #84: Test_SraSearch-2.2-missing-algorithm ...................   Passed    0.01 sec
test 85
        Start  85: Test_SraSearch-2.3-bad-algorithm

85: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "2.3-bad-algorithm" "--rc" "3" "--args" "--algorithm bad AGCT SRR000001"
85: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test
85: Test timeout computed to be: 1500
85: running test case 2.3-bad-algorithm... passed
 53/426 Test  #85: Test_SraSearch-2.3-bad-algorithm .......................   Passed    0.01 sec
test 102
        Start 102: Test_SraSearch-6.0.1-imperfect-match-no-arg

102: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "6.0.1-imperfect-match-no-arg" "--args" "AGCTAGCTAGCT SRR000001 -S" "--rc" "3"
102: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test
102: Test timeout computed to be: 1500
102: running test case 6.0.1-imperfect-match-no-arg... passed
 54/426 Test #102: Test_SraSearch-6.0.1-imperfect-match-no-arg ............   Passed    0.01 sec
test 103
        Start 103: Test_SraSearch-6.0.2-imperfect-match-bad-arg

103: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "6.0.2-imperfect-match-bad-arg" "--args" "AGCTAGCTAGCT SRR000001 -S qq" "--rc" "3"
103: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test
103: Test timeout computed to be: 1500
103: running test case 6.0.2-imperfect-match-bad-arg... passed
 55/426 Test #103: Test_SraSearch-6.0.2-imperfect-match-bad-arg ...........   Passed    0.06 sec
test 104
        Start 104: Test_SraSearch-6.0.3-imperfect-match-default

104: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "6.0.3-imperfect-match-default" "--args" "AGCTAGCTAGCT -S 90 SRR000001" "--rc" "3"
104: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test
104: Test timeout computed to be: 1500
104: running test case 6.0.3-imperfect-match-default... passed
 56/426 Test #104: Test_SraSearch-6.0.3-imperfect-match-default ...........   Passed    0.10 sec
test 105
        Start 105: Test_SraSearch-6.1-imperfect-match-fgrep-standard

105: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "6.1-imperfect-match-fgrep-standard" "--args" "AGCTAGCTAGCT --score 90 -a FgrepStandard SRR000001" "--rc" "3"
105: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test
105: Test timeout computed to be: 1500
105: running test case 6.1-imperfect-match-fgrep-standard... passed
 57/426 Test #105: Test_SraSearch-6.1-imperfect-match-fgrep-standard ......   Passed    0.11 sec
test 106
        Start 106: Test_SraSearch-6.2-imperfect-match-fgrep-boyer-moore

106: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "6.2-imperfect-match-fgrep-boyer-moore" "--args" "AGCTAGCTAGCT --score 90 --algorithm FgrepBoyerMoore SRR000001" "--rc" "3"
106: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test
106: Test timeout computed to be: 1500
106: running test case 6.2-imperfect-match-fgrep-boyer-moore... passed
 58/426 Test #106: Test_SraSearch-6.2-imperfect-match-fgrep-boyer-moore ...   Passed    0.12 sec
test 107
        Start 107: Test_SraSearch-6.3-imperfect-match-fgrep-aho

107: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "6.3-imperfect-match-fgrep-aho" "--args" "AGCTAGCTAGCT --score 90 --algorithm FgrepAho SRR000001" "--rc" "3"
107: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test
107: Test timeout computed to be: 1500
107: running test case 6.3-imperfect-match-fgrep-aho... passed
 59/426 Test #107: Test_SraSearch-6.3-imperfect-match-fgrep-aho ...........   Passed    0.13 sec
test 112
        Start 112: SraSearch-6.8-imperfect-match-nucstrstr

112: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "6.8-imperfect-match-nucstrstr" "--args" "AGCTAGCTAGCT --score 90 --algorithm NucStrstr SRR000001" "--rc" "3"
112: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test
112: Test timeout computed to be: 1500
112: running test case 6.8-imperfect-match-nucstrstr... passed
 60/426 Test #112: SraSearch-6.8-imperfect-match-nucstrstr ................   Passed    0.10 sec
test 114
        Start 114: Test_SraSearch-7.0.1-threads-no-arg

114: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "7.0.1-threads-no-arg" "--rc" "3" "--args" "AGCTAGCTAGCT SRR600094 SRR600095 -T"
114: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test
114: Test timeout computed to be: 1500
114: running test case 7.0.1-threads-no-arg... passed
 61/426 Test #114: Test_SraSearch-7.0.1-threads-no-arg ....................   Passed    0.19 sec
test 115
        Start 115: Test_SraSearch-7.0.2-threads-bad-arg

115: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "7.0.2-threads-bad-arg" "--rc" "3" "--args" "AGCTAGCTAGCT SRR600094 SRR600095 --threads -1"
115: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test
115: Test timeout computed to be: 1500
115: running test case 7.0.2-threads-bad-arg... passed
 62/426 Test #115: Test_SraSearch-7.0.2-threads-bad-arg ...................   Passed    0.18 sec
test 120
        Start 120: SlowTest_SraSearch-8.0-nothing-found

120: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "8.0-nothing-found" "--rc" "3" "--args" "TTTTTTTTAAAAAAACCCC -T 1 SRR000001"
120: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test
120: Test timeout computed to be: 1500
120: running test case 8.0-nothing-found... passed
 63/426 Test #120: SlowTest_SraSearch-8.0-nothing-found ...................   Passed    0.18 sec
test 124
        Start 124: Test_SraSearch-9.3-reference-expression

124: Test command: /usr/bin/sh "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-search" "9.3-reference-expression" "--args" "ACGTAGGGTCC SRR600094 --reference --expression" "--rc" "3"
124: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/external/sra-search/test
124: Test timeout computed to be: 1500
124: running test case 9.3-reference-expression... passed
 64/426 Test #124: Test_SraSearch-9.3-reference-expression ................   Passed    0.20 sec
test 126
        Start 126: dump-ref-fasta-1.0-h

126: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/dump_ref_fasta/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/dump-ref-fasta" "1.0-h" "--args" "-h"
126: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/dump_ref_fasta/test
126: Test timeout computed to be: 1500
126: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/dump_ref_fasta/test/runtestcase.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/dump-ref-fasta 1.0-h --args -h
126: running test case 1.0-h... passed
 65/426 Test #126: dump-ref-fasta-1.0-h ...................................   Passed    0.18 sec
test 127
        Start 127: dump-ref-fasta-1.1-help

127: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/dump_ref_fasta/test/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/dump-ref-fasta" "1.1-help" "--args" "--help"
127: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/dump_ref_fasta/test
127: Test timeout computed to be: 1500
127: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/dump_ref_fasta/test/runtestcase.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/dump-ref-fasta 1.1-help --args --help
127: running test case 1.1-help... passed
 66/426 Test #127: dump-ref-fasta-1.1-help ................................   Passed    0.19 sec
test 128
        Start 128: dump-ref-fasta-1.2-V

128: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/dump_ref_fasta/test/execandgrep.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/dump-ref-fasta -V" "3.2.1"
128: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/dump_ref_fasta/test
128: Test timeout computed to be: 1500
128: dump-ref-fasta : 3.2.1
 67/426 Test #128: dump-ref-fasta-1.2-V ...................................   Passed    0.07 sec
test 129
        Start 129: dump-ref-fasta-1.3-v

129: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/dump_ref_fasta/test/execandgrep.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/dump-ref-fasta -v" "3.2.1"
129: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/dump_ref_fasta/test
129: Test timeout computed to be: 1500
129: dump-ref-fasta : 3.2.1
 68/426 Test #129: dump-ref-fasta-1.3-v ...................................   Passed    0.07 sec
test 130
        Start 130: dump-ref-fasta-1.4-version

130: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/dump_ref_fasta/test/execandgrep.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/dump-ref-fasta --version" "3.2.1"
130: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/dump_ref_fasta/test
130: Test timeout computed to be: 1500
130: dump-ref-fasta : 3.2.1
 69/426 Test #130: dump-ref-fasta-1.4-version .............................   Passed    0.07 sec
test 138
        Start 138: PileupStats-Version

138: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats -V |
        grep -q `head -n 1 /build/reproducible-path/sra-sdk-3.2.1+dfsg/shared/toolkit.vers`"
138: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats/test
138: Test timeout computed to be: 1500
 70/426 Test #138: PileupStats-Version ....................................   Passed    0.05 sec
test 139
        Start 139: PileupStats-Help

139: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats -h | grep -q Usage"
139: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats/test
139: Test timeout computed to be: 1500
 71/426 Test #139: PileupStats-Help .......................................   Passed    0.04 sec
test 140
        Start 140: PileupStats-NoArgs

140: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats; if [ $? == 0 ] ; then exit 1; fi;"
140: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats/test
140: Test timeout computed to be: 1500
140: 
140: Usage:
140:   pileup-stats [options] <accession>
140: 
140: Options:
140:   -o|--output-file                 file for output
140:                                    (default pipe to stdout)
140:   -r|--remote-db                   name of remote database to create
140:                                    (default <accession>.pileup_stat)
140:   -x|--depth-cutoff                cutoff for depth <= value (default 1)
140:   -e|--event-cutoff                cutoff for number of events > value (default 1)
140:   -p|--num-significant-bits        number of significant bits for depth and counts to store (default 4)
140:   -a|--align-category              the types of alignments to pile up:
140:                                    { primary, secondary, all } (default primary)
140:   --buffer-size bytes              size of output pipe buffer - default 32K bytes
140:   -U|--unpack-integer              don't pack integers in output pipe - uses more bandwidth
140:   -h|--help                        output brief explanation of the program
140:   -v|--verbose                     increase the verbosity of the program.
140:   -V|--version                     display the version of the program then quit.
140:                                    use multiple times for more verbosity.
140:   --log-stderr                     log via stderr rather than general-writer API (default - general-writer API)
140: 
140: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats : 3.2.1
140: 
140: /usr/bin/sh: 1: [: 3: unexpected operator
 72/426 Test #140: PileupStats-NoArgs .....................................   Passed    0.03 sec
test 141
        Start 141: PileupStats-IgnoreArgs-L

141: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats -L 1; if [ $? == 0 ] ; then exit 1; fi;"
141: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats/test
141: Test timeout computed to be: 1500
141: 
141: Usage:
141:   pileup-stats [options] <accession>
141: 
141: Options:
141:   -o|--output-file                 file for output
141:                                    (default pipe to stdout)
141:   -r|--remote-db                   name of remote database to create
141:                                    (default <accession>.pileup_stat)
141:   -x|--depth-cutoff                cutoff for depth <= value (default 1)
141:   -e|--event-cutoff                cutoff for number of events > value (default 1)
141:   -p|--num-significant-bits        number of significant bits for depth and counts to store (default 4)
141:   -a|--align-category              the types of alignments to pile up:
141:                                    { primary, secondary, all } (default primary)
141:   --buffer-size bytes              size of output pipe buffer - default 32K bytes
141:   -U|--unpack-integer              don't pack integers in output pipe - uses more bandwidth
141:   -h|--help                        output brief explanation of the program
141:   -v|--verbose                     increase the verbosity of the program.
141:   -V|--version                     display the version of the program then quit.
141:                                    use multiple times for more verbosity.
141:   --log-stderr                     log via stderr rather than general-writer API (default - general-writer API)
141: 
141: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats : 3.2.1
141: 
141: /usr/bin/sh: 1: [: 3: unexpected operator
 73/426 Test #141: PileupStats-IgnoreArgs-L ...............................   Passed    0.03 sec
test 142
        Start 142: PileupStats-IgnoreArgs-z

142: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats -z ignore.txt; if [ $? == 0 ] ; then exit 1; fi;"
142: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats/test
142: Test timeout computed to be: 1500
142: 
142: Usage:
142:   pileup-stats [options] <accession>
142: 
142: Options:
142:   -o|--output-file                 file for output
142:                                    (default pipe to stdout)
142:   -r|--remote-db                   name of remote database to create
142:                                    (default <accession>.pileup_stat)
142:   -x|--depth-cutoff                cutoff for depth <= value (default 1)
142:   -e|--event-cutoff                cutoff for number of events > value (default 1)
142:   -p|--num-significant-bits        number of significant bits for depth and counts to store (default 4)
142:   -a|--align-category              the types of alignments to pile up:
142:                                    { primary, secondary, all } (default primary)
142:   --buffer-size bytes              size of output pipe buffer - default 32K bytes
142:   -U|--unpack-integer              don't pack integers in output pipe - uses more bandwidth
142:   -h|--help                        output brief explanation of the program
142:   -v|--verbose                     increase the verbosity of the program.
142:   -V|--version                     display the version of the program then quit.
142:                                    use multiple times for more verbosity.
142:   --log-stderr                     log via stderr rather than general-writer API (default - general-writer API)
142: 
142: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats : 3.2.1
142: 
142: /usr/bin/sh: 1: [: 3: unexpected operator
 74/426 Test #142: PileupStats-IgnoreArgs-z ...............................   Passed    0.02 sec
test 143
        Start 143: PileupStats-IgnoreArgs-loglevel

143: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats --log-level 1; if [ $? == 0 ] ; then exit 1; fi;"
143: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats/test
143: Test timeout computed to be: 1500
143: 
143: Usage:
143:   pileup-stats [options] <accession>
143: 
143: Options:
143:   -o|--output-file                 file for output
143:                                    (default pipe to stdout)
143:   -r|--remote-db                   name of remote database to create
143:                                    (default <accession>.pileup_stat)
143:   -x|--depth-cutoff                cutoff for depth <= value (default 1)
143:   -e|--event-cutoff                cutoff for number of events > value (default 1)
143:   -p|--num-significant-bits        number of significant bits for depth and counts to store (default 4)
143:   -a|--align-category              the types of alignments to pile up:
143:                                    { primary, secondary, all } (default primary)
143:   --buffer-size bytes              size of output pipe buffer - default 32K bytes
143:   -U|--unpack-integer              don't pack integers in output pipe - uses more bandwidth
143:   -h|--help                        output brief explanation of the program
143:   -v|--verbose                     increase the verbosity of the program.
143:   -V|--version                     display the version of the program then quit.
143:                                    use multiple times for more verbosity.
143:   --log-stderr                     log via stderr rather than general-writer API (default - general-writer API)
143: 
143: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats : 3.2.1
143: 
143: /usr/bin/sh: 1: [: 3: unexpected operator
 75/426 Test #143: PileupStats-IgnoreArgs-loglevel ........................   Passed    0.03 sec
test 144
        Start 144: PileupStats-IgnoreArgs-xmllog

144: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats --xml-log ignore.txt; if [ $? == 0 ] ; then exit 1; fi;"
144: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats/test
144: Test timeout computed to be: 1500
144: 
144: Usage:
144:   pileup-stats [options] <accession>
144: 
144: Options:
144:   -o|--output-file                 file for output
144:                                    (default pipe to stdout)
144:   -r|--remote-db                   name of remote database to create
144:                                    (default <accession>.pileup_stat)
144:   -x|--depth-cutoff                cutoff for depth <= value (default 1)
144:   -e|--event-cutoff                cutoff for number of events > value (default 1)
144:   -p|--num-significant-bits        number of significant bits for depth and counts to store (default 4)
144:   -a|--align-category              the types of alignments to pile up:
144:                                    { primary, secondary, all } (default primary)
144:   --buffer-size bytes              size of output pipe buffer - default 32K bytes
144:   -U|--unpack-integer              don't pack integers in output pipe - uses more bandwidth
144:   -h|--help                        output brief explanation of the program
144:   -v|--verbose                     increase the verbosity of the program.
144:   -V|--version                     display the version of the program then quit.
144:                                    use multiple times for more verbosity.
144:   --log-stderr                     log via stderr rather than general-writer API (default - general-writer API)
144: 
144: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats : 3.2.1
144: 
144: /usr/bin/sh: 1: [: 3: unexpected operator
 76/426 Test #144: PileupStats-IgnoreArgs-xmllog ..........................   Passed    0.04 sec
test 145
        Start 145: PileupStats-IgnoreArgs-xmllogfd

145: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats --xml-log-fd ignore.txt; if [ $? == 0 ] ; then exit 1; fi;"
145: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/tools/test-tools/pileup-stats/test
145: Test timeout computed to be: 1500
145: 
145: Usage:
145:   pileup-stats [options] <accession>
145: 
145: Options:
145:   -o|--output-file                 file for output
145:                                    (default pipe to stdout)
145:   -r|--remote-db                   name of remote database to create
145:                                    (default <accession>.pileup_stat)
145:   -x|--depth-cutoff                cutoff for depth <= value (default 1)
145:   -e|--event-cutoff                cutoff for number of events > value (default 1)
145:   -p|--num-significant-bits        number of significant bits for depth and counts to store (default 4)
145:   -a|--align-category              the types of alignments to pile up:
145:                                    { primary, secondary, all } (default primary)
145:   --buffer-size bytes              size of output pipe buffer - default 32K bytes
145:   -U|--unpack-integer              don't pack integers in output pipe - uses more bandwidth
145:   -h|--help                        output brief explanation of the program
145:   -v|--verbose                     increase the verbosity of the program.
145:   -V|--version                     display the version of the program then quit.
145:                                    use multiple times for more verbosity.
145:   --log-stderr                     log via stderr rather than general-writer API (default - general-writer API)
145: 
145: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/pileup-stats : 3.2.1
145: 
145: /usr/bin/sh: 1: [: 3: unexpected operator
 77/426 Test #145: PileupStats-IgnoreArgs-xmllogfd ........................   Passed    0.02 sec
test 147
        Start 147: Test_VDB

147: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_VDB
147: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/vdb
147: Test timeout computed to be: 1500
147: Running 38 test cases...
147: Error_RcToString (0 s)
147: Error_RcToString_English (0 s)
147: Manager_Construction (0 s)
147: RC 1426393646 thrown by ./libs/inc/vdb.hpp:259
147: Manager_Schema_Bad (0 s)
147: Manager_Schema_Good (0 s)
147: Manager_Schema_Include (0 s)
147: Manager_SchemaFromFile (0 s)
147: Manager_SchemaFromFile_Bad (0 s)
147: RC 2615477144 thrown by ./libs/inc/vdb.hpp:809
147: Manager_Database_Bad (0 s)
147: Manager_OpenDatabase_Good (0 s)
147: RC 1273301772 thrown by ./libs/inc/vdb.hpp:816
147: Manager_OpenTable_Bad (0 s)
147: Manager_OpenTable_Good (0 s)
147: Manager_PathType_Table (0 s)
147: Manager_PathType_Database (0 s)
147: Manager_PathType_Invalid (0 s)
147: RC 807538648 thrown by ./libs/inc/vdb.hpp:732
147: Database_Table_Bad (0 s)
147: Database_Table_Good (0 s)
147: Database_hasTable_Yes (0 s)
147: Database_hasTable_No (0 s)
147: Table_Default (0 s)
147: Table_Assign (0 s)
147: RC 1367638680 thrown by ./libs/inc/vdb.hpp:645
147: Table_ReadCursor1_BadColumn (0 s)
147: Table_ReadCursor1 (0 s)
147: RC 1367638680 thrown by ./libs/inc/vdb.hpp:673
147: Table_ReadCursor2_BadColumn (0 s)
147: Table_ReadCursor2 (0 s)
147: Table_PhysicaColumns (0 s)
147: Cursor_Columns (0 s)
147: Cursor_RowRange (0 s)
147: Cursor_ReadOne (0 s)
147: Cursor_ReadN (0 s)
147: Cursor_ForEach (0 s)
147: Cursor_ForEachWithFilter (0 s)
147: Cursor_IsStaticColumn_True (0 s)
147: Cursor_IsStaticColumn_False (0 s)
147: RawData_asVector_badCast (0 s)
147: RawData_asVector (0 s)
147: RawData_value_badCast (0 s)
147: RawData_value (0 s)
147: 
147: *** No errors detected (1 s total)
 78/426 Test #147: Test_VDB ...............................................   Passed    1.16 sec
test 148
        Start 148: Test_WVDB

148: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_WVDB
148: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/vdb
148: Test timeout computed to be: 1500
148: Running 2 test cases...
148: PlatformNames (1 s)
148: ProductionSchema (0 s)
148: 
148: *** No errors detected (1 s total)
 79/426 Test #148: Test_WVDB ..............................................   Passed    1.14 sec
test 149
        Start 149: Test_SraSchema_Unit

149: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_SraSchema_Unit
149: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/schema
149: Test timeout computed to be: 1500
149: Running 1 test case...
149: UseSraFunction (0 s)
149: 
149: *** No errors detected (0 s total)
 80/426 Test #149: Test_SraSchema_Unit ....................................   Passed    0.05 sec
test 150
        Start 150: Test_SraSchema_454_db

150: Test command: /usr/bin/python3 "test_VDB-5250.py"
150: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/schema
150: Environment variables: 
150:  VDB_LIBRARY_PATH=/usr/lib/aarch64-linux-gnu
150:  VDB_SRCDIR=/usr/include/ncbi-vdb/..
150: Test timeout computed to be: 1500
 81/426 Test #150: Test_SraSchema_454_db ..................................   Passed    0.14 sec
test 151
        Start 151: Test_SraSchema_IonTorrent_db

151: Test command: /usr/bin/python3 "test_VDB-5251.py"
151: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/schema
151: Environment variables: 
151:  VDB_LIBRARY_PATH=/usr/lib/aarch64-linux-gnu
151:  VDB_SRCDIR=/usr/include/ncbi-vdb/..
151: Test timeout computed to be: 1500
 82/426 Test #151: Test_SraSchema_IonTorrent_db ...........................   Passed    0.15 sec
test 152
        Start 152: Test_SEARCH_agrep

152: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_SEARCH_agrep
152: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/search
152: Test timeout computed to be: 1500
152: Running 39 test cases...
152: AgrepDPTest (0 s)
152: AgrepWumanberTest (0 s)
152: AgrepMyersTest (0 s)
152: AgrepMyersUnltdTest (0 s)
152: SearchCompare test is currently OFF
152: SearchCompare (0 s)
152: TestCaseAgrep test is currently OFF
152: TestCaseAgrep (0 s)
152: DumbGrep_Crash (0 s)
152: BoyerMooreGrep_Crash (0 s)
152: AhoGrep_Crash (0 s)
152: SmithWatermanTest (0 s)
152: RefVariation_crash (0 s)
152: RefVariation_bounds_N (0 s)
152: Nucstrstr_NonPositional_NotFound (0 s)
152: Nucstrstr_NonPositional_Found_AtStart (0 s)
152: Nucstrstr_NonPositional_Found_InMiddle (0 s)
152: Nucstrstr_Positional_NoExpr_NotFound (0 s)
152: Nucstrstr_Positional_NoExpr_Found_AtStart (0 s)
152: Nucstrstr_Positional_NoExpr_Found_InMiddle (0 s)
152: Nucstrstr_Positional_Not_False (0 s)
152: Nucstrstr_Positional_Not_True (0 s)
152: Nucstrstr_Positional_Caret_Found (0 s)
152: Nucstrstr_Positional_Caret_NotFound (0 s)
152: Nucstrstr_Positional_Dollar_Found (0 s)
152: Nucstrstr_Positional_Dollar_NotFound (0 s)
152: Nucstrstr_Positional_OR_Found_1 (0 s)
152: Nucstrstr_Positional_OR_Found_2 (0 s)
152: Nucstrstr_Positional_OR_Found_FirstMatchPositionReported (0 s)
152: Nucstrstr_Positional_OR_NotFound (0 s)
152: Nucstrstr_Positional_AND_Found_LastMatchPositionReported (0 s)
152: Nucstrstr_Positional_AND_NotFound (0 s)
152: Nucstrstr_Positional_AND_OR_Found_1 (0 s)
152: Nucstrstr_Positional_AND_OR_Found_2 (0 s)
152: Nucstrstr_Positional_AND_OR_Found_3 (0 s)
152: Nucstrstr_Positional_AND_OR_NOT_NotFound (0 s)
152: Nucstrstr_Positional_AND_OR_NOT_Found (0 s)
152: Nucstrstr_Positional_Error (0 s)
152: Nucstrstr_NonPositional_4NA_NotFound (0 s)
152: Nucstrstr_NonPositional_4NA_Found_AtStart (0 s)
152: Nucstrstr_NonPositional_4NA_Found_InMiddle (0 s)
152: 
152: *** No errors detected (0 s total)
 83/426 Test #152: Test_SEARCH_agrep ......................................   Passed    0.01 sec
test 153
        Start 153: Test_NgsJava_lib_load

153: Test command: /usr/bin/java "-cp" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib/test-ngs-java.jar:/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/lib/ngs-java.jar:/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/ngs/ngs-java/junit-4.11.jar" "-Dvdb.System.loadLibrary=1" "-Dvdb.log=FINEST" "org.junit.runner.JUnitCore" "gov.nih.nlm.ncbi.ngs.ngs_test_lib_load"
153: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/ngs/ngs-java
153: Test timeout computed to be: 1500
153: JUnit version 4.11
153: .........
153: Time: 0.098
153: 
153: OK (9 tests)
153: 
 84/426 Test #153: Test_NgsJava_lib_load ..................................   Passed    0.33 sec
test 157
        Start 157: Test_Align_Info_H

157: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/align-info "-h"
157: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/align-info
157: Test timeout computed to be: 1500
157: Usage:
157:   align-info [options] <db-path>
157: 
157: Summary:
157:   Print database alignment information
157: 
157: Parameters:
157:   db-path                          Path to the database
157: 
157: Options:
157:   -a|--all                         print all information 
157:   -r|--ref                         print refseq information [default] 
157:   -b|--bam                         print bam header (if present) 
157:   -Q|--qual                        print quality statistics (if present) 
157:   -H|--headers                     print headers for output blocks 
157:   --ngc <path>                     path to ngc file 
157: 
157:   -h|--help                        Output brief explanation for the program. 
157:   -V|--version                     Display the version of the program then 
157:                                    quit. 
157:   -L|--log-level <level>           Logging level as number or enum string. One 
157:                                    of (fatal|sys|int|err|warn|info|debug) or 
157:                                    (0-6) Current/default is warn. 
157:   -v|--verbose                     Increase the verbosity of the program 
157:                                    status messages. Use multiple times for more 
157:                                    verbosity. Negates quiet. 
157:   -q|--quiet                       Turn off all status messages for the 
157:                                    program. Negated by verbose. 
157:   --option-file <file>             Read more options and parameters from the 
157:                                    file. 
157: 
157: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/align-info : 3.2.1
157: 
 85/426 Test #157: Test_Align_Info_H ......................................   Passed    0.01 sec
test 159
        Start 159: Test_Drivertool_BuildVersion

159: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Drivertool_BuildVersion
159: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool
159: Test timeout computed to be: 1500
159: Test_Version passed.
 86/426 Test #159: Test_Drivertool_BuildVersion ...........................   Passed    0.00 sec
test 160
        Start 160: Test_Drivertool_FilePath

160: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Drivertool_FilePath
160: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool
160: Test timeout computed to be: 1500
160: Running 29 test cases...
160: DefaultConstruct (0 s)
160: Construct_Cstring (0 s)
160: Construct_String (0 s)
160: CopyConstruct_Empty (0 s)
160: CopyConstruct (0 s)
160: Assign_Empty (0 s)
160: Assign (0 s)
160: Copy (0 s)
160: Split (0 s)
160: BaseName (0 s)
160: Append (0 s)
160: RemoveSuffix_0 (0 s)
160: RemoveSuffix (0 s)
160: RemoveSuffix_Ext (0 s)
160: RemoveSuffix_Oversized (0 s)
160: SimpleName (0 s)
160: CWD (0 s)
160: Exists (0 s)
160: CWD_Append (0 s)
160: Exists_Static (0 s)
160: Readable (0 s)
160: IsSame_Directory (0 s)
160: NotIsSame_Directory (0 s)
160: IsSame_File (0 s)
160: NotIsSame_File (0 s)
160: ChangeDirectoryToParentAndBackAgain (0 s)
160: ChangeDirectoryToFile (0 s)
160: Current_Executable (0 s)
160: Executable_Yes (0 s)
160: 
160: *** No errors detected (0 s total)
 87/426 Test #160: Test_Drivertool_FilePath ...............................   Passed    0.01 sec
test 161
        Start 161: Test_Drivertool_CommandLine

161: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Drivertool_CommandLine
161: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool
161: Test timeout computed to be: 1500
161: Test_CommandLine passed.
 88/426 Test #161: Test_Drivertool_CommandLine ............................   Passed    0.00 sec
test 162
        Start 162: Test_Drivertool_JsonParsing

162: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Drivertool_JsonParsing
162: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool
162: Test timeout computed to be: 1500
 89/426 Test #162: Test_Drivertool_JsonParsing ............................   Passed    0.01 sec
test 163
        Start 163: Test_Drivertool_SDLResponse

163: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Drivertool_SDLResponse
163: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool
163: Test timeout computed to be: 1500
 90/426 Test #163: Test_Drivertool_SDLResponse ............................   Passed    0.00 sec
test 164
        Start 164: Test_Drivertool_Accession

164: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Drivertool_Accession
164: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool
164: Test timeout computed to be: 1500
 91/426 Test #164: Test_Drivertool_Accession ..............................   Passed    0.00 sec
test 165
        Start 165: Test_Drivertool_UUID

165: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Drivertool_UUID
165: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool
165: Test timeout computed to be: 1500
 92/426 Test #165: Test_Drivertool_UUID ...................................   Passed    0.20 sec
test 166
        Start 166: Test_Drivertool_RunSource

166: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Drivertool_RunSource
166: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool
166: Test timeout computed to be: 1500
166: Running 18 test cases...
166: CopmmandLine_GetToolPath (0 s)
166: CommandLine_Defaults (0 s)
166: UnknownTool (0 s)
166: URL_parameter (0 s)
166: ConstructNoSDL (0 s)
166: ConstructSDL_false (0 s)
166: ConstructSDL_true (0 s)
166: ConstructSDL_badSDL (0 s)
166: ConstructSDL_noResults (0 s)
166: ConstructSDL_oneResult (0 s)
166: ConstructSDL_multipleFiles (0 s)
166: ConstructSDL_multipleLocations (0 s)
166: Query SRR000001: Error 400 no data
166: ConstructSDL_status_400 (0 s)
166: ConstructSDL_status_404 (0 s)
166: No usable source for SRR000001 was found.
166: SRR000001 might be available in a different cloud provider or region.
166: ConstructSDL_pileupIgnored (0 s)
166: No usable source for SRR000001 was found.
166: SRR000001 might be available in a different cloud provider or region.
166: ConstructSDL_noObject_Ignored (0 s)
166: No usable source for SRR000001 was found.
166: SRR000001 might be available in a different cloud provider or region.
166: ConstructSDL_noQuality_Ignored (0 s)
166: No usable source for SRR000001 was found.
166: SRR000001 might be available in a different cloud provider or region.
166: ConstructSDL_Encrypted_NoNGC_Skipped (0 s)
166: 
166: *** No errors detected (0 s total)
 93/426 Test #166: Test_Drivertool_RunSource ..............................   Passed    0.01 sec
test 167
        Start 167: Test_Drivertool_ToolArgs

167: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Drivertool_ToolArgs
167: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/driver-tool
167: Test timeout computed to be: 1500
167: Running 1 test case...
167: ParseArgs (0 s)
167: 
167: *** No errors detected (0 s total)
 94/426 Test #167: Test_Drivertool_ToolArgs ...............................   Passed    0.01 sec
test 168
        Start 168: Test_FasterqDump_Help

168: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/fasterq-dump "-h"
168: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/fasterq-dump
168: Test timeout computed to be: 1500
168: 
168: Usage:
168:   fasterq-dump <path> [options]
168:   fasterq-dump <accession> [options]
168: 
168: Options:
168:   -F|--format                      format (special, fastq, default=fastq) 
168:   -o|--outfile                     output-file 
168:   -O|--outdir                      output-dir 
168:   -b|--bufsize                     size of file-buffer dflt=1MB 
168:   -c|--curcache                    size of cursor-cache dflt=10MB 
168:   -m|--mem                         memory limit for sorting dflt=100MB 
168:   -t|--temp                        where to put temp. files dflt=curr dir 
168:   -e|--threads                     how many thread dflt=6 
168:   -p|--progress                    show progress 
168:   -x|--details                     print details 
168:   -s|--split-spot                  split spots into reads 
168:   -S|--split-files                 write reads into different files 
168:   -3|--split-3                     writes single reads in special file 
168:   --concatenate-reads              writes whole spots into one file 
168:   -Z|--stdout                      print output to stdout 
168:   -f|--force                       force to overwrite existing file(s) 
168:   --skip-technical                 skip technical reads 
168:   --include-technical              include technical reads 
168:   -M|--min-read-len                filter by sequence-len 
168:   --table                          which seq-table to use in case of pacbio 
168:   -B|--bases                       filter by bases 
168:   -A|--append                      append to output-file 
168:   --fasta                          produce FASTA output 
168:   --fasta-unsorted                 produce FASTA output, unsorted 
168:   --fasta-ref-tbl                  produce FASTA output from REFERENCE tbl 
168:   --fasta-concat-all               concatenate all rows and produce FASTA 
168:   --internal-ref                   extract only internal REFERENCEs 
168:   --external-ref                   extract only external REFERENCEs 
168:   --ref-name                       extract only these REFERENCEs 
168:   --ref-report                     enumerate references 
168:   --use-name                       print name instead of seq-id 
168:   --seq-defline                    custom defline for sequence:  $ac=accession, 
168:                                    $sn=spot-name,  $sg=spot-group, $si=spot-id,  
168:                                    $ri=read-id, $rl=read-length 
168:   --qual-defline                   custom defline for qualities:  same as 
168:                                    seq-defline 
168:   -U|--only-unaligned              process only unaligned reads 
168:   -a|--only-aligned                process only aligned reads 
168:   --disk-limit                     explicitly set disk-limit 
168:   --disk-limit-tmp                 explicitly set disk-limit for temp. files 
168:   --size-check                     switch to control: on=perform size-check 
168:                                    (default),  off=do not perform size-check,  
168:                                    only=perform size-check only 
168:   --ngc <PATH>                     PATH to ngc file 
168: 
168:   -h|--help                        Output brief explanation for the program. 
168:   -V|--version                     Display the version of the program then 
168:                                    quit. 
168:   -L|--log-level <level>           Logging level as number or enum string. One 
168:                                    of (fatal|sys|int|err|warn|info|debug) or 
168:                                    (0-6) Current/default is warn. 
168:   -v|--verbose                     Increase the verbosity of the program 
168:                                    status messages. Use multiple times for more 
168:                                    verbosity. Negates quiet. 
168:   -q|--quiet                       Turn off all status messages for the 
168:                                    program. Negated by verbose. 
168:   --option-file <file>             Read more options and parameters from the 
168:                                    file. 
168: for more information visit:
168:    https://github.com/ncbi/sra-tools/wiki/HowTo:-fasterq-dump
168:    https://github.com/ncbi/sra-tools/wiki/08.-prefetch-and-fasterq-dump
168: 
168: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/fasterq-dump : 3.2.1
168: 
 95/426 Test #168: Test_FasterqDump_Help ..................................   Passed    0.01 sec
test 169
        Start 169: Test_FasterqDump_NotZeroWithoutParameters

