I: pbuilder: network access will be disabled during build I: Current time: Sun Apr 13 09:36:58 -12 2025 I: pbuilder-time-stamp: 1744580218 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [adapterremoval_2.3.4-1.dsc] I: copying [./adapterremoval_2.3.4.orig.tar.gz] I: copying [./adapterremoval_2.3.4-1.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./adapterremoval_2.3.4-1.dsc: unsupported subcommand dpkg-source: info: extracting adapterremoval in adapterremoval-2.3.4 dpkg-source: info: unpacking adapterremoval_2.3.4.orig.tar.gz dpkg-source: info: unpacking adapterremoval_2.3.4-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying privacy-breaches.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/28067/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='f82b2184351d4a679352c1dcddaada8d' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='28067' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.gfDhDYy8/pbuilderrc_hodW --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.gfDhDYy8/b1 --logfile b1/build.log adapterremoval_2.3.4-1.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux ff4a 6.1.0-33-armmp-lpae #1 SMP Debian 6.1.133-1 (2025-04-10) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin I: user script /srv/workspace/pbuilder/28067/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), zlib1g-dev, libbz2-dev, libgtest-dev, discount dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19566 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libbz2-dev; however: Package libbz2-dev is not installed. pbuilder-satisfydepends-dummy depends on libgtest-dev; however: Package libgtest-dev is not installed. pbuilder-satisfydepends-dummy depends on discount; however: Package discount is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} discount{a} dwz{a} file{a} gettext{a} gettext-base{a} googletest{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbz2-dev{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libgtest-dev{a} libmagic-mgc{a} libmagic1t64{a} libmarkdown2{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 35 newly installed, 0 to remove and 0 not upgraded. Need to get 12.5 MB of archives. After unpacking 47.4 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main armhf sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian unstable/main armhf libmagic-mgc armhf 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian unstable/main armhf libmagic1t64 armhf 1:5.46-5 [100 kB] Get: 4 http://deb.debian.org/debian unstable/main armhf file armhf 1:5.46-5 [42.8 kB] Get: 5 http://deb.debian.org/debian unstable/main armhf gettext-base armhf 0.23.1-1 [238 kB] Get: 6 http://deb.debian.org/debian unstable/main armhf libuchardet0 armhf 0.0.8-1+b2 [65.6 kB] Get: 7 http://deb.debian.org/debian unstable/main armhf groff-base armhf 1.23.0-7 [1095 kB] Get: 8 http://deb.debian.org/debian unstable/main armhf bsdextrautils armhf 2.41-4 [86.5 kB] Get: 9 http://deb.debian.org/debian unstable/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB] Get: 10 http://deb.debian.org/debian unstable/main armhf man-db armhf 2.13.0-1 [1382 kB] Get: 11 http://deb.debian.org/debian unstable/main armhf m4 armhf 1.4.19-7 [272 kB] Get: 12 http://deb.debian.org/debian unstable/main armhf autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian unstable/main armhf autotools-dev all 20240727.1 [60.2 kB] Get: 14 http://deb.debian.org/debian unstable/main armhf automake all 1:1.17-4 [862 kB] Get: 15 http://deb.debian.org/debian unstable/main armhf autopoint all 0.23.1-1 [770 kB] Get: 16 http://deb.debian.org/debian unstable/main armhf libdebhelper-perl all 13.24.2 [90.9 kB] Get: 17 http://deb.debian.org/debian unstable/main armhf libtool all 2.5.4-4 [539 kB] Get: 18 http://deb.debian.org/debian unstable/main armhf dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian unstable/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian unstable/main armhf libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 21 http://deb.debian.org/debian unstable/main armhf dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 22 http://deb.debian.org/debian unstable/main armhf libelf1t64 armhf 0.192-4 [184 kB] Get: 23 http://deb.debian.org/debian