169: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/fasterq-dump
169: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/fasterq-dump
169: Test timeout computed to be: 1500
169: 
169: Usage:
169:   fasterq-dump <path> [options]
169:   fasterq-dump <accession> [options]
169: 
169: Options:
169:   -F|--format                      format (special, fastq, default=fastq) 
169:   -o|--outfile                     output-file 
169:   -O|--outdir                      output-dir 
169:   -b|--bufsize                     size of file-buffer dflt=1MB 
169:   -c|--curcache                    size of cursor-cache dflt=10MB 
169:   -m|--mem                         memory limit for sorting dflt=100MB 
169:   -t|--temp                        where to put temp. files dflt=curr dir 
169:   -e|--threads                     how many thread dflt=6 
169:   -p|--progress                    show progress 
169:   -x|--details                     print details 
169:   -s|--split-spot                  split spots into reads 
169:   -S|--split-files                 write reads into different files 
169:   -3|--split-3                     writes single reads in special file 
169:   --concatenate-reads              writes whole spots into one file 
169:   -Z|--stdout                      print output to stdout 
169:   -f|--force                       force to overwrite existing file(s) 
169:   --skip-technical                 skip technical reads 
169:   --include-technical              include technical reads 
169:   -M|--min-read-len                filter by sequence-len 
169:   --table                          which seq-table to use in case of pacbio 
169:   -B|--bases                       filter by bases 
169:   -A|--append                      append to output-file 
169:   --fasta                          produce FASTA output 
169:   --fasta-unsorted                 produce FASTA output, unsorted 
169:   --fasta-ref-tbl                  produce FASTA output from REFERENCE tbl 
169:   --fasta-concat-all               concatenate all rows and produce FASTA 
169:   --internal-ref                   extract only internal REFERENCEs 
169:   --external-ref                   extract only external REFERENCEs 
169:   --ref-name                       extract only these REFERENCEs 
169:   --ref-report                     enumerate references 
169:   --use-name                       print name instead of seq-id 
169:   --seq-defline                    custom defline for sequence:  $ac=accession, 
169:                                    $sn=spot-name,  $sg=spot-group, $si=spot-id,  
169:                                    $ri=read-id, $rl=read-length 
169:   --qual-defline                   custom defline for qualities:  same as 
169:                                    seq-defline 
169:   -U|--only-unaligned              process only unaligned reads 
169:   -a|--only-aligned                process only aligned reads 
169:   --disk-limit                     explicitly set disk-limit 
169:   --disk-limit-tmp                 explicitly set disk-limit for temp. files 
169:   --size-check                     switch to control: on=perform size-check 
169:                                    (default),  off=do not perform size-check,  
169:                                    only=perform size-check only 
169:   --ngc <PATH>                     PATH to ngc file 
169: 
169:   -h|--help                        Output brief explanation for the program. 
169:   -V|--version                     Display the version of the program then 
169:                                    quit. 
169:   -L|--log-level <level>           Logging level as number or enum string. One 
169:                                    of (fatal|sys|int|err|warn|info|debug) or 
169:                                    (0-6) Current/default is warn. 
169:   -v|--verbose                     Increase the verbosity of the program 
169:                                    status messages. Use multiple times for more 
169:                                    verbosity. Negates quiet. 
169:   -q|--quiet                       Turn off all status messages for the 
169:                                    program. Negated by verbose. 
169:   --option-file <file>             Read more options and parameters from the 
169:                                    file. 
169: for more information visit:
169:    https://github.com/ncbi/sra-tools/wiki/HowTo:-fasterq-dump
169:    https://github.com/ncbi/sra-tools/wiki/08.-prefetch-and-fasterq-dump
169: 
169: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/fasterq-dump : 3.2.1
169: 
 96/426 Test #169: Test_FasterqDump_NotZeroWithoutParameters ..............   Passed    0.01 sec
test 171
        Start 171: Test_FasterDump_Fasta_unsorted_flat_tbl_read_id

171: Test command: /usr/bin/sh "test_for_read_id_flat.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin"
171: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/fasterq-dump
171: Test timeout computed to be: 1500
171: spots read      : 10
171: reads read      : 20
171: reads written   : 20
171: READ_ID1: 10
171: READ_ID2: 10
171: success testing read-id for --fasta-unsorted mode on flat table
 97/426 Test #171: Test_FasterDump_Fasta_unsorted_flat_tbl_read_id ........   Passed    0.18 sec
test 172
        Start 172: Test_FasterDump_Fasta_unsorted_cSRA_read_id

172: Test command: /usr/bin/cmake "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/fasterq-dump" "sh" "-c" "echo 'vdb/schema/paths = "/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema:/usr/include/ncbi-vdb"' > tmp.kfg; ./test_for_read_id_cSRA.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin"
172: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/fasterq-dump
172: Test timeout computed to be: 1500
172: spots read      : 10
172: reads read      : 20
172: reads written   : 20
172: READ_ID1: 10
172: READ_ID2: 10
172: success testing read-id for --fasta-unsorted mode on cSRA table
 98/426 Test #172: Test_FasterDump_Fasta_unsorted_cSRA_read_id ............   Passed    0.44 sec
test 173
        Start 173: Test_Tiny_cSRA

173: Test command: /usr/bin/cmake "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/fasterq-dump" "sh" "-c" "echo 'vdb/schema/paths = "/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema:/usr/include/ncbi-vdb"' > tmp.kfg; ./tiny_csra.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin"
173: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/fasterq-dump
173: Test timeout computed to be: 1500
173: ./tiny_csra.sh: 17: [[: not found
173: ./tiny_csra.sh: 26: [[: not found
173: ./tiny_csra.sh: 32: [[: not found
173: ./tiny_csra.sh: 38: [[: not found
173: -e 
173: testing /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/fasterq-dump on tiny cSRA-accession
173: ./tiny_csra.sh: 46: [[: not found
173: ./tiny_csra.sh: 65: [[: not found
173: ./tiny_csra.sh: 70: [[: not found
173: ./tiny_csra.sh: 75: [[: not found
173: ./tiny_csra.sh: 86: [[: not found
173: ./tiny_csra.sh: 99: [[: not found
173: spots read      : 3
173: reads read      : 3
173: reads written   : 3
173: ./tiny_csra.sh: 111: [[: not found
 99/426 Test #173: Test_Tiny_cSRA .........................................   Passed    0.97 sec
test 182
        Start 182: Test_Prefetch_In_PATH

182: Test command: /usr/bin/cmake "-E" "env" "PATH=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin:/bin" "sh" "-c" "prefetch -h > /dev/null"
182: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test/external/prefetch
182: Test timeout computed to be: 1500
100/426 Test #182: Test_Prefetch_In_PATH ..................................   Passed    0.06 sec
test 190
        Start 190: SamDumpTestSetup

190: Test command: /usr/bin/sh "-c" "echo 'vdb/schema/paths = "/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema:/usr/include/ncbi-vdb"
/LIBS/GUID="8test002-6ab7-41b2-bfd0-sam-dump-test"' > tmp.kfg"
190: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sam-dump
190: Test timeout computed to be: 1500
101/426 Test #190: SamDumpTestSetup .......................................   Passed    0.01 sec
test 191
        Start 191: Test_sam_dump_verify_omit

191: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sam-dump" "./verify_omit_qual.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin"
191: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sam-dump
191: Test timeout computed to be: 1500
102/426 Test #191: Test_sam_dump_verify_omit ..............................   Passed    1.11 sec
test 192
        Start 192: Test_sam_dump_star_quality

192: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sam-dump" "./print_star_on_missing_qual.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin"
192: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sam-dump
192: Test timeout computed to be: 1500
103/426 Test #192: Test_sam_dump_star_quality .............................   Passed    0.69 sec
test 193
        Start 193: Test_Srapath_Check_exit_code

193: Test command: /usr/bin/cmake "-E" "env" "VDB_CONFIG=../.." "/usr/bin/python3" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/build/check-exit-code.py" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/srapath"
193: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/srapath
193: Test timeout computed to be: 1500
193: [check-exit-code.py] test passed for [/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/srapath]
104/426 Test #193: Test_Srapath_Check_exit_code ...........................   Passed    0.06 sec
test 195
        Start 195: Test_SraPileup_Check_exit_code

195: Test command: /usr/bin/cmake "-E" "env" "VDB_CONFIG=.." "/usr/bin/python3" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/build/check-exit-code.py" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-pileup"
195: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-pileup
195: Test timeout computed to be: 1500
195: WARNING[TEST1] help message is in 'STDOUT'
195: [check-exit-code.py] test passed for [/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-pileup]
105/426 Test #195: Test_SraPileup_Check_exit_code .........................   Passed    0.10 sec
test 200
        Start 200: Test_VDB_Config_model

200: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/vdb-config/model.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/test-vdb-config-model"
200: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/vdb-config
200: Test timeout computed to be: 1500
200: testing /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/test-vdb-config-model
200: Running 11 test cases...
200: get_config_changed (0 s)
200: prefetch_download_to_cache (0 s)
200: user_accept_aws_charges (0 s)
200: user_accept_gcp_charges (0 s)
200: ./test/external/vdb-config/test-vdb-config-model.cpp:92: fatal error in "temp_cache_location": critical check string ( "path" ) == m . get_temp_cache_location() failed [path != /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/vdb-config/path]
200: temp_cache_location (0 s)
200: gcp_credential_file_location (0 s)
200: aws_credential_file_location (0 s)
200: aws_profile (0 s)
200: noCommit (0 s)
200: Commit (0 s)
200: Reload (0 s)
200: 
200: *** 1 failure detected in test suite "VdbConfStridesModelTestSuite"
200: VDB Copy model test is finished
106/426 Test #200: Test_VDB_Config_model ..................................   Passed    0.05 sec
test 201
        Start 201: Test_VDB_Config

201: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/vdb-config/test-vdb-config.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin"
201: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/vdb-config
201: Test timeout computed to be: 1500
201: Testing /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-config... 
201: VDB config test is finished
107/426 Test #201: Test_VDB_Config ........................................   Passed    0.03 sec
test 202
        Start 202: Test_Vdb_dump_Check_exit_code

202: Test command: /usr/bin/cmake "-E" "env" "VDB_CONFIG=.." "/usr/bin/python3" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/build/check-exit-code.py" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump"
202: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/vdb-dump
202: Test timeout computed to be: 1500
202: WARNING[TEST1] help message is in 'STDOUT'
202: [check-exit-code.py] test passed for [/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump]
108/426 Test #202: Test_Vdb_dump_Check_exit_code ..........................   Passed    0.09 sec
test 203
        Start 203: Test_Vdb_dump_view-spec

203: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Vdb_dump_view-spec
203: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/vdb-dump
203: Test timeout computed to be: 1500
203: Running 21 test cases...
203: NullSelf (0 s)
203: NullSpec (0 s)
203: EmptySpec (0 s)
203: NullError (0 s)
203: ZeroSizeError (0 s)
203: MissingLeftAngle (0 s)
203: EmptyAngles (0 s)
203: OneParam (0 s)
203: ManyParams (0 s)
203: MissingComma (0 s)
203: MissingParam (0 s)
203: ExtraChars (0 s)
203: NestedViews (0 s)
203: ViewSpecOpen_NullSelf (0 s)
203: ViewSpecOpen_NullParam_Db (0 s)
203: ViewSpecOpen_NullParam_Schema (0 s)
203: ViewSpecOpen_NullParam_View (0 s)
203: ViewSpecOpen_WrongNumberOfParams (0 s)
203: ViewSpecOpen_ParamNotTable (0 s)
203: MakeCursor (0 s)
203: NestedView (0 s)
203: 
203: *** No errors detected (0 s total)
109/426 Test #203: Test_Vdb_dump_view-spec ................................   Passed    0.05 sec
test 206
        Start 206: Test_VdbValidate_Unit

206: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_VdbValidate_Unit
206: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/vdb-validate
206: Test timeout computed to be: 1500
206: Running 3 test cases...
206: is_sorted_empty (0 s)
206: is_sorted_sorted (0 s)
206: is_sorted_unsorted (0 s)
206: 
206: *** No errors detected (0 s total)
110/426 Test #206: Test_VdbValidate_Unit ..................................   Passed    0.01 sec
test 210
        Start 210: Test_Sra_Info_Help

210: Test command: /usr/bin/sh "-c" "ls /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info>/dev/null 2>&1 && /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info -h >actual/Test_Sra_Info_Help.stdout || echo no sra-info"
210: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info
210: Test timeout computed to be: 1500
111/426 Test #210: Test_Sra_Info_Help .....................................   Passed    0.01 sec
test 211
        Start 211: Test_Sra_Info_NoParam

211: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info/runfailtest.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info" "" "."
211: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info
211: Test timeout computed to be: 1500
211: running 
211: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info 1>./actual//stdout 2>./actual//stderr
112/426 Test #211: Test_Sra_Info_NoParam ..................................   Passed    0.04 sec
test 212
        Start 212: Test_Sra_Info_MultipleParams

212: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info/runfailtest.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info" "SRR000123 SRR0001234" "."
212: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info
212: Test timeout computed to be: 1500
212: running 
212: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info SRR000123 SRR0001234 1>./actual//stdout 2>./actual//stderr
113/426 Test #212: Test_Sra_Info_MultipleParams ...........................   Passed    0.04 sec
test 213
        Start 213: Test_Sra_Info_Limit_Negative

213: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info/runfailtest.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info" "--spot-layout DRR032985 --limit -1" "."
213: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info
213: Test timeout computed to be: 1500
213: running 
213: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info --spot-layout DRR032985 --limit -1 1>./actual//stdout 2>./actual//stderr
114/426 Test #213: Test_Sra_Info_Limit_Negative ...........................   Passed    0.04 sec
test 214
        Start 214: Test_Sra_Info_Limit_Zero

214: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info/runfailtest.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info" "--spot-layout DRR032985 --limit 0" "."
214: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info
214: Test timeout computed to be: 1500
214: running 
214: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info --spot-layout DRR032985 --limit 0 1>./actual//stdout 2>./actual//stderr
115/426 Test #214: Test_Sra_Info_Limit_Zero ...............................   Passed    0.04 sec
test 221
        Start 221: Test_Sra_Info_Platform_Format_CSV

221: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info -P ./input/MultiPlatform.sra -f csv" "." "4.1"
221: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info
221: Test timeout computed to be: 9000
221: running 4.1
221: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info -P ./input/MultiPlatform.sra -f csv 1>./actual/4.1/stdout 2>./actual/4.1/stderr
116/426 Test #221: Test_Sra_Info_Platform_Format_CSV ......................   Passed    0.12 sec
test 222
        Start 222: Test_Sra_Info_Platform_Format_XML

222: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info -P ./input/MultiPlatform.sra -f xml" "." "4.2"
222: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info
222: Test timeout computed to be: 9000
222: running 4.2
222: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info -P ./input/MultiPlatform.sra -f xml 1>./actual/4.2/stdout 2>./actual/4.2/stderr
117/426 Test #222: Test_Sra_Info_Platform_Format_XML ......................   Passed    0.12 sec
test 223
        Start 223: Test_Sra_Info_Platform_Format_Json

223: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info -P ./input/MultiPlatform.sra -f json" "." "4.3"
223: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info
223: Test timeout computed to be: 9000
223: running 4.3
223: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info -P ./input/MultiPlatform.sra -f json 1>./actual/4.3/stdout 2>./actual/4.3/stderr
118/426 Test #223: Test_Sra_Info_Platform_Format_Json .....................   Passed    0.12 sec
test 224
        Start 224: Test_Sra_Info_Platform_Format_Tab

224: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info -P ./input/MultiPlatform.sra -f tab" "." "4.4"
224: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info
224: Test timeout computed to be: 9000
224: running 4.4
224: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info -P ./input/MultiPlatform.sra -f tab 1>./actual/4.4/stdout 2>./actual/4.4/stderr
119/426 Test #224: Test_Sra_Info_Platform_Format_Tab ......................   Passed    0.12 sec
test 227
        Start 227: Test_Sra_Info_Quality_Physical

227: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info --quality ./input/MultiPlatform.sra" "." "6.1"
227: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info
227: Test timeout computed to be: 9000
227: running 6.1
227: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info --quality ./input/MultiPlatform.sra 1>./actual/6.1/stdout 2>./actual/6.1/stderr
120/426 Test #227: Test_Sra_Info_Quality_Physical .........................   Passed    0.12 sec
test 242
        Start 242: Test_Sra_Info_Schema_Default

242: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info --schema input/MultiPlatform.sra" "." "9.0"
242: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info
242: Test timeout computed to be: 9000
242: running 9.0
242: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info --schema input/MultiPlatform.sra 1>./actual/9.0/stdout 2>./actual/9.0/stderr
121/426 Test #242: Test_Sra_Info_Schema_Default ...........................   Passed    0.10 sec
test 243
        Start 243: Test_Sra_Info_Schema_Json

243: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info --schema input/MultiPlatform.sra -fjson" "." "9.1"
243: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info
243: Test timeout computed to be: 9000
243: running 9.1
243: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info --schema input/MultiPlatform.sra -fjson 1>./actual/9.1/stdout 2>./actual/9.1/stderr
122/426 Test #243: Test_Sra_Info_Schema_Json ..............................   Passed    0.10 sec
test 244
        Start 244: Test_Sra_Info_Schema_Xml

244: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info --schema input/MultiPlatform.sra -fxml" "." "9.2"
244: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info
244: Test timeout computed to be: 9000
244: running 9.2
244: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info --schema input/MultiPlatform.sra -fxml 1>./actual/9.2/stdout 2>./actual/9.2/stderr
123/426 Test #244: Test_Sra_Info_Schema_Xml ...............................   Passed    0.09 sec
test 245
        Start 245: Test_Sra_Info_ACPQS_Default

245: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info input/MultiPlatform.sra -ACPQS" "." "10.0"
245: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info
245: Test timeout computed to be: 9000
245: running 10.0
245: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info input/MultiPlatform.sra -ACPQS 1>./actual/10.0/stdout 2>./actual/10.0/stderr
124/426 Test #245: Test_Sra_Info_ACPQS_Default ............................   Passed    0.15 sec
test 246
        Start 246: Test_Sra_Info_ACPQS_Json

246: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info input/MultiPlatform.sra -ACPQS -fjson" "." "10.1"
246: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info
246: Test timeout computed to be: 9000
246: running 10.1
246: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info input/MultiPlatform.sra -ACPQS -fjson 1>./actual/10.1/stdout 2>./actual/10.1/stderr
125/426 Test #246: Test_Sra_Info_ACPQS_Json ...............................   Passed    0.14 sec
test 247
        Start 247: Test_Sra_Info_ACPQS_Xml

247: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info input/MultiPlatform.sra -ACPQS -fxml" "." "10.2"
247: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/external/sra-info
247: Test timeout computed to be: 9000
247: running 10.2
247: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sra-info input/MultiPlatform.sra -ACPQS -fxml 1>./actual/10.2/stdout 2>./actual/10.2/stderr
126/426 Test #247: Test_Sra_Info_ACPQS_Xml ................................   Passed    0.14 sec
test 257
        Start 257: BamTestSetup

257: Test command: /usr/bin/sh "-c" "echo 'vdb/schema/paths = "/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema:/usr/include/ncbi-vdb"
/LIBS/GUID="8test002-6ab7-41b2-bfd0-bamfload"' > tmp.kfg"
257: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/bam-load
257: Test timeout computed to be: 1500
127/426 Test #257: BamTestSetup ...........................................   Passed    0.00 sec
test 258
        Start 258: Test_BamLoader_1

258: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/bam-load" "sh" "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/bam-load -o out.sra test.sam"
258: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/bam-load
258: Test timeout computed to be: 1500
128/426 Test #258: Test_BamLoader_1 .......................................   Passed    0.25 sec
test 259
        Start 259: Test_BamLoader_MinBatchSize

259: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/bam-load" "sh" "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/bam-load -o out.sra --min-batch-size 999999 test.sam"
259: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/bam-load
259: Test timeout computed to be: 1500
129/426 Test #259: Test_BamLoader_MinBatchSize ............................   Passed    0.31 sec
test 260
        Start 260: Test_BamLoader_MinBatchSize_Bad

260: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/bam-load" "sh" "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/bam-load -o out.sra --min-batch-size notanumber test.sam"
260: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/bam-load
260: Test timeout computed to be: 1500
260: min-batch-size: bad value
260: Usage:
260: 	bam-load [options] <bam-file>
260: 
260: Summary:
260: 	Load a BAM formatted data file
260: 
260: Example:
260: 	bam-load -o /tmp/SRZ123456 -k analysis.bam.cfg 123456.bam
260: 
260: 
260: Use option --help for more information.
260: 
260: 2026-05-20T15:14:47 bam-load.3.2.1 err: param incorrect while accessing argument list within application support module - load failed
130/426 Test #260: Test_BamLoader_MinBatchSize_Bad ........................   Passed    0.04 sec
test 261
        Start 261: Test_BamLoader_FewerThan3Threads

261: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/bam-load" "sh" "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/bam-load -o out.sra --threads=2 test.sam"
261: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/bam-load
261: Test timeout computed to be: 1500
261: threads: bad value (must be an integer >=3, or 0)
261: Usage:
261: 	bam-load [options] <bam-file>
261: 
261: Summary:
261: 	Load a BAM formatted data file
261: 
261: Example:
261: 	bam-load -o /tmp/SRZ123456 -k analysis.bam.cfg 123456.bam
261: 
261: 
261: Use option --help for more information.
261: 
261: 2026-05-20T15:14:47 bam-load.3.2.1 err: param incorrect while accessing argument list within application support module - load failed
131/426 Test #261: Test_BamLoader_FewerThan3Threads .......................   Passed    0.03 sec
test 262
        Start 262: Test_BamLoader_ThreadsBad

262: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/bam-load" "sh" "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/bam-load -o out.sra --threads=N test.sam"
262: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/bam-load
262: Test timeout computed to be: 1500
262: threads: bad value (must be an integer >=3, or 0)
262: Usage:
262: 	bam-load [options] <bam-file>
262: 
262: Summary:
262: 	Load a BAM formatted data file
262: 
262: Example:
262: 	bam-load -o /tmp/SRZ123456 -k analysis.bam.cfg 123456.bam
262: 
262: 
262: Use option --help for more information.
262: 
262: 2026-05-20T15:14:47 bam-load.3.2.1 err: param incorrect while accessing argument list within application support module - load failed
132/426 Test #262: Test_BamLoader_ThreadsBad ..............................   Passed    0.03 sec
test 263
        Start 263: Test_BamLoader_platform

263: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_BamLoader_platform
263: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/bam-load
263: Test timeout computed to be: 1500
133/426 Test #263: Test_BamLoader_platform ................................   Passed    0.00 sec
test 264
        Start 264: LatfTestSetup

264: Test command: /usr/bin/sh "-c" "echo 'vdb/schema/paths = "/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema:/usr/include/ncbi-vdb"
/LIBS/GUID="8test002-6ab7-41b2-bfd0-latfload"' > tmp.kfg"
264: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
264: Test timeout computed to be: 1500
134/426 Test #264: LatfTestSetup ..........................................   Passed    0.00 sec
test 265
        Start 265: SlowTest_FastqLoader_id2name

265: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/SlowTest_FastqLoader_id2name
265: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
265: Test timeout computed to be: 1500
265: Running 12 test cases...
265: Init_NullSelf (0 s)
265: Whack_NullSelf (0 s)
265: Init_Whack (0 s)
265: Add_NullSelf (0 s)
265: Add_NullName (0 s)
265: Get_NullSelf (0 s)
265: Get_NullRes (0 s)
265: Get_Empty (0 s)
265: Get_Found (0 s)
265: Get_NotFound (0 s)
265: AddMultiple_Get (0 s)
265: AddRealloc (0 s)
265: 
265: *** No errors detected (0 s total)
135/426 Test #265: SlowTest_FastqLoader_id2name ...........................   Passed    0.01 sec
test 266
        Start 266: Test_FastqLoader_WbFastq_dflt

266: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_FastqLoader_WbFastq_dflt
266: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
266: Test timeout computed to be: 1500
266: Running 103 test cases...
266: EmptyFile (0 s)
266: EndLines (0 s)
266: SyntaxError1 (0 s)
266: SyntaxError2 (0 s)
266: RecoveryFromErrorAtTopLevel (0 s)
266: RecoveryFromErrorInHeader (0 s)
266: RecoveryFromErrorInRead (0 s)
266: RecoveryFromErrorInQuality (0 s)
266: ErrorLineNumber (0 s)
266: Tag1 (0 s)
266: Tag2_1 (0 s)
266: Tag2_2 (0 s)
266: Tag3 (0 s)
266: Tag4 (0 s)
266: Tag5 (0 s)
266: Tag6 (0 s)
266: Tag7 (0 s)
266: Tag8 (0 s)
266: Tag9 (0 s)
266: Tag10 (0 s)
266: Tag11 (0 s)
266: Tag12 (0 s)
266: Tag13 (0 s)
266: Tag14 (0 s)
266: Tag15 (0 s)
266: NotRejected (0 s)
266: SequenceNoAlignment (0 s)
266: TestSequenceGetReadLength (0 s)
266: TestSequenceGetReadLength_MultiLine (0 s)
266: TestSequenceGetRead (0 s)
266: TestSequenceGetRead_MultiLine (0 s)
266: TestSequenceGetRead2 (0 s)
266: TestSequenceGetRead2_StopOutOfRange (0 s)
266: TestSequenceGetRead2_StartOutOfRange (0 s)
266: TestSequenceGetRead2_MultiLine_InsideFirstLine (0 s)
266: TestSequenceGetRead2_MultiLine_InsideSecondLine (0 s)
266: TestSequenceGetRead2_MultiLine_AcrossEOL (0 s)
266: TestSequenceGetRead2_MultiLine_StopOutOfRange (0 s)
266: TestSequenceGetRead2_MultiLine_StartOutOfRange (0 s)
266: SequenceGetQuality33 (0 s)
266: SequenceGetQuality64 (0 s)
266: SequenceGetQualityLogOdds (0 s)
266: SequenceBaseSpace (0 s)
266: SequenceColorSpace (0 s)
266: SequenceGetOrientationIsReverse (0 s)
266: ReadNumber (0 s)
266: ReadNumberMissing (0 s)
266: ReadNumberDefault (0 s)
266: ReadNumberOverride (0 s)
266: RunSpotRead (0 s)
266: RunSpotRead_withTail (0 s)
266: RunSpotNothing (0 s)
266: SequenceGetSpotNameIllumina (0 s)
266: SequenceGetSpotGroupIllumina (0 s)
266: SequenceGetSpotGroupIllumina_Ignored (0 s)
266: SequenceGetSpotGroup_Empty (0 s)
266: SequenceGetSpotGroup_Zero (0 s)
266: SequenceGetSpotGroupBarcode (0 s)
266: SequenceGetSpotGroupBarcode_WithPluses (0 s)
266: SequenceGetSpotGroupUnderscore (0 s)
266: HashStyleBarcodeAndReadNumbersAndJunk (0 s)
266: SequenceWasPaired1 (0 s)
266: SequenceWasPaired2 (0 s)
266: SequenceWasPaired3 (0 s)
266: SequenceWasPaired4 (0 s)
266: SequenceWasPaired5 (0 s)
266: SequenceGetSpotNameOneLine (0 s)
266: SequenceGetNameNumeric (0 s)
266: GtStartsQualityOnly (0 s)
266: OneLineRead (0 s)
266: ForcePhredOffset (0 s)
266: IlluminaCasava_1_8 (0 s)
266: IlluminaCasava_1_8_SpotGroupNumber (0 s)
266: IlluminaCasava_1_8_SpotGroup_MoreMadness (0 s)
266: IlluminaCasava_1_8_EmptyTag (0 s)
266: Illumina_NegativeCoords (0 s)
266: Illumina_Underscore (0 s)
266: Illumina_IdentifierAtFront (0 s)
266: Illumina_SpaceAndIdentifierAtFront (0 s)
266: SRR1778155 (0 s)
266: SRA192487 (0 s)
266: NoEolAtEof (0 s)
266: GtStartsReadOnly (0 s)
266: Quality33TooLow (0 s)
266: Quality64TooLow (0 s)
266: QualityLogoddsTooLow (0 s)
266: DecimalQualityRejected (0 s)
266: PacbioRaw (0 s)
266: PacbioCcs (0 s)
266: PacbioNoReadNumbers (0 s)
266: PacbioWsCcs (0 s)
266: PacbioError (0 s)
266: NotPairedRead_Error (0 s)
266: NoFragmentInfo_Error (0 s)
266: NoColonAtTheEnd_Error (0 s)
266: MissingRead (0 s)
266: UnexpectedEOLreported (0 s)
266: AnotherUnexpectedEOLreported (0 s)
266: FastqDumpOutput (0 s)
266: Barcodes_Plus (0 s)
266: Barcodes_Underscore (0 s)
266: FastqMultiLineSequenceFasta (0 s)
266: FastqMultiLineSequenceFastq (0 s)
266: 
266: *** No errors detected (0 s total)
136/426 Test #266: Test_FastqLoader_WbFastq_dflt ..........................   Passed    0.09 sec
test 267
        Start 267: Test_FastqLoader_WbFastqParse

267: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_FastqLoader_WbFastqParse
267: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
267: Test timeout computed to be: 1500
267: Running 17 test cases...
267: EmptyInput (0 s)
267: TagLine1 (0 s)
267: SequenceQuality (0 s)
267: QualityOnly (0 s)
267: NoEOL_InQuality (0 s)
267: CRnoLF (0 s)
267: CommaSeparatedQuality3 (0 s)
267: WsBeforeEol (0 s)
267: SkipToEol (0 s)
267: InlineBaseSequence (0 s)
267: BufferBreakInTag (0 s)
267: BufferBreakInMultilineRead (0 s)
267: BufferBreakInMultilineQuality (0 s)
267: ReadNumberNotSeparated (0 s)
267: ReadNumberNotSeparated_Variation (0 s)
267: BarcodesReadNumbersJunkOhMy (0 s)
267: Aviti (0 s)
267: 
267: *** No errors detected (0 s total)
137/426 Test #267: Test_FastqLoader_WbFastqParse ..........................   Passed    0.02 sec
test 268
        Start 268: Test_FastqLoader_WbFastqLoader

268: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_FastqLoader_WbFastqLoader
268: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
268: Environment variables: 
268:  NCBI_SETTINGS=/
268:  VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
268: Test timeout computed to be: 1500
268: Running 14 test cases...
268: CommonWriterOneFile (0 s)
268: 2026-05-20T15:14:47 Test_FastqLoader_WbFastqLoader.1.0.0 err: data inconsistent while reading file within application support module - Duplicate read name 'HWUSI-EAS499:1:3:9:1822'
268: CommonWriterDuplicateReadnames_Error (0 s)
268: 2026-05-20T15:14:47 Test_FastqLoader_WbFastqLoader.1.0.0 warn: Spot 'HWUSI-EAS499:1:3:9:1822' has already been assigned a spot id
268: CommonWriterDuplicateReadnames_Allowed (0 s)
268: 2026-05-20T15:14:47 Test_FastqLoader_WbFastqLoader.1.0.0 err: data inconsistent while reading file within application support module - Duplicate read name 'HWUSI-EAS499:1:3:9:1822'
268: CommonWriterDuplicateReadnames_SameFragment (0 s)
268: CommonWriterDuplicateReadnames_DiffFragment (0 s)
268: 2026-05-20T15:14:48 Test_FastqLoader_WbFastqLoader.1.0.0 warn: data inconsistent while reading file within application support module - Spot 'HWUSI-EAS499:1:3:9:1822', which was first seen with mate info, now has no mate info
268: 2026-05-20T15:14:48 Test_FastqLoader_WbFastqLoader.1.0.0 err: data invalid while closing table - Too many bad records: records: 2, bad records: 1, bad records percentage: 0.50, allowed percentage: 0.00
268: CommonWriterDuplicateReadnames_MatedThenUnmated (0 s)
268: 2026-05-20T15:14:48 Test_FastqLoader_WbFastqLoader.1.0.0 warn: data inconsistent while reading file within application support module - Spot 'HWUSI-EAS499:1:3:9:1822', which was first seen without mate info, now has mate info
268: 2026-05-20T15:14:48 Test_FastqLoader_WbFastqLoader.1.0.0 err: data invalid while closing table - Too many bad records: records: 2, bad records: 1, bad records percentage: 0.50, allowed percentage: 0.00
268: CommonWriterDuplicateReadnames_UnmatedThenMated (0 s)
268: NoSpotAssemply (0 s)
268: NoSpotAssemply_case2 (0 s)
268: Interleaved_OneRead (0 s)
268: Interleaved_MultipleReads (0 s)
268: Interleaved_NoMatch (0 s)
268: Interleaved_1_longer (0 s)
268: Interleaved_2_longer (0 s)
268: 
268: *** No errors detected (1 s total)
138/426 Test #268: Test_FastqLoader_WbFastqLoader .........................   Passed    1.52 sec
test 269
        Start 269: Test_FastqLoader_1.1

269: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/1.1.fastq --quality PHRED_33" "." "1.1" "0"
269: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
269: Test timeout computed to be: 1500
269: running 1.1
269: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/1.1.fastq --quality PHRED_33 -o ./actual/1.1/obj 1>./actual/1.1/load.stdout 2>./actual/1.1/load.stderr
139/426 Test #269: Test_FastqLoader_1.1 ...................................   Passed    0.34 sec
test 270
        Start 270: Test_FastqLoader_1.2

270: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/1.2.fastq --quality PHRED_64" "." "1.2" "0"
270: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
270: Test timeout computed to be: 1500
270: running 1.2
270: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/1.2.fastq --quality PHRED_64 -o ./actual/1.2/obj 1>./actual/1.2/load.stdout 2>./actual/1.2/load.stderr
140/426 Test #270: Test_FastqLoader_1.2 ...................................   Passed    0.32 sec
test 271
        Start 271: Test_FastqLoader_1.3

271: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/1.3.fastq --quality PHRED_33" "." "1.3" "3"
271: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
271: Test timeout computed to be: 1500
271: running 1.3
271: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/1.3.fastq --quality PHRED_33 -o ./actual/1.3/obj 1>./actual/1.3/load.stdout 2>./actual/1.3/load.stderr
141/426 Test #271: Test_FastqLoader_1.3 ...................................   Passed    0.15 sec
test 272
        Start 272: Test_FastqLoader_1.4

272: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/1.4.fastq --quality LOGODDS" "." "1.4" "0"
272: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
272: Test timeout computed to be: 1500
272: running 1.4
272: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/1.4.fastq --quality LOGODDS -o ./actual/1.4/obj 1>./actual/1.4/load.stdout 2>./actual/1.4/load.stderr
142/426 Test #272: Test_FastqLoader_1.4 ...................................   Passed    0.33 sec
test 273
        Start 273: Test_FastqLoader_2.1

273: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/2.1.fastq --quality PHRED_33" "." "2.1" "0"
273: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
273: Test timeout computed to be: 1500
273: running 2.1
273: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/2.1.fastq --quality PHRED_33 -o ./actual/2.1/obj 1>./actual/2.1/load.stdout 2>./actual/2.1/load.stderr
143/426 Test #273: Test_FastqLoader_2.1 ...................................   Passed    0.29 sec
test 274
        Start 274: Test_FastqLoader_2.5

274: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/2.5.fastq --quality PHRED_33" "." "2.5" "0"
274: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
274: Test timeout computed to be: 1500
274: running 2.5
274: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/2.5.fastq --quality PHRED_33 -o ./actual/2.5/obj 1>./actual/2.5/load.stdout 2>./actual/2.5/load.stderr
144/426 Test #274: Test_FastqLoader_2.5 ...................................   Passed    0.29 sec
test 275
        Start 275: Test_FastqLoader_2.6

275: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/2.6.fastq --quality PHRED_33" "." "2.6" "0"
275: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
275: Test timeout computed to be: 1500
275: running 2.6
275: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/2.6.fastq --quality PHRED_33 -o ./actual/2.6/obj 1>./actual/2.6/load.stdout 2>./actual/2.6/load.stderr
145/426 Test #275: Test_FastqLoader_2.6 ...................................   Passed    0.29 sec
test 276
        Start 276: Test_FastqLoader_2.7

276: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/2.7.fastq --quality PHRED_33" "." "2.7" "3"
276: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
276: Test timeout computed to be: 1500
276: running 2.7
276: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/2.7.fastq --quality PHRED_33 -o ./actual/2.7/obj 1>./actual/2.7/load.stdout 2>./actual/2.7/load.stderr
146/426 Test #276: Test_FastqLoader_2.7 ...................................   Passed    0.19 sec
test 277
        Start 277: Test_FastqLoader_2.7.1

277: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/2.7.fastq --quality PHRED_33 --allow_duplicates" "." "2.7.1" "0"
277: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
277: Test timeout computed to be: 1500
277: running 2.7.1
277: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/2.7.fastq --quality PHRED_33 --allow_duplicates -o ./actual/2.7.1/obj 1>./actual/2.7.1/load.stdout 2>./actual/2.7.1/load.stderr
147/426 Test #277: Test_FastqLoader_2.7.1 .................................   Passed    0.30 sec
test 278
        Start 278: Test_FastqLoader_2.8.1

278: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/2.8.1.fastq --quality PHRED_33" "." "2.8.1" "0"
278: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
278: Test timeout computed to be: 1500
278: running 2.8.1
278: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/2.8.1.fastq --quality PHRED_33 -o ./actual/2.8.1/obj 1>./actual/2.8.1/load.stdout 2>./actual/2.8.1/load.stderr
148/426 Test #278: Test_FastqLoader_2.8.1 .................................   Passed    0.30 sec
test 279
        Start 279: Test_FastqLoader_2.9

279: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/2.9.fastq --quality PHRED_33" "." "2.9" "3"
279: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
279: Test timeout computed to be: 1500
279: running 2.9
279: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/2.9.fastq --quality PHRED_33 -o ./actual/2.9/obj 1>./actual/2.9/load.stdout 2>./actual/2.9/load.stderr
149/426 Test #279: Test_FastqLoader_2.9 ...................................   Passed    0.14 sec
test 280
        Start 280: Test_FastqLoader_2.9.1

280: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/2.9.1.fastq --quality PHRED_33" "." "2.9.1" "3"
280: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
280: Test timeout computed to be: 1500
280: running 2.9.1
280: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/2.9.1.fastq --quality PHRED_33 -o ./actual/2.9.1/obj 1>./actual/2.9.1/load.stdout 2>./actual/2.9.1/load.stderr
150/426 Test #280: Test_FastqLoader_2.9.1 .................................   Passed    0.16 sec
test 281
        Start 281: Test_FastqLoader_3.1

281: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/3.1a.fastq input/3.1b.fastq --quality PHRED_33" "." "3.1" "0"
281: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
281: Test timeout computed to be: 1500
281: running 3.1
281: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/3.1a.fastq input/3.1b.fastq --quality PHRED_33 -o ./actual/3.1/obj 1>./actual/3.1/load.stdout 2>./actual/3.1/load.stderr
151/426 Test #281: Test_FastqLoader_3.1 ...................................   Passed    0.31 sec
test 282
        Start 282: Test_FastqLoader_4.1

282: Test command: /usr/bin/cmake "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load ./input/4.fastq --tmpfs ./actual -v -o actual/4.1.obj --quality PHRED_33 2>&1 | grep "Path for scratch files: ./actual/key2id""
282: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
282: Test timeout computed to be: 1500
282: 2026-05-20T15:14:52 latf-load.3.2.1: Path for scratch files: ./actual/key2id.3347990.1 
152/426 Test #282: Test_FastqLoader_4.1 ...................................   Passed    0.16 sec
test 283
        Start 283: Test_FastqLoader_4.2

283: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/4.fastq --qual-quant 1:10,10:20,20:30,30:- --quality PHRED_33" "." "4.2" "0"
283: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
283: Test timeout computed to be: 1500
283: running 4.2
283: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/4.fastq --qual-quant 1:10,10:20,20:30,30:- --quality PHRED_33 -o ./actual/4.2/obj 1>./actual/4.2/load.stdout 2>./actual/4.2/load.stderr
153/426 Test #283: Test_FastqLoader_4.2 ...................................   Passed    0.31 sec
test 284
        Start 284: Test_FastqLoader_4.3.1

284: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/4.fastq --cache-size BIG --quality PHRED_33" "." "4.3.1" "3"
284: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
284: Test timeout computed to be: 1500
284: running 4.3.1
284: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/4.fastq --cache-size BIG --quality PHRED_33 -o ./actual/4.3.1/obj 1>./actual/4.3.1/load.stdout 2>./actual/4.3.1/load.stderr
154/426 Test #284: Test_FastqLoader_4.3.1 .................................   Passed    0.05 sec
test 285
        Start 285: Test_FastqLoader_4.5

285: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/4.5.fastq --max-err-count 2 --quality PHRED_33" "." "4.5" "3"
285: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
285: Test timeout computed to be: 1500
285: running 4.5
285: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/4.5.fastq --max-err-count 2 --quality PHRED_33 -o ./actual/4.5/obj 1>./actual/4.5/load.stdout 2>./actual/4.5/load.stderr
155/426 Test #285: Test_FastqLoader_4.5 ...................................   Passed    0.16 sec
test 286
        Start 286: Test_FastqLoader_4.5.2

286: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/4.5.2.fastq --platform ILLUMINA --quality PHRED_33 --max-err-count 2" "." "4.5.2" "3"
286: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
286: Test timeout computed to be: 1500
286: running 4.5.2
286: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/4.5.2.fastq --platform ILLUMINA --quality PHRED_33 --max-err-count 2 -o ./actual/4.5.2/obj 1>./actual/4.5.2/load.stdout 2>./actual/4.5.2/load.stderr
156/426 Test #286: Test_FastqLoader_4.5.2 .................................   Passed    0.17 sec
test 287
        Start 287: Test_FastqLoader_4.6

287: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/4.fastq -p LS454 --quality PHRED_33" "." "4.6" "0"
287: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
287: Test timeout computed to be: 1500
287: running 4.6
287: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/4.fastq -p LS454 --quality PHRED_33 -o ./actual/4.6/obj 1>./actual/4.6/load.stdout 2>./actual/4.6/load.stderr
157/426 Test #287: Test_FastqLoader_4.6 ...................................   Passed    0.30 sec
test 288
        Start 288: Test_FastqLoader_4.6.1

288: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/4.fastq -p SOMETHINGELSE --quality PHRED_33" "." "4.6.1" "3"
288: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
288: Test timeout computed to be: 1500
288: running 4.6.1
288: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/4.fastq -p SOMETHINGELSE --quality PHRED_33 -o ./actual/4.6.1/obj 1>./actual/4.6.1/load.stdout 2>./actual/4.6.1/load.stderr
158/426 Test #288: Test_FastqLoader_4.6.1 .................................   Passed    0.04 sec
test 289
        Start 289: Test_FastqLoader_4.7

289: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/not_there --quality PHRED_33" "." "4.7" "3"
289: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
289: Test timeout computed to be: 1500
289: running 4.7
289: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/not_there --quality PHRED_33 -o ./actual/4.7/obj 1>./actual/4.7/load.stdout 2>./actual/4.7/load.stderr
159/426 Test #289: Test_FastqLoader_4.7 ...................................   Passed    0.15 sec
test 290
        Start 290: Test_FastqLoader_4.8

290: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/4.8.fastq --quality PHRED_33 --no-readnames" "." "4.8" "0"
290: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
290: Test timeout computed to be: 1500
290: running 4.8
290: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/4.8.fastq --quality PHRED_33 --no-readnames -o ./actual/4.8/obj 1>./actual/4.8/load.stdout 2>./actual/4.8/load.stderr
160/426 Test #290: Test_FastqLoader_4.8 ...................................   Passed    0.33 sec
test 291
        Start 291: Test_FastqLoader_5.0

291: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/5.0.fastq.gz --quality PHRED_33" "." "5.0" "0"
291: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
291: Test timeout computed to be: 1500
291: running 5.0
291: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/5.0.fastq.gz --quality PHRED_33 -o ./actual/5.0/obj 1>./actual/5.0/load.stdout 2>./actual/5.0/load.stderr
161/426 Test #291: Test_FastqLoader_5.0 ...................................   Passed    0.30 sec
test 292
        Start 292: Test_FastqLoader_6.0

292: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/6.0.fastq --quality PHRED_33" "." "6.0" "0"
292: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
292: Test timeout computed to be: 1500
292: running 6.0
292: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/6.0.fastq --quality PHRED_33 -o ./actual/6.0/obj 1>./actual/6.0/load.stdout 2>./actual/6.0/load.stderr
162/426 Test #292: Test_FastqLoader_6.0 ...................................   Passed    0.31 sec
test 293
        Start 293: Test_FastqLoader_7.1

293: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/7.1.fastq --platform=PACBIO --quality PHRED_33" "." "7.1" "0"
293: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
293: Test timeout computed to be: 1500
293: running 7.1
293: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/7.1.fastq --platform=PACBIO --quality PHRED_33 -o ./actual/7.1/obj 1>./actual/7.1/load.stdout 2>./actual/7.1/load.stderr
163/426 Test #293: Test_FastqLoader_7.1 ...................................   Passed    0.30 sec
test 294
        Start 294: Test_FastqLoader_7.2

294: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/7.2.fastq --platform=PACBIO --quality PHRED_33" "." "7.2" "0"
294: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
294: Test timeout computed to be: 1500
294: running 7.2
294: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/7.2.fastq --platform=PACBIO --quality PHRED_33 -o ./actual/7.2/obj 1>./actual/7.2/load.stdout 2>./actual/7.2/load.stderr
164/426 Test #294: Test_FastqLoader_7.2 ...................................   Passed    0.30 sec
test 295
        Start 295: Test_FastqLoader_7.3

295: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/7.3.fastq --platform=PACBIO --quality PHRED_33" "." "7.3" "0"
295: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
295: Test timeout computed to be: 1500
295: running 7.3
295: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/7.3.fastq --platform=PACBIO --quality PHRED_33 -o ./actual/7.3/obj 1>./actual/7.3/load.stdout 2>./actual/7.3/load.stderr
165/426 Test #295: Test_FastqLoader_7.3 ...................................   Passed    0.40 sec
test 296
        Start 296: Test_FastqLoader_8.0

296: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/8.0.fastq --quality PHRED_33" "." "8.0" "0"
296: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
296: Test timeout computed to be: 1500
296: running 8.0
296: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/8.0.fastq --quality PHRED_33 -o ./actual/8.0/obj 1>./actual/8.0/load.stdout 2>./actual/8.0/load.stderr
166/426 Test #296: Test_FastqLoader_8.0 ...................................   Passed    0.32 sec
test 297
        Start 297: Test_FastqLoader_8.1

297: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/8.1.fastq --quality PHRED_33" "." "8.1" "3"
297: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
297: Test timeout computed to be: 1500
297: running 8.1
297: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/8.1.fastq --quality PHRED_33 -o ./actual/8.1/obj 1>./actual/8.1/load.stdout 2>./actual/8.1/load.stderr
167/426 Test #297: Test_FastqLoader_8.1 ...................................   Passed    0.37 sec
test 298
        Start 298: Test_FastqLoader_9.0

298: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/9.0.fastq --quality PHRED_33" "." "9.0" "0"
298: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
298: Test timeout computed to be: 1500
298: running 9.0
298: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/9.0.fastq --quality PHRED_33 -o ./actual/9.0/obj 1>./actual/9.0/load.stdout 2>./actual/9.0/load.stderr
168/426 Test #298: Test_FastqLoader_9.0 ...................................   Passed    0.39 sec
test 299
        Start 299: Test_FastqLoader_10.0

299: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/10.0.fastq --quality PHRED_33" "." "10.0" "0"
299: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
299: Test timeout computed to be: 1500
299: running 10.0
299: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/10.0.fastq --quality PHRED_33 -o ./actual/10.0/obj 1>./actual/10.0/load.stdout 2>./actual/10.0/load.stderr
169/426 Test #299: Test_FastqLoader_10.0 ..................................   Passed    0.74 sec
test 300
        Start 300: Test_FastqLoader_11.0

300: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/11.0.1.fasta input/11.0.2.fasta --quality PHRED_33" "." "11.0" "0"
300: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
300: Test timeout computed to be: 1500
300: running 11.0
300: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/11.0.1.fasta input/11.0.2.fasta --quality PHRED_33 -o ./actual/11.0/obj 1>./actual/11.0/load.stdout 2>./actual/11.0/load.stderr
170/426 Test #300: Test_FastqLoader_11.0 ..................................   Passed    0.49 sec
test 301
        Start 301: Test_FastqLoader_11.1

301: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/11.1.1.fastq input/11.1.2.fastq --quality PHRED_33" "." "11.1" "0"
301: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
301: Test timeout computed to be: 1500
301: running 11.1
301: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/11.1.1.fastq input/11.1.2.fastq --quality PHRED_33 -o ./actual/11.1/obj 1>./actual/11.1/load.stdout 2>./actual/11.1/load.stderr
171/426 Test #301: Test_FastqLoader_11.1 ..................................   Passed    0.65 sec
test 302
        Start 302: Test_FastqLoader_12.0

302: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/12.0.fastq --quality PHRED_33 --ignore-illumina-tags" "." "12.0" "0"
302: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
302: Test timeout computed to be: 1500
302: running 12.0
302: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/12.0.fastq --quality PHRED_33 --ignore-illumina-tags -o ./actual/12.0/obj 1>./actual/12.0/load.stdout 2>./actual/12.0/load.stderr
172/426 Test #302: Test_FastqLoader_12.0 ..................................   Passed    0.77 sec
test 303
        Start 303: Test_FastqLoader_12.1

303: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/12.1.fastq --quality PHRED_33" "." "12.1" "0"
303: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
303: Test timeout computed to be: 1500
303: running 12.1
303: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/12.1.fastq --quality PHRED_33 -o ./actual/12.1/obj 1>./actual/12.1/load.stdout 2>./actual/12.1/load.stderr
173/426 Test #303: Test_FastqLoader_12.1 ..................................   Passed    0.75 sec
test 304
        Start 304: Test_FastqLoader_12.2

304: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/12.2.fastq --quality PHRED_33" "." "12.2" "0"
304: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
304: Test timeout computed to be: 1500
304: running 12.2
304: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/12.2.fastq --quality PHRED_33 -o ./actual/12.2/obj 1>./actual/12.2/load.stdout 2>./actual/12.2/load.stderr
174/426 Test #304: Test_FastqLoader_12.2 ..................................   Passed    0.50 sec
test 305
        Start 305: Test_FastqLoader_13.0

305: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/13.0.fastq --quality PHRED_33" "." "13.0" "0"
305: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
305: Test timeout computed to be: 1500
305: running 13.0
305: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/13.0.fastq --quality PHRED_33 -o ./actual/13.0/obj 1>./actual/13.0/load.stdout 2>./actual/13.0/load.stderr
175/426 Test #305: Test_FastqLoader_13.0 ..................................   Passed    0.78 sec
test 306
        Start 306: Test_FastqLoader_13.1

306: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/13.1.fastq --quality PHRED_33" "." "13.1" "0"
306: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
306: Test timeout computed to be: 1500
306: running 13.1
306: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/13.1.fastq --quality PHRED_33 -o ./actual/13.1/obj 1>./actual/13.1/load.stdout 2>./actual/13.1/load.stderr
176/426 Test #306: Test_FastqLoader_13.1 ..................................   Passed    0.58 sec
test 307
        Start 307: Test_FastqLoader_14.0

307: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/14.0.fasta --quality PHRED_33" "." "14.0" "0"
307: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
307: Test timeout computed to be: 1500
307: running 14.0
307: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/14.0.fasta --quality PHRED_33 -o ./actual/14.0/obj 1>./actual/14.0/load.stdout 2>./actual/14.0/load.stderr
177/426 Test #307: Test_FastqLoader_14.0 ..................................   Passed    0.48 sec
test 308
        Start 308: Test_FastqLoader_15.0

308: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump -x READ_SEG" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load ./input/15.0.fastq --quality PHRED_33" "." "15.0" "0"
308: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
308: Test timeout computed to be: 1500
308: running 15.0
308: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load ./input/15.0.fastq --quality PHRED_33 -o ./actual/15.0/obj 1>./actual/15.0/load.stdout 2>./actual/15.0/load.stderr
178/426 Test #308: Test_FastqLoader_15.0 ..................................   Passed    0.82 sec
test 309
        Start 309: Test_FastqLoader_16.0

309: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/16.0.fasta --quality PHRED_33 --platform=PACBIO" "." "16.0" "0"
309: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
309: Test timeout computed to be: 1500
309: running 16.0
309: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/16.0.fasta --quality PHRED_33 --platform=PACBIO -o ./actual/16.0/obj 1>./actual/16.0/load.stdout 2>./actual/16.0/load.stderr
179/426 Test #309: Test_FastqLoader_16.0 ..................................   Passed    0.54 sec
test 310
        Start 310: Test_FastqLoader_16.1

310: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/16.1.fastq --quality PHRED_33 --platform=PACBIO" "." "16.1" "0"
310: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
310: Test timeout computed to be: 1500
310: running 16.1
310: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load input/16.1.fastq --quality PHRED_33 --platform=PACBIO -o ./actual/16.1/obj 1>./actual/16.1/load.stdout 2>./actual/16.1/load.stderr
180/426 Test #310: Test_FastqLoader_16.1 ..................................   Passed    0.57 sec
test 311
        Start 311: Test_FastqLoader_17.0

311: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/17.0.fastq --quality PHRED_33" "." "17.0" "3"
311: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
311: Test timeout computed to be: 1500
311: running 17.0
311: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/17.0.fastq --quality PHRED_33 -o ./actual/17.0/obj 1>./actual/17.0/load.stdout 2>./actual/17.0/load.stderr
181/426 Test #311: Test_FastqLoader_17.0 ..................................   Passed    0.26 sec
test 312
        Start 312: Test_FastqLoader_18.0

312: Test command: /usr/bin/cmake "-E" "env" "NCBI_SETTINGS=/" "/usr/bin/cmake" "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader" "sh" "runtestcase.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-dump " "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/18.0.fastq --quality PHRED_33" "." "18.0" "3"
312: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader
312: Test timeout computed to be: 1500
312: running 18.0
312: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/latf-load /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/fastq-loader/input/18.0.fastq --quality PHRED_33 -o ./actual/18.0/obj 1>./actual/18.0/load.stdout 2>./actual/18.0/load.stderr
182/426 Test #312: Test_FastqLoader_18.0 ..................................   Passed    0.32 sec
test 314
        Start 314: Test_KAPP_qfile

314: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_KAPP_qfile
314: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/loader
314: Test timeout computed to be: 1500
314: start-position : 0
314: queue-size     : 1024
314: block-size     : 0
314: chunk-size     : 1024
183/426 Test #314: Test_KAPP_qfile ........................................   Passed    0.02 sec
test 315
        Start 315: Test_LOADERFILE

315: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_LOADERFILE
315: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/loader
315: Test timeout computed to be: 1500
315: Running 5 test cases...
315: KQueueFile_ReadTimeout_FGsleeps (2 s)
315: KQueueFile_ReadTimeout_BGsleeps (3 s)
315: KQueueFile_WriteTimeout (2 s)
315: KLoaderFile_eolBeforeEof (0 s)
315: KLoaderFile_noEolBeforeEof (0 s)
315: 
315: *** No errors detected (7 s total)
184/426 Test #315: Test_LOADERFILE ........................................   Passed    7.08 sec
test 316
        Start 316: Test_LOADER

316: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_LOADER
316: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/loader
316: Test timeout computed to be: 1500
316: Running 2 test cases...
316: LoaderMeta_Write (0 s)
316: LoaderMeta_WriteWithVersion (0 s)
316: 
316: *** No errors detected (0 s total)
185/426 Test #316: Test_LOADER ............................................   Passed    0.08 sec
test 317
        Start 317: Test_regexpr

317: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/test-regexpr
317: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
317: Test timeout computed to be: 1500
317: Running 4 test cases...
317: Construction (0 s)
317: LastInput (0 s)
317: NoMatch (0 s)
317: YesMatch (0 s)
317: 
317: *** No errors detected (0 s total)
186/426 Test #317: Test_regexpr ...........................................   Passed    0.03 sec
test 318
        Start 318: Test_sharq_reader

318: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/test-sharq-reader
318: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
318: Test timeout computed to be: 1500
318: Running 111 test cases...
318: SplitString (0 s)
318: SplitStringPiece (0 s)
318: EmptyFile (0 s)
318: EndLines (0 s)
318: InvalidDefline (0 s)
318: InvalidDeflineError (0 s)
318: GoodRead (0 s)
318: GoodReadFollowedByJunk (0 s)
318: MultiLineRead (0 s)
318: NoLastLF (0 s)
318: InvalidSequence (0 s)
318: EmptyQuality (0 s)
318: EmptyQualityAtTheEnd (0 s)
318: EmptyQuality2 (0 s)
318: TestSequence (0 s)
318: TestFingerprint (0 s)
318: TestSequence_Multi (0 s)
318: UridineTranslation (0 s)
318: IlluminaNew1 (0 s)
318: IlluminaNew2 (0 s)
318: IlluminaNew3 (0 s)
318: IlluminaNew4 (0 s)
318: IlluminaNew5 (0 s)
318: IlluminaNew6 (0 s)
318: IlluminaNew7 (0 s)
318: IlluminaNew8 (0 s)
318: IlluminaNew9 (0 s)
318: IlluminaNew10 (0 s)
318: IlluminaNew11 (0 s)
318: IlluminaNew12 (0 s)
318: IlluminaNew13 (0 s)
318: IlluminaNew14 (0 s)
318: IlluminaNew15 (0 s)
318: IlluminaNew16 (0 s)
318: IlluminaNew17 (0 s)
318: IlluminaNew18 (0 s)
318: IlluminaNew19 (0 s)
318: IlluminaNew20 (0 s)
318: IlluminaNew21 (0 s)
318: IlluminaNew22 (0 s)
318: IonTorrent2 (0 s)
318: IlluminaNewDataGroup1 (0 s)
318: BGI1 (0 s)
318: BGI2 (0 s)
318: BGI3 (0 s)
318: BGIOld1 (0 s)
318: BgiOld8 (0 s)
318: BgiNewd8 (0 s)
318: IlluminaNoPrefix (0 s)
318: SequenceGetSpotGroupBarcode (0 s)
318: BarCode_Plus (0 s)
318: BarCode_Underscore (0 s)
318: NoColonAtTheEnd_Error (0 s)
318: SequenceGetSpotGroupUnderscore (0 s)
318: RetainIlluminaSuffix (0 s)
318: RetainBgiSuffix (0 s)
318: Test_get_next_spot_empty (0 s)
318: Test_get_next_spot (0 s)
318: Test_get_next_spot_multi_2 (0 s)
318: Test_get_next_spot_multi_1 (0 s)
318: Test_get_spot_empty (0 s)
318: Test_get_spot_no_match (0 s)
318: Test_get_spot_no_match2 (0 s)
318: Test_get_spot_match (0 s)
318: Test_get_spot_match_multi (0 s)
318: Test_get_spot_match_multi_skip (0 s)
318: Test_get_spot_match_multi_skip_2 (0 s)
318: IlluminaCasava_1_8 (0 s)
318: IlluminaCasava_1_8_SpotGroupNumber (0 s)
318: IlluminaCasava_1_8_SpotGroup_MoreMadness (0 s)
318: IlluminaCasava_1_8_EmptyTag (0 s)
318: Illumina_Underscore (0 s)
318: SRA192487 (0 s)
318: BgiNew8Digit (0 s)
318: Quality33TooLow (0 s)
318: Quality33Adjusteed (0 s)
318: Quality64TooLow (0 s)
318: Quality64Adjusted (0 s)
318: [2026-05-20 03:15:12.595] [warning] [code:130] Read DG7PMJN1:293:D12THACXX:2:1101:1161:1968: quality score length exceeds sequence length
318: TextQualityTruncated (0 s)
318: TextQualityAccepted (0 s)
318: TextQualityAdjusted (0 s)
318: [2026-05-20 03:15:12.600] [warning] [code:130] Read DG7PMJN1:293:D12THACXX:2:1101:1161:1968: quality score length exceeds sequence length
318: QualityTooLongTruncated (0 s)
318: Aviti (0 s)
318: Nanopore1_readno_early (0 s)
318: Nanopore1_readno_late (0 s)
318: Nanopore2 (0 s)
318: Nanopore3 (0 s)
318: Nanopore3_1 (0 s)
318: Nanopore4 (0 s)
318: Nanopore4_WithBarcode (0 s)
318: Nanopore4_WithBarcodeUnclassified (0 s)
318: Nanopore4_EmptyChannel (0 s)
318: Nanopore5 (0 s)
318: Nanopore_DefaultReadno (0 s)
318: Nanopore_ReadNoIsAFile (0 s)
318: Nanopore_ReadFilter_Default (0 s)
318: Nanopore_ReadFilter_Pass (0 s)
318: Nanopore_ReadFilter_Fail (0 s)
318: Nanopore_Barcode_BC (0 s)
318: Nanopore_Barcode_Edit (0 s)
318: LS454_1 (0 s)
318: LS454_2 (0 s)
318: LS454_3 (0 s)
318: LS454_4 (0 s)
318: LS454_5 (0 s)
318: LS454_6 (0 s)
318: IonTorrent, case 0: @A313D:7:49
318: IonTorrent, case 1: @RD4FE:00027:00172
318: IonTorrent, case 2: @ONBWR:00329:02356/1
318: IonTorrent, case 3: >311CX:3560:2667   length=347
318: IonTorrent, case 4: @SEDCJ:00674:05781 1:N:0:AAAAA
318: IonTorrent, case 5: @ONBWR:00329:02356#GGTCATTT+TAGGTATG/2
318: IonTorrentTests (0 s)
318: IlluminaOldColon, case 0: @HWIEAS210R_0014:3:28:1070:11942#ATCCCG/1
318: IlluminaOldColon, case 1: @FCABM5A:1:1101:15563:1926#CTAGCGCT_CATTGCTT/1
318: IlluminaOldColon, case 2: @HWI-ST1374:1:1101:1161:2060#0/1
318: IlluminaOldColon, case 3: @ID57_120908_30E4FAAXX:3:1:1772:953/1
318: IlluminaOldColon, case 4: @R1:1:221:197:649/1
318: IlluminaOldColon, case 5: @R16:8:1:0:1617#0/1
318: IlluminaOldColon, case 6: @rumen9533:0:0:0:5
318: IlluminaOldColon, case 7: @HWUSI-BETA8_3:7:1:-1:14
318: IlluminaOldColon, case 8: @IL10_334:1:1:4:606
318: IlluminaOldColon, case 9: @HWUSI-EAS517-74:3:1:1023:8178/1 ~ RGR:Uk6;
318: IlluminaOldColon, case 10: @FCC19K2ACXX:3:1101:1485:2170#/1
318: IlluminaOldColon, case 11: @AMS2007273_SHEN-MISEQ01:47:1:1:12958:1771:0:1#0
318: IlluminaOldColon, case 12: @AMS2007273_SHEN-MISEQ01:47:1:1:17538:1769:0:0#0
318: IlluminaOldColon, case 13: @120315_SN711_0193_BC0KW7ACXX:1:1101:1419:2074:1#0/1
318: IlluminaOldColon, case 14: HWI-ST155_0544:1:1:6804:2058#0/1
318: IlluminaOldColon, case 15: @HWI-ST225:626:C2Y82ACXX:3:1208:2931:82861_1
318: IlluminaOldColon, case 16: @D3LH75P1:1:1101:1054:2148:0 1:1
318: IlluminaOldColon, case 17: @HWI-ST225:626:C2Y82ACXX:3:1208:2222:82880_1
318: IlluminaOldColon, case 18: @FCA5PJ4:1:1101:14707:1407#GTAGTCGC_AGCTCGGT/1
318: IlluminaOldColon, case 19: @SOLEXA-GA02_1:1:1:0:106
318: IlluminaOldColon, case 20: @HWUSI-EAS499:1:3:9:1822#0/1
318: IlluminaOldColon, case 21: @BILLIEHOLIDAY_1_FC20F3DAAXX:8:2:342:540
318: IlluminaOldColon, case 22: >KN-930:1:1:653:356
318: IlluminaOldColon, case 23: USI-EAS50_1:6:1:392:881
318: IlluminaOldColon, case 24: @HWI-EAS299_2_30MNAAAXX:5:1:936:1505/1
318: IlluminaOldColon, case 25: @HWI-EAS-249:7:1:1:443/1
318: IlluminaOldColon, case 26: @HWI-EAS385_0086_FC:1:1:1239:943#0/1
318: IlluminaOldColon, case 27: @HWUSI-EAS613-R_0001:8:1:1020:14660#0/1
318: IlluminaOldColon, case 28: @ILLUMINA-D01686_0001:7:1:1028:14175#0/1
318: IlluminaOldColon, case 29: @741:6:1:1204:10747/1
318: IlluminaOldColon, case 30: @1920:1:1:1504:1082/1
318: IlluminaOldColon, case 31: @HWI-EAS397_0013:1:1:1083:11725#0/1
318: IlluminaOldColon, case 32: >HWI-EAS6_4_FC2010T:1:1:80:366
318: IlluminaOldColon, case 33: @NUTELLA_42A08AAXX:4:001:0003:0089/1
318: IlluminaOldColon, case 34: @R16:8:1:0:875#0/1
318: IlluminaOldColon, case 35: HWI-EAS102_1_30LWPAAXX:5:1:1456:776
318: IlluminaOldColon, case 36: @HWI-EAS390_30VGNAAXX1:1:1:377:1113/1
318: IlluminaOldColon, case 37: @ID57_120908_30E4FAAXX:3:1:1772:953/1
318: IlluminaOldColon, case 38: HWI-EAS440_102:8:1:168:1332
318: IlluminaOldColon, case 39: @SNPSTER4_246_30GCDAAXX_PE:1:1:3:896/1
318: IlluminaOldColon, case 40: @FC42AUBAAXX:6:1:4:1280#TGACCA/1
318: IlluminaOldColon, case 41: @SOLEXA9:1:1:1:2005#0/1
318: IlluminaOldColon, case 42: @SNPSTER3_264_30JGGAAXX_PE:2:1:218:311/1
318: IlluminaOldColon, case 43: @HWUSI-EAS535_0001:7:1:747:14018#0/1
318: IlluminaOldColon, case 44: @FC42ATTAAXX:5:1:0:20481
318: IlluminaOldColon, case 45: @HWUSI-EAS1571_0012:8:1:1017:20197#0/1
318: IlluminaOldColon, case 46: @SOLEXA1_0052_FC:8:1:1508:1078#TTAGGC/1
318: IlluminaOldColon, case 47: @SN971:2:1101:15.80:103.70#0/1
318: IlluminaOldUnderscore, case 0: @HWI-EAS30_2_FC200HWAAXX_4_1_646_399
318: IlluminaOldUnderscore, case 1: @ATGCT_7_1101_1418_2098_1
318: IlluminaOldUnderscore, case 2: @BILLIEHOLIDAY_1_FC200TYAAXX_3_1_751_675
318: IlluminaOldUnderscore, case 3: @HWI-EAS30_2_FC20416AAXX_7_1_116_317
318: IlluminaOldUnderscore, case 4: @FC12044_91407_8_1_46_673
318: IlluminaOldNoPrefix, case 0: @7:1:792:533
318: IlluminaOldNoPrefix, case 1: @7:1:164:-0
318: IlluminaOldNoPrefix, case 2: @MB27-02-1:1101:1723:2171 /1
318: IlluminaOldWithSuffix, case 0: @HWI-IT879:92:5:1101:1170:2026#0/1:0
318: IlluminaOldWithSuffix2, case 0: >M01056:83:000000000-A7GBN:1:1108:17094:2684--W1
318: IlluminaOldTests (0 s)
318: PacBio, case 0: @m120525_202528_42132_c100323432550000001523017609061234_s1_p0/43
318: PacBio, case 1: @m101111_134728_richard_c000027022550000000115022502211150_s1_p0/1
318: PacBio, case 2: @m110115_082846_Uni_c000000000000000000000012706400001_s3_p0/1/0_508
318: PacBio, case 3: @m130727_043304_42150_c100538232550000001823086511101337_s1_p0/16/0_5273
318: PacBio, case 4: @m120328_022709_00128_c100311312550000001523011808061260_s1_p0/129/0_4701
318: PacBio, case 5: @m120204_011539_00128_c100220982555400000315052304111230_s2_p0/8/0_1446
318: PacBio2, case 6: @m54261_181223_050738_4194378
318: PacBio2, case 7: @m64049_200827_171349/2/ccs
318: PacBio2, case 8: @m54336U_191028_160945/1/120989_128438
318: PacBioTests (0 s)
318: illuminaOldBcRnOnly (0 s)
318: illuminaOldBcOnly (0 s)
318: 
318: *** No errors detected (0 s total)
187/426 Test #318: Test_sharq_reader ......................................   Passed    0.49 sec
test 319
        Start 319: Test_sharq_parser

319: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/test-sharq-parser
319: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
319: Test timeout computed to be: 1500
319: Running 1 test case...
319: [2026-05-20 03:15:12.805] [info] Parsing from 2 files
319: [2026-05-20 03:15:13.024] [parser_logger] [info] spots: 0, reads: 0
319: TestSequence (0 s)
319: 
319: *** No errors detected (0 s total)
188/426 Test #319: Test_sharq_parser ......................................   Passed    0.34 sec
test 320
        Start 320: Test_sharq_writer

320: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/test-sharq-writer
320: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
320: Test timeout computed to be: 1500
320: Running 8 test cases...
320: Construct (0 s)
320: SetAttr (0 s)
320: Destination (0 s)
320: DefaultSchema (0 s)
320: IlluminaSchema (0 s)
320: NanoporeSchema (0 s)
320: NanoporeSpecificColumns (0 s)
320: Fingerprinting (0 s)
320: 
320: *** No errors detected (0 s total)
189/426 Test #320: Test_sharq_writer ......................................   Passed    0.01 sec
test 321
        Start 321: Test_001.read.supported

321: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.supported" "0" "0" "--debug" "--no-timestamp" "input/001.R1.fastq"
321: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
321: Test timeout computed to be: 1500
321: running 001.read.supported
321: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp input/001.R1.fastq 1>./actual/001.read.supported/load.stdout 2>./actual/001.read.supported/load.stderr
190/426 Test #321: Test_001.read.supported ................................   Passed    0.28 sec
test 322
        Start 322: Test_001.read.supported-sa-hot

322: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.supported-sa-hot" "0" "0" "--debug" "--no-timestamp" "--spot-assembly input/001.R1.fastq"
322: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
322: Test timeout computed to be: 1500
322: running 001.read.supported-sa-hot
322: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly input/001.R1.fastq 1>./actual/001.read.supported-sa-hot/load.stdout 2>./actual/001.read.supported-sa-hot/load.stderr
191/426 Test #322: Test_001.read.supported-sa-hot .........................   Passed    0.45 sec
test 323
        Start 323: Test_001.read.supported-sa-cold

323: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.supported-sa-cold" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 input/001.R1.fastq"
323: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
323: Test timeout computed to be: 1500
323: running 001.read.supported-sa-cold
323: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 input/001.R1.fastq 1>./actual/001.read.supported-sa-cold/load.stdout 2>./actual/001.read.supported-sa-cold/load.stderr
192/426 Test #323: Test_001.read.supported-sa-cold ........................   Passed    0.46 sec
test 324
        Start 324: Test_001.read.unsupported

324: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.unsupported" "1" "0" "--debug" "--no-timestamp" "--max-err-count 0 input/001.read.unsupported.fq"
324: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
324: Test timeout computed to be: 1500
324: running 001.read.unsupported
324: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --max-err-count 0 input/001.read.unsupported.fq 1>./actual/001.read.unsupported/load.stdout 2>./actual/001.read.unsupported/load.stderr
193/426 Test #324: Test_001.read.unsupported ..............................   Passed    0.14 sec
test 325
        Start 325: Test_001.read.unsupported-sa-hot

325: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.unsupported-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --max-err-count 0 input/001.read.unsupported.fq"
325: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
325: Test timeout computed to be: 1500
325: running 001.read.unsupported-sa-hot
325: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --max-err-count 0 input/001.read.unsupported.fq 1>./actual/001.read.unsupported-sa-hot/load.stdout 2>./actual/001.read.unsupported-sa-hot/load.stderr
194/426 Test #325: Test_001.read.unsupported-sa-hot .......................   Passed    0.14 sec
test 326
        Start 326: Test_001.read.unsupported-sa-cold

326: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.unsupported-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/001.read.unsupported.fq"
326: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
326: Test timeout computed to be: 1500
326: running 001.read.unsupported-sa-cold
326: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/001.read.unsupported.fq 1>./actual/001.read.unsupported-sa-cold/load.stdout 2>./actual/001.read.unsupported-sa-cold/load.stderr
195/426 Test #326: Test_001.read.unsupported-sa-cold ......................   Passed    0.14 sec
test 327
        Start 327: Test_001.read.no_sequence

327: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.no_sequence" "1" "0" "--debug" "--no-timestamp" "--max-err-count 0 input/001.read.no_sequence.fq"
327: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
327: Test timeout computed to be: 1500
327: running 001.read.no_sequence
327: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --max-err-count 0 input/001.read.no_sequence.fq 1>./actual/001.read.no_sequence/load.stdout 2>./actual/001.read.no_sequence/load.stderr
196/426 Test #327: Test_001.read.no_sequence ..............................   Passed    0.05 sec
test 328
        Start 328: Test_001.read.no_sequence-sa-hot