unstable/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 24 http://deb.debian.org/debian unstable/main armhf libunistring5 armhf 1.3-2 [441 kB] Get: 25 http://deb.debian.org/debian unstable/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.4 [604 kB] Get: 26 http://deb.debian.org/debian unstable/main armhf gettext armhf 0.23.1-1 [1560 kB] Get: 27 http://deb.debian.org/debian unstable/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian unstable/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian unstable/main armhf debhelper all 13.24.2 [919 kB] Get: 30 http://deb.debian.org/debian unstable/main armhf libmarkdown2 armhf 2.2.7-2.1 [29.0 kB] Get: 31 http://deb.debian.org/debian unstable/main armhf discount armhf 2.2.7-2.1 [21.4 kB] Get: 32 http://deb.debian.org/debian unstable/main armhf googletest all 1.16.0-1 [517 kB] Get: 33 http://deb.debian.org/debian unstable/main armhf libbz2-dev armhf 1.0.8-6 [28.7 kB] Get: 34 http://deb.debian.org/debian unstable/main armhf libgtest-dev armhf 1.16.0-1 [246 kB] Get: 35 http://deb.debian.org/debian unstable/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1+b1 [905 kB] Fetched 12.5 MB in 1s (14.7 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19566 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_armhf.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../02-libmagic1t64_1%3a5.46-5_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.46-5_armhf.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-1_armhf.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-7_armhf.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.41-4_armhf.deb ... Unpacking bsdextrautils (2.41-4) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../08-libpipeline1_1.5.8-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_armhf.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-7_armhf.deb ... Unpacking m4 (1.4.19-7) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.24.2_all.deb ... Unpacking libdebhelper-perl (13.24.2) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-4_all.deb ... Unpacking libtool (2.5.4-4) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:armhf. Preparing to unpack .../21-libelf1t64_0.192-4_armhf.deb ... Unpacking libelf1t64:armhf (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b2_armhf.deb ... Unpacking dwz (0.15-1+b2) ... Selecting previously unselected package libunistring5:armhf. Preparing to unpack .../23-libunistring5_1.3-2_armhf.deb ... Unpacking libunistring5:armhf (1.3-2) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.4_armhf.deb ... Unpacking libxml2:armhf (2.12.7+dfsg+really2.9.14-0.4) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.23.1-1_armhf.deb ... Unpacking gettext (0.23.1-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.24.2_all.deb ... Unpacking debhelper (13.24.2) ... Selecting previously unselected package libmarkdown2:armhf. Preparing to unpack .../29-libmarkdown2_2.2.7-2.1_armhf.deb ... Unpacking libmarkdown2:armhf (2.2.7-2.1) ... Selecting previously unselected package discount. Preparing to unpack .../30-discount_2.2.7-2.1_armhf.deb ... Unpacking discount (2.2.7-2.1) ... Selecting previously unselected package googletest. Preparing to unpack .../31-googletest_1.16.0-1_all.deb ... Unpacking googletest (1.16.0-1) ... Selecting previously unselected package libbz2-dev:armhf. Preparing to unpack .../32-libbz2-dev_1.0.8-6_armhf.deb ... Unpacking libbz2-dev:armhf (1.0.8-6) ... Selecting previously unselected package libgtest-dev:armhf. Preparing to unpack .../33-libgtest-dev_1.16.0-1_armhf.deb ... Unpacking libgtest-dev:armhf (1.16.0-1) ... Selecting previously unselected package zlib1g-dev:armhf. Preparing to unpack .../34-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_armhf.deb ... Unpacking zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libpipeline1:armhf (1.5.8-1) ... Setting up bsdextrautils (2.41-4) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.2) ... Setting up libmagic1t64:armhf (1:5.46-5) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-7) ... Setting up file (1:5.46-5) ... Setting up googletest (1.16.0-1) ... Setting up libelf1t64:armhf (0.192-4) ... Setting up autotools-dev (20240727.1) ... Setting up libunistring5:armhf (1.3-2) ... Setting up autopoint (0.23.1-1) ... Setting up autoconf (2.72-3) ... Setting up zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up dwz (0.15-1+b2) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:armhf (0.0.8-1+b2) ... Setting up libxml2:armhf (2.12.7+dfsg+really2.9.14-0.4) ... Setting up libmarkdown2:armhf (2.2.7-2.1) ... Setting up libbz2-dev:armhf (1.0.8-6) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-1) ... Setting up libgtest-dev:armhf (1.16.0-1) ... Setting up libtool (2.5.4-4) ... Setting up discount (2.2.7-2.1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-7) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.24.2) ... Processing triggers for libc-bin (2.41-6) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/adapterremoval-2.3.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../adapterremoval_2.3.4-1_source.changes dpkg-buildpackage: info: source package adapterremoval dpkg-buildpackage: info: source version 2.3.4-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_auto_clean make -j3 clean make[1]: Entering directory '/build/reproducible-path/adapterremoval-2.3.4' Building AdapterRemoval with coverage instrumentation: no Building AdapterRemoval with debug information: no Cleaning tests ... Cleaning documentation ... Cleaning ... make[2]: Entering directory '/build/reproducible-path/adapterremoval-2.3.4/examples' rm -f output_* make[2]: Leaving directory '/build/reproducible-path/adapterremoval-2.3.4/examples' make[1]: Leaving directory '/build/reproducible-path/adapterremoval-2.3.4' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/adapterremoval-2.3.4' dh_auto_build make -j3 "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/adapterremoval-2.3.4' Building AdapterRemoval with coverage instrumentation: no Building AdapterRemoval with debug information: no Building build/main/adapterset.o from src/adapterset.cpp Building build/main/alignment.o from src/alignment.cpp Building build/main/alignment_tables.o from src/alignment_tables.cpp Building build/main/argparse.o from src/argparse.cpp src/alignment.cpp:66:2: warning: #warning SEE optimizations disabled! [-Wcpp] 66 | #warning SEE optimizations disabled! | ^~~~~~~ Building build/main/barcode_table.o from src/barcode_table.cpp Building build/main/debug.o from src/debug.cpp Building build/main/demultiplex.o from src/demultiplex.cpp Building build/main/fastq.o from src/fastq.cpp Building build/main/fastq_enc.o from src/fastq_enc.cpp Building build/main/fastq_io.o from src/fastq_io.cpp Building build/main/linereader.o from src/linereader.cpp Building build/main/linereader_joined.o from src/linereader_joined.cpp Building build/main/main_adapter_id.o from src/main_adapter_id.cpp Building build/main/main_adapter_rm.o from src/main_adapter_rm.cpp Building build/main/main_demultiplex.o from src/main_demultiplex.cpp Building build/main/managed_writer.o from src/managed_writer.cpp Building build/main/scheduler.o from src/scheduler.cpp Building build/main/strutils.o from src/strutils.cpp Building build/main/threads.o from src/threads.cpp Building build/main/timer.o from src/timer.cpp Building build/main/trimmed_reads.o from src/trimmed_reads.cpp Building build/main/userconfig.o from src/userconfig.cpp Building build/main/main.o from src/main.cpp Linking executable build/AdapterRemoval make[2]: Leaving directory '/build/reproducible-path/adapterremoval-2.3.4' markdown README.md > README.html make[1]: Leaving directory '/build/reproducible-path/adapterremoval-2.3.4' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/adapterremoval-2.3.4' # dh_auto_test make test make[2]: Entering directory '/build/reproducible-path/adapterremoval-2.3.4' Building AdapterRemoval with coverage instrumentation: no Building AdapterRemoval with debug information: no Building build/tests/main_test.o from tests/unit/main_test.cpp Building build/tests/debug.o from src/debug.cpp Building build/tests/alignment.o from src/alignment.cpp src/alignment.cpp:66:2: warning: #warning SEE optimizations disabled! [-Wcpp] 66 | #warning SEE optimizations disabled! | ^~~~~~~ Building build/tests/alignment_tables.o from src/alignment_tables.cpp Building build/tests/alignment_test.o from tests/unit/alignment_test.cpp