328: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.no_sequence-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --max-err-count 0 input/001.read.no_sequence.fq"
328: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
328: Test timeout computed to be: 1500
328: running 001.read.no_sequence-sa-hot
328: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --max-err-count 0 input/001.read.no_sequence.fq 1>./actual/001.read.no_sequence-sa-hot/load.stdout 2>./actual/001.read.no_sequence-sa-hot/load.stderr
197/426 Test #328: Test_001.read.no_sequence-sa-hot .......................   Passed    0.06 sec
test 329
        Start 329: Test_001.read.no_sequence-sa-cold

329: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.no_sequence-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/001.read.no_sequence.fq"
329: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
329: Test timeout computed to be: 1500
329: running 001.read.no_sequence-sa-cold
329: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/001.read.no_sequence.fq 1>./actual/001.read.no_sequence-sa-cold/load.stdout 2>./actual/001.read.no_sequence-sa-cold/load.stderr
198/426 Test #329: Test_001.read.no_sequence-sa-cold ......................   Passed    0.11 sec
test 330
        Start 330: Test_001.read.invalid_sequence

330: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.invalid_sequence" "1" "0" "--debug" "--no-timestamp" "--max-err-count 0 input/001.read.invalid_sequence.fq"
330: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
330: Test timeout computed to be: 1500
330: running 001.read.invalid_sequence
330: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --max-err-count 0 input/001.read.invalid_sequence.fq 1>./actual/001.read.invalid_sequence/load.stdout 2>./actual/001.read.invalid_sequence/load.stderr
199/426 Test #330: Test_001.read.invalid_sequence .........................   Passed    0.14 sec
test 331
        Start 331: Test_001.read.invalid_sequence-sa-hot

331: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.invalid_sequence-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --max-err-count 0 input/001.read.invalid_sequence.fq"
331: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
331: Test timeout computed to be: 1500
331: running 001.read.invalid_sequence-sa-hot
331: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --max-err-count 0 input/001.read.invalid_sequence.fq 1>./actual/001.read.invalid_sequence-sa-hot/load.stdout 2>./actual/001.read.invalid_sequence-sa-hot/load.stderr
200/426 Test #331: Test_001.read.invalid_sequence-sa-hot ..................   Passed    0.14 sec
test 332
        Start 332: Test_001.read.invalid_sequence-sa-cold

332: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.invalid_sequence-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/001.read.invalid_sequence.fq"
332: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
332: Test timeout computed to be: 1500
332: running 001.read.invalid_sequence-sa-cold
332: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/001.read.invalid_sequence.fq 1>./actual/001.read.invalid_sequence-sa-cold/load.stdout 2>./actual/001.read.invalid_sequence-sa-cold/load.stderr
201/426 Test #332: Test_001.read.invalid_sequence-sa-cold .................   Passed    0.14 sec
test 333
        Start 333: Test_001.read.no_quality

333: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.no_quality" "1" "0" "--debug" "--no-timestamp" "--max-err-count 0 input/001.read.no_quality.fq"
333: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
333: Test timeout computed to be: 1500
333: running 001.read.no_quality
333: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --max-err-count 0 input/001.read.no_quality.fq 1>./actual/001.read.no_quality/load.stdout 2>./actual/001.read.no_quality/load.stderr
202/426 Test #333: Test_001.read.no_quality ...............................   Passed    0.14 sec
test 334
        Start 334: Test_001.read.no_quality-sa-hot

334: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.no_quality-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --max-err-count 0 input/001.read.no_quality.fq"
334: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
334: Test timeout computed to be: 1500
334: running 001.read.no_quality-sa-hot
334: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --max-err-count 0 input/001.read.no_quality.fq 1>./actual/001.read.no_quality-sa-hot/load.stdout 2>./actual/001.read.no_quality-sa-hot/load.stderr
203/426 Test #334: Test_001.read.no_quality-sa-hot ........................   Passed    0.15 sec
test 335
        Start 335: Test_001.read.no_quality-sa-cold

335: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.no_quality-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/001.read.no_quality.fq"
335: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
335: Test timeout computed to be: 1500
335: running 001.read.no_quality-sa-cold
335: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/001.read.no_quality.fq 1>./actual/001.read.no_quality-sa-cold/load.stdout 2>./actual/001.read.no_quality-sa-cold/load.stderr
204/426 Test #335: Test_001.read.no_quality-sa-cold .......................   Passed    0.12 sec
test 336
        Start 336: Test_001.read.no_quality_2

336: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.no_quality_2" "1" "0" "--debug" "--no-timestamp" "--max-err-count 0 input/001.read.no_quality_2.fq"
336: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
336: Test timeout computed to be: 1500
336: running 001.read.no_quality_2
336: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --max-err-count 0 input/001.read.no_quality_2.fq 1>./actual/001.read.no_quality_2/load.stdout 2>./actual/001.read.no_quality_2/load.stderr
205/426 Test #336: Test_001.read.no_quality_2 .............................   Passed    0.07 sec
test 337
        Start 337: Test_001.read.no_quality_2-sa-hot

337: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.no_quality_2-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --max-err-count 0 input/001.read.no_quality_2.fq"
337: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
337: Test timeout computed to be: 1500
337: running 001.read.no_quality_2-sa-hot
337: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --max-err-count 0 input/001.read.no_quality_2.fq 1>./actual/001.read.no_quality_2-sa-hot/load.stdout 2>./actual/001.read.no_quality_2-sa-hot/load.stderr
206/426 Test #337: Test_001.read.no_quality_2-sa-hot ......................   Passed    0.04 sec
test 338
        Start 338: Test_001.read.no_quality_2-sa-cold

338: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.no_quality_2-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/001.read.no_quality_2.fq"
338: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
338: Test timeout computed to be: 1500
338: running 001.read.no_quality_2-sa-cold
338: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/001.read.no_quality_2.fq 1>./actual/001.read.no_quality_2-sa-cold/load.stdout 2>./actual/001.read.no_quality_2-sa-cold/load.stderr
207/426 Test #338: Test_001.read.no_quality_2-sa-cold .....................   Passed    0.02 sec
test 339
        Start 339: Test_001.read.invalid_quality33

339: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.invalid_quality33" "1" "0" "--debug" "--no-timestamp" "--max-err-count 0 --quality=33 input/001.read.invalid_quality33.fq"
339: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
339: Test timeout computed to be: 1500
339: running 001.read.invalid_quality33
339: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --max-err-count 0 --quality=33 input/001.read.invalid_quality33.fq 1>./actual/001.read.invalid_quality33/load.stdout 2>./actual/001.read.invalid_quality33/load.stderr
208/426 Test #339: Test_001.read.invalid_quality33 ........................   Passed    0.02 sec
test 340
        Start 340: Test_001.read.invalid_quality33-sa-hot

340: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.invalid_quality33-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --max-err-count 0 --quality=33 input/001.read.invalid_quality33.fq"
340: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
340: Test timeout computed to be: 1500
340: running 001.read.invalid_quality33-sa-hot
340: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --max-err-count 0 --quality=33 input/001.read.invalid_quality33.fq 1>./actual/001.read.invalid_quality33-sa-hot/load.stdout 2>./actual/001.read.invalid_quality33-sa-hot/load.stderr
209/426 Test #340: Test_001.read.invalid_quality33-sa-hot .................   Passed    0.03 sec
test 341
        Start 341: Test_001.read.invalid_quality33-sa-cold

341: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.invalid_quality33-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --max-err-count 0 --quality=33 input/001.read.invalid_quality33.fq"
341: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
341: Test timeout computed to be: 1500
341: running 001.read.invalid_quality33-sa-cold
341: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --max-err-count 0 --quality=33 input/001.read.invalid_quality33.fq 1>./actual/001.read.invalid_quality33-sa-cold/load.stdout 2>./actual/001.read.invalid_quality33-sa-cold/load.stderr
210/426 Test #341: Test_001.read.invalid_quality33-sa-cold ................   Passed    0.04 sec
test 342
        Start 342: Test_001.read.invalid_quality64

342: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.invalid_quality64" "1" "0" "--debug" "--no-timestamp" "--max-err-count 0 --quality=64 input/001.read.invalid_quality64.fq"
342: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
342: Test timeout computed to be: 1500
342: running 001.read.invalid_quality64
342: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --max-err-count 0 --quality=64 input/001.read.invalid_quality64.fq 1>./actual/001.read.invalid_quality64/load.stdout 2>./actual/001.read.invalid_quality64/load.stderr
211/426 Test #342: Test_001.read.invalid_quality64 ........................   Passed    0.19 sec
test 343
        Start 343: Test_001.read.invalid_quality64-sa-hot

343: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.invalid_quality64-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --max-err-count 0 --quality=64 input/001.read.invalid_quality64.fq"
343: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
343: Test timeout computed to be: 1500
343: running 001.read.invalid_quality64-sa-hot
343: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --max-err-count 0 --quality=64 input/001.read.invalid_quality64.fq 1>./actual/001.read.invalid_quality64-sa-hot/load.stdout 2>./actual/001.read.invalid_quality64-sa-hot/load.stderr
212/426 Test #343: Test_001.read.invalid_quality64-sa-hot .................   Passed    0.13 sec
test 344
        Start 344: Test_001.read.invalid_quality64-sa-cold

344: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.invalid_quality64-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --max-err-count 0 --quality=64 input/001.read.invalid_quality64.fq"
344: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
344: Test timeout computed to be: 1500
344: running 001.read.invalid_quality64-sa-cold
344: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --max-err-count 0 --quality=64 input/001.read.invalid_quality64.fq 1>./actual/001.read.invalid_quality64-sa-cold/load.stdout 2>./actual/001.read.invalid_quality64-sa-cold/load.stderr
213/426 Test #344: Test_001.read.invalid_quality64-sa-cold ................   Passed    0.20 sec
test 345
        Start 345: Test_001.read.invalid_quality0

345: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.invalid_quality0" "1" "0" "--debug" "--no-timestamp" "--max-err-count 0 --quality=0 input/001.read.invalid_quality0.fq"
345: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
345: Test timeout computed to be: 1500
345: running 001.read.invalid_quality0
345: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --max-err-count 0 --quality=0 input/001.read.invalid_quality0.fq 1>./actual/001.read.invalid_quality0/load.stdout 2>./actual/001.read.invalid_quality0/load.stderr
214/426 Test #345: Test_001.read.invalid_quality0 .........................   Passed    0.06 sec
test 346
        Start 346: Test_001.read.invalid_quality0-sa-hot

346: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.invalid_quality0-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --max-err-count 0 --quality=0 input/001.read.invalid_quality0.fq"
346: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
346: Test timeout computed to be: 1500
346: running 001.read.invalid_quality0-sa-hot
346: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --max-err-count 0 --quality=0 input/001.read.invalid_quality0.fq 1>./actual/001.read.invalid_quality0-sa-hot/load.stdout 2>./actual/001.read.invalid_quality0-sa-hot/load.stderr
215/426 Test #346: Test_001.read.invalid_quality0-sa-hot ..................   Passed    0.08 sec
test 347
        Start 347: Test_001.read.invalid_quality0-sa-cold

347: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.invalid_quality0-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --max-err-count 0 --quality=0 input/001.read.invalid_quality0.fq"
347: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
347: Test timeout computed to be: 1500
347: running 001.read.invalid_quality0-sa-cold
347: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --max-err-count 0 --quality=0 input/001.read.invalid_quality0.fq 1>./actual/001.read.invalid_quality0-sa-cold/load.stdout 2>./actual/001.read.invalid_quality0-sa-cold/load.stderr
216/426 Test #347: Test_001.read.invalid_quality0-sa-cold .................   Passed    0.14 sec
test 348
        Start 348: Test_001.read.long_quality

348: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.long_quality" "0" "0" "--debug" "--no-timestamp" "--max-err-count 0 input/001.read.long_quality.fq"
348: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
348: Test timeout computed to be: 1500
348: running 001.read.long_quality
348: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --max-err-count 0 input/001.read.long_quality.fq 1>./actual/001.read.long_quality/load.stdout 2>./actual/001.read.long_quality/load.stderr
217/426 Test #348: Test_001.read.long_quality .............................   Passed    0.36 sec
test 349
        Start 349: Test_001.read.long_quality-sa-hot

349: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.long_quality-sa-hot" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --max-err-count 0 input/001.read.long_quality.fq"
349: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
349: Test timeout computed to be: 1500
349: running 001.read.long_quality-sa-hot
349: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --max-err-count 0 input/001.read.long_quality.fq 1>./actual/001.read.long_quality-sa-hot/load.stdout 2>./actual/001.read.long_quality-sa-hot/load.stderr
218/426 Test #349: Test_001.read.long_quality-sa-hot ......................   Passed    0.46 sec
test 350
        Start 350: Test_001.read.long_quality-sa-cold

350: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.long_quality-sa-cold" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/001.read.long_quality.fq"
350: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
350: Test timeout computed to be: 1500
350: running 001.read.long_quality-sa-cold
350: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/001.read.long_quality.fq 1>./actual/001.read.long_quality-sa-cold/load.stdout 2>./actual/001.read.long_quality-sa-cold/load.stderr
219/426 Test #350: Test_001.read.long_quality-sa-cold .....................   Passed    0.27 sec
test 351
        Start 351: Test_001.read.bad_quality0

351: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.bad_quality0" "1" "0" "--debug" "--no-timestamp" "--max-err-count 0 input/001.read.bad_quality0.fq"
351: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
351: Test timeout computed to be: 1500
351: running 001.read.bad_quality0
351: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --max-err-count 0 input/001.read.bad_quality0.fq 1>./actual/001.read.bad_quality0/load.stdout 2>./actual/001.read.bad_quality0/load.stderr
220/426 Test #351: Test_001.read.bad_quality0 .............................   Passed    0.09 sec
test 352
        Start 352: Test_001.read.bad_quality0-sa-hot

352: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.bad_quality0-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --max-err-count 0 input/001.read.bad_quality0.fq"
352: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
352: Test timeout computed to be: 1500
352: running 001.read.bad_quality0-sa-hot
352: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --max-err-count 0 input/001.read.bad_quality0.fq 1>./actual/001.read.bad_quality0-sa-hot/load.stdout 2>./actual/001.read.bad_quality0-sa-hot/load.stderr
221/426 Test #352: Test_001.read.bad_quality0-sa-hot ......................   Passed    0.02 sec
test 353
        Start 353: Test_001.read.bad_quality0-sa-cold

353: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.bad_quality0-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/001.read.bad_quality0.fq"
353: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
353: Test timeout computed to be: 1500
353: running 001.read.bad_quality0-sa-cold
353: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/001.read.bad_quality0.fq 1>./actual/001.read.bad_quality0-sa-cold/load.stdout 2>./actual/001.read.bad_quality0-sa-cold/load.stderr
222/426 Test #353: Test_001.read.bad_quality0-sa-cold .....................   Passed    0.04 sec
test 354
        Start 354: Test_001.read.bad_quality33

354: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.bad_quality33" "1" "0" "--debug" "--no-timestamp" "--max-err-count 0 input/001.read.bad_quality33.fq"
354: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
354: Test timeout computed to be: 1500
354: running 001.read.bad_quality33
354: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --max-err-count 0 input/001.read.bad_quality33.fq 1>./actual/001.read.bad_quality33/load.stdout 2>./actual/001.read.bad_quality33/load.stderr
223/426 Test #354: Test_001.read.bad_quality33 ............................   Passed    0.08 sec
test 355
        Start 355: Test_001.read.bad_quality33-sa-hot

355: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.bad_quality33-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --max-err-count 0 input/001.read.bad_quality33.fq"
355: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
355: Test timeout computed to be: 1500
355: running 001.read.bad_quality33-sa-hot
355: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --max-err-count 0 input/001.read.bad_quality33.fq 1>./actual/001.read.bad_quality33-sa-hot/load.stdout 2>./actual/001.read.bad_quality33-sa-hot/load.stderr
224/426 Test #355: Test_001.read.bad_quality33-sa-hot .....................   Passed    0.04 sec
test 356
        Start 356: Test_001.read.bad_quality33-sa-cold

356: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "001.read.bad_quality33-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/001.read.bad_quality33.fq"
356: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
356: Test timeout computed to be: 1500
356: running 001.read.bad_quality33-sa-cold
356: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/001.read.bad_quality33.fq 1>./actual/001.read.bad_quality33-sa-cold/load.stdout 2>./actual/001.read.bad_quality33-sa-cold/load.stderr
225/426 Test #356: Test_001.read.bad_quality33-sa-cold ....................   Passed    0.05 sec
test 357
        Start 357: Test_002.readTypes_default

357: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_default" "0" "0" "--debug" "--no-timestamp" "input/002.allBiological_1.fq input/002.allBiological_2.fq"
357: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
357: Test timeout computed to be: 1500
357: running 002.readTypes_default
357: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp input/002.allBiological_1.fq input/002.allBiological_2.fq 1>./actual/002.readTypes_default/load.stdout 2>./actual/002.readTypes_default/load.stderr
226/426 Test #357: Test_002.readTypes_default .............................   Passed    0.37 sec
test 358
        Start 358: Test_002.readTypes_default-sa-hot

358: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_default-sa-hot" "0" "0" "--debug" "--no-timestamp" "--spot-assembly input/002.allBiological_1.fq input/002.allBiological_2.fq"
358: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
358: Test timeout computed to be: 1500
358: running 002.readTypes_default-sa-hot
358: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly input/002.allBiological_1.fq input/002.allBiological_2.fq 1>./actual/002.readTypes_default-sa-hot/load.stdout 2>./actual/002.readTypes_default-sa-hot/load.stderr
227/426 Test #358: Test_002.readTypes_default-sa-hot ......................   Passed    0.63 sec
test 359
        Start 359: Test_002.readTypes_default-sa-cold

359: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_default-sa-cold" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 input/002.allBiological_1.fq input/002.allBiological_2.fq"
359: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
359: Test timeout computed to be: 1500
359: running 002.readTypes_default-sa-cold
359: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 input/002.allBiological_1.fq input/002.allBiological_2.fq 1>./actual/002.readTypes_default-sa-cold/load.stdout 2>./actual/002.readTypes_default-sa-cold/load.stderr
228/426 Test #359: Test_002.readTypes_default-sa-cold .....................   Passed    0.69 sec
test 360
        Start 360: Test_002.readTypes_technical

360: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_technical" "0" "0" "--debug" "--no-timestamp" "--readTypes=TT input/002.allBiological_1.fq input/002.allBiological_2.fq"
360: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
360: Test timeout computed to be: 1500
360: running 002.readTypes_technical
360: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --readTypes=TT input/002.allBiological_1.fq input/002.allBiological_2.fq 1>./actual/002.readTypes_technical/load.stdout 2>./actual/002.readTypes_technical/load.stderr
229/426 Test #360: Test_002.readTypes_technical ...........................   Passed    0.46 sec
test 361
        Start 361: Test_002.readTypes_technical-sa-hot

361: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_technical-sa-hot" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --readTypes=TT input/002.allBiological_1.fq input/002.allBiological_2.fq"
361: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
361: Test timeout computed to be: 1500
361: running 002.readTypes_technical-sa-hot
361: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --readTypes=TT input/002.allBiological_1.fq input/002.allBiological_2.fq 1>./actual/002.readTypes_technical-sa-hot/load.stdout 2>./actual/002.readTypes_technical-sa-hot/load.stderr
230/426 Test #361: Test_002.readTypes_technical-sa-hot ....................   Passed    0.77 sec
test 362
        Start 362: Test_002.readTypes_technical-sa-cold

362: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_technical-sa-cold" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --readTypes=TT input/002.allBiological_1.fq input/002.allBiological_2.fq"
362: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
362: Test timeout computed to be: 1500
362: running 002.readTypes_technical-sa-cold
362: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --readTypes=TT input/002.allBiological_1.fq input/002.allBiological_2.fq 1>./actual/002.readTypes_technical-sa-cold/load.stdout 2>./actual/002.readTypes_technical-sa-cold/load.stderr
231/426 Test #362: Test_002.readTypes_technical-sa-cold ...................   Passed    0.66 sec
test 363
        Start 363: Test_002.readTypes_mixed

363: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_mixed" "0" "0" "--debug" "--no-timestamp" "--readTypes=TB input/002.allBiological_1.fq input/002.allBiological_2.fq"
363: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
363: Test timeout computed to be: 1500
363: running 002.readTypes_mixed
363: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --readTypes=TB input/002.allBiological_1.fq input/002.allBiological_2.fq 1>./actual/002.readTypes_mixed/load.stdout 2>./actual/002.readTypes_mixed/load.stderr
232/426 Test #363: Test_002.readTypes_mixed ...............................   Passed    0.41 sec
test 364
        Start 364: Test_002.readTypes_mixed-sa-hot

364: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_mixed-sa-hot" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --readTypes=TB input/002.allBiological_1.fq input/002.allBiological_2.fq"
364: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
364: Test timeout computed to be: 1500
364: running 002.readTypes_mixed-sa-hot
364: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --readTypes=TB input/002.allBiological_1.fq input/002.allBiological_2.fq 1>./actual/002.readTypes_mixed-sa-hot/load.stdout 2>./actual/002.readTypes_mixed-sa-hot/load.stderr
233/426 Test #364: Test_002.readTypes_mixed-sa-hot ........................   Passed    0.59 sec
test 365
        Start 365: Test_002.readTypes_mixed-sa-cold

365: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_mixed-sa-cold" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --readTypes=TB input/002.allBiological_1.fq input/002.allBiological_2.fq"
365: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
365: Test timeout computed to be: 1500
365: running 002.readTypes_mixed-sa-cold
365: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --readTypes=TB input/002.allBiological_1.fq input/002.allBiological_2.fq 1>./actual/002.readTypes_mixed-sa-cold/load.stdout 2>./actual/002.readTypes_mixed-sa-cold/load.stderr
234/426 Test #365: Test_002.readTypes_mixed-sa-cold .......................   Passed    0.82 sec
test 366
        Start 366: Test_002.readTypes_missing

366: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_missing" "1" "0" "--debug" "--no-timestamp" "--read1PairFiles=input/001.R1.fastq"
366: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
366: Test timeout computed to be: 1500
366: running 002.readTypes_missing
366: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --read1PairFiles=input/001.R1.fastq 1>./actual/002.readTypes_missing/load.stdout 2>./actual/002.readTypes_missing/load.stderr
235/426 Test #366: Test_002.readTypes_missing .............................   Passed    0.07 sec
test 367
        Start 367: Test_002.readTypes_missing-sa-hot

367: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_missing-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --read1PairFiles=input/001.R1.fastq"
367: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
367: Test timeout computed to be: 1500
367: running 002.readTypes_missing-sa-hot
367: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --read1PairFiles=input/001.R1.fastq 1>./actual/002.readTypes_missing-sa-hot/load.stdout 2>./actual/002.readTypes_missing-sa-hot/load.stderr
236/426 Test #367: Test_002.readTypes_missing-sa-hot ......................   Passed    0.14 sec
test 368
        Start 368: Test_002.readTypes_missing-sa-cold

368: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_missing-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --read1PairFiles=input/001.R1.fastq"
368: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
368: Test timeout computed to be: 1500
368: running 002.readTypes_missing-sa-cold
368: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --read1PairFiles=input/001.R1.fastq 1>./actual/002.readTypes_missing-sa-cold/load.stdout 2>./actual/002.readTypes_missing-sa-cold/load.stderr
237/426 Test #368: Test_002.readTypes_missing-sa-cold .....................   Passed    0.14 sec
test 369
        Start 369: Test_002.readTypes_mismatch

369: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_mismatch" "1" "0" "--debug" "--no-timestamp" "--readTypes=TB --read1PairFiles=input/001.R1.fastq"
369: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
369: Test timeout computed to be: 1500
369: running 002.readTypes_mismatch
369: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --readTypes=TB --read1PairFiles=input/001.R1.fastq 1>./actual/002.readTypes_mismatch/load.stdout 2>./actual/002.readTypes_mismatch/load.stderr
238/426 Test #369: Test_002.readTypes_mismatch ............................   Passed    0.22 sec
test 370
        Start 370: Test_002.readTypes_mismatch-sa-hot

370: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_mismatch-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --readTypes=TB --read1PairFiles=input/001.R1.fastq"
370: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
370: Test timeout computed to be: 1500
370: running 002.readTypes_mismatch-sa-hot
370: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --readTypes=TB --read1PairFiles=input/001.R1.fastq 1>./actual/002.readTypes_mismatch-sa-hot/load.stdout 2>./actual/002.readTypes_mismatch-sa-hot/load.stderr
239/426 Test #370: Test_002.readTypes_mismatch-sa-hot .....................   Passed    0.18 sec
test 371
        Start 371: Test_002.readTypes_mismatch-sa-cold

371: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_mismatch-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --readTypes=TB --read1PairFiles=input/001.R1.fastq"
371: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
371: Test timeout computed to be: 1500
371: running 002.readTypes_mismatch-sa-cold
371: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --readTypes=TB --read1PairFiles=input/001.R1.fastq 1>./actual/002.readTypes_mismatch-sa-cold/load.stdout 2>./actual/002.readTypes_mismatch-sa-cold/load.stderr
240/426 Test #371: Test_002.readTypes_mismatch-sa-cold ....................   Passed    0.12 sec
test 372
        Start 372: Test_002.readTypes_unexpected

372: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_unexpected" "1" "0" "--debug" "--no-timestamp" "--readTypes=X --read1PairFiles=input/002.allBiological_1.fq"
372: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
372: Test timeout computed to be: 1500
372: running 002.readTypes_unexpected
372: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --readTypes=X --read1PairFiles=input/002.allBiological_1.fq 1>./actual/002.readTypes_unexpected/load.stdout 2>./actual/002.readTypes_unexpected/load.stderr
241/426 Test #372: Test_002.readTypes_unexpected ..........................   Passed    0.13 sec
test 373
        Start 373: Test_002.readTypes_unexpected-sa-hot

373: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_unexpected-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --readTypes=X --read1PairFiles=input/002.allBiological_1.fq"
373: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
373: Test timeout computed to be: 1500
373: running 002.readTypes_unexpected-sa-hot
373: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --readTypes=X --read1PairFiles=input/002.allBiological_1.fq 1>./actual/002.readTypes_unexpected-sa-hot/load.stdout 2>./actual/002.readTypes_unexpected-sa-hot/load.stderr
242/426 Test #373: Test_002.readTypes_unexpected-sa-hot ...................   Passed    0.10 sec
test 374
        Start 374: Test_002.readTypes_unexpected-sa-cold

374: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_unexpected-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --readTypes=X --read1PairFiles=input/002.allBiological_1.fq"
374: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
374: Test timeout computed to be: 1500
374: running 002.readTypes_unexpected-sa-cold
374: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --readTypes=X --read1PairFiles=input/002.allBiological_1.fq 1>./actual/002.readTypes_unexpected-sa-cold/load.stdout 2>./actual/002.readTypes_unexpected-sa-cold/load.stderr
243/426 Test #374: Test_002.readTypes_unexpected-sa-cold ..................   Passed    0.18 sec
test 375
        Start 375: Test_002.readTypes_interlaved_fail_1

375: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_interlaved_fail_1" "1" "0" "--debug" "--no-timestamp" "input/002.readTypes_interleaved_1.fq input/002.readTypes_interleaved_2.fq"
375: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
375: Test timeout computed to be: 1500
375: running 002.readTypes_interlaved_fail_1
375: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp input/002.readTypes_interleaved_1.fq input/002.readTypes_interleaved_2.fq 1>./actual/002.readTypes_interlaved_fail_1/load.stdout 2>./actual/002.readTypes_interlaved_fail_1/load.stderr
244/426 Test #375: Test_002.readTypes_interlaved_fail_1 ...................   Passed    0.16 sec
test 376
        Start 376: Test_002.readTypes_interleaved_fail_4

376: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_interleaved_fail_4" "1" "0" "--debug" "--no-timestamp" "--readTypes=BB input/002.readTypes_interleaved_1.fq input/002.readTypes_interleaved_2.fq"
376: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
376: Test timeout computed to be: 1500
376: running 002.readTypes_interleaved_fail_4
376: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --readTypes=BB input/002.readTypes_interleaved_1.fq input/002.readTypes_interleaved_2.fq 1>./actual/002.readTypes_interleaved_fail_4/load.stdout 2>./actual/002.readTypes_interleaved_fail_4/load.stderr
245/426 Test #376: Test_002.readTypes_interleaved_fail_4 ..................   Passed    0.13 sec
test 377
        Start 377: Test_002.readTypes_interlaved_fail_3-sa-hot

377: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_interlaved_fail_3-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly input/002.readTypes_interleaved_1.fq input/002.readTypes_interleaved_2.fq"
377: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
377: Test timeout computed to be: 1500
377: running 002.readTypes_interlaved_fail_3-sa-hot
377: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly input/002.readTypes_interleaved_1.fq input/002.readTypes_interleaved_2.fq 1>./actual/002.readTypes_interlaved_fail_3-sa-hot/load.stdout 2>./actual/002.readTypes_interlaved_fail_3-sa-hot/load.stderr
246/426 Test #377: Test_002.readTypes_interlaved_fail_3-sa-hot ............   Passed    0.59 sec
test 378
        Start 378: Test_002.readTypes_interlaved_fail_3-sa-cold

378: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_interlaved_fail_3-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 input/002.readTypes_interleaved_1.fq input/002.readTypes_interleaved_2.fq"
378: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
378: Test timeout computed to be: 1500
378: running 002.readTypes_interlaved_fail_3-sa-cold
378: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 input/002.readTypes_interleaved_1.fq input/002.readTypes_interleaved_2.fq 1>./actual/002.readTypes_interlaved_fail_3-sa-cold/load.stdout 2>./actual/002.readTypes_interlaved_fail_3-sa-cold/load.stderr
247/426 Test #378: Test_002.readTypes_interlaved_fail_3-sa-cold ...........   Passed    0.57 sec
test 379
        Start 379: Test_002.readTypes_interlaved_fail_2-sa-hot

379: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_interlaved_fail_2-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --readTypes=BB input/002.readTypes_interleaved_1.fq input/002.readTypes_interleaved_2.fq"
379: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
379: Test timeout computed to be: 1500
379: running 002.readTypes_interlaved_fail_2-sa-hot
379: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --readTypes=BB input/002.readTypes_interleaved_1.fq input/002.readTypes_interleaved_2.fq 1>./actual/002.readTypes_interlaved_fail_2-sa-hot/load.stdout 2>./actual/002.readTypes_interlaved_fail_2-sa-hot/load.stderr
248/426 Test #379: Test_002.readTypes_interlaved_fail_2-sa-hot ............   Passed    0.59 sec
test 380
        Start 380: Test_002.readTypes_interlaved_fail_2-sa-cold

380: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_interlaved_fail_2-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --readTypes=BB input/002.readTypes_interleaved_1.fq input/002.readTypes_interleaved_2.fq"
380: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
380: Test timeout computed to be: 1500
380: running 002.readTypes_interlaved_fail_2-sa-cold
380: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --readTypes=BB input/002.readTypes_interleaved_1.fq input/002.readTypes_interleaved_2.fq 1>./actual/002.readTypes_interlaved_fail_2-sa-cold/load.stdout 2>./actual/002.readTypes_interlaved_fail_2-sa-cold/load.stderr
249/426 Test #380: Test_002.readTypes_interlaved_fail_2-sa-cold ...........   Passed    0.64 sec
test 381
        Start 381: Test_002.readTypes_interlaved_pass

381: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_interlaved_pass" "0" "0" "--debug" "--no-timestamp" "--readTypes=BTB input/002.readTypes_interleaved_1.fq input/002.readTypes_interleaved_2.fq"
381: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
381: Test timeout computed to be: 1500
381: running 002.readTypes_interlaved_pass
381: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --readTypes=BTB input/002.readTypes_interleaved_1.fq input/002.readTypes_interleaved_2.fq 1>./actual/002.readTypes_interlaved_pass/load.stdout 2>./actual/002.readTypes_interlaved_pass/load.stderr
250/426 Test #381: Test_002.readTypes_interlaved_pass .....................   Passed    0.45 sec
test 382
        Start 382: Test_002.readTypes_interlaved_pass-sa-hot

382: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_interlaved_pass-sa-hot" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --readTypes=BTB input/002.readTypes_interleaved_1.fq input/002.readTypes_interleaved_2.fq"
382: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
382: Test timeout computed to be: 1500
382: running 002.readTypes_interlaved_pass-sa-hot
382: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --readTypes=BTB input/002.readTypes_interleaved_1.fq input/002.readTypes_interleaved_2.fq 1>./actual/002.readTypes_interlaved_pass-sa-hot/load.stdout 2>./actual/002.readTypes_interlaved_pass-sa-hot/load.stderr
251/426 Test #382: Test_002.readTypes_interlaved_pass-sa-hot ..............   Passed    0.64 sec
test 383
        Start 383: Test_002.readTypes_interlaved_pass-sa-cold

383: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "002.readTypes_interlaved_pass-sa-cold" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --readTypes=BTB input/002.readTypes_interleaved_1.fq input/002.readTypes_interleaved_2.fq"
383: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
383: Test timeout computed to be: 1500
383: running 002.readTypes_interlaved_pass-sa-cold
383: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --readTypes=BTB input/002.readTypes_interleaved_1.fq input/002.readTypes_interleaved_2.fq 1>./actual/002.readTypes_interlaved_pass-sa-cold/load.stdout 2>./actual/002.readTypes_interlaved_pass-sa-cold/load.stderr
252/426 Test #383: Test_002.readTypes_interlaved_pass-sa-cold .............   Passed    0.77 sec
test 384
        Start 384: Test_003.files_not_exists

384: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "003.files_not_exists" "1" "0" "--debug" "--no-timestamp" "dummy1.fq"
384: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
384: Test timeout computed to be: 1500
384: running 003.files_not_exists
384: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp dummy1.fq 1>./actual/003.files_not_exists/load.stdout 2>./actual/003.files_not_exists/load.stderr
253/426 Test #384: Test_003.files_not_exists ..............................   Passed    0.12 sec
test 385
        Start 385: Test_003.files_not_exists-sa-hot

385: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "003.files_not_exists-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly dummy1.fq"
385: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
385: Test timeout computed to be: 1500
385: running 003.files_not_exists-sa-hot
385: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly dummy1.fq 1>./actual/003.files_not_exists-sa-hot/load.stdout 2>./actual/003.files_not_exists-sa-hot/load.stderr
254/426 Test #385: Test_003.files_not_exists-sa-hot .......................   Passed    0.11 sec
test 386
        Start 386: Test_003.files_not_exists-sa-cold

386: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "003.files_not_exists-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 dummy1.fq"
386: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
386: Test timeout computed to be: 1500
386: running 003.files_not_exists-sa-cold
386: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 dummy1.fq 1>./actual/003.files_not_exists-sa-cold/load.stdout 2>./actual/003.files_not_exists-sa-cold/load.stderr
255/426 Test #386: Test_003.files_not_exists-sa-cold ......................   Passed    0.13 sec
test 387
        Start 387: Test_003.files_not_valid

387: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "003.files_not_valid" "1" "0" "--debug" "--no-timestamp" "input/003.empty.fq"
387: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
387: Test timeout computed to be: 1500
387: running 003.files_not_valid
387: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp input/003.empty.fq 1>./actual/003.files_not_valid/load.stdout 2>./actual/003.files_not_valid/load.stderr
256/426 Test #387: Test_003.files_not_valid ...............................   Passed    0.14 sec
test 388
        Start 388: Test_003.files_not_valid-sa-hot

388: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "003.files_not_valid-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly input/003.empty.fq"
388: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
388: Test timeout computed to be: 1500
388: running 003.files_not_valid-sa-hot
388: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly input/003.empty.fq 1>./actual/003.files_not_valid-sa-hot/load.stdout 2>./actual/003.files_not_valid-sa-hot/load.stderr
257/426 Test #388: Test_003.files_not_valid-sa-hot ........................   Passed    0.13 sec
test 389
        Start 389: Test_003.files_not_valid-sa-cold

389: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "003.files_not_valid-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 input/003.empty.fq"
389: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
389: Test timeout computed to be: 1500
389: running 003.files_not_valid-sa-cold
389: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 input/003.empty.fq 1>./actual/003.files_not_valid-sa-cold/load.stdout 2>./actual/003.files_not_valid-sa-cold/load.stderr
258/426 Test #389: Test_003.files_not_valid-sa-cold .......................   Passed    0.15 sec
test 390
        Start 390: Test_003.files_readpairs

390: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "003.files_readpairs" "0" "0" "--debug" "--no-timestamp" "--readTypes=BBT --read1PairFiles=input/003.t_R1.fastq.gz,input/003.t2_R1.fastq,input/003.t3_R1.fastq --read2PairFiles=input/003.t_R2.fastq.gz,input/003.t2_R2.fastq,input/003.t3_R2.fastq --read3PairFiles=input/003.t_I1.fastq.gz,input/003.t2_I1.fastq,input/003.t3_I1.fastq"
390: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
390: Test timeout computed to be: 1500
390: running 003.files_readpairs
390: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --readTypes=BBT --read1PairFiles=input/003.t_R1.fastq.gz,input/003.t2_R1.fastq,input/003.t3_R1.fastq --read2PairFiles=input/003.t_R2.fastq.gz,input/003.t2_R2.fastq,input/003.t3_R2.fastq --read3PairFiles=input/003.t_I1.fastq.gz,input/003.t2_I1.fastq,input/003.t3_I1.fastq 1>./actual/003.files_readpairs/load.stdout 2>./actual/003.files_readpairs/load.stderr
259/426 Test #390: Test_003.files_readpairs ...............................   Passed    1.50 sec
test 391
        Start 391: Test_003.files_readpairs-sa-hot

391: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "003.files_readpairs-sa-hot" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --readTypes=BBT --read1PairFiles=input/003.t_R1.fastq.gz,input/003.t2_R1.fastq,input/003.t3_R1.fastq --read2PairFiles=input/003.t_R2.fastq.gz,input/003.t2_R2.fastq,input/003.t3_R2.fastq --read3PairFiles=input/003.t_I1.fastq.gz,input/003.t2_I1.fastq,input/003.t3_I1.fastq"
391: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
391: Test timeout computed to be: 1500
391: running 003.files_readpairs-sa-hot
391: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --readTypes=BBT --read1PairFiles=input/003.t_R1.fastq.gz,input/003.t2_R1.fastq,input/003.t3_R1.fastq --read2PairFiles=input/003.t_R2.fastq.gz,input/003.t2_R2.fastq,input/003.t3_R2.fastq --read3PairFiles=input/003.t_I1.fastq.gz,input/003.t2_I1.fastq,input/003.t3_I1.fastq 1>./actual/003.files_readpairs-sa-hot/load.stdout 2>./actual/003.files_readpairs-sa-hot/load.stderr
260/426 Test #391: Test_003.files_readpairs-sa-hot ........................   Passed    2.64 sec
test 392
        Start 392: Test_003.files_readpairs-sa-cold

392: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "003.files_readpairs-sa-cold" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --readTypes=BBT --read1PairFiles=input/003.t_R1.fastq.gz,input/003.t2_R1.fastq,input/003.t3_R1.fastq --read2PairFiles=input/003.t_R2.fastq.gz,input/003.t2_R2.fastq,input/003.t3_R2.fastq --read3PairFiles=input/003.t_I1.fastq.gz,input/003.t2_I1.fastq,input/003.t3_I1.fastq"
392: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
392: Test timeout computed to be: 1500
392: running 003.files_readpairs-sa-cold
392: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --readTypes=BBT --read1PairFiles=input/003.t_R1.fastq.gz,input/003.t2_R1.fastq,input/003.t3_R1.fastq --read2PairFiles=input/003.t_R2.fastq.gz,input/003.t2_R2.fastq,input/003.t3_R2.fastq --read3PairFiles=input/003.t_I1.fastq.gz,input/003.t2_I1.fastq,input/003.t3_I1.fastq 1>./actual/003.files_readpairs-sa-cold/load.stdout 2>./actual/003.files_readpairs-sa-cold/load.stderr
261/426 Test #392: Test_003.files_readpairs-sa-cold .......................   Passed    2.72 sec
test 393
        Start 393: Test_003.files_mixed

393: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "003.files_mixed" "1" "0" "--debug" "--no-timestamp" "input/005.offset0_1.fq input/001.R1.fastq"
393: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
393: Test timeout computed to be: 1500
393: running 003.files_mixed
393: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp input/005.offset0_1.fq input/001.R1.fastq 1>./actual/003.files_mixed/load.stdout 2>./actual/003.files_mixed/load.stderr
262/426 Test #393: Test_003.files_mixed ...................................   Passed    0.14 sec
test 394
        Start 394: Test_003.files_mixed-sa-hot

394: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "003.files_mixed-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly input/005.offset0_1.fq input/001.R1.fastq"
394: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
394: Test timeout computed to be: 1500
394: running 003.files_mixed-sa-hot
394: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly input/005.offset0_1.fq input/001.R1.fastq 1>./actual/003.files_mixed-sa-hot/load.stdout 2>./actual/003.files_mixed-sa-hot/load.stderr
263/426 Test #394: Test_003.files_mixed-sa-hot ............................   Passed    0.15 sec
test 395
        Start 395: Test_003.files_mixed-sa-cold

395: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "003.files_mixed-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 input/005.offset0_1.fq input/001.R1.fastq"
395: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
395: Test timeout computed to be: 1500
395: running 003.files_mixed-sa-cold
395: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 input/005.offset0_1.fq input/001.R1.fastq 1>./actual/003.files_mixed-sa-cold/load.stdout 2>./actual/003.files_mixed-sa-cold/load.stderr
264/426 Test #395: Test_003.files_mixed-sa-cold ...........................   Passed    0.14 sec
test 396
        Start 396: Test_003.files_mixed_cluster

396: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "003.files_mixed_cluster" "1" "0" "--debug" "--no-timestamp" "input/003.t_R1.fastq input/003.t_I1.fastq input/001.R1.fastq"
396: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
396: Test timeout computed to be: 1500
396: running 003.files_mixed_cluster
396: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp input/003.t_R1.fastq input/003.t_I1.fastq input/001.R1.fastq 1>./actual/003.files_mixed_cluster/load.stdout 2>./actual/003.files_mixed_cluster/load.stderr
265/426 Test #396: Test_003.files_mixed_cluster ...........................   Passed    0.09 sec
test 397
        Start 397: Test_003.files_10x_mixed

397: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "003.files_10x_mixed" "1" "0" "--debug" "--no-timestamp" "input/003.t_I1.fastq input/003.t_R1.fastq input/003.t_R2.fastq input/003._I1.fastq input/003.R1.fastq input/003.R2.fastq"
397: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
397: Test timeout computed to be: 1500
397: running 003.files_10x_mixed
397: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp input/003.t_I1.fastq input/003.t_R1.fastq input/003.t_R2.fastq input/003._I1.fastq input/003.R1.fastq input/003.R2.fastq 1>./actual/003.files_10x_mixed/load.stdout 2>./actual/003.files_10x_mixed/load.stderr
266/426 Test #397: Test_003.files_10x_mixed ...............................   Passed    0.05 sec
test 398
        Start 398: Test_003.files_10x_mixed-sa-hot

398: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "003.files_10x_mixed-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly input/003.t_I1.fastq input/003.t_R1.fastq input/003.t_R2.fastq input/003._I1.fastq input/003.R1.fastq input/003.R2.fastq"
398: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
398: Test timeout computed to be: 1500
398: running 003.files_10x_mixed-sa-hot
398: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly input/003.t_I1.fastq input/003.t_R1.fastq input/003.t_R2.fastq input/003._I1.fastq input/003.R1.fastq input/003.R2.fastq 1>./actual/003.files_10x_mixed-sa-hot/load.stdout 2>./actual/003.files_10x_mixed-sa-hot/load.stderr
267/426 Test #398: Test_003.files_10x_mixed-sa-hot ........................   Passed    0.03 sec
test 399
        Start 399: Test_003.files_10x_mixed-sa-cold

399: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "003.files_10x_mixed-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 input/003.t_I1.fastq input/003.t_R1.fastq input/003.t_R2.fastq input/003._I1.fastq input/003.R1.fastq input/003.R2.fastq"
399: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
399: Test timeout computed to be: 1500
399: running 003.files_10x_mixed-sa-cold
399: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 input/003.t_I1.fastq input/003.t_R1.fastq input/003.t_R2.fastq input/003._I1.fastq input/003.R1.fastq input/003.R2.fastq 1>./actual/003.files_10x_mixed-sa-cold/load.stdout 2>./actual/003.files_10x_mixed-sa-cold/load.stderr
268/426 Test #399: Test_003.files_10x_mixed-sa-cold .......................   Passed    0.03 sec
test 400
        Start 400: Test_003.readTypes_10x

400: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "003.readTypes_10x" "0" "0" "--debug" "--no-timestamp" "input/003.t_R1.fastq input/003.t_R1.fastq input/003.t_I1.fastq"
400: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
400: Test timeout computed to be: 1500
400: running 003.readTypes_10x
400: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp input/003.t_R1.fastq input/003.t_R1.fastq input/003.t_I1.fastq 1>./actual/003.readTypes_10x/load.stdout 2>./actual/003.readTypes_10x/load.stderr
269/426 Test #400: Test_003.readTypes_10x .................................   Passed    0.49 sec
test 401
        Start 401: Test_003.wrong_pairing

401: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "003.wrong_pairing" "1" "0" "--debug" "--no-timestamp" "--readTypes=BBT --read1PairFiles=input/003.t_R1.fastq.gz,input/003.t2_R1.fastq,input/003.t3_R1.fastq --read2PairFiles=input/003.t_R2.fastq.gz,input/003.t2_R2.fastq --read3PairFiles=input/003.t_I1.fastq.gz,input/003.t2_I1.fastq,input/003.t3_I1.fastq"
401: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
401: Test timeout computed to be: 1500
401: running 003.wrong_pairing
401: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --readTypes=BBT --read1PairFiles=input/003.t_R1.fastq.gz,input/003.t2_R1.fastq,input/003.t3_R1.fastq --read2PairFiles=input/003.t_R2.fastq.gz,input/003.t2_R2.fastq --read3PairFiles=input/003.t_I1.fastq.gz,input/003.t2_I1.fastq,input/003.t3_I1.fastq 1>./actual/003.wrong_pairing/load.stdout 2>./actual/003.wrong_pairing/load.stderr
270/426 Test #401: Test_003.wrong_pairing .................................   Passed    0.13 sec
test 402
        Start 402: Test_003.wrong_pairing-sa-hot

402: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "003.wrong_pairing-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --readTypes=BBT --read1PairFiles=input/003.t_R1.fastq.gz,input/003.t2_R1.fastq,input/003.t3_R1.fastq --read2PairFiles=input/003.t_R2.fastq.gz,input/003.t2_R2.fastq --read3PairFiles=input/003.t_I1.fastq.gz,input/003.t2_I1.fastq,input/003.t3_I1.fastq"
402: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
402: Test timeout computed to be: 1500
402: running 003.wrong_pairing-sa-hot
402: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --readTypes=BBT --read1PairFiles=input/003.t_R1.fastq.gz,input/003.t2_R1.fastq,input/003.t3_R1.fastq --read2PairFiles=input/003.t_R2.fastq.gz,input/003.t2_R2.fastq --read3PairFiles=input/003.t_I1.fastq.gz,input/003.t2_I1.fastq,input/003.t3_I1.fastq 1>./actual/003.wrong_pairing-sa-hot/load.stdout 2>./actual/003.wrong_pairing-sa-hot/load.stderr
271/426 Test #402: Test_003.wrong_pairing-sa-hot ..........................   Passed    0.13 sec
test 403
        Start 403: Test_003.wrong_pairing-sa-cold

403: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "003.wrong_pairing-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --readTypes=BBT --read1PairFiles=input/003.t_R1.fastq.gz,input/003.t2_R1.fastq,input/003.t3_R1.fastq --read2PairFiles=input/003.t_R2.fastq.gz,input/003.t2_R2.fastq --read3PairFiles=input/003.t_I1.fastq.gz,input/003.t2_I1.fastq,input/003.t3_I1.fastq"
403: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
403: Test timeout computed to be: 1500
403: running 003.wrong_pairing-sa-cold
403: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --readTypes=BBT --read1PairFiles=input/003.t_R1.fastq.gz,input/003.t2_R1.fastq,input/003.t3_R1.fastq --read2PairFiles=input/003.t_R2.fastq.gz,input/003.t2_R2.fastq --read3PairFiles=input/003.t_I1.fastq.gz,input/003.t2_I1.fastq,input/003.t3_I1.fastq 1>./actual/003.wrong_pairing-sa-cold/load.stdout 2>./actual/003.wrong_pairing-sa-cold/load.stderr
272/426 Test #403: Test_003.wrong_pairing-sa-cold .........................   Passed    0.11 sec
test 404
        Start 404: Test_004.truncated.fail

404: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "004.truncated.fail" "1" "0" "--debug" "--no-timestamp" "input/004.truncated_1.fq.gz input/004.truncated_2.fq.gz"
404: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
404: Test timeout computed to be: 1500
404: running 004.truncated.fail
404: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp input/004.truncated_1.fq.gz input/004.truncated_2.fq.gz 1>./actual/004.truncated.fail/load.stdout 2>./actual/004.truncated.fail/load.stderr
273/426 Test #404: Test_004.truncated.fail ................................   Passed    1.10 sec
test 405
        Start 405: Test_004.truncated.pass

405: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "004.truncated.pass" "0" "0" "--debug" "--no-timestamp" "--allowEarlyFileEnd input/004.truncated_1.fq.gz input/004.truncated_2.fq.gz"
405: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
405: Test timeout computed to be: 1500
405: running 004.truncated.pass
405: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --allowEarlyFileEnd input/004.truncated_1.fq.gz input/004.truncated_2.fq.gz 1>./actual/004.truncated.pass/load.stdout 2>./actual/004.truncated.pass/load.stderr
274/426 Test #405: Test_004.truncated.pass ................................   Passed    2.25 sec
test 406
        Start 406: Test_004.truncated.pass-sa-hot

406: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "004.truncated.pass-sa-hot" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --allowEarlyFileEnd input/004.truncated_1.fq.gz input/004.truncated_2.fq.gz"
406: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
406: Test timeout computed to be: 1500
406: running 004.truncated.pass-sa-hot
406: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --allowEarlyFileEnd input/004.truncated_1.fq.gz input/004.truncated_2.fq.gz 1>./actual/004.truncated.pass-sa-hot/load.stdout 2>./actual/004.truncated.pass-sa-hot/load.stderr
275/426 Test #406: Test_004.truncated.pass-sa-hot .........................   Passed    2.10 sec
test 407
        Start 407: Test_004.truncated.pass-sa-cold

407: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "004.truncated.pass-sa-cold" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --allowEarlyFileEnd input/004.truncated_1.fq.gz input/004.truncated_2.fq.gz"
407: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
407: Test timeout computed to be: 1500
407: running 004.truncated.pass-sa-cold
407: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --allowEarlyFileEnd input/004.truncated_1.fq.gz input/004.truncated_2.fq.gz 1>./actual/004.truncated.pass-sa-cold/load.stdout 2>./actual/004.truncated.pass-sa-cold/load.stderr
276/426 Test #407: Test_004.truncated.pass-sa-cold ........................   Passed    2.23 sec
test 408
        Start 408: Test_005.offset0

408: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "005.offset0" "0" "0" "--debug" "--no-timestamp" "input/005.offset0_1.fq input/005.offset0_2.fq"
408: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
408: Test timeout computed to be: 1500
408: running 005.offset0
408: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp input/005.offset0_1.fq input/005.offset0_2.fq 1>./actual/005.offset0/load.stdout 2>./actual/005.offset0/load.stderr
277/426 Test #408: Test_005.offset0 .......................................   Passed    0.47 sec
test 409
        Start 409: Test_005.offset0-sa-hot

409: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "005.offset0-sa-hot" "0" "0" "--debug" "--no-timestamp" "--spot-assembly input/005.offset0_1.fq input/005.offset0_2.fq"
409: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
409: Test timeout computed to be: 1500
409: running 005.offset0-sa-hot
409: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly input/005.offset0_1.fq input/005.offset0_2.fq 1>./actual/005.offset0-sa-hot/load.stdout 2>./actual/005.offset0-sa-hot/load.stderr
278/426 Test #409: Test_005.offset0-sa-hot ................................   Passed    0.76 sec
test 410
        Start 410: Test_005.offset0-sa-cold

410: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "005.offset0-sa-cold" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 input/005.offset0_1.fq input/005.offset0_2.fq"
410: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
410: Test timeout computed to be: 1500
410: running 005.offset0-sa-cold
410: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 input/005.offset0_1.fq input/005.offset0_2.fq 1>./actual/005.offset0-sa-cold/load.stdout 2>./actual/005.offset0-sa-cold/load.stderr
279/426 Test #410: Test_005.offset0-sa-cold ...............................   Passed    0.66 sec
test 411
        Start 411: Test_005.offset64

411: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "005.offset64" "0" "0" "--debug" "--no-timestamp" "input/005.offset64_1.fq input/005.offset64_2.fq"
411: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
411: Test timeout computed to be: 1500
411: running 005.offset64
411: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp input/005.offset64_1.fq input/005.offset64_2.fq 1>./actual/005.offset64/load.stdout 2>./actual/005.offset64/load.stderr
280/426 Test #411: Test_005.offset64 ......................................   Passed    0.47 sec
test 412
        Start 412: Test_005.offset64-sa-hot

412: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "005.offset64-sa-hot" "0" "0" "--debug" "--no-timestamp" "--spot-assembly input/005.offset64_1.fq input/005.offset64_2.fq"
412: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
412: Test timeout computed to be: 1500
412: running 005.offset64-sa-hot
412: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly input/005.offset64_1.fq input/005.offset64_2.fq 1>./actual/005.offset64-sa-hot/load.stdout 2>./actual/005.offset64-sa-hot/load.stderr
281/426 Test #412: Test_005.offset64-sa-hot ...............................   Passed    0.60 sec
test 413
        Start 413: Test_005.offset64-sa-cold

413: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "005.offset64-sa-cold" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 input/005.offset64_1.fq input/005.offset64_2.fq"
413: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
413: Test timeout computed to be: 1500
413: running 005.offset64-sa-cold
413: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 input/005.offset64_1.fq input/005.offset64_2.fq 1>./actual/005.offset64-sa-cold/load.stdout 2>./actual/005.offset64-sa-cold/load.stderr
282/426 Test #413: Test_005.offset64-sa-cold ..............................   Passed    0.68 sec
test 414
        Start 414: Test_006.duplicate

414: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "006.duplicate" "1" "0" "--debug" "--no-timestamp" "--max-err-count 0 input/006.duplicate.fq"
414: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
414: Test timeout computed to be: 1500
414: running 006.duplicate
414: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --max-err-count 0 input/006.duplicate.fq 1>./actual/006.duplicate/load.stdout 2>./actual/006.duplicate/load.stderr
283/426 Test #414: Test_006.duplicate .....................................   Passed    0.38 sec
test 415
        Start 415: Test_007.digest.udenfined

415: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "007.digest.udenfined" "0" "0" "--debug" "--no-timestamp" "--digest input/001.read.unsupported.fq"
415: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
415: Test timeout computed to be: 1500
415: running 007.digest.udenfined
415: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --digest input/001.read.unsupported.fq 1>./actual/007.digest.udenfined/load.stdout 2>./actual/007.digest.udenfined/load.stderr
284/426 Test #415: Test_007.digest.udenfined ..............................   Passed    0.10 sec
test 416
        Start 416: Test_007.digest.udenfined-sa-hot

416: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "007.digest.udenfined-sa-hot" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --digest input/001.read.unsupported.fq"
416: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
416: Test timeout computed to be: 1500
416: running 007.digest.udenfined-sa-hot
416: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --digest input/001.read.unsupported.fq 1>./actual/007.digest.udenfined-sa-hot/load.stdout 2>./actual/007.digest.udenfined-sa-hot/load.stderr
285/426 Test #416: Test_007.digest.udenfined-sa-hot .......................   Passed    0.09 sec
test 417
        Start 417: Test_007.digest.udenfined-sa-cold

417: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "007.digest.udenfined-sa-cold" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --digest input/001.read.unsupported.fq"
417: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
417: Test timeout computed to be: 1500
417: running 007.digest.udenfined-sa-cold
417: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --digest input/001.read.unsupported.fq 1>./actual/007.digest.udenfined-sa-cold/load.stdout 2>./actual/007.digest.udenfined-sa-cold/load.stderr
286/426 Test #417: Test_007.digest.udenfined-sa-cold ......................   Passed    0.10 sec
test 418
        Start 418: Test_007.digest.multiple

418: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "007.digest.multiple" "0" "0" "--debug" "--no-timestamp" "--digest input/003.t_R1.fastq input/003.t_R1.fastq input/003.t_I1.fastq"
418: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
418: Test timeout computed to be: 1500
418: running 007.digest.multiple
418: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --digest input/003.t_R1.fastq input/003.t_R1.fastq input/003.t_I1.fastq 1>./actual/007.digest.multiple/load.stdout 2>./actual/007.digest.multiple/load.stderr
287/426 Test #418: Test_007.digest.multiple ...............................   Passed    0.12 sec
test 419
        Start 419: Test_007.digest.multiple-sa-hot

419: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "007.digest.multiple-sa-hot" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --digest input/003.t_R1.fastq input/003.t_R1.fastq input/003.t_I1.fastq"
419: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
419: Test timeout computed to be: 1500
419: running 007.digest.multiple-sa-hot
419: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --digest input/003.t_R1.fastq input/003.t_R1.fastq input/003.t_I1.fastq 1>./actual/007.digest.multiple-sa-hot/load.stdout 2>./actual/007.digest.multiple-sa-hot/load.stderr
288/426 Test #419: Test_007.digest.multiple-sa-hot ........................   Passed    0.11 sec
test 420
        Start 420: Test_007.digest.multiple-sa-cold

420: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "007.digest.multiple-sa-cold" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --digest input/003.t_R1.fastq input/003.t_R1.fastq input/003.t_I1.fastq"
420: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
420: Test timeout computed to be: 1500
420: running 007.digest.multiple-sa-cold
420: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --digest input/003.t_R1.fastq input/003.t_R1.fastq input/003.t_I1.fastq 1>./actual/007.digest.multiple-sa-cold/load.stdout 2>./actual/007.digest.multiple-sa-cold/load.stderr
289/426 Test #420: Test_007.digest.multiple-sa-cold .......................   Passed    0.11 sec
test 421
        Start 421: Test_007.digest.groups

421: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "007.digest.groups" "0" "0" "--debug" "--no-timestamp" "--digest input/003.t_R1.fastq.gz input/003.t2_R1.fastq input/003.t3_R1.fastq input/003.t_R2.fastq.gz input/003.t2_R2.fastq input/003.t3_R2.fastq input/003.t_I1.fastq.gz input/003.t2_I1.fastq input/003.t3_I1.fastq"
421: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
421: Test timeout computed to be: 1500
421: running 007.digest.groups
421: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --digest input/003.t_R1.fastq.gz input/003.t2_R1.fastq input/003.t3_R1.fastq input/003.t_R2.fastq.gz input/003.t2_R2.fastq input/003.t3_R2.fastq input/003.t_I1.fastq.gz input/003.t2_I1.fastq input/003.t3_I1.fastq 1>./actual/007.digest.groups/load.stdout 2>./actual/007.digest.groups/load.stderr
290/426 Test #421: Test_007.digest.groups .................................   Passed    0.21 sec
test 422
        Start 422: Test_007.digest.error

422: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "007.digest.error" "0" "0" "--debug" "--no-timestamp" "--max-err-count 0 --digest input/001.read.invalid_quality0.fq"
422: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
422: Test timeout computed to be: 1500
422: running 007.digest.error
422: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --max-err-count 0 --digest input/001.read.invalid_quality0.fq 1>./actual/007.digest.error/load.stdout 2>./actual/007.digest.error/load.stderr
291/426 Test #422: Test_007.digest.error ..................................   Passed    0.11 sec
test 423
        Start 423: Test_007.digest.error-sa-hot

423: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "007.digest.error-sa-hot" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --max-err-count 0 --digest input/001.read.invalid_quality0.fq"
423: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
423: Test timeout computed to be: 1500
423: running 007.digest.error-sa-hot
423: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --max-err-count 0 --digest input/001.read.invalid_quality0.fq 1>./actual/007.digest.error-sa-hot/load.stdout 2>./actual/007.digest.error-sa-hot/load.stderr
292/426 Test #423: Test_007.digest.error-sa-hot ...........................   Passed    0.11 sec
test 424
        Start 424: Test_007.digest.error-sa-cold

424: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "007.digest.error-sa-cold" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --max-err-count 0 --digest input/001.read.invalid_quality0.fq"
424: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
424: Test timeout computed to be: 1500
424: running 007.digest.error-sa-cold
424: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --max-err-count 0 --digest input/001.read.invalid_quality0.fq 1>./actual/007.digest.error-sa-cold/load.stdout 2>./actual/007.digest.error-sa-cold/load.stderr
293/426 Test #424: Test_007.digest.error-sa-cold ..........................   Passed    0.11 sec
test 425
        Start 425: Test_008.telemetry_pass

425: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "008.telemetry_pass" "0" "1" "--debug" "--no-timestamp" "--readTypes=BBT --read1PairFiles=input/003.t_R1.fastq.gz,input/003.t2_R1.fastq,input/003.t3_R1.fastq --read2PairFiles=input/003.t_R2.fastq.gz,input/003.t2_R2.fastq,input/003.t3_R2.fastq --read3PairFiles=input/003.t_I1.fastq.gz,input/003.t2_I1.fastq,input/003.t3_I1.fastq"
425: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
425: Test timeout computed to be: 1500
425: running 008.telemetry_pass
425: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --readTypes=BBT --read1PairFiles=input/003.t_R1.fastq.gz,input/003.t2_R1.fastq,input/003.t3_R1.fastq --read2PairFiles=input/003.t_R2.fastq.gz,input/003.t2_R2.fastq,input/003.t3_R2.fastq --read3PairFiles=input/003.t_I1.fastq.gz,input/003.t2_I1.fastq,input/003.t3_I1.fastq -t ./actual/008.telemetry_pass/telemetry 1>./actual/008.telemetry_pass/load.stdout 2>./actual/008.telemetry_pass/load.stderr
294/426 Test #425: Test_008.telemetry_pass ................................   Passed    1.47 sec
test 426
        Start 426: Test_009.more_than_4_per_spot

426: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "009.more_than_4_per_spot" "1" "0" "--debug" "--no-timestamp" "--debug input/009.test_I1_001.fastq input/009.test_R1_001.fastq input/009.test_R2_001.fastq input/009.test_R3_001.fastq"
426: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
426: Test timeout computed to be: 1500
426: running 009.more_than_4_per_spot
426: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --debug input/009.test_I1_001.fastq input/009.test_R1_001.fastq input/009.test_R2_001.fastq input/009.test_R3_001.fastq 1>./actual/009.more_than_4_per_spot/load.stdout 2>./actual/009.more_than_4_per_spot/load.stderr
295/426 Test #426: Test_009.more_than_4_per_spot ..........................   Passed    0.31 sec
test 427
        Start 427: Test_010.errors.invalid_seq_pass1

427: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "010.errors.invalid_seq_pass1" "0" "0" "--debug" "--no-timestamp" "input/010.errors.invalid_seq.fq"
427: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
427: Test timeout computed to be: 1500
427: running 010.errors.invalid_seq_pass1
427: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp input/010.errors.invalid_seq.fq 1>./actual/010.errors.invalid_seq_pass1/load.stdout 2>./actual/010.errors.invalid_seq_pass1/load.stderr
296/426 Test #427: Test_010.errors.invalid_seq_pass1 ......................   Passed    0.31 sec
test 428
        Start 428: Test_010.errors.invalid_seq_pass1-sa-hot

428: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "010.errors.invalid_seq_pass1-sa-hot" "0" "0" "--debug" "--no-timestamp" "--spot-assembly input/010.errors.invalid_seq.fq"
428: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
428: Test timeout computed to be: 1500
428: running 010.errors.invalid_seq_pass1-sa-hot
428: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly input/010.errors.invalid_seq.fq 1>./actual/010.errors.invalid_seq_pass1-sa-hot/load.stdout 2>./actual/010.errors.invalid_seq_pass1-sa-hot/load.stderr
297/426 Test #428: Test_010.errors.invalid_seq_pass1-sa-hot ...............   Passed    0.41 sec
test 429
        Start 429: Test_010.errors.invalid_seq_pass1-sa-cold

429: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "010.errors.invalid_seq_pass1-sa-cold" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 input/010.errors.invalid_seq.fq"
429: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
429: Test timeout computed to be: 1500
429: running 010.errors.invalid_seq_pass1-sa-cold
429: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 input/010.errors.invalid_seq.fq 1>./actual/010.errors.invalid_seq_pass1-sa-cold/load.stdout 2>./actual/010.errors.invalid_seq_pass1-sa-cold/load.stderr
298/426 Test #429: Test_010.errors.invalid_seq_pass1-sa-cold ..............   Passed    0.48 sec
test 430
        Start 430: Test_010.errors.invalid_seq_pass2

430: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "010.errors.invalid_seq_pass2" "1" "0" "--debug" "--no-timestamp" "--max-err-count 3 input/010.errors.invalid_seq.fq"
430: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
430: Test timeout computed to be: 1500
430: running 010.errors.invalid_seq_pass2
430: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --max-err-count 3 input/010.errors.invalid_seq.fq 1>./actual/010.errors.invalid_seq_pass2/load.stdout 2>./actual/010.errors.invalid_seq_pass2/load.stderr
299/426 Test #430: Test_010.errors.invalid_seq_pass2 ......................   Passed    0.17 sec
test 431
        Start 431: Test_010.errors.invalid_seq_pass2-sa-hot

431: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "010.errors.invalid_seq_pass2-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --max-err-count 3 input/010.errors.invalid_seq.fq"
431: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
431: Test timeout computed to be: 1500
431: running 010.errors.invalid_seq_pass2-sa-hot
431: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --max-err-count 3 input/010.errors.invalid_seq.fq 1>./actual/010.errors.invalid_seq_pass2-sa-hot/load.stdout 2>./actual/010.errors.invalid_seq_pass2-sa-hot/load.stderr
300/426 Test #431: Test_010.errors.invalid_seq_pass2-sa-hot ...............   Passed    0.11 sec
test 432
        Start 432: Test_010.errors.invalid_seq_pass2-sa-cold

432: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "010.errors.invalid_seq_pass2-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --max-err-count 3 input/010.errors.invalid_seq.fq"
432: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
432: Test timeout computed to be: 1500
432: running 010.errors.invalid_seq_pass2-sa-cold
432: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --max-err-count 3 input/010.errors.invalid_seq.fq 1>./actual/010.errors.invalid_seq_pass2-sa-cold/load.stdout 2>./actual/010.errors.invalid_seq_pass2-sa-cold/load.stderr
301/426 Test #432: Test_010.errors.invalid_seq_pass2-sa-cold ..............   Passed    0.16 sec
test 433
        Start 433: Test_010.errors.invalid_seq_fail

433: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "010.errors.invalid_seq_fail" "1" "0" "--debug" "--no-timestamp" "--max-err-count 3 input/010.errors.invalid_seq.fq"
433: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
433: Test timeout computed to be: 1500
433: running 010.errors.invalid_seq_fail
433: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --max-err-count 3 input/010.errors.invalid_seq.fq 1>./actual/010.errors.invalid_seq_fail/load.stdout 2>./actual/010.errors.invalid_seq_fail/load.stderr
302/426 Test #433: Test_010.errors.invalid_seq_fail .......................   Passed    0.13 sec
test 434
        Start 434: Test_010.errors.invalid_seq_fail-sa-hot

434: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "010.errors.invalid_seq_fail-sa-hot" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --max-err-count 3 input/010.errors.invalid_seq.fq"
434: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
434: Test timeout computed to be: 1500
434: running 010.errors.invalid_seq_fail-sa-hot
434: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --max-err-count 3 input/010.errors.invalid_seq.fq 1>./actual/010.errors.invalid_seq_fail-sa-hot/load.stdout 2>./actual/010.errors.invalid_seq_fail-sa-hot/load.stderr
303/426 Test #434: Test_010.errors.invalid_seq_fail-sa-hot ................   Passed    0.12 sec
test 435
        Start 435: Test_010.errors.invalid_seq_fail-sa-cold

435: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "010.errors.invalid_seq_fail-sa-cold" "1" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --max-err-count 3 input/010.errors.invalid_seq.fq"
435: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
435: Test timeout computed to be: 1500
435: running 010.errors.invalid_seq_fail-sa-cold
435: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --max-err-count 3 input/010.errors.invalid_seq.fq 1>./actual/010.errors.invalid_seq_fail-sa-cold/load.stdout 2>./actual/010.errors.invalid_seq_fail-sa-cold/load.stderr
304/426 Test #435: Test_010.errors.invalid_seq_fail-sa-cold ...............   Passed    0.14 sec
test 436
        Start 436: Test_011.nanopore.3

436: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "011.nanopore.3" "0" "0" "--debug" "--no-timestamp" "--max-err-count 0 input/011.nanopore.3.fq"
436: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
436: Test timeout computed to be: 1500
436: running 011.nanopore.3
436: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --max-err-count 0 input/011.nanopore.3.fq 1>./actual/011.nanopore.3/load.stdout 2>./actual/011.nanopore.3/load.stderr
305/426 Test #436: Test_011.nanopore.3 ....................................   Passed    0.35 sec
test 437
        Start 437: Test_011.nanopore.3-sa-hot

437: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "011.nanopore.3-sa-hot" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --max-err-count 0 input/011.nanopore.3.fq"
437: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
437: Test timeout computed to be: 1500
437: running 011.nanopore.3-sa-hot
437: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --max-err-count 0 input/011.nanopore.3.fq 1>./actual/011.nanopore.3-sa-hot/load.stdout 2>./actual/011.nanopore.3-sa-hot/load.stderr
306/426 Test #437: Test_011.nanopore.3-sa-hot .............................   Passed    0.47 sec
test 438
        Start 438: Test_011.nanopore.3-sa-cold

438: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "011.nanopore.3-sa-cold" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/011.nanopore.3.fq"
438: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
438: Test timeout computed to be: 1500
438: running 011.nanopore.3-sa-cold
438: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/011.nanopore.3.fq 1>./actual/011.nanopore.3-sa-cold/load.stdout 2>./actual/011.nanopore.3-sa-cold/load.stderr
307/426 Test #438: Test_011.nanopore.3-sa-cold ............................   Passed    0.44 sec
test 439
        Start 439: Test_012.qualities

439: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "012.qualities" "0" "0" "--debug" "--no-timestamp" "--max-err-count 0 input/012.test_I1_001.fastq input/012.test_R1_001.fastq input/012.test_R2_001.fastq input/012.test2_I1_001.fastq input/012.test2_R1_001.fastq input/012.test2_R2_001.fastq"
439: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
439: Test timeout computed to be: 1500
439: running 012.qualities
439: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --max-err-count 0 input/012.test_I1_001.fastq input/012.test_R1_001.fastq input/012.test_R2_001.fastq input/012.test2_I1_001.fastq input/012.test2_R1_001.fastq input/012.test2_R2_001.fastq 1>./actual/012.qualities/load.stdout 2>./actual/012.qualities/load.stderr
308/426 Test #439: Test_012.qualities .....................................   Passed    1.09 sec
test 440
        Start 440: Test_012.qualities-sa-hot

440: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "012.qualities-sa-hot" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --max-err-count 0 input/012.test_I1_001.fastq input/012.test_R1_001.fastq input/012.test_R2_001.fastq input/012.test2_I1_001.fastq input/012.test2_R1_001.fastq input/012.test2_R2_001.fastq"
440: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
440: Test timeout computed to be: 1500
440: running 012.qualities-sa-hot
440: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --max-err-count 0 input/012.test_I1_001.fastq input/012.test_R1_001.fastq input/012.test_R2_001.fastq input/012.test2_I1_001.fastq input/012.test2_R1_001.fastq input/012.test2_R2_001.fastq 1>./actual/012.qualities-sa-hot/load.stdout 2>./actual/012.qualities-sa-hot/load.stderr
309/426 Test #440: Test_012.qualities-sa-hot ..............................   Passed    1.71 sec
test 441
        Start 441: Test_012.qualities-sa-cold

441: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "012.qualities-sa-cold" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/012.test_I1_001.fastq input/012.test_R1_001.fastq input/012.test_R2_001.fastq input/012.test2_I1_001.fastq input/012.test2_R1_001.fastq input/012.test2_R2_001.fastq"
441: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
441: Test timeout computed to be: 1500
441: running 012.qualities-sa-cold
441: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/012.test_I1_001.fastq input/012.test_R1_001.fastq input/012.test_R2_001.fastq input/012.test2_I1_001.fastq input/012.test2_R1_001.fastq input/012.test2_R2_001.fastq 1>./actual/012.qualities-sa-cold/load.stdout 2>./actual/012.qualities-sa-cold/load.stderr
310/426 Test #441: Test_012.qualities-sa-cold .............................   Passed    1.73 sec
test 442
        Start 442: Test_012.qualities_with_types-sa-hot