Building build/tests/argparse.o from src/argparse.cpp Building build/tests/argparse_test.o from tests/unit/argparse_test.cpp Building build/tests/barcodes_test.o from tests/unit/barcodes_test.cpp Building build/tests/barcode_table.o from src/barcode_table.cpp Building build/tests/fastq.o from src/fastq.cpp Building build/tests/fastq_test.o from tests/unit/fastq_test.cpp Building build/tests/fastq_enc.o from src/fastq_enc.cpp Building build/tests/fastq_enc_test.o from tests/unit/fastq_enc_test.cpp Building build/tests/strutils.o from src/strutils.cpp Building build/tests/strutils_test.o from tests/unit/strutils_test.cpp Linking executable build/tests/main Running unit tests =============================================================================== All tests passed (827 assertions in 268 test cases) make[2]: Leaving directory '/build/reproducible-path/adapterremoval-2.3.4' make clean_tests make[2]: Entering directory '/build/reproducible-path/adapterremoval-2.3.4' Building AdapterRemoval with coverage instrumentation: no Building AdapterRemoval with debug information: no Cleaning tests ... removed 'build/tests/alignment_tables.deps' removed 'build/tests/fastq_enc.o' removed 'build/tests/strutils_test.o' removed 'build/tests/barcode_table.o' removed 'build/tests/debug.deps' removed 'build/tests/main' removed 'build/tests/argparse.o' removed 'build/tests/alignment.deps' removed 'build/tests/barcodes_test.deps' removed 'build/tests/fastq_enc.deps' removed 'build/tests/barcodes_test.o' removed 'build/tests/alignment_test.o' removed 'build/tests/alignment_test.deps' removed 'build/tests/alignment.o' removed 'build/tests/fastq.o' removed 'build/tests/main_test.o' removed 'build/tests/fastq_test.o' removed 'build/tests/strutils.o' removed 'build/tests/barcode_table.deps' removed 'build/tests/strutils.deps' removed 'build/tests/fastq.deps' removed 'build/tests/alignment_tables.o' removed 'build/tests/fastq_enc_test.deps' removed 'build/tests/argparse_test.o' removed 'build/tests/fastq_enc_test.o' removed 'build/tests/fastq_test.deps' removed 'build/tests/argparse.deps' removed 'build/tests/strutils_test.deps' removed 'build/tests/main_test.deps' removed 'build/tests/argparse_test.deps' removed 'build/tests/debug.o' removed directory 'build/tests' make[2]: Leaving directory '/build/reproducible-path/adapterremoval-2.3.4' make[1]: Leaving directory '/build/reproducible-path/adapterremoval-2.3.4' create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/adapterremoval-2.3.4' make PREFIX=/build/reproducible-path/adapterremoval-2.3.4/debian/adapterremoval/usr make[2]: Entering directory '/build/reproducible-path/adapterremoval-2.3.4' Building AdapterRemoval with coverage instrumentation: no Building AdapterRemoval with debug information: no make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/build/reproducible-path/adapterremoval-2.3.4' # Hmmm, this does nothing ... make[1]: Leaving directory '/build/reproducible-path/adapterremoval-2.3.4' dh_install dh_installdocs debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/adapterremoval-2.3.4' dh_installchangelogs CHANGES.md make[1]: Leaving directory '/build/reproducible-path/adapterremoval-2.3.4' dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress debian/rules override_dh_fixperms make[1]: Entering directory '/build/reproducible-path/adapterremoval-2.3.4' dh_fixperms find debian -name benchmark.sh -exec chmod +x \{\} \; make[1]: Leaving directory '/build/reproducible-path/adapterremoval-2.3.4' dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dpkg-shlibdeps: warning: debian/adapterremoval/usr/bin/AdapterRemoval contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'adapterremoval-dbgsym' in '../adapterremoval-dbgsym_2.3.4-1_armhf.deb'. dpkg-deb: building package 'adapterremoval' in '../adapterremoval_2.3.4-1_armhf.deb'. dpkg-deb: building package 'adapterremoval-examples' in '../adapterremoval-examples_2.3.4-1_all.deb'. dpkg-genbuildinfo --build=binary -O../adapterremoval_2.3.4-1_armhf.buildinfo dpkg-genchanges --build=binary -O../adapterremoval_2.3.4-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/28067 and its subdirectories I: Current time: Sun Apr 13 09:43:50 -12 2025 I: pbuilder-time-stamp: 1744580630