442: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "012.qualities_with_types-sa-hot" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --readTypes=TTB input/012.test_I1_001.fastq input/012.test_R1_001.fastq input/012.test_R2_001.fastq input/012.test2_I1_001.fastq input/012.test2_R1_001.fastq input/012.test2_R2_001.fastq"
442: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
442: Test timeout computed to be: 1500
442: running 012.qualities_with_types-sa-hot
442: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --readTypes=TTB input/012.test_I1_001.fastq input/012.test_R1_001.fastq input/012.test_R2_001.fastq input/012.test2_I1_001.fastq input/012.test2_R1_001.fastq input/012.test2_R2_001.fastq 1>./actual/012.qualities_with_types-sa-hot/load.stdout 2>./actual/012.qualities_with_types-sa-hot/load.stderr
311/426 Test #442: Test_012.qualities_with_types-sa-hot ...................   Passed    1.72 sec
test 443
        Start 443: Test_012.qualities_with_types-sa-cold

443: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "012.qualities_with_types-sa-cold" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --readTypes=TTB input/012.test_I1_001.fastq input/012.test_R1_001.fastq input/012.test_R2_001.fastq input/012.test2_I1_001.fastq input/012.test2_R1_001.fastq input/012.test2_R2_001.fastq"
443: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
443: Test timeout computed to be: 1500
443: running 012.qualities_with_types-sa-cold
443: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --readTypes=TTB input/012.test_I1_001.fastq input/012.test_R1_001.fastq input/012.test_R2_001.fastq input/012.test2_I1_001.fastq input/012.test2_R1_001.fastq input/012.test2_R2_001.fastq 1>./actual/012.qualities_with_types-sa-cold/load.stdout 2>./actual/012.qualities_with_types-sa-cold/load.stderr
312/426 Test #443: Test_012.qualities_with_types-sa-cold ..................   Passed    1.73 sec
test 444
        Start 444: Test_013.no-reads

444: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "013.no-reads" "0" "0" "--debug" "--no-timestamp" "--max-err-count 0 input/013.t_I1.fastq input/013.t_I2.fastq input/013.t_R1.fastq input/013.t_R2.fastq"
444: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
444: Test timeout computed to be: 1500
444: running 013.no-reads
444: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --max-err-count 0 input/013.t_I1.fastq input/013.t_I2.fastq input/013.t_R1.fastq input/013.t_R2.fastq 1>./actual/013.no-reads/load.stdout 2>./actual/013.no-reads/load.stderr
313/426 Test #444: Test_013.no-reads ......................................   Passed    9.45 sec
test 445
        Start 445: Test_013.no-reads-sa-hot

445: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "013.no-reads-sa-hot" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --max-err-count 0 input/013.t_I1.fastq input/013.t_I2.fastq input/013.t_R1.fastq input/013.t_R2.fastq"
445: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
445: Test timeout computed to be: 1500
445: running 013.no-reads-sa-hot
445: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --max-err-count 0 input/013.t_I1.fastq input/013.t_I2.fastq input/013.t_R1.fastq input/013.t_R2.fastq 1>./actual/013.no-reads-sa-hot/load.stdout 2>./actual/013.no-reads-sa-hot/load.stderr
314/426 Test #445: Test_013.no-reads-sa-hot ...............................   Passed    9.86 sec
test 446
        Start 446: Test_013.no-reads-sa-cold

446: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "013.no-reads-sa-cold" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/013.t_I1.fastq input/013.t_I2.fastq input/013.t_R1.fastq input/013.t_R2.fastq"
446: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
446: Test timeout computed to be: 1500
446: running 013.no-reads-sa-cold
446: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 --max-err-count 0 input/013.t_I1.fastq input/013.t_I2.fastq input/013.t_R1.fastq input/013.t_R2.fastq 1>./actual/013.no-reads-sa-cold/load.stdout 2>./actual/013.no-reads-sa-cold/load.stderr
315/426 Test #446: Test_013.no-reads-sa-cold ..............................   Passed   14.12 sec
test 447
        Start 447: Test_014.2files_bad_sequence

447: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "014.2files_bad_sequence" "0" "0" "--debug" "--no-timestamp" "input/014.R1.fastq input/014.R2.fastq"
447: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
447: Test timeout computed to be: 1500
447: running 014.2files_bad_sequence
447: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp input/014.R1.fastq input/014.R2.fastq 1>./actual/014.2files_bad_sequence/load.stdout 2>./actual/014.2files_bad_sequence/load.stderr
316/426 Test #447: Test_014.2files_bad_sequence ...........................   Passed    0.51 sec
test 448
        Start 448: Test_015.pending_spots

448: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "015.pending_spots" "0" "0" "--debug" "--no-timestamp" "input/015.R1.fq input/015.R2.fq"
448: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
448: Test timeout computed to be: 1500
448: running 015.pending_spots
448: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp input/015.R1.fq input/015.R2.fq 1>./actual/015.pending_spots/load.stdout 2>./actual/015.pending_spots/load.stderr
317/426 Test #448: Test_015.pending_spots .................................   Passed    0.46 sec
test 449
        Start 449: Test_015.pending_spots-sa-hot

449: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "015.pending_spots-sa-hot" "0" "0" "--debug" "--no-timestamp" "--spot-assembly input/015.R1.fq input/015.R2.fq"
449: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
449: Test timeout computed to be: 1500
449: running 015.pending_spots-sa-hot
449: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly input/015.R1.fq input/015.R2.fq 1>./actual/015.pending_spots-sa-hot/load.stdout 2>./actual/015.pending_spots-sa-hot/load.stderr
318/426 Test #449: Test_015.pending_spots-sa-hot ..........................   Passed    0.95 sec
test 450
        Start 450: Test_015.pending_spots-sa-cold

450: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "015.pending_spots-sa-cold" "0" "0" "--debug" "--no-timestamp" "--spot-assembly --hot-reads-threshold 0 input/015.R1.fq input/015.R2.fq"
450: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
450: Test timeout computed to be: 1500
450: running 015.pending_spots-sa-cold
450: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --spot-assembly --hot-reads-threshold 0 input/015.R1.fq input/015.R2.fq 1>./actual/015.pending_spots-sa-cold/load.stdout 2>./actual/015.pending_spots-sa-cold/load.stderr
319/426 Test #450: Test_015.pending_spots-sa-cold .........................   Passed    0.72 sec
test 451
        Start 451: Test_016.set.platform

451: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "sharq" "." "016.set.platform" "0" "1" "--debug" "--no-timestamp" "--platform=BGISEQ input/001.R1.fastq"
451: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
451: Test timeout computed to be: 1500
451: running 016.set.platform
451: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq --debug --no-timestamp --platform=BGISEQ input/001.R1.fastq -t ./actual/016.set.platform/telemetry 1>./actual/016.set.platform/load.stdout 2>./actual/016.set.platform/load.stderr
320/426 Test #451: Test_016.set.platform ..................................   Passed    0.35 sec
test 452
        Start 452: Test_DbMetaSingleFile

452: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase-meta.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta" "." "DbMetaSingleFile" "input/001.R1.fastq" "LOAD"
452: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
452: Test timeout computed to be: 1500
452: running DbMetaSingleFile
452: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq input/001.R1.fastq 2>./actual/DbMetaSingleFile/load.stderr | /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader -T ./actual/DbMetaSingleFile/db -I ./../../../libs/schema:./../../../../ncbi-vdb/interfaces 1>./actual/DbMetaSingleFile/load.stdout 2>>./actual/DbMetaSingleFile/load.stderr
452: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase-meta.sh: line 96: ./actual/DbMetaSingleFile/db: Is a directory
452: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq input/001.R1.fastq 2>./actual/DbMetaSingleFile/load.stderr | /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader -T ./actual/DbMetaSingleFile/db -I ./../../../libs/schema:./../../../../ncbi-vdb/interfaces 1>./actual/DbMetaSingleFile/load.stdout 2>>./actual/DbMetaSingleFile/load.stderr
321/426 Test #452: Test_DbMetaSingleFile ..................................   Passed    1.20 sec
test 453
        Start 453: Test_DbMetaMultipleFiles

453: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase-meta.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/kdbmeta" "." "DbMetaMultipleFiles" "input/r1.fastq input/r2.fastq" "LOAD"
453: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq
453: Test timeout computed to be: 1500
453: running DbMetaMultipleFiles
453: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq input/r1.fastq input/r2.fastq 2>./actual/DbMetaMultipleFiles/load.stderr | /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader -T ./actual/DbMetaMultipleFiles/db -I ./../../../libs/schema:./../../../../ncbi-vdb/interfaces 1>./actual/DbMetaMultipleFiles/load.stdout 2>>./actual/DbMetaMultipleFiles/load.stderr
453: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sharq/runtestcase-meta.sh: line 96: ./actual/DbMetaMultipleFiles/db: Is a directory
453: CMD=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/sharq input/r1.fastq input/r2.fastq 2>./actual/DbMetaMultipleFiles/load.stderr | /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/general-loader -T ./actual/DbMetaMultipleFiles/db -I ./../../../libs/schema:./../../../../ncbi-vdb/interfaces 1>./actual/DbMetaMultipleFiles/load.stdout 2>>./actual/DbMetaMultipleFiles/load.stderr
322/426 Test #453: Test_DbMetaMultipleFiles ...............................   Passed    1.30 sec
test 454
        Start 454: Test_sra_sort_meta_copy

454: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sra-sort/sra_sort_meta_copy.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema:/usr/include/ncbi-vdb" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin"
454: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/loaders/sra-sort
454: Test timeout computed to be: 1500
454: Files before.xml and after.xml are identical
323/426 Test #454: Test_sra_sort_meta_copy ................................   Passed    3.02 sec
test 455
        Start 455: Test_Align_samextract

455: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_Align_samextract
455: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/align
455: Test timeout computed to be: 1500
455: Running 14 test cases...
455: Test_Qual_Decode (0 s)
455: Fast_Sequence (0 s)
455: Fast_u32toa (0 s)
455: Fast_i32toa (0 s)
455: Fast_strtoi64 (0 s)
455: Decode_Cigar (0 s)
455: Check_Cigar (0 s)
455: In_Range (0 s)
455: Is_MD5 (0 s)
455: Is_floworder (0 s)
455: header1 (0 s)
455: BAMfile (0 s)
455: Filter (0 s)
455: None of below files should hang:
455: 	fuzz/id000000,sig11,src000036,ophavoc,rep128
455: 	fuzz/id000000,src000000+000001,opsplice,rep16
455: 	fuzz/id000000,src000000,oparith8,pos3,val+10
455: 	fuzz/id000001,src000001,oparith16,pos10,val-6
455: 	fuzz/id000001,src000001,oparith8,pos10,val+9
455: 	fuzz/id000001,src000003,ophavoc,rep2
455: 	fuzz/id000002,src000000+000006,opsplice,rep64
455: 	fuzz/id000002,src000001,oparith8,pos10,val-31
455: 	fuzz/id000002,src000001,ophavoc,rep4
455: 	fuzz/id000003,src000001,ophavoc,rep2
455: 	fuzz/id000003,src000001,ophavoc,rep8
455: 	fuzz/id000003,src000007,ophavoc,rep2
455: 	fuzz/id000004,src000001,ophavoc,rep2
455: 	fuzz/id000004,src000001,ophavoc,rep32
455: 	fuzz/id000004,src000012,ophavoc,rep8
455: 	fuzz/id000005,src000001,ophavoc,rep2
455: 	fuzz/id000005,src000001,ophavoc,rep8
455: 	fuzz/id000005,src000013+000012,opsplice,rep4
455: 	fuzz/id000006,src000001,ophavoc,rep2
455: 	fuzz/id000006,src000001,ophavoc,rep4
455: 	fuzz/id000006,src000014,ophavoc,rep2
455: 	fuzz/id000007,src000002,opflip1,pos4
455: 	fuzz/id000007,src000023,ophavoc,rep4
455: 	fuzz/id000008,src000002,opflip1,pos8
455: 	fuzz/id000008,src000029,ophavoc,rep64
455: 	fuzz/id000009,src000002,opflip1,pos22
455: 	fuzz/id000009,src000031,ophavoc,rep2
455: 	fuzz/id000010,src000002,opflip1,pos25
455: 	fuzz/id000010,src000037+000017,opsplice,rep2
455: 	fuzz/id000011,src000002,opflip1,pos33
455: 	fuzz/id000011,src000046,ophavoc,rep2
455: 	fuzz/id000012,src000002,opflip4,pos20
455: 	fuzz/id000012,src000049,ophavoc,rep4
455: 	fuzz/id000013,src000002,opflip4,pos38
455: 	fuzz/id000013,src000048,ophavoc,rep2
455: 	fuzz/id000014,src000002,opflip4,pos76
455: 	fuzz/id000014,src000021+000026,opsplice,rep2
455: 	fuzz/id000015,src000002,opflip8,pos25
455: 	fuzz/id000015,src000056,ophavoc,rep2
455: 	fuzz/id000016,src000002,opint16,pos77,val-129
455: 	fuzz/id000016,src000002,opint8,pos14,val-1
455: 	fuzz/id000017,src000002,ophavoc,rep32
455: 	fuzz/id000017,src000002,opint16,pos77,val-129
455: 	fuzz/id000018,src000002,opint32,pos25,val+2147483647
455: 	fuzz/id000018,src000003,opint16,pos3,val-129
455: 	fuzz/id000019,src000002,opint32,pos33,valbe-128
455: 	fuzz/id000019,src000007,opflip16,pos33
455: 	fuzz/id000020,src000002,ophavoc,rep4
455: 	fuzz/id000020,src000007,opint16,pos117,val-129
455: 	fuzz/id000021,src000004,opint16,pos4,val+32767
455: 	fuzz/id000021,src000011,opflip4,pos76
455: 	fuzz/id000022,src000004,ophavoc,rep16
455: 	fuzz/id000022,src000011,opflip4,pos116
455: 	fuzz/id000023,src000011,opflip4,pos116
455: 	fuzz/id000023,src000018,opflip1,pos15
455: 	fuzz/id000024,src000011,opflip16,pos52
455: 	fuzz/id000024,src000018,opflip1,pos26
455: 	fuzz/id000025,src000018,opflip1,pos15
455: 	fuzz/id000025,src000018,opflip4,pos92
455: 	fuzz/id000026,src000018,opflip1,pos26
455: 	fuzz/id000026,src000018,opflip4,pos137
455: 	fuzz/id000027,src000018,opflip4,pos24
455: 	fuzz/id000028,src000018,opflip4,pos92
455: 	fuzz/id000029,src000018,opflip4,pos137
455: 	fuzz/id000030,src000018,opint16,pos138,val-129
455: 	fuzz/id000031,src000018,ophavoc,rep8
455: 
455: Fuzz_Hangs (0 s)
455: 
455: *** No errors detected (0 s total)
324/426 Test #455: Test_Align_samextract ..................................   Passed    0.41 sec
test 457
        Start 457: Test_Align_Cache

457: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/align-cache/runtest.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/libs/schema:/usr/include/ncbi-vdb" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "align-cache"
457: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/align-cache
457: Test timeout computed to be: 1500
457: testing align-cache
325/426 Test #457: Test_Align_Cache .......................................   Passed    0.59 sec
test 458
        Start 458: Test_KFF

458: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_KFF
458: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/copycat
458: Test timeout computed to be: 1500
458: Running 2 test cases...
458: ExtFileFormat (0 s)
458: MagicFileFormat (0 s)
458: 
458: *** No errors detected (0 s total)
326/426 Test #458: Test_KFF ...............................................   Passed    0.05 sec
test 459
        Start 459: Test_Copycat_Help

459: Test command: /usr/bin/sh "-c" "ls /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/copycat>/dev/null 2>&1 && /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/copycat -h || echo no copycat"
459: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/copycat
459: Test timeout computed to be: 1500
459: 
459: Usage:
459:   copycat [options] src-file dst-file
459:   copycat [options] src-file [src-file...] dst-dir
459:   copycat [options] -o dst-dir src-file [src-file...]
459: 
459: Summary:
459:   Copies files and/or directories, creating a catalog of the copied files.
459:   -x|--cache-dir <dir-path>        location of output cached files 
459:   -f|--force                       force overwrite of existing files 
459:   -o|--output <file-path>          location of output 
459:   -e|--extract <dir-path>          location of extracted files 
459:   -E|--extract-to-dir              extracted directories match normal XML 
459:   -X|--xml-dir                     XML matches extracted files 
459:   --input-buffer <size-in-KB>      system file reads are of blocks of this size 
459:   --output-buffer <size-in-KB>     system file writes are of blocks of this 
459:                                    size 
459:   --no-bzip2                       do not decompress files compressed with 
459:                                    bzip2 
459:   --no-md5                         do not calculate md5 hashes 
459:   -h|--help                        Output brief explanation for the program. 
459:   -V|--version                     Display the version of the program then 
459:                                    quit. 
459:   -L|--log-level <level>           Logging level as number or enum string. One 
459:                                    of (fatal|sys|int|err|warn|info|debug) or 
459:                                    (0-6) Current/default is warn. 
459:   -v|--verbose                     Increase the verbosity of the program 
459:                                    status messages. Use multiple times for more 
459:                                    verbosity. Negates quiet. 
459:   -q|--quiet                       Turn off all status messages for the 
459:                                    program. Negated by verbose. 
459:   --option-file <file>             Read more options and parameters from the 
459:                                    file. 
459: Use:
459:  Copy and catalog:
459:   Some quick examples:
459:     copycat dir/file.tar other-dir/file.tar
459:       copy file.tar from dir to other-dir and write the catalog to stdout
459:     copycat dir/file.tar otherdir/
459:       the same
459:     copycat "ncbi-file:dir/file.tar.nenc?encrypt&pwfile=pw other-dir.file.tar
459:       copy and decrypt file.tar.nenc from dir to other-dir and catalog
459:     copycat dir/file.tar "ncbi-file:other-dir/file.tar.nenc?encrypt&pwfile=pw
459:       copy and encrypt file.tar from dir to other-dir/file.tar.nenc and catalog
459:     copycat "ncbi-file:dir/file.tar.nenc?encrypt&pwfile=pw1 \
459:                    "ncbi-file:other-dir/file.tar.nenc?encrypt&pwfile=pw2
459:       copy the file as above while changing the encryption
459: 
459: Use:
459:   Copy source file[s] to a destination file or directory.
459:   File names can either be typical path names or they can be URLs (IRLs) using
459:   the standard "file" or extended "ncbi-file" schemes.
459:   The catalog is XML output sent by default to stdout.
459:   As UTF-8 is accepted in the paths they are IRLs for International Resource
459:   Locators.
459: 
459:   If the specified destination does not exist, there could be an ambiguity
459:   whether the destination is supposed to be a file or directory.  If the
459:   entered path ends in a '/' character or if there is more than one source
459:   it is assumed to mean a directory and is created as such.  If neither of
459:   of those apply it is assumed to be a file.
459: 
459:   The sources or destination may also be special Unix devices:
459:     /dev/stdin is supported as a source.
459:     /dev/stdout and /dev/stderr is supported as a destination.
459:   Other file descriptor devices can be used in the form:
459:     /dev/fd/<fd-number>
459:   For example /dev/stdin is synonymous with /dev/fd/0 as a source.
459:   If /dev/stdout or /dev/fd/1 is used as the destination then the XML
459:   output is redirected to /dev/stderr (/dev/fd/2).
459:   Device /dev/null as the destination is treated as a file with only one
459:   source but as a directory if more than one source.  Using this device
459:   means no actual file will be copied but the cataloging will be done but
459:   xml-base-node must be used.
459: 
459:   These special devices can be entered using the URL (IRL) schemes if
459:   desired.  This allows the use of 'query' decorators.
459:   
459:   If a query is added to the URL it will need to be enclosed within '"'
459:   characters on a command line to prevent premature interpretation.
459:   The query for the 'ncbi-file' extension to the 'file' scheme allows
459:   encryption and decryption.  The supported query is introduced by the
459:   standard URI/IRI syntax of a '?' character with a '&' character
459:   separating individual query-entries.
459: 
459:   The supported query entries are:
459:     'encrypt' or 'enc' to mean the input may be encrypted or the output
459:       will be encrypted,
459:     'pwfile=<path>' gives the path to file containing the password.
459:     'pwfd=<FD>' gives the numerical file descriptor from which to read
459:       the password,
459: 
459:   In this program the encrypted input can apply to a file contained within
459:   the source rather than just the source file itself.  The tool is fully
459:   compatible with all versions of NCBI encryption.
459: 
459:   If the output is to be encrypted only the newer FIPS compliant encryption
459:   will be used and applies to the whole file.
459: 
459: NOTE: Not all combinations of URL specifications will work at this point.
459: 
459: NOTE: using the same file descriptor for multiple sources or overlapping with
459:       stdin/stdout/stderr may cause undefined behavior including hanging the
459:       the program.
459: 
459:   The '-x' option allows small files that are typed as eligible for
459:   caching to be copied to the cache directory provided. the directory
459:   will be created if necessary.
459:   the intent is to capture top-level files, such that files are copied
459:   into the flat cache directory without regard to where they were found
459:   in the input hierarchy. in the case of name conflict, output files will
459:   be renamed.
459: 
459:   To prevent internal decompression of bzipped files, use the option
459:     '--no-bzip2'
459: 
459:   To prevent calculation of MD5 hashes, use the option
459:     '--no-md5'
459: 
459: 
459: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/copycat : 3.2.1
459: 
327/426 Test #459: Test_Copycat_Help ......................................   Passed    0.04 sec
test 460
        Start 460: Test_Copycat_Bad_Name

460: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/copycat/test-bad-name.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "copycat"
460: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/copycat
460: Test timeout computed to be: 1500
460: testing copycat expected output for file name with %
460: copycat test file name with % succeeded
328/426 Test #460: Test_Copycat_Bad_Name ..................................   Passed    1.02 sec
test 461
        Start 461: Test_Copycat_IdenticalCopy

461: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/copycat/test-copy.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "copycat"
461: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/copycat
461: Test timeout computed to be: 1500
461: testing copycat copy
461: copycat copy succeeded
329/426 Test #461: Test_Copycat_IdenticalCopy .............................   Passed    0.16 sec
test 462
        Start 462: Test_Copycat_FastqParser

462: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/copycat/test-fastq.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "copycat"
462: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/copycat
462: Test timeout computed to be: 1500
462: testing copycat fastq parser
462: copycat fastq parser succeeded
330/426 Test #462: Test_Copycat_FastqParser ...............................   Passed    0.61 sec
test 463
        Start 463: Test_MakeReadFilter

463: Test command: /usr/bin/cmake "-E" "env" "VDB_CONFIG=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/tmp" "/usr/bin/cmake" "-E" "env" "NCBI_SETTINGS=/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/tmp/tmp.mkfg" "/usr/bin/cmake" "-E" "env" "VDB_LIBRARY_PATH=/usr/lib/aarch64-linux-gnu" "./runtest.sh" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "/usr/lib/aarch64-linux-gnu" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/tmp" ""
463: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/make-read-filter
463: Test timeout computed to be: 1500
463: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin /usr/lib/aarch64-linux-gnu /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/tmp
331/426 Test #463: Test_MakeReadFilter ....................................   Passed    0.60 sec
test 464
        Start 464: Test_Read_filter_redact_Check_exit_code

464: Test command: /usr/bin/sh "-c" "ls /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/read-filter-redact>/dev/null 2>&1 && /usr/bin/python3 /build/reproducible-path/sra-sdk-3.2.1+dfsg/build/check-exit-code.py /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/read-filter-redact || echo no read-filter-redact"
464: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/read-filter-redact
464: Test timeout computed to be: 1500
464: [check-exit-code.py] test passed for [/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/read-filter-redact]
332/426 Test #464: Test_Read_filter_redact_Check_exit_code ................   Passed    0.16 sec
test 465
        Start 465: Test_Read_filter_redact

465: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/read-filter-redact/runtests.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "read-filter-redact"
465: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/read-filter-redact
465: Test timeout computed to be: 1500
465: Testing read-filter-redact from /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin
333/426 Test #465: Test_Read_filter_redact ................................   Passed    0.63 sec
test 466
        Start 466: Test_VDB_Copy_Check_exit_code

466: Test command: /usr/bin/python3 "/build/reproducible-path/sra-sdk-3.2.1+dfsg/build/check-exit-code.py" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-copy"
466: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/vdb-copy
466: Test timeout computed to be: 1500
466: [check-exit-code.py] test passed for [/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-copy]
334/426 Test #466: Test_VDB_Copy_Check_exit_code ..........................   Passed    0.10 sec
test 468
        Start 468: Test_VDB_Copy_Should_Fail_On_Invalid_Accession

468: Test command: /usr/bin/sh "-c" "./return_code_on_error.sh /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin"
468: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/vdb-copy
468: Test timeout computed to be: 1500
468: 2026-05-20T15:16:51 vdb-copy.3.2.1 int: item not found while copying within virtual database module -  the path 'NOT_EXISTING_DIR' cannot be opened as vdb-database or vdb-table
468: SUCCESS: vdb-copy returned 3 if ask to copy a none-existing object.
335/426 Test #468: Test_VDB_Copy_Should_Fail_On_Invalid_Accession .........   Passed    0.11 sec
test 470
        Start 470: Test_VDB_Diff_Check_exit_code

470: Test command: /usr/bin/sh "-c" "ls /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-diff>/dev/null 2>&1 && /usr/bin/python3 /build/reproducible-path/sra-sdk-3.2.1+dfsg/build/check-exit-code.py /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-diff || echo no vdb-diff"
470: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/internal/vdb-diff
470: Test timeout computed to be: 1500
470: WARNING[TEST1] help message is in 'STDOUT'
470: [check-exit-code.py] test passed for [/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/vdb-diff]
336/426 Test #470: Test_VDB_Diff_Check_exit_code ..........................   Passed    0.11 sec
test 473
        Start 473: Test_qa-stats_Input

473: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_qa-stats_Input
473: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
473: Test timeout computed to be: 1500
473: Running 4 test cases...
473: Empty (0 s)
473: Fastq_1 (0 s)
473: Fastq_2 (0 s)
473: Fastq_File (0 s)
473: 
473: *** No errors detected (0 s total)
337/426 Test #473: Test_qa-stats_Input ....................................   Passed    0.02 sec
test 474
        Start 474: Test_qa-stats_Output

474: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_qa-stats_Output
474: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
474: Test timeout computed to be: 1500
474: Running 19 test cases...
474: Empty (0 s)
474: InsertInt (0 s)
474: InsertFloat (0 s)
474: InsertTrue (0 s)
474: InsertFalse (0 s)
474: InsertChar (0 s)
474: InsertCString (0 s)
474: InsertString (0 s)
474: InsertStringView (0 s)
474: InsertArrayElem (0 s)
474: InsertArrayElems (0 s)
474: InsertArrayElems_Strings (0 s)
474: InsertMember (0 s)
474: InsertMembers (0 s)
474: InsertArrayElem_compact (0 s)
474: InsertArrayElems_compact (0 s)
474: InsertArrayElems_Strings_compact (0 s)
474: InsertMember_compact (0 s)
474: InsertMembers_compact (0 s)
474: 
474: *** No errors detected (0 s total)
338/426 Test #474: Test_qa-stats_Output ...................................   Passed    0.01 sec
test 475
        Start 475: Test_qa-stats_Fingerprint

475: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_qa-stats_Fingerprint
475: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
475: Test timeout computed to be: 1500
475: Running 7 test cases...
475: Empty (0 s)
475: EmptyRead (0 s)
475: OneBase (0 s)
475: AllBases (0 s)
475: MultiRead (0 s)
475: ReadHash_example_Fig_1_Fig_2 (0 s)
475: WrapAround (0 s)
475: 
475: *** No errors detected (0 s total)
339/426 Test #475: Test_qa-stats_Fingerprint ..............................   Passed    0.02 sec
test 476
        Start 476: Test_qa-stats_Hashing

476: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/test-bin/Test_qa-stats_Hashing
476: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
476: Test timeout computed to be: 1500
476: Running 20 test cases...
476: Empty_SHA224 (0 s)
476: Empty_VDB_SHA224 (0 s)
476: Empty_SHA256 (0 s)
476: Empty_VDB_SHA256 (0 s)
476: Empty_SHA384 (0 s)
476: Empty_VDB_SHA384 (0 s)
476: Empty_SHA512 (0 s)
476: Empty_VDB_SHA512 (0 s)
476: SHA224_QBF (0 s)
476: VDB_SHA224_QBF (0 s)
476: SHA256_QBF (0 s)
476: VDB_SHA256_QBF (0 s)
476: SHA384_QBF (0 s)
476: VDB_SHA384_QBF (0 s)
476: SHA512_QBF (0 s)
476: VDB_SHA512_QBF (0 s)
476: SHA_224 (0 s)
476: SHA_256 (0 s)
476: SHA_384 (0 s)
476: SHA_512 (0 s)
476: 
476: *** No errors detected (0 s total)
340/426 Test #476: Test_qa-stats_Hashing ..................................   Passed    0.02 sec
test 477
        Start 477: Test_qa-stats

477: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/runtests.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/test-tools/qa-stats"
477: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
477: Test timeout computed to be: 1500
477: /usr/bin/python3
477: python3 found
477: /usr/bin/python3
477: Testing with default parameters.
477: progress: 100 records, per second: 63710.5
477: progress: 100 records, per second: 14719.7
477: progress: 100 records, per second: 22428.4
477: Testing with one biological read.
477: progress: 100 records, per second: 66718.3
477: progress: 100 records, per second: 15077.9
477: progress: 100 records, per second: 20570
477: Testing with one technical read.
477: progress: 100 records, per second: 55380.8
477: progress: 100 records, per second: 14153
477: progress: 100 records, per second: 21176.7
477: Testing with two biological read.
477: progress: 102 records, per second: 54817.5
477: progress: 102 records, per second: 15202.3
477: progress: 102 records, per second: 13871.6
477: Testing with one biological and one technical read.
477: progress: 101 records, per second: 56477.6
477: progress: 101 records, per second: 4949.04
477: progress: 101 records, per second: 56939.9
477: Testing with multiple layouts.
477: progress: 101 records, per second: 62582.1
477: progress: 101 records, per second: 9453.53
477: progress: 101 records, per second: 22747.1
341/426 Test #477: Test_qa-stats ..........................................   Passed    1.48 sec
test 478
        Start 478: Test_qa_stats_001.R1.fastq

478: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/001.R1.fastq 1>actual/001.R1.fastq.stdout 2>actual/001.R1.fastq.stderr"
478: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
478: Test timeout computed to be: 1500
342/426 Test #478: Test_qa_stats_001.R1.fastq .............................   Passed    0.00 sec
test 479
        Start 479: Test_qa_stats_003.R1.fastq

479: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/003.R1.fastq 1>actual/003.R1.fastq.stdout 2>actual/003.R1.fastq.stderr"
479: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
479: Test timeout computed to be: 1500
343/426 Test #479: Test_qa_stats_003.R1.fastq .............................   Passed    0.00 sec
test 480
        Start 480: Test_qa_stats_003.R2.fastq

480: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/003.R2.fastq 1>actual/003.R2.fastq.stdout 2>actual/003.R2.fastq.stderr"
480: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
480: Test timeout computed to be: 1500
344/426 Test #480: Test_qa_stats_003.R2.fastq .............................   Passed    0.00 sec
test 481
        Start 481: Test_qa_stats_003._I1.fastq

481: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/003._I1.fastq 1>actual/003._I1.fastq.stdout 2>actual/003._I1.fastq.stderr"
481: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
481: Test timeout computed to be: 1500
345/426 Test #481: Test_qa_stats_003._I1.fastq ............................   Passed    0.00 sec
test 482
        Start 482: Test_qa_stats_003.t_I1.fastq

482: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/003.t_I1.fastq 1>actual/003.t_I1.fastq.stdout 2>actual/003.t_I1.fastq.stderr"
482: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
482: Test timeout computed to be: 1500
346/426 Test #482: Test_qa_stats_003.t_I1.fastq ...........................   Passed    0.00 sec
test 483
        Start 483: Test_qa_stats_003.t_R1.fastq

483: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/003.t_R1.fastq 1>actual/003.t_R1.fastq.stdout 2>actual/003.t_R1.fastq.stderr"
483: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
483: Test timeout computed to be: 1500
347/426 Test #483: Test_qa_stats_003.t_R1.fastq ...........................   Passed    0.00 sec
test 484
        Start 484: Test_qa_stats_003.t_R2.fastq

484: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/003.t_R2.fastq 1>actual/003.t_R2.fastq.stdout 2>actual/003.t_R2.fastq.stderr"
484: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
484: Test timeout computed to be: 1500
348/426 Test #484: Test_qa_stats_003.t_R2.fastq ...........................   Passed    0.01 sec
test 485
        Start 485: Test_qa_stats_009.test_I1_001.fastq

485: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/009.test_I1_001.fastq 1>actual/009.test_I1_001.fastq.stdout 2>actual/009.test_I1_001.fastq.stderr"
485: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
485: Test timeout computed to be: 1500
349/426 Test #485: Test_qa_stats_009.test_I1_001.fastq ....................   Passed    0.01 sec
test 486
        Start 486: Test_qa_stats_009.test_R1_001.fastq

486: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/009.test_R1_001.fastq 1>actual/009.test_R1_001.fastq.stdout 2>actual/009.test_R1_001.fastq.stderr"
486: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
486: Test timeout computed to be: 1500
350/426 Test #486: Test_qa_stats_009.test_R1_001.fastq ....................   Passed    0.01 sec
test 487
        Start 487: Test_qa_stats_009.test_R2_001.fastq

487: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/009.test_R2_001.fastq 1>actual/009.test_R2_001.fastq.stdout 2>actual/009.test_R2_001.fastq.stderr"
487: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
487: Test timeout computed to be: 1500
351/426 Test #487: Test_qa_stats_009.test_R2_001.fastq ....................   Passed    0.01 sec
test 488
        Start 488: Test_qa_stats_009.test_R3_001.fastq

488: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/009.test_R3_001.fastq 1>actual/009.test_R3_001.fastq.stdout 2>actual/009.test_R3_001.fastq.stderr"
488: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
488: Test timeout computed to be: 1500
352/426 Test #488: Test_qa_stats_009.test_R3_001.fastq ....................   Passed    0.01 sec
test 489
        Start 489: Test_qa_stats_012.test2_I1_001.fastq

489: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/012.test2_I1_001.fastq 1>actual/012.test2_I1_001.fastq.stdout 2>actual/012.test2_I1_001.fastq.stderr"
489: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
489: Test timeout computed to be: 1500
353/426 Test #489: Test_qa_stats_012.test2_I1_001.fastq ...................   Passed    0.00 sec
test 490
        Start 490: Test_qa_stats_012.test2_R1_001.fastq

490: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/012.test2_R1_001.fastq 1>actual/012.test2_R1_001.fastq.stdout 2>actual/012.test2_R1_001.fastq.stderr"
490: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
490: Test timeout computed to be: 1500
354/426 Test #490: Test_qa_stats_012.test2_R1_001.fastq ...................   Passed    0.00 sec
test 491
        Start 491: Test_qa_stats_012.test2_R2_001.fastq

491: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/012.test2_R2_001.fastq 1>actual/012.test2_R2_001.fastq.stdout 2>actual/012.test2_R2_001.fastq.stderr"
491: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
491: Test timeout computed to be: 1500
355/426 Test #491: Test_qa_stats_012.test2_R2_001.fastq ...................   Passed    0.00 sec
test 492
        Start 492: Test_qa_stats_012.test_I1_001.fastq

492: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/012.test_I1_001.fastq 1>actual/012.test_I1_001.fastq.stdout 2>actual/012.test_I1_001.fastq.stderr"
492: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
492: Test timeout computed to be: 1500
356/426 Test #492: Test_qa_stats_012.test_I1_001.fastq ....................   Passed    0.00 sec
test 493
        Start 493: Test_qa_stats_012.test_R1_001.fastq

493: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/012.test_R1_001.fastq 1>actual/012.test_R1_001.fastq.stdout 2>actual/012.test_R1_001.fastq.stderr"
493: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
493: Test timeout computed to be: 1500
357/426 Test #493: Test_qa_stats_012.test_R1_001.fastq ....................   Passed    0.00 sec
test 494
        Start 494: Test_qa_stats_012.test_R2_001.fastq

494: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/012.test_R2_001.fastq 1>actual/012.test_R2_001.fastq.stdout 2>actual/012.test_R2_001.fastq.stderr"
494: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
494: Test timeout computed to be: 1500
358/426 Test #494: Test_qa_stats_012.test_R2_001.fastq ....................   Passed    0.00 sec
test 495
        Start 495: Test_qa_stats_013.t_I1.fastq

495: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/013.t_I1.fastq 1>actual/013.t_I1.fastq.stdout 2>actual/013.t_I1.fastq.stderr"
495: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
495: Test timeout computed to be: 1500
359/426 Test #495: Test_qa_stats_013.t_I1.fastq ...........................   Passed    0.05 sec
test 496
        Start 496: Test_qa_stats_013.t_I2.fastq

496: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/013.t_I2.fastq 1>actual/013.t_I2.fastq.stdout 2>actual/013.t_I2.fastq.stderr"
496: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
496: Test timeout computed to be: 1500
360/426 Test #496: Test_qa_stats_013.t_I2.fastq ...........................   Passed    0.05 sec
test 497
        Start 497: Test_qa_stats_013.t_R1.fastq

497: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/013.t_R1.fastq 1>actual/013.t_R1.fastq.stdout 2>actual/013.t_R1.fastq.stderr"
497: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
497: Test timeout computed to be: 1500
361/426 Test #497: Test_qa_stats_013.t_R1.fastq ...........................   Passed    0.09 sec
test 498
        Start 498: Test_qa_stats_013.t_R2.fastq

498: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/013.t_R2.fastq 1>actual/013.t_R2.fastq.stdout 2>actual/013.t_R2.fastq.stderr"
498: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
498: Test timeout computed to be: 1500
362/426 Test #498: Test_qa_stats_013.t_R2.fastq ...........................   Passed    0.20 sec
test 499
        Start 499: Test_qa_stats_014.R1.fastq

499: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/014.R1.fastq 1>actual/014.R1.fastq.stdout 2>actual/014.R1.fastq.stderr"
499: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
499: Test timeout computed to be: 1500
363/426 Test #499: Test_qa_stats_014.R1.fastq .............................   Passed    0.00 sec
test 500
        Start 500: Test_qa_stats_014.R2.fastq

500: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/014.R2.fastq 1>actual/014.R2.fastq.stdout 2>actual/014.R2.fastq.stderr"
500: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
500: Test timeout computed to be: 1500
364/426 Test #500: Test_qa_stats_014.R2.fastq .............................   Passed    0.00 sec
test 501
        Start 501: Test_qa_stats_1.1.fastq

501: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/1.1.fastq 1>actual/1.1.fastq.stdout 2>actual/1.1.fastq.stderr"
501: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
501: Test timeout computed to be: 1500
365/426 Test #501: Test_qa_stats_1.1.fastq ................................   Passed    0.00 sec
test 502
        Start 502: Test_qa_stats_1.2.fastq

502: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/1.2.fastq 1>actual/1.2.fastq.stdout 2>actual/1.2.fastq.stderr"
502: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
502: Test timeout computed to be: 1500
366/426 Test #502: Test_qa_stats_1.2.fastq ................................   Passed    0.00 sec
test 503
        Start 503: Test_qa_stats_1.3.fastq

503: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/1.3.fastq 1>actual/1.3.fastq.stdout 2>actual/1.3.fastq.stderr"
503: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
503: Test timeout computed to be: 1500
367/426 Test #503: Test_qa_stats_1.3.fastq ................................   Passed    0.00 sec
test 504
        Start 504: Test_qa_stats_1.4.fastq

504: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/1.4.fastq 1>actual/1.4.fastq.stdout 2>actual/1.4.fastq.stderr"
504: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
504: Test timeout computed to be: 1500
368/426 Test #504: Test_qa_stats_1.4.fastq ................................   Passed    0.00 sec
test 505
        Start 505: Test_qa_stats_10.0.fastq

505: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/10.0.fastq 1>actual/10.0.fastq.stdout 2>actual/10.0.fastq.stderr"
505: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
505: Test timeout computed to be: 1500
369/426 Test #505: Test_qa_stats_10.0.fastq ...............................   Passed    0.00 sec
test 506
        Start 506: Test_qa_stats_11.0.1.fasta

506: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/11.0.1.fasta 1>actual/11.0.1.fasta.stdout 2>actual/11.0.1.fasta.stderr"
506: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
506: Test timeout computed to be: 1500
370/426 Test #506: Test_qa_stats_11.0.1.fasta .............................   Passed    0.00 sec
test 507
        Start 507: Test_qa_stats_11.0.2.fasta

507: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/11.0.2.fasta 1>actual/11.0.2.fasta.stdout 2>actual/11.0.2.fasta.stderr"
507: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
507: Test timeout computed to be: 1500
371/426 Test #507: Test_qa_stats_11.0.2.fasta .............................   Passed    0.00 sec
test 508
        Start 508: Test_qa_stats_11.1.1.fastq

508: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/11.1.1.fastq 1>actual/11.1.1.fastq.stdout 2>actual/11.1.1.fastq.stderr"
508: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
508: Test timeout computed to be: 1500
372/426 Test #508: Test_qa_stats_11.1.1.fastq .............................   Passed    0.00 sec
test 509
        Start 509: Test_qa_stats_11.1.2.fastq

509: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/11.1.2.fastq 1>actual/11.1.2.fastq.stdout 2>actual/11.1.2.fastq.stderr"
509: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
509: Test timeout computed to be: 1500
373/426 Test #509: Test_qa_stats_11.1.2.fastq .............................   Passed    0.00 sec
test 510
        Start 510: Test_qa_stats_12.0.fastq

510: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/12.0.fastq 1>actual/12.0.fastq.stdout 2>actual/12.0.fastq.stderr"
510: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
510: Test timeout computed to be: 1500
374/426 Test #510: Test_qa_stats_12.0.fastq ...............................   Passed    0.00 sec
test 511
        Start 511: Test_qa_stats_12.1.fastq

511: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/12.1.fastq 1>actual/12.1.fastq.stdout 2>actual/12.1.fastq.stderr"
511: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
511: Test timeout computed to be: 1500
375/426 Test #511: Test_qa_stats_12.1.fastq ...............................   Passed    0.00 sec
test 512
        Start 512: Test_qa_stats_12.2.fastq

512: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/12.2.fastq 1>actual/12.2.fastq.stdout 2>actual/12.2.fastq.stderr"
512: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
512: Test timeout computed to be: 1500
376/426 Test #512: Test_qa_stats_12.2.fastq ...............................   Passed    0.00 sec
test 513
        Start 513: Test_qa_stats_13.0.fastq

513: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/13.0.fastq 1>actual/13.0.fastq.stdout 2>actual/13.0.fastq.stderr"
513: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
513: Test timeout computed to be: 1500
377/426 Test #513: Test_qa_stats_13.0.fastq ...............................   Passed    0.00 sec
test 514
        Start 514: Test_qa_stats_13.1.fastq

514: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/13.1.fastq 1>actual/13.1.fastq.stdout 2>actual/13.1.fastq.stderr"
514: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
514: Test timeout computed to be: 1500
378/426 Test #514: Test_qa_stats_13.1.fastq ...............................   Passed    0.00 sec
test 515
        Start 515: Test_qa_stats_14.0.fasta

515: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/14.0.fasta 1>actual/14.0.fasta.stdout 2>actual/14.0.fasta.stderr"
515: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
515: Test timeout computed to be: 1500
379/426 Test #515: Test_qa_stats_14.0.fasta ...............................   Passed    0.00 sec
test 516
        Start 516: Test_qa_stats_15.0.fastq

516: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/15.0.fastq 1>actual/15.0.fastq.stdout 2>actual/15.0.fastq.stderr"
516: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
516: Test timeout computed to be: 1500
380/426 Test #516: Test_qa_stats_15.0.fastq ...............................   Passed    0.01 sec
test 517
        Start 517: Test_qa_stats_16.0.fasta

517: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/16.0.fasta 1>actual/16.0.fasta.stdout 2>actual/16.0.fasta.stderr"
517: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
517: Test timeout computed to be: 1500
381/426 Test #517: Test_qa_stats_16.0.fasta ...............................   Passed    0.01 sec
test 518
        Start 518: Test_qa_stats_16.1.fastq

518: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/16.1.fastq 1>actual/16.1.fastq.stdout 2>actual/16.1.fastq.stderr"
518: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
518: Test timeout computed to be: 1500
382/426 Test #518: Test_qa_stats_16.1.fastq ...............................   Passed    0.00 sec
test 519
        Start 519: Test_qa_stats_17.0.fastq

519: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/17.0.fastq 1>actual/17.0.fastq.stdout 2>actual/17.0.fastq.stderr"
519: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
519: Test timeout computed to be: 1500
383/426 Test #519: Test_qa_stats_17.0.fastq ...............................   Passed    0.00 sec
test 520
        Start 520: Test_qa_stats_18.0.fastq

520: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/18.0.fastq 1>actual/18.0.fastq.stdout 2>actual/18.0.fastq.stderr"
520: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
520: Test timeout computed to be: 1500
384/426 Test #520: Test_qa_stats_18.0.fastq ...............................   Passed    0.00 sec
test 521
        Start 521: Test_qa_stats_2.1.1.fastq

521: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/2.1.1.fastq 1>actual/2.1.1.fastq.stdout 2>actual/2.1.1.fastq.stderr"
521: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
521: Test timeout computed to be: 1500
385/426 Test #521: Test_qa_stats_2.1.1.fastq ..............................   Passed    0.00 sec
test 522
        Start 522: Test_qa_stats_2.1.fastq

522: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/2.1.fastq 1>actual/2.1.fastq.stdout 2>actual/2.1.fastq.stderr"
522: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
522: Test timeout computed to be: 1500
386/426 Test #522: Test_qa_stats_2.1.fastq ................................   Passed    0.00 sec
test 523
        Start 523: Test_qa_stats_2.2.fastq

523: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/2.2.fastq 1>actual/2.2.fastq.stdout 2>actual/2.2.fastq.stderr"
523: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
523: Test timeout computed to be: 1500
387/426 Test #523: Test_qa_stats_2.2.fastq ................................   Passed    0.00 sec
test 524
        Start 524: Test_qa_stats_2.3.fastq

524: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/2.3.fastq 1>actual/2.3.fastq.stdout 2>actual/2.3.fastq.stderr"
524: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
524: Test timeout computed to be: 1500
388/426 Test #524: Test_qa_stats_2.3.fastq ................................   Passed    0.00 sec
test 525
        Start 525: Test_qa_stats_2.4.fastq

525: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/2.4.fastq 1>actual/2.4.fastq.stdout 2>actual/2.4.fastq.stderr"
525: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
525: Test timeout computed to be: 1500
389/426 Test #525: Test_qa_stats_2.4.fastq ................................   Passed    0.00 sec
test 526
        Start 526: Test_qa_stats_2.5.fastq

526: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/2.5.fastq 1>actual/2.5.fastq.stdout 2>actual/2.5.fastq.stderr"
526: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
526: Test timeout computed to be: 1500
390/426 Test #526: Test_qa_stats_2.5.fastq ................................   Passed    0.00 sec
test 527
        Start 527: Test_qa_stats_2.6.fastq

527: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/2.6.fastq 1>actual/2.6.fastq.stdout 2>actual/2.6.fastq.stderr"
527: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
527: Test timeout computed to be: 1500
391/426 Test #527: Test_qa_stats_2.6.fastq ................................   Passed    0.00 sec
test 528
        Start 528: Test_qa_stats_2.7.fastq

528: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/2.7.fastq 1>actual/2.7.fastq.stdout 2>actual/2.7.fastq.stderr"
528: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
528: Test timeout computed to be: 1500
392/426 Test #528: Test_qa_stats_2.7.fastq ................................   Passed    0.00 sec
test 529
        Start 529: Test_qa_stats_2.8.1.fastq

529: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/2.8.1.fastq 1>actual/2.8.1.fastq.stdout 2>actual/2.8.1.fastq.stderr"
529: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
529: Test timeout computed to be: 1500
393/426 Test #529: Test_qa_stats_2.8.1.fastq ..............................   Passed    0.00 sec
test 530
        Start 530: Test_qa_stats_2.8.fastq

530: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/2.8.fastq 1>actual/2.8.fastq.stdout 2>actual/2.8.fastq.stderr"
530: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
530: Test timeout computed to be: 1500
394/426 Test #530: Test_qa_stats_2.8.fastq ................................   Passed    0.00 sec
test 531
        Start 531: Test_qa_stats_2.9.1.fastq

531: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/2.9.1.fastq 1>actual/2.9.1.fastq.stdout 2>actual/2.9.1.fastq.stderr"
531: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
531: Test timeout computed to be: 1500
395/426 Test #531: Test_qa_stats_2.9.1.fastq ..............................   Passed    0.00 sec
test 532
        Start 532: Test_qa_stats_2.9.fastq

532: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/2.9.fastq 1>actual/2.9.fastq.stdout 2>actual/2.9.fastq.stderr"
532: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
532: Test timeout computed to be: 1500
396/426 Test #532: Test_qa_stats_2.9.fastq ................................   Passed    0.00 sec
test 533
        Start 533: Test_qa_stats_3.1a.fastq

533: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/3.1a.fastq 1>actual/3.1a.fastq.stdout 2>actual/3.1a.fastq.stderr"
533: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
533: Test timeout computed to be: 1500
397/426 Test #533: Test_qa_stats_3.1a.fastq ...............................   Passed    0.00 sec
test 534
        Start 534: Test_qa_stats_3.1b.fastq

534: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/3.1b.fastq 1>actual/3.1b.fastq.stdout 2>actual/3.1b.fastq.stderr"
534: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
534: Test timeout computed to be: 1500
398/426 Test #534: Test_qa_stats_3.1b.fastq ...............................   Passed    0.00 sec
test 535
        Start 535: Test_qa_stats_3.2a.fastq

535: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/3.2a.fastq 1>actual/3.2a.fastq.stdout 2>actual/3.2a.fastq.stderr"
535: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
535: Test timeout computed to be: 1500
399/426 Test #535: Test_qa_stats_3.2a.fastq ...............................   Passed    0.00 sec
test 536
        Start 536: Test_qa_stats_3.2b.fastq

536: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/3.2b.fastq 1>actual/3.2b.fastq.stdout 2>actual/3.2b.fastq.stderr"
536: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
536: Test timeout computed to be: 1500
400/426 Test #536: Test_qa_stats_3.2b.fastq ...............................   Passed    0.00 sec
test 537
        Start 537: Test_qa_stats_3.3a.fastq

537: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/3.3a.fastq 1>actual/3.3a.fastq.stdout 2>actual/3.3a.fastq.stderr"
537: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
537: Test timeout computed to be: 1500
401/426 Test #537: Test_qa_stats_3.3a.fastq ...............................   Passed    0.00 sec
test 538
        Start 538: Test_qa_stats_3.3b.fastq

538: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/3.3b.fastq 1>actual/3.3b.fastq.stdout 2>actual/3.3b.fastq.stderr"
538: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
538: Test timeout computed to be: 1500
402/426 Test #538: Test_qa_stats_3.3b.fastq ...............................   Passed    0.00 sec
test 539
        Start 539: Test_qa_stats_3.4a.fastq

539: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/3.4a.fastq 1>actual/3.4a.fastq.stdout 2>actual/3.4a.fastq.stderr"
539: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
539: Test timeout computed to be: 1500
403/426 Test #539: Test_qa_stats_3.4a.fastq ...............................   Passed    0.00 sec
test 540
        Start 540: Test_qa_stats_3.4b.fastq

540: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/3.4b.fastq 1>actual/3.4b.fastq.stdout 2>actual/3.4b.fastq.stderr"
540: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
540: Test timeout computed to be: 1500
404/426 Test #540: Test_qa_stats_3.4b.fastq ...............................   Passed    0.00 sec
test 541
        Start 541: Test_qa_stats_4.4.fastq

541: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/4.4.fastq 1>actual/4.4.fastq.stdout 2>actual/4.4.fastq.stderr"
541: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
541: Test timeout computed to be: 1500
405/426 Test #541: Test_qa_stats_4.4.fastq ................................   Passed    0.00 sec
test 542
        Start 542: Test_qa_stats_4.5.1.fastq

542: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/4.5.1.fastq 1>actual/4.5.1.fastq.stdout 2>actual/4.5.1.fastq.stderr"
542: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
542: Test timeout computed to be: 1500
406/426 Test #542: Test_qa_stats_4.5.1.fastq ..............................   Passed    0.00 sec
test 543
        Start 543: Test_qa_stats_4.5.2.fastq

543: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/4.5.2.fastq 1>actual/4.5.2.fastq.stdout 2>actual/4.5.2.fastq.stderr"
543: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
543: Test timeout computed to be: 1500
407/426 Test #543: Test_qa_stats_4.5.2.fastq ..............................   Passed    0.01 sec
test 544
        Start 544: Test_qa_stats_4.5.fastq

544: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/4.5.fastq 1>actual/4.5.fastq.stdout 2>actual/4.5.fastq.stderr"
544: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
544: Test timeout computed to be: 1500
408/426 Test #544: Test_qa_stats_4.5.fastq ................................   Passed    0.00 sec
test 545
        Start 545: Test_qa_stats_4.8.fastq

545: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/4.8.fastq 1>actual/4.8.fastq.stdout 2>actual/4.8.fastq.stderr"
545: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
545: Test timeout computed to be: 1500
409/426 Test #545: Test_qa_stats_4.8.fastq ................................   Passed    0.00 sec
test 546
        Start 546: Test_qa_stats_4.fastq

546: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/4.fastq 1>actual/4.fastq.stdout 2>actual/4.fastq.stderr"
546: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
546: Test timeout computed to be: 1500
410/426 Test #546: Test_qa_stats_4.fastq ..................................   Passed    0.00 sec
test 547
        Start 547: Test_qa_stats_6.0.fastq

547: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/6.0.fastq 1>actual/6.0.fastq.stdout 2>actual/6.0.fastq.stderr"
547: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
547: Test timeout computed to be: 1500
411/426 Test #547: Test_qa_stats_6.0.fastq ................................   Passed    0.00 sec
test 548
        Start 548: Test_qa_stats_7.1.fastq

548: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/7.1.fastq 1>actual/7.1.fastq.stdout 2>actual/7.1.fastq.stderr"
548: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
548: Test timeout computed to be: 1500
412/426 Test #548: Test_qa_stats_7.1.fastq ................................   Passed    0.00 sec
test 549
        Start 549: Test_qa_stats_7.2.fastq

549: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/7.2.fastq 1>actual/7.2.fastq.stdout 2>actual/7.2.fastq.stderr"
549: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
549: Test timeout computed to be: 1500
413/426 Test #549: Test_qa_stats_7.2.fastq ................................   Passed    0.00 sec
test 550
        Start 550: Test_qa_stats_7.3.fastq

550: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/7.3.fastq 1>actual/7.3.fastq.stdout 2>actual/7.3.fastq.stderr"
550: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
550: Test timeout computed to be: 1500
414/426 Test #550: Test_qa_stats_7.3.fastq ................................   Passed    0.00 sec
test 551
        Start 551: Test_qa_stats_8.0.fastq

551: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/8.0.fastq 1>actual/8.0.fastq.stdout 2>actual/8.0.fastq.stderr"
551: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
551: Test timeout computed to be: 1500
415/426 Test #551: Test_qa_stats_8.0.fastq ................................   Passed    0.00 sec
test 552
        Start 552: Test_qa_stats_8.1.fastq

552: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/8.1.fastq 1>actual/8.1.fastq.stdout 2>actual/8.1.fastq.stderr"
552: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
552: Test timeout computed to be: 1500
416/426 Test #552: Test_qa_stats_8.1.fastq ................................   Passed    0.00 sec
test 553
        Start 553: Test_qa_stats_9.0.fastq

553: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/9.0.fastq 1>actual/9.0.fastq.stdout 2>actual/9.0.fastq.stderr"
553: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
553: Test timeout computed to be: 1500
417/426 Test #553: Test_qa_stats_9.0.fastq ................................   Passed    0.00 sec
test 554
        Start 554: Test_qa_stats_ERR3487613.fasta

554: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/ERR3487613.fasta 1>actual/ERR3487613.fasta.stdout 2>actual/ERR3487613.fasta.stderr"
554: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
554: Test timeout computed to be: 1500
418/426 Test #554: Test_qa_stats_ERR3487613.fasta .........................   Passed    0.00 sec
test 555
        Start 555: Test_qa_stats_unaligned.fastq

555: Test command: /usr/bin/sh "-c" "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/input/unaligned.fastq 1>actual/unaligned.fastq.stdout 2>actual/unaligned.fastq.stderr"
555: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
555: Test timeout computed to be: 1500
419/426 Test #555: Test_qa_stats_unaligned.fastq ..........................   Passed    0.00 sec
test 556
        Start 556: Test_qa_stats_Finger_1

556: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats input/1.1.fastq --fingerprint" "." "Test_qa_stats_Finger_1"
556: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
556: Test timeout computed to be: 1500
556: running Test_qa_stats_Finger_1
556: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats input/1.1.fastq --fingerprint 1>./actual/Test_qa_stats_Finger_1/stdout 2>./actual/Test_qa_stats_Finger_1/stderr
420/426 Test #556: Test_qa_stats_Finger_1 .................................   Passed    0.01 sec
test 557
        Start 557: Test_qa_stats_Finger_2

557: Test command: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats/runtestcase.sh "/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats input/001.R1.fastq -f" "." "Test_qa_stats_Finger_2"
557: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/test-tools/qa-stats
557: Test timeout computed to be: 1500
557: running Test_qa_stats_Finger_2
557: /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/qa-stats input/001.R1.fastq -f 1>./actual/Test_qa_stats_Finger_2/stdout 2>./actual/Test_qa_stats_Finger_2/stderr
421/426 Test #557: Test_qa_stats_Finger_2 .................................   Passed    0.01 sec
test 558
        Start 558: Test_Scripts_prepare-sra-names

558: Test command: /usr/bin/perl "test-prepare-sra-names.pl"
558: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/scripts
558: Test timeout computed to be: 1500
422/426 Test #558: Test_Scripts_prepare-sra-names .........................   Passed    0.16 sec
test 559
        Start 559: Test_Scripts_fix-sra-names

559: Test command: /usr/bin/perl "test-fix-sra-names.pl"
559: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/scripts
559: Test timeout computed to be: 1500
423/426 Test #559: Test_Scripts_fix-sra-names .............................   Passed    0.10 sec
test 560
        Start 560: Test_Scripts_prepare-sra-names-py

560: Test command: /usr/bin/perl "test-prepare-sra-names-py.pl"
560: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/scripts
560: Test timeout computed to be: 1500
424/426 Test #560: Test_Scripts_prepare-sra-names-py ......................   Passed    0.45 sec
test 561
        Start 561: Test_Scripts_fix-sra-names-py

561: Test command: /usr/bin/perl "test-fix-sra-names-py.pl"
561: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/scripts
561: Test timeout computed to be: 1500
425/426 Test #561: Test_Scripts_fix-sra-names-py ..........................   Passed    0.25 sec
test 562
        Start 562: Test_GeneralWriterPy

562: Test command: /usr/bin/sh "-c" "/usr/bin/python3 GeneralWriter_Test.py >actual/Test_GeneralWriterPy.gw && /build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu/bin/gw-dumper -v actual/Test_GeneralWriterPy.gw >actual/Test_GeneralWriterPy.stdout && diff actual/Test_GeneralWriterPy.stdout expected/Test_GeneralWriterPy.stdout"
562: Working Directory: /build/reproducible-path/sra-sdk-3.2.1+dfsg/test/python
562: Test timeout computed to be: 1500
426/426 Test #562: Test_GeneralWriterPy ...................................   Passed    0.03 sec

100% tests passed, 0 tests failed out of 426

Total Test time (real) = 147.79 sec
make[1]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg'
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=cmake
   debian/rules override_dh_prep
make[1]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg'
dh_prep -X debian/tmp
make[1]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg'
   debian/rules override_dh_auto_install
make[1]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg'
dh_auto_install
	cd obj-aarch64-linux-gnu && make -j12 install DESTDIR=/build/reproducible-path/sra-sdk-3.2.1\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[2]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
/usr/bin/cmake -S/build/reproducible-path/sra-sdk-3.2.1+dfsg -B/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 preinstall
make[3]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'preinstall'.
make[3]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
mkdir: cannot create directory '/usr/bin/ncbi': Permission denied
cp: cannot create regular file '/usr/bin/ncbi/default.kfg': No such file or directory
mkdir: cannot create directory '/usr/bin/ncbi': Permission denied
cp: cannot create regular file '/usr/bin/ncbi/certs.kfg': No such file or directory
mkdir: cannot create directory '/usr/bin/ncbi': Permission denied
cp: cannot create regular file '/usr/bin/ncbi/vdb-copy.kfg': No such file or directory
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs-c++.a.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs-c++.a.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs-c++.a
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs-c++-static.a
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ncbi-vdb/NGS.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples/FragTest.cpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples/AlignTest.cpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples/AlignSliceTest.cpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples/PileupTest.cpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples/RefTest.cpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples/DumpReferenceFASTA.cpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples/expected.txt
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples/Makefile
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples/README.txt
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libngs-c++.a.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libngs-c++.a.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libngs-c++.a
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libngs-c++-static.a
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libngs-c++.so.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libngs-c++.so
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs.a.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs.a.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs.a
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs-static.a
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs.so.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs.so.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs.so
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/win
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/win/stdbool.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/win/atomic32.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/unix
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/unix/x86_64
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/unix/x86_64/atomic32.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/unix/i386
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/unix/i386/atomic32.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/unix/fat86
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/unix/fat86/atomic32.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/unix/arm64
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/unix/arm64/atomic32.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/defs.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/VTable.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/VTable.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/StringItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/StringItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/StatisticsItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/StatisticsItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/ReferenceSequenceItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/ReferenceSequenceItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/ReferenceItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/ReferenceItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/Refcount.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/Refcount.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/ReadItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/ReadItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/ReadGroupItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/ReadGroupItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/ReadCollectionItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/ReadCollectionItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/PileupItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/PileupItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/PileupEventItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/PileupEventItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/PackageItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/FragmentItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/FragmentItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/ErrorMsg.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/ErrBlock.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/ErrBlock.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/AlignmentItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/itf/AlignmentItf.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/inl
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/inl/StringRef.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/inl/Statistics.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/inl/ReferenceSequence.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/inl/ReferenceIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/inl/Reference.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/inl/ReadIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/inl/ReadGroupIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/inl/ReadGroup.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/inl/ReadCollection.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/inl/Read.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/inl/PileupIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/inl/PileupEventIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/inl/PileupEvent.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/inl/Pileup.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/inl/Package.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/inl/FragmentIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/inl/Fragment.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/inl/AlignmentIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/inl/Alignment.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/adapter
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/adapter/defs.h
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/adapter/StringItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/adapter/StatisticsItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/adapter/ReferenceSequenceItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/adapter/ReferenceItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/adapter/Refcount.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/adapter/ReadItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/adapter/ReadGroupItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/adapter/ReadCollectionItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/adapter/PileupItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/adapter/PileupEventItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/adapter/FragmentItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/adapter/ErrorMsg.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/adapter/AlignmentItf.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/StringRef.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/Statistics.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/ReferenceSequence.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/ReferenceIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/Reference.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/ReadIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/ReadGroupIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/ReadGroup.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/ReadCollection.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/Read.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/PileupIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/PileupEventIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/PileupEvent.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/Pileup.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/Package.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/FragmentIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/Fragment.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/ErrorMsg.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/AlignmentIterator.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/include/ngs/Alignment.hpp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/jar/ngs-java.jar
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples-java/examples/AlignTest.java
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples-java/examples/AlignSliceTest.java
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples-java/examples/FragTest.java
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples-java/examples/PileupTest.java
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples-java/examples/RefTest.java
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples-java/examples/ReadGroupTest.java
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples-java/examples/DumpReferenceFASTA.java
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples-java/Makefile
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples-java/README.txt
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples-java/expected.txt
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/jar/ngs-examples.jar
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/legal
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/legal/jquery.md
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/legal/jqueryUI.md
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/legal/ASSEMBLY_EXCEPTION
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/script-dir
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/script-dir/jquery-ui.min.css
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/script-dir/jquery-ui.min.js
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/script-dir/jquery-3.7.1.min.js
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/resources
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/resources/x.png
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/resources/glass.png
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/search-page.js
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/search.js
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/link.svg
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/copy.svg
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/script.js
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/stylesheet.css
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/help-doc.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/overview-summary.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/search.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/index-all.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/tag-search-index.js
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/member-search-index.js
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/type-search-index.js
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/package-search-index.js
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/module-search-index.js
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/allpackages-index.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/allclasses-index.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/index.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/overview-tree.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/serialized-form.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/constant-values.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/element-list
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/gov
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/gov/nih
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/gov/nih/nlm
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/gov/nih/nlm/ncbi
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/gov/nih/nlm/ncbi/ngs
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/gov/nih/nlm/ncbi/ngs/package-tree.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/gov/nih/nlm/ncbi/ngs/package-summary.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/gov/nih/nlm/ncbi/ngs/NGS.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/gov/nih/nlm/ncbi/ngs/LibDependencies.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/package-tree.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/package-summary.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/Statistics.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/ReferenceSequence.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/ReferenceIterator.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/Reference.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/ReadIterator.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/ReadGroupIterator.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/ReadGroup.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/ReadCollection.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/Read.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/PileupIterator.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/PileupEventIterator.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/PileupEvent.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/Pileup.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/Package.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/FragmentIterator.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/Fragment.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/ErrorMsg.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/AlignmentIterator.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/javadoc/ngs-doc/ngs/Alignment.html
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/jar/ngs-doc.jar
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/jar/ngs-src.jar
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples-python/AlignTest.py
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples-python/AlignSliceTest.py
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples-python/FragTest.py
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples-python/PileupTest.py
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples-python/RefTest.py
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples-python/expected.txt
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples-python/Makefile
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/share/examples-python/README.txt
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/bam-load.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/bam-load.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/bam-load
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/samview.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/samview.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/samview
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/kar.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/kar.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/kar
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/kar+.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/kar+.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/kar+
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/kar+meta.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/kar+meta.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/kar+meta
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/dump-blob-boundaries.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/dump-blob-boundaries.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/dump-blob-boundaries
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sra-sort.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sra-sort.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sra-sort
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sra-sort-cg.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sra-sort-cg.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sra-sort-cg
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/latf-load.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/latf-load.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/latf-load
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sharq.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sharq.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sharq
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sff-load.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sff-load.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sff-load
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/fastq-load.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/fastq-load.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/fastq-load
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/srf-load.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/srf-load.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/srf-load
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/abi-load.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/abi-load.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/abi-load
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/illumina-load.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/illumina-load.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/illumina-load
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/helicos-load.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/helicos-load.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/helicos-load
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/pacbio-loadxml.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/pacbio-loadxml.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/pacbio-loadxml
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/pacbio-load.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/pacbio-load.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/pacbio-load
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/cg-load.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/cg-load.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/cg-load
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/general-loader.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/general-loader.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/general-loader
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-lock.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-lock.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-lock
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-unlock.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-unlock.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-unlock
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/prefetch
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/prefetch.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/prefetch-orig.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/prefetch.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-config.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-config.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-config
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/fastq-dump
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/fastq-dump.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/fastq-dump-orig.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/fastq-dump.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sff-dump.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sff-dump.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sff-dump
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/illumina-dump.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/illumina-dump.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/illumina-dump
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/abi-dump.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/abi-dump.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/abi-dump
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sra-pileup
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sra-pileup.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sra-pileup-orig.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sra-pileup.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sam-dump
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sam-dump.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sam-dump-orig.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sam-dump.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/fasterq-dump
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/fasterq-dump.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/fasterq-dump-orig.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/fasterq-dump.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-dump
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-dump.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-dump-orig.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-dump.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-validate.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-validate.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-validate
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/check-corrupt.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/check-corrupt.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/check-corrupt
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-decrypt.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-decrypt.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-decrypt
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-encrypt.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-encrypt.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-encrypt
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/srapath
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/srapath.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/srapath-orig.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/srapath.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sra-stat.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sra-stat.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sra-stat
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/ngs-pileup.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/ngs-pileup.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/ngs-pileup
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/rcexplain.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/rcexplain.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/rcexplain
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/kdbmeta.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/kdbmeta.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/kdbmeta
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/align-info.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/align-info.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/align-info
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/ref-variation.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/ref-variation.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/ref-variation
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/var-expand.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/var-expand.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/var-expand
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sra-search.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sra-search.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sra-search
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/test-sra.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/test-sra.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/test-sra
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/cache-mgr.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/cache-mgr.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/cache-mgr
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sratools.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sratools.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sratools
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sra-info.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sra-info.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sra-info
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/align-cache.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/align-cache.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/align-cache
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/ccextract.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/ccextract.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/ccextract
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/check-redact.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/check-redact.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/check-redact
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/compute-coverage.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/compute-coverage.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/compute-coverage
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/compute-coverage-ngs.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/compute-coverage-ngs.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/compute-coverage-ngs
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/copycat.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/copycat.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/copycat
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/dump-ref-fasta.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/dump-ref-fasta.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/dump-ref-fasta
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/make-read-filter.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/make-read-filter.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/make-read-filter
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/md5cp.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/md5cp.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/md5cp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/meta-cmp.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/meta-cmp.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/meta-cmp
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/meta-copy.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/meta-copy.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/meta-copy
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/meta-repair.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/meta-repair.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/meta-repair
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/test-read-write-cursor.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/test-read-write-cursor.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/test-read-write-cursor
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/read-filter-redact.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/read-filter-redact.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/read-filter-redact
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-copy.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-copy.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-copy
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-diff.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-diff.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-diff
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-sql.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-sql.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/vdb-sql
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/fastconv.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/fastconv.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/fastconv
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/crc32sum.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/crc32sum.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/crc32sum
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/test-download.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/test-download.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/test-download
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/kdb-index.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/kdb-index.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/kdb-index
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/pacbio-correct.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/pacbio-correct.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/pacbio-correct
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/schema-replace.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/schema-replace.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/schema-replace
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sortreadtest.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sortreadtest.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/sortreadtest
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/rowwritetest.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/rowwritetest.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/rowwritetest
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/samview-util.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/samview-util.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/samview-util
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/testld.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/testld.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/testld
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/txt2kdb.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/txt2kdb.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/txt2kdb
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/pileup-stats.3.2.1
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/pileup-stats.3
-- Installing: /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/bin/pileup-stats
make[2]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg/obj-aarch64-linux-gnu'
# build/install.sh /usr/include/ncbi-vdb/kfg/ncbi \
# 		 /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-copy \
# 		 debian/sra-toolkit/etc/ncbi \
# 		 debian/sra-toolkit/etc/ncbi \
# 		 debian/sra-toolkit/usr/bin \
# 		 debian/sra-toolkit/usr/lib/aarch64-linux-gnu \
# 		 /build/reproducible-path/sra-sdk-3.2.1+dfsg/shared/kfgsums
build/install-kfg.sh default.kfg /usr/include/ncbi-vdb/kfg/ncbi debian/sra-toolkit/etc/ncbi \
		     /usr/include/ncbi-vdb/kfg/ncbi/kfgsums
build/install-kfg.sh certs.kfg /usr/include/ncbi-vdb/kfg/ncbi debian/sra-toolkit/etc/ncbi \
		     /usr/include/ncbi-vdb/kfg/ncbi/kfgsums
build/install-kfg.sh vdb-copy.kfg /build/reproducible-path/sra-sdk-3.2.1+dfsg/tools/internal/vdb-copy \
		     debian/sra-toolkit/etc/ncbi /build/reproducible-path/sra-sdk-3.2.1+dfsg/shared/kfgsums
d-shlibmove --commit \
	    --multiarch \
	    --devunversioned \
	    --exclude-a \
	    --exclude-la \
	    --movedev "debian/*/usr/lib/aarch64-linux-gnu/libncbi-ngs.a*" \
		usr/lib/aarch64-linux-gnu \
	    --override "s/libncbi-vdb3-dev/libncbi-vdb-dev/" \
	    debian/*/usr/lib/aarch64-linux-gnu/libncbi-ngs.so
Library package automatic movement utility
 --> libncbi-vdb-dev package exists.
set -e
install -d -m 755 debian/libncbi-ngs-dev/usr/lib/aarch64-linux-gnu
install -d -m 755 debian/libncbi-ngs3/usr/lib/aarch64-linux-gnu
mv debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs.so debian/libncbi-ngs-dev/usr/lib/aarch64-linux-gnu
mv /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs.so.3 debian/libncbi-ngs3/usr/lib/aarch64-linux-gnu
mv /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libncbi-ngs.so.3.2.1 debian/libncbi-ngs3/usr/lib/aarch64-linux-gnu
PKGDEV=libncbi-ngs-dev
PKGSHL=libncbi-ngs3
install -d -m 755 debian/libncbi-ngs-dev/usr/lib/aarch64-linux-gnu
mv debian/*/usr/lib/aarch64-linux-gnu/libncbi-ngs.a* debian/libncbi-ngs-dev/usr/lib/aarch64-linux-gnu
d-shlibmove --commit \
	    --multiarch \
	    --devunversioned \
	    --exclude-a \
	    --exclude-la \
	    --movedev "debian/*/usr/lib/aarch64-linux-gnu/lib*c++.a*" \
		usr/lib/aarch64-linux-gnu \
	    --movedev "debian/tmp/usr/include/*" usr/include \
	    --ignorelibdep \
	    debian/*/usr/lib/aarch64-linux-gnu/libngs-c++.so | \
	tee /dev/stderr | LC_ALL=C grep '^[a-z]' | sh
tee: /dev/stderr: Permission denied
Error occurred, aborting
make[1]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg'
   debian/rules override_dh_install
make[1]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg'
# upstream installs versioned *.a libs - we only want a single version
for d in debian/lib*-dev/usr/lib/aarch64-linux-gnu ; do \
    for slib in $d/lib*.a ; do \
	mv $d/`readlink $slib` $slib ; \
	mv $d/`readlink $slib` $slib ; \
    done ; \
done
ls -l debian/tmp/usr/bin
total 121284
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 abi-dump -> abi-dump.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 abi-dump.3 -> abi-dump.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   311192 May 20 03:06 abi-dump.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 abi-load -> abi-load.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 abi-load.3 -> abi-load.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   866128 May 20 03:06 abi-load.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 May 20 03:16 align-cache -> align-cache.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       17 May 20 03:16 align-cache.3 -> align-cache.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   285320 May 20 03:06 align-cache.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       12 May 20 03:16 align-info -> align-info.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 May 20 03:16 align-info.3 -> align-info.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   112752 May 20 03:06 align-info.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 bam-load -> bam-load.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 bam-load.3 -> bam-load.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1 14283088 May 20 03:08 bam-load.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       11 May 20 03:16 cache-mgr -> cache-mgr.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 May 20 03:16 cache-mgr.3 -> cache-mgr.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   132880 May 20 03:06 cache-mgr.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       11 May 20 03:16 ccextract -> ccextract.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 May 20 03:16 ccextract.3 -> ccextract.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   319096 May 20 03:06 ccextract.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1        9 May 20 03:16 cg-load -> cg-load.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 May 20 03:16 cg-load.3 -> cg-load.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   692576 May 20 03:06 cg-load.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 May 20 03:16 check-corrupt -> check-corrupt.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       19 May 20 03:16 check-corrupt.3 -> check-corrupt.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   294032 May 20 03:06 check-corrupt.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 check-redact -> check-redact.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       18 May 20 03:16 check-redact.3 -> check-redact.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   112672 May 20 03:06 check-redact.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       18 May 20 03:16 compute-coverage -> compute-coverage.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       22 May 20 03:16 compute-coverage-ngs -> compute-coverage-ngs.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       26 May 20 03:16 compute-coverage-ngs.3 -> compute-coverage-ngs.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1  2316720 May 20 03:09 compute-coverage-ngs.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       22 May 20 03:16 compute-coverage.3 -> compute-coverage.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   146144 May 20 03:06 compute-coverage.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1        9 May 20 03:16 copycat -> copycat.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 May 20 03:16 copycat.3 -> copycat.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   553328 May 20 03:07 copycat.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 crc32sum -> crc32sum.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 crc32sum.3 -> crc32sum.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1    99496 May 20 03:07 crc32sum.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       22 May 20 03:16 dump-blob-boundaries -> dump-blob-boundaries.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       26 May 20 03:16 dump-blob-boundaries.3 -> dump-blob-boundaries.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1    87224 May 20 03:06 dump-blob-boundaries.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 May 20 03:16 dump-ref-fasta -> dump-ref-fasta.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       20 May 20 03:16 dump-ref-fasta.3 -> dump-ref-fasta.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1  2188608 May 20 03:09 dump-ref-fasta.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 fastconv -> fastconv.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 fastconv.3 -> fastconv.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1  5172888 May 20 03:09 fastconv.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 fasterq-dump -> fasterq-dump.3
-rwxr-xr-x 1 pbuilder1 pbuilder1   973104 May 20 03:07 fasterq-dump-orig.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       18 May 20 03:16 fasterq-dump.3 -> fasterq-dump.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 fasterq-dump.3.2.1 -> sratools.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       12 May 20 03:16 fastq-dump -> fastq-dump.3
-rwxr-xr-x 1 pbuilder1 pbuilder1   370840 May 20 03:06 fastq-dump-orig.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 May 20 03:16 fastq-dump.3 -> fastq-dump.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 fastq-dump.3.2.1 -> sratools.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       12 May 20 03:16 fastq-load -> fastq-load.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 May 20 03:16 fastq-load.3 -> fastq-load.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   906160 May 20 03:06 fastq-load.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 May 20 03:16 general-loader -> general-loader.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       20 May 20 03:16 general-loader.3 -> general-loader.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1  1631520 May 20 03:06 general-loader.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 helicos-load -> helicos-load.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       18 May 20 03:16 helicos-load.3 -> helicos-load.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   840688 May 20 03:06 helicos-load.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 May 20 03:16 illumina-dump -> illumina-dump.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       19 May 20 03:16 illumina-dump.3 -> illumina-dump.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   295952 May 20 03:06 illumina-dump.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 May 20 03:16 illumina-load -> illumina-load.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       19 May 20 03:16 illumina-load.3 -> illumina-load.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   872704 May 20 03:06 illumina-load.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1        5 May 20 03:16 kar -> kar.3
lrwxrwxrwx 1 pbuilder1 pbuilder1        6 May 20 03:16 kar+ -> kar+.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 kar+.3 -> kar+.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   283696 May 20 03:06 kar+.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 kar+meta -> kar+meta.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 kar+meta.3 -> kar+meta.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   163576 May 20 03:06 kar+meta.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1        9 May 20 03:16 kar.3 -> kar.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   244776 May 20 03:06 kar.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       11 May 20 03:16 kdb-index -> kdb-index.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 May 20 03:16 kdb-index.3 -> kdb-index.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1    98128 May 20 03:07 kdb-index.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1        9 May 20 03:16 kdbmeta -> kdbmeta.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 May 20 03:16 kdbmeta.3 -> kdbmeta.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   126408 May 20 03:06 kdbmeta.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       11 May 20 03:16 latf-load -> latf-load.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 May 20 03:16 latf-load.3 -> latf-load.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   561504 May 20 03:08 latf-load.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       18 May 20 03:16 make-read-filter -> make-read-filter.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       22 May 20 03:16 make-read-filter.3 -> make-read-filter.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   224240 May 20 03:06 make-read-filter.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1        7 May 20 03:16 md5cp -> md5cp.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       11 May 20 03:16 md5cp.3 -> md5cp.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   109456 May 20 03:06 md5cp.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 meta-cmp -> meta-cmp.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 meta-cmp.3 -> meta-cmp.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   101352 May 20 03:06 meta-cmp.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       11 May 20 03:16 meta-copy -> meta-copy.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 May 20 03:16 meta-copy.3 -> meta-copy.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   101328 May 20 03:06 meta-copy.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 May 20 03:16 meta-repair -> meta-repair.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       17 May 20 03:16 meta-repair.3 -> meta-repair.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   200928 May 20 03:07 meta-repair.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       12 May 20 03:16 ngs-pileup -> ngs-pileup.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 May 20 03:16 ngs-pileup.3 -> ngs-pileup.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1  2684832 May 20 03:08 ngs-pileup.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 May 20 03:16 pacbio-correct -> pacbio-correct.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       20 May 20 03:16 pacbio-correct.3 -> pacbio-correct.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1    95200 May 20 03:07 pacbio-correct.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 May 20 03:16 pacbio-load -> pacbio-load.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       17 May 20 03:16 pacbio-load.3 -> pacbio-load.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   540128 May 20 03:06 pacbio-load.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 May 20 03:16 pacbio-loadxml -> pacbio-loadxml.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       20 May 20 03:16 pacbio-loadxml.3 -> pacbio-loadxml.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   827816 May 20 03:06 pacbio-loadxml.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 pileup-stats -> pileup-stats.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       18 May 20 03:16 pileup-stats.3 -> pileup-stats.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1  2878752 May 20 03:09 pileup-stats.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 prefetch -> prefetch.3
-rwxr-xr-x 1 pbuilder1 pbuilder1   524064 May 20 03:06 prefetch-orig.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 prefetch.3 -> prefetch.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 prefetch.3.2.1 -> sratools.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       11 May 20 03:16 rcexplain -> rcexplain.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 May 20 03:16 rcexplain.3 -> rcexplain.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1    90840 May 20 03:06 rcexplain.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       20 May 20 03:16 read-filter-redact -> read-filter-redact.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       24 May 20 03:16 read-filter-redact.3 -> read-filter-redact.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   123296 May 20 03:07 read-filter-redact.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 May 20 03:16 ref-variation -> ref-variation.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       19 May 20 03:16 ref-variation.3 -> ref-variation.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1  3035216 May 20 03:09 ref-variation.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 rowwritetest -> rowwritetest.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       18 May 20 03:16 rowwritetest.3 -> rowwritetest.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   108288 May 20 03:07 rowwritetest.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 sam-dump -> sam-dump.3
-rwxr-xr-x 1 pbuilder1 pbuilder1   889248 May 20 03:06 sam-dump-orig.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 sam-dump.3 -> sam-dump.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 sam-dump.3.2.1 -> sratools.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1        9 May 20 03:16 samview -> samview.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 samview-util -> samview-util.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       18 May 20 03:16 samview-util.3 -> samview-util.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1    87576 May 20 03:07 samview-util.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 May 20 03:16 samview.3 -> samview.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   304448 May 20 03:06 samview.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 May 20 03:16 schema-replace -> schema-replace.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       20 May 20 03:16 schema-replace.3 -> schema-replace.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   102136 May 20 03:07 schema-replace.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 sff-dump -> sff-dump.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 sff-dump.3 -> sff-dump.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   283376 May 20 03:06 sff-dump.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 sff-load -> sff-load.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 sff-load.3 -> sff-load.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   872208 May 20 03:06 sff-load.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1        7 May 20 03:16 sharq -> sharq.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       11 May 20 03:16 sharq.3 -> sharq.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1 44803576 May 20 03:12 sharq.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 sortreadtest -> sortreadtest.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       18 May 20 03:16 sortreadtest.3 -> sortreadtest.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1    99024 May 20 03:07 sortreadtest.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 sra-info -> sra-info.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 sra-info.3 -> sra-info.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1  2767800 May 20 03:07 sra-info.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       12 May 20 03:16 sra-pileup -> sra-pileup.3
-rwxr-xr-x 1 pbuilder1 pbuilder1   458680 May 20 03:06 sra-pileup-orig.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 May 20 03:16 sra-pileup.3 -> sra-pileup.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 sra-pileup.3.2.1 -> sratools.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       12 May 20 03:16 sra-search -> sra-search.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 May 20 03:16 sra-search.3 -> sra-search.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1  4307120 May 20 03:09 sra-search.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 sra-sort -> sra-sort.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 May 20 03:16 sra-sort-cg -> sra-sort-cg.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       17 May 20 03:16 sra-sort-cg.3 -> sra-sort-cg.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   851616 May 20 03:06 sra-sort-cg.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 sra-sort.3 -> sra-sort.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   851648 May 20 03:06 sra-sort.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 sra-stat -> sra-stat.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 sra-stat.3 -> sra-stat.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   354352 May 20 03:06 sra-stat.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1        9 May 20 03:16 srapath -> srapath.3
-rwxr-xr-x 1 pbuilder1 pbuilder1   296360 May 20 03:06 srapath-orig.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 May 20 03:16 srapath.3 -> srapath.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 srapath.3.2.1 -> sratools.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 sratools -> sratools.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 sratools.3 -> sratools.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1  5396912 May 20 03:07 sratools.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 srf-load -> srf-load.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 srf-load.3 -> srf-load.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1  1016896 May 20 03:06 srf-load.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       15 May 20 03:16 test-download -> test-download.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       19 May 20 03:16 test-download.3 -> test-download.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   108952 May 20 03:07 test-download.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       24 May 20 03:16 test-read-write-cursor -> test-read-write-cursor.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       28 May 20 03:16 test-read-write-cursor.3 -> test-read-write-cursor.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1    94864 May 20 03:07 test-read-write-cursor.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 test-sra -> test-sra.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 test-sra.3 -> test-sra.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   354608 May 20 03:06 test-sra.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1        8 May 20 03:16 testld -> testld.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       12 May 20 03:16 testld.3 -> testld.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1    95888 May 20 03:07 testld.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1        9 May 20 03:16 txt2kdb -> txt2kdb.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 May 20 03:16 txt2kdb.3 -> txt2kdb.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   102320 May 20 03:07 txt2kdb.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       12 May 20 03:16 var-expand -> var-expand.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 May 20 03:16 var-expand.3 -> var-expand.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1  2117704 May 20 03:08 var-expand.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       12 May 20 03:16 vdb-config -> vdb-config.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 May 20 03:16 vdb-config.3 -> vdb-config.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1  2683928 May 20 03:08 vdb-config.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 vdb-copy -> vdb-copy.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 vdb-copy.3 -> vdb-copy.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   356728 May 20 03:07 vdb-copy.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 May 20 03:16 vdb-decrypt -> vdb-decrypt.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       17 May 20 03:16 vdb-decrypt.3 -> vdb-decrypt.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   194312 May 20 03:06 vdb-decrypt.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 vdb-diff -> vdb-diff.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 vdb-diff.3 -> vdb-diff.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   225368 May 20 03:07 vdb-diff.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 vdb-dump -> vdb-dump.3
-rwxr-xr-x 1 pbuilder1 pbuilder1   936760 May 20 03:06 vdb-dump-orig.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 vdb-dump.3 -> vdb-dump.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 vdb-dump.3.2.1 -> sratools.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 May 20 03:16 vdb-encrypt -> vdb-encrypt.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       17 May 20 03:16 vdb-encrypt.3 -> vdb-encrypt.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   127320 May 20 03:06 vdb-encrypt.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       10 May 20 03:16 vdb-lock -> vdb-lock.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 vdb-lock.3 -> vdb-lock.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1    91648 May 20 03:06 vdb-lock.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1        9 May 20 03:16 vdb-sql -> vdb-sql.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       13 May 20 03:16 vdb-sql.3 -> vdb-sql.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1  5426240 May 20 03:09 vdb-sql.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       12 May 20 03:16 vdb-unlock -> vdb-unlock.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       16 May 20 03:16 vdb-unlock.3 -> vdb-unlock.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1    91672 May 20 03:06 vdb-unlock.3.2.1
lrwxrwxrwx 1 pbuilder1 pbuilder1       14 May 20 03:16 vdb-validate -> vdb-validate.3
lrwxrwxrwx 1 pbuilder1 pbuilder1       18 May 20 03:16 vdb-validate.3 -> vdb-validate.3.2.1
-rwxr-xr-x 1 pbuilder1 pbuilder1   288808 May 20 03:06 vdb-validate.3.2.1
cd debian/tmp/usr/bin && \
for bin in *-orig.* ; do \
    base=${bin%-orig.*} && \
    vbase=$(readlink "$(readlink $base)") && \
    vdriver=$(readlink "$vbase") && \
    mv -v $bin $base-orig && \
    ln -snfv ${vdriver%%.[0-9]*} $vbase || exit $? ; \
done && \
for bin in *[a-z+] ; do \
    bin2=$(readlink $bin) ; \
    bin3=$(readlink "$bin2") ; \
    case $bin2 in \
        $bin.* ) rm -v $bin2 && mv -v $bin3 $bin || exit $? ;; \
    esac ; \
done
renamed 'fasterq-dump-orig.3.2.1' -> 'fasterq-dump-orig'
'fasterq-dump.3.2.1' -> 'sratools'
renamed 'fastq-dump-orig.3.2.1' -> 'fastq-dump-orig'
'fastq-dump.3.2.1' -> 'sratools'
renamed 'prefetch-orig.3.2.1' -> 'prefetch-orig'
'prefetch.3.2.1' -> 'sratools'
renamed 'sam-dump-orig.3.2.1' -> 'sam-dump-orig'
'sam-dump.3.2.1' -> 'sratools'
renamed 'sra-pileup-orig.3.2.1' -> 'sra-pileup-orig'
'sra-pileup.3.2.1' -> 'sratools'
renamed 'srapath-orig.3.2.1' -> 'srapath-orig'
'srapath.3.2.1' -> 'sratools'
renamed 'vdb-dump-orig.3.2.1' -> 'vdb-dump-orig'
'vdb-dump.3.2.1' -> 'sratools'
removed 'abi-dump.3'
renamed 'abi-dump.3.2.1' -> 'abi-dump'
removed 'abi-load.3'
renamed 'abi-load.3.2.1' -> 'abi-load'
removed 'align-cache.3'
renamed 'align-cache.3.2.1' -> 'align-cache'
removed 'align-info.3'
renamed 'align-info.3.2.1' -> 'align-info'
removed 'bam-load.3'
renamed 'bam-load.3.2.1' -> 'bam-load'
removed 'cache-mgr.3'
renamed 'cache-mgr.3.2.1' -> 'cache-mgr'
removed 'ccextract.3'
renamed 'ccextract.3.2.1' -> 'ccextract'
removed 'cg-load.3'
renamed 'cg-load.3.2.1' -> 'cg-load'
removed 'check-corrupt.3'
renamed 'check-corrupt.3.2.1' -> 'check-corrupt'
removed 'check-redact.3'
renamed 'check-redact.3.2.1' -> 'check-redact'
removed 'compute-coverage.3'
renamed 'compute-coverage.3.2.1' -> 'compute-coverage'
removed 'compute-coverage-ngs.3'
renamed 'compute-coverage-ngs.3.2.1' -> 'compute-coverage-ngs'
removed 'copycat.3'
renamed 'copycat.3.2.1' -> 'copycat'
removed 'crc32sum.3'
renamed 'crc32sum.3.2.1' -> 'crc32sum'
removed 'dump-blob-boundaries.3'
renamed 'dump-blob-boundaries.3.2.1' -> 'dump-blob-boundaries'
removed 'dump-ref-fasta.3'
renamed 'dump-ref-fasta.3.2.1' -> 'dump-ref-fasta'
removed 'fastconv.3'
renamed 'fastconv.3.2.1' -> 'fastconv'
removed 'fasterq-dump.3'
renamed 'fasterq-dump.3.2.1' -> 'fasterq-dump'
removed 'fastq-dump.3'
renamed 'fastq-dump.3.2.1' -> 'fastq-dump'
removed 'fastq-load.3'
renamed 'fastq-load.3.2.1' -> 'fastq-load'
removed 'general-loader.3'
renamed 'general-loader.3.2.1' -> 'general-loader'
removed 'helicos-load.3'
renamed 'helicos-load.3.2.1' -> 'helicos-load'
removed 'illumina-dump.3'
renamed 'illumina-dump.3.2.1' -> 'illumina-dump'
removed 'illumina-load.3'
renamed 'illumina-load.3.2.1' -> 'illumina-load'
removed 'kar.3'
renamed 'kar.3.2.1' -> 'kar'
removed 'kar+.3'
renamed 'kar+.3.2.1' -> 'kar+'
removed 'kar+meta.3'
renamed 'kar+meta.3.2.1' -> 'kar+meta'
removed 'kdb-index.3'
renamed 'kdb-index.3.2.1' -> 'kdb-index'
removed 'kdbmeta.3'
renamed 'kdbmeta.3.2.1' -> 'kdbmeta'
removed 'latf-load.3'
renamed 'latf-load.3.2.1' -> 'latf-load'
removed 'make-read-filter.3'
renamed 'make-read-filter.3.2.1' -> 'make-read-filter'
removed 'md5cp.3'
renamed 'md5cp.3.2.1' -> 'md5cp'
removed 'meta-cmp.3'
renamed 'meta-cmp.3.2.1' -> 'meta-cmp'
removed 'meta-copy.3'
renamed 'meta-copy.3.2.1' -> 'meta-copy'
removed 'meta-repair.3'
renamed 'meta-repair.3.2.1' -> 'meta-repair'
removed 'ngs-pileup.3'
renamed 'ngs-pileup.3.2.1' -> 'ngs-pileup'
removed 'pacbio-correct.3'
renamed 'pacbio-correct.3.2.1' -> 'pacbio-correct'
removed 'pacbio-load.3'
renamed 'pacbio-load.3.2.1' -> 'pacbio-load'
removed 'pacbio-loadxml.3'
renamed 'pacbio-loadxml.3.2.1' -> 'pacbio-loadxml'
removed 'pileup-stats.3'
renamed 'pileup-stats.3.2.1' -> 'pileup-stats'
removed 'prefetch.3'
renamed 'prefetch.3.2.1' -> 'prefetch'
removed 'rcexplain.3'
renamed 'rcexplain.3.2.1' -> 'rcexplain'
removed 'read-filter-redact.3'
renamed 'read-filter-redact.3.2.1' -> 'read-filter-redact'
removed 'ref-variation.3'
renamed 'ref-variation.3.2.1' -> 'ref-variation'
removed 'rowwritetest.3'
renamed 'rowwritetest.3.2.1' -> 'rowwritetest'
removed 'sam-dump.3'
renamed 'sam-dump.3.2.1' -> 'sam-dump'
removed 'samview.3'
renamed 'samview.3.2.1' -> 'samview'
removed 'samview-util.3'
renamed 'samview-util.3.2.1' -> 'samview-util'
removed 'schema-replace.3'
renamed 'schema-replace.3.2.1' -> 'schema-replace'
removed 'sff-dump.3'
renamed 'sff-dump.3.2.1' -> 'sff-dump'
removed 'sff-load.3'
renamed 'sff-load.3.2.1' -> 'sff-load'
removed 'sharq.3'
renamed 'sharq.3.2.1' -> 'sharq'
removed 'sortreadtest.3'
renamed 'sortreadtest.3.2.1' -> 'sortreadtest'
removed 'sra-info.3'
renamed 'sra-info.3.2.1' -> 'sra-info'
removed 'sra-pileup.3'
renamed 'sra-pileup.3.2.1' -> 'sra-pileup'
removed 'sra-search.3'
renamed 'sra-search.3.2.1' -> 'sra-search'
removed 'sra-sort.3'
renamed 'sra-sort.3.2.1' -> 'sra-sort'
removed 'sra-sort-cg.3'
renamed 'sra-sort-cg.3.2.1' -> 'sra-sort-cg'
removed 'sra-stat.3'
renamed 'sra-stat.3.2.1' -> 'sra-stat'
removed 'srapath.3'
renamed 'srapath.3.2.1' -> 'srapath'
removed 'sratools.3'
renamed 'sratools.3.2.1' -> 'sratools'
removed 'srf-load.3'
renamed 'srf-load.3.2.1' -> 'srf-load'
removed 'test-download.3'
renamed 'test-download.3.2.1' -> 'test-download'
removed 'test-read-write-cursor.3'
renamed 'test-read-write-cursor.3.2.1' -> 'test-read-write-cursor'
removed 'test-sra.3'
renamed 'test-sra.3.2.1' -> 'test-sra'
removed 'testld.3'
renamed 'testld.3.2.1' -> 'testld'
removed 'txt2kdb.3'
renamed 'txt2kdb.3.2.1' -> 'txt2kdb'
removed 'var-expand.3'
renamed 'var-expand.3.2.1' -> 'var-expand'
removed 'vdb-config.3'
renamed 'vdb-config.3.2.1' -> 'vdb-config'
removed 'vdb-copy.3'
renamed 'vdb-copy.3.2.1' -> 'vdb-copy'
removed 'vdb-decrypt.3'
renamed 'vdb-decrypt.3.2.1' -> 'vdb-decrypt'
removed 'vdb-diff.3'
renamed 'vdb-diff.3.2.1' -> 'vdb-diff'
removed 'vdb-dump.3'
renamed 'vdb-dump.3.2.1' -> 'vdb-dump'
removed 'vdb-encrypt.3'
renamed 'vdb-encrypt.3.2.1' -> 'vdb-encrypt'
removed 'vdb-lock.3'
renamed 'vdb-lock.3.2.1' -> 'vdb-lock'
removed 'vdb-sql.3'
renamed 'vdb-sql.3.2.1' -> 'vdb-sql'
removed 'vdb-unlock.3'
renamed 'vdb-unlock.3.2.1' -> 'vdb-unlock'
removed 'vdb-validate.3'
renamed 'vdb-validate.3.2.1' -> 'vdb-validate'
mkdir debian/tmp/usr/lib/sra-toolkit
mv debian/tmp/usr/bin/sratools debian/tmp/usr/lib/sra-toolkit
for x in debian/tmp/usr/bin/*-orig; do \
    mv -v $x debian/tmp/usr/lib/sra-toolkit ; \
    ln -snfv ../lib/sra-toolkit/sratools ${x%-orig} ; \
done
renamed 'debian/tmp/usr/bin/fasterq-dump-orig' -> 'debian/tmp/usr/lib/sra-toolkit/fasterq-dump-orig'
'debian/tmp/usr/bin/fasterq-dump' -> '../lib/sra-toolkit/sratools'
renamed 'debian/tmp/usr/bin/fastq-dump-orig' -> 'debian/tmp/usr/lib/sra-toolkit/fastq-dump-orig'
'debian/tmp/usr/bin/fastq-dump' -> '../lib/sra-toolkit/sratools'
renamed 'debian/tmp/usr/bin/prefetch-orig' -> 'debian/tmp/usr/lib/sra-toolkit/prefetch-orig'
'debian/tmp/usr/bin/prefetch' -> '../lib/sra-toolkit/sratools'
renamed 'debian/tmp/usr/bin/sam-dump-orig' -> 'debian/tmp/usr/lib/sra-toolkit/sam-dump-orig'
'debian/tmp/usr/bin/sam-dump' -> '../lib/sra-toolkit/sratools'
renamed 'debian/tmp/usr/bin/sra-pileup-orig' -> 'debian/tmp/usr/lib/sra-toolkit/sra-pileup-orig'
'debian/tmp/usr/bin/sra-pileup' -> '../lib/sra-toolkit/sratools'
renamed 'debian/tmp/usr/bin/srapath-orig' -> 'debian/tmp/usr/lib/sra-toolkit/srapath-orig'
'debian/tmp/usr/bin/srapath' -> '../lib/sra-toolkit/sratools'
renamed 'debian/tmp/usr/bin/vdb-dump-orig' -> 'debian/tmp/usr/lib/sra-toolkit/vdb-dump-orig'
'debian/tmp/usr/bin/vdb-dump' -> '../lib/sra-toolkit/sratools'
dh_install
# remove susipcious file which is not executable and conflicts with package magic
rm -f debian/*/usr/bin/magic
pybuild --install --name ngs -d ngs/ngs-python -s distutils
I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs 
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` directly.
        Instead, use pypa/build, pypa/installer or other
        standards-based tools.

        See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
        ********************************************************************************

!!
  self.initialize_options()
running build
running build_py
creating /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/LibManager.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/__init__.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/String.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/Statistics.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/ReferenceSequence.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/ReferenceIterator.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/Reference.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/Refcount.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/ReadIterator.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/ReadGroupIterator.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/ReadGroup.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/ReadCollection.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/Read.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/PileupIterator.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/PileupEventIterator.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/PileupEvent.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/Pileup.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/Package.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/LibChecker.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/FragmentIterator.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/Fragment.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/ErrorMsg.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/AlignmentIterator.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
copying ngs/Alignment.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs
running install_lib
creating /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages
creating /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/Alignment.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/AlignmentIterator.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/ErrorMsg.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/Fragment.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/FragmentIterator.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/LibChecker.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/Package.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/Pileup.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/PileupEvent.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/PileupEventIterator.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/PileupIterator.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/Read.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/ReadCollection.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/ReadGroup.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/ReadGroupIterator.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/ReadIterator.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/Refcount.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/Reference.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/ReferenceIterator.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/ReferenceSequence.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/Statistics.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/String.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/__init__.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
copying /build/reproducible-path/sra-sdk-3.2.1+dfsg/.pybuild/cpython3_3.13_ngs/build/ngs/LibManager.py -> /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/Alignment.py to Alignment.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/AlignmentIterator.py to AlignmentIterator.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/ErrorMsg.py to ErrorMsg.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/Fragment.py to Fragment.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/FragmentIterator.py to FragmentIterator.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/LibChecker.py to LibChecker.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/Package.py to Package.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/Pileup.py to Pileup.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/PileupEvent.py to PileupEvent.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/PileupEventIterator.py to PileupEventIterator.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/PileupIterator.py to PileupIterator.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/Read.py to Read.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/ReadCollection.py to ReadCollection.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/ReadGroup.py to ReadGroup.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/ReadGroupIterator.py to ReadGroupIterator.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/ReadIterator.py to ReadIterator.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/Refcount.py to Refcount.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/Reference.py to Reference.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/ReferenceIterator.py to ReferenceIterator.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/ReferenceSequence.py to ReferenceSequence.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/Statistics.py to Statistics.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/String.py to String.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs/LibManager.py to LibManager.cpython-313.pyc
running install_egg_info
running egg_info
writing ngs.egg-info/PKG-INFO
writing dependency_links to ngs.egg-info/dependency_links.txt
writing top-level names to ngs.egg-info/top_level.txt
reading manifest file 'ngs.egg-info/SOURCES.txt'
writing manifest file 'ngs.egg-info/SOURCES.txt'
Copying ngs.egg-info to /build/reproducible-path/sra-sdk-3.2.1+dfsg/debian/python3-ngs/usr/lib/python3.13/dist-packages/ngs-1.0.egg-info
Skipping SOURCES.txt
running install_scripts
make[1]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg'
   jh_installjavadoc -O--buildsystem=cmake
Duplicate specification "A" for option "A"
   dh_installdocs -O--buildsystem=cmake
   dh_installchangelogs -O--buildsystem=cmake
   debian/rules override_dh_installexamples
make[1]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg'
dh_installexamples
find debian/*/ -name .gitignore -delete
make[1]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg'
   dh_python3 -O--buildsystem=cmake
   dh_installsystemduser -O--buildsystem=cmake
   dh_lintian -O--buildsystem=cmake
   dh_perl -O--buildsystem=cmake
   debian/rules execute_before_dh_link
make[1]: Entering directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg'
# Putting the upstream version number (without the dfsg part) at the end of
# symlink source in the -jni package.
sed -e 's/\(#STRIPPED_UPSTREAM_VERSION#\)/\13.2.1+dfsg/' \
    -e 's/#STRIPPED_UPSTREAM_VERSION#\(.*\)+dfsg[0-9]*/\1/' \
    -e 's/\$[({]DEB_HOST_MULTIARCH[)}]/aarch64-linux-gnu/g' \
    debian/libngs-jni.links.in > debian/libngs-jni.links
make[1]: Leaving directory '/build/reproducible-path/sra-sdk-3.2.1+dfsg'
   dh_link -O--buildsystem=cmake
   jh_installlibs -O--buildsystem=cmake
   jh_classpath -O--buildsystem=cmake
   jh_manifest -O--buildsystem=cmake
Duplicate specification "V:s" for option "V"
   jh_exec -O--buildsystem=cmake
   jh_depends -O--buildsystem=cmake
   mh_installpoms -O--buildsystem=cmake
   mh_linkjars --skip-clean-poms -O--buildsystem=cmake
   dh_strip_nondeterminism -O--buildsystem=cmake
   dh_compress -O--buildsystem=cmake
   dh_fixperms -O--buildsystem=cmake
   dh_missing -O--buildsystem=cmake
   dh_dwz -a -O--buildsystem=cmake
   dh_strip -a -O--buildsystem=cmake
   dh_makeshlibs -a -O--buildsystem=cmake
   dh_shlibdeps -a -O--buildsystem=cmake
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 from: /lib/ld-linux-aarch64.so.1
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 from: /lib/ld-linux-aarch64.so.1
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged
dpkg-shlibdeps: warning: symbol KClientHttpRequestGET used by debian/libngs-c++3/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.2.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol KNamelistCount used by debian/libngs-c++3/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.2.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol xcSelfNull used by debian/libngs-c++3/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.2.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol KDBManagerMakeRead used by debian/libngs-c++3/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.2.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol VCursorIdRange used by debian/libngs-c++3/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.2.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol xcColumnEmpty used by debian/libngs-c++3/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.2.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol VDatabaseAddRef used by debian/libngs-c++3/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.2.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol KRsrcGlobalWhack used by debian/libngs-c++3/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.2.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol string_match used by debian/libngs-c++3/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.2.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol KDataBufferResize used by debian/libngs-c++3/usr/lib/aarch64-linux-gnu/libngs-c++.so.3.2.1 found in none of the libraries
dpkg-shlibdeps: warning: 133 other similar warnings have been skipped (use -v to see them all)
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 from: /lib/ld-linux-aarch64.so.1
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged
   dh_installdeb -O--buildsystem=cmake
   dh_gencontrol -O--buildsystem=cmake
dpkg-gencontrol: warning: Depends field of package libngs-jni: substitution variable ${shlibs:Depends} used, but is not defined
dpkg-gencontrol: warning: package libncbi-ngs-dev: substitution variable ${devlibs:Depends} unused, but is defined
   dh_md5sums -O--buildsystem=cmake
   dh_builddeb -O--buildsystem=cmake
dpkg-deb: building package 'sra-toolkit' in '../sra-toolkit_3.2.1+dfsg-4_arm64.deb'.
dpkg-deb: building package 'libngs-jni' in '../libngs-jni_3.2.1+dfsg-4_arm64.deb'.
dpkg-deb: building package 'libncbi-ngs-dev' in '../libncbi-ngs-dev_3.2.1+dfsg-4_arm64.deb'.
dpkg-deb: building package 'python3-ngs' in '../python3-ngs_3.2.1+dfsg-4_all.deb'.
dpkg-deb: building package 'libncbi-ngs3-dbgsym' in '../libncbi-ngs3-dbgsym_3.2.1+dfsg-4_arm64.deb'.
dpkg-deb: building package 'libngs-c++3' in '../libngs-c++3_3.2.1+dfsg-4_arm64.deb'.
dpkg-deb: building package 'libngs-c++3-dbgsym' in '../libngs-c++3-dbgsym_3.2.1+dfsg-4_arm64.deb'.
dpkg-deb: building package 'libncbi-ngs3' in '../libncbi-ngs3_3.2.1+dfsg-4_arm64.deb'.
dpkg-deb: building package 'libngs-c++-dev' in '../libngs-c++-dev_3.2.1+dfsg-4_arm64.deb'.
dpkg-deb: building package 'libngs-java-doc' in '../libngs-java-doc_3.2.1+dfsg-4_all.deb'.
dpkg-deb: building package 'libngs-java' in '../libngs-java_3.2.1+dfsg-4_arm64.deb'.
dpkg-deb: building package 'sra-toolkit-dbgsym' in '../sra-toolkit-dbgsym_3.2.1+dfsg-4_arm64.deb'.
 dpkg-genbuildinfo --build=binary -O../sra-sdk_3.2.1+dfsg-4_arm64.buildinfo
 dpkg-genchanges --build=binary -O../sra-sdk_3.2.1+dfsg-4_arm64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env 
I: removing directory /srv/workspace/pbuilder/3233477 and its subdirectories
I: Current time: Wed May 20 03:17:56 -12 2026
I: pbuilder-time-stamp: 1